AlfalfaGEDB | MsG0380016589.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016589.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016589.01.T01	XP_024634007.1	73.077	182	0	1	1	133	236	417	1.09E-79	262

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016589.01.T01	G7J884	73.077	182	0	1	1	133	236	417	5.21e-80	262

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047793.01	MsG0380016589.01	0.818745	1.670032e-52	1.260692e-49
MsG0080048374.01	MsG0380016589.01	0.902818	6.570072e-79	9.472590e-75
MsG0080048602.01	MsG0380016589.01	0.841604	4.295459e-58	6.344915e-55
MsG0180000146.01	MsG0380016589.01	0.861720	8.410978e-64	2.401952e-60
MsG0180000741.01	MsG0380016589.01	0.807574	4.729941e-50	2.643668e-47
MsG0180001315.01	MsG0380016589.01	0.802559	5.297259e-49	2.602771e-46
MsG0180002074.01	MsG0380016589.01	0.802448	5.583852e-49	2.735932e-46
MsG0180003303.01	MsG0380016589.01	0.844370	7.884225e-59	1.270052e-55
MsG0180003799.01	MsG0380016589.01	0.847069	1.459823e-59	2.564374e-56
MsG0180003937.01	MsG0380016589.01	0.804060	2.589366e-49	1.322238e-46
MsG0180004139.01	MsG0380016589.01	0.821473	3.962611e-53	3.226898e-50
MsG0180004383.01	MsG0380016589.01	0.886845	2.397871e-72	1.740913e-68
MsG0180004437.01	MsG0380016589.01	0.824469	7.935022e-54	7.034533e-51
MsG0180004598.01	MsG0380016589.01	0.846958	1.565511e-59	2.740165e-56
MsG0180004645.01	MsG0380016589.01	0.825907	3.629455e-54	3.352815e-51
MsG0180004872.01	MsG0380016589.01	0.815287	9.987933e-52	6.857876e-49
MsG0180004989.01	MsG0380016589.01	0.821011	5.064787e-53	4.072323e-50
MsG0180005504.01	MsG0380016589.01	0.818781	1.639035e-52	1.238549e-49
MsG0180005985.01	MsG0380016589.01	0.893805	4.461978e-75	4.319878e-71
MsG0280006304.01	MsG0380016589.01	0.896760	2.707479e-76	2.969506e-72
MsG0280006367.01	MsG0380016589.01	0.805993	1.020804e-49	5.478319e-47
MsG0280006432.01	MsG0380016589.01	0.805930	1.052173e-49	5.637471e-47
MsG0280010563.01	MsG0380016589.01	0.824932	6.174774e-54	5.547961e-51
MsG0280010735.01	MsG0380016589.01	0.834696	2.581152e-56	3.086350e-53
MsG0280010866.01	MsG0380016589.01	0.863673	2.105280e-64	6.435200e-61
MsG0280010932.01	MsG0380016589.01	0.837866	4.035737e-57	5.312061e-54
MsG0280011056.01	MsG0380016589.01	0.815429	9.288563e-52	6.402430e-49
MsG0280011075.01	MsG0380016589.01	0.882410	1.066626e-70	6.489597e-67
MsG0280011085.01	MsG0380016589.01	0.854225	1.417886e-61	3.144940e-58
MsG0380014138.01	MsG0380016589.01	0.806765	7.016079e-50	3.840128e-47
MsG0380014576.01	MsG0380016589.01	0.812590	3.926695e-51	2.506728e-48
MsG0380015495.01	MsG0380016589.01	0.816560	5.192587e-52	3.691628e-49
MsG0380015607.01	MsG0380016589.01	0.801103	1.054498e-48	4.993786e-46
MsG0380015639.01	MsG0380016589.01	0.809812	1.572595e-50	9.325283e-48
MsG0380016589.01	MsG0380017045.01	0.811401	7.130367e-51	4.409619e-48
MsG0380016589.01	MsG0380017410.01	0.820234	7.639276e-53	6.010290e-50
MsG0380016589.01	MsG0480018256.01	0.822393	2.426972e-53	2.028901e-50
MsG0380016589.01	MsG0480018311.01	0.800044	1.733539e-48	7.991416e-46
MsG0380016589.01	MsG0480018467.01	0.837928	3.891007e-57	5.131146e-54
MsG0380016589.01	MsG0480019170.01	0.802380	5.766944e-49	2.820898e-46
MsG0380016589.01	MsG0480019395.01	0.814895	1.220322e-51	8.289410e-49
MsG0380016589.01	MsG0480021216.01	0.901225	3.323950e-78	4.447465e-74
MsG0380016589.01	MsG0480021914.01	0.814758	1.308892e-51	8.858373e-49
MsG0380016589.01	MsG0480022317.01	0.871204	8.167341e-67	3.266780e-63
MsG0380016589.01	MsG0480022398.01	0.831711	1.429470e-55	1.564045e-52
MsG0380016589.01	MsG0480022464.01	0.802668	5.029070e-49	2.477915e-46
MsG0380016589.01	MsG0480022552.01	0.836748	7.803057e-57	9.925778e-54
MsG0380016589.01	MsG0480022710.01	0.808096	3.663573e-50	2.076005e-47
MsG0380016589.01	MsG0480022719.01	0.859622	3.640992e-63	9.676493e-60
MsG0380016589.01	MsG0480023609.01	0.814725	1.330940e-51	9.000074e-49
MsG0380016589.01	MsG0580024311.01	0.800301	1.537179e-48	7.132901e-46
MsG0380016589.01	MsG0580024770.01	0.838865	2.230562e-57	3.026742e-54
MsG0380016589.01	MsG0580024959.01	0.872590	2.830507e-67	1.191136e-63
MsG0380016589.01	MsG0580025128.01	0.893712	4.869062e-75	4.693411e-71
MsG0380016589.01	MsG0580029007.01	0.827272	1.714758e-54	1.647512e-51
MsG0380016589.01	MsG0580029036.01	0.846185	2.545589e-59	4.345436e-56
MsG0380016589.01	MsG0580029371.01	0.834192	3.453918e-56	4.068272e-53
MsG0380016589.01	MsG0580029540.01	0.805039	1.618390e-49	8.474621e-47
MsG0380016589.01	MsG0580030100.01	0.864617	1.068774e-64	3.377252e-61
MsG0380016589.01	MsG0680030684.01	0.802546	5.329482e-49	2.617814e-46
MsG0380016589.01	MsG0680031063.01	0.838705	2.453425e-57	3.313235e-54
MsG0380016589.01	MsG0680035874.01	0.831544	1.571842e-55	1.711252e-52
MsG0380016589.01	MsG0780035936.01	0.846733	1.804381e-59	3.135621e-56
MsG0380016589.01	MsG0780037755.01	0.802747	4.845301e-49	2.392275e-46
MsG0380016589.01	MsG0780038422.01	0.804010	2.652588e-49	1.352735e-46
MsG0380016589.01	MsG0780039530.01	0.865631	5.133192e-65	1.681889e-61
MsG0380016589.01	MsG0780039587.01	0.814772	1.299673e-51	8.799046e-49
MsG0380016589.01	MsG0780040027.01	0.817197	3.735489e-52	2.702420e-49
MsG0380016589.01	MsG0780040180.01	0.804161	2.467355e-49	1.263143e-46
MsG0380016589.01	MsG0780040687.01	0.868853	4.794707e-66	1.760961e-62
MsG0380016589.01	MsG0780040742.01	0.801832	7.475145e-49	3.605652e-46
MsG0380016589.01	MsG0780040854.01	0.829242	5.745064e-55	5.846662e-52
MsG0380016589.01	MsG0780040856.01	0.805920	1.057318e-49	5.663586e-47
MsG0380016589.01	MsG0780041183.01	0.843213	1.608662e-58	2.498938e-55
MsG0380016589.01	MsG0780041310.01	0.816226	6.166974e-52	4.344646e-49
MsG0380016589.01	MsG0780041371.01	0.836853	7.333599e-57	9.357922e-54
MsG0380016589.01	MsG0880042206.01	0.806881	6.631358e-50	3.640535e-47
MsG0380016589.01	MsG0880042329.01	0.809782	1.596313e-50	9.458727e-48
MsG0380016589.01	MsG0880042838.01	0.908252	2.093665e-81	3.853611e-77
MsG0380016589.01	MsG0880042983.01	0.802518	5.400045e-49	2.650510e-46
MsG0380016589.01	MsG0880043533.01	0.808654	2.784403e-50	1.600981e-47
MsG0380016589.01	MsG0880045165.01	0.829413	5.220491e-55	5.339301e-52
MsG0380016589.01	MsG0880045769.01	0.805707	1.171999e-49	6.244031e-47
MsG0380016589.01	MsG0880045841.01	0.891391	4.147372e-74	3.629398e-70
MsG0380016589.01	MsG0880046100.01	0.813558	2.409062e-51	1.578352e-48
MsG0380016589.01	MsG0880046206.01	0.841913	3.560997e-58	5.310437e-55
MsG0380016589.01	MsG0880046556.01	0.814309	1.645110e-51	1.100065e-48
MsG0380016589.01	MsG0880046893.01	0.817777	2.765852e-52	2.033074e-49
MsG0380016589.01	MsG0880047289.01	0.847622	1.029214e-59	1.840122e-56
MsG0380016589.01	MsG0880047293.01	0.814671	1.368213e-51	9.238332e-49
MsG0280007048.01	MsG0380016589.01	0.809875	1.524295e-50	9.053692e-48
MsG0280007087.01	MsG0380016589.01	0.813807	2.123171e-51	1.400489e-48
MsG0280007726.01	MsG0380016589.01	0.869724	2.497933e-66	9.469226e-63
MsG0280007819.01	MsG0380016589.01	0.807981	3.876106e-50	2.189692e-47
MsG0280007830.01	MsG0380016589.01	0.819624	1.053090e-52	8.145677e-50
MsG0280008134.01	MsG0380016589.01	0.821995	3.001802e-53	2.480823e-50
MsG0280009386.01	MsG0380016589.01	0.869039	4.172546e-66	1.543121e-62
MsG0280009462.01	MsG0380016589.01	0.839175	1.853982e-57	2.539578e-54
MsG0280009774.01	MsG0380016589.01	0.817284	3.572142e-52	2.590358e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016589.01.T01	MTR_3g092250	73.077	182	1	1	133	236	417	1.32e-83	262
MsG0380016589.01.T01	MTR_3g092250	73.077	182	1	1	133	234	415	1.42e-83	262
MsG0380016589.01.T01	MTR_3g092250	73.077	182	1	1	133	234	415	1.42e-83	262

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016589.01.T01	AT5G53620	35.417	192	74	4	1	145	224	412	1.31e-30	116
MsG0380016589.01.T01	AT5G53620	35.417	192	74	4	1	145	224	412	1.31e-30	116
MsG0380016589.01.T01	AT5G53620	35.417	192	74	4	1	145	224	412	1.31e-30	116

Find 100 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAAAGAACTAGCATCTTTC+AGG	0.200494	3:+85410104	MsG0380016589.01.T01:five_prime_UTR
TTCTTCTTCTTTCAATTTCT+AGG	0.218889	3:+85408303	MsG0380016589.01.T01:five_prime_UTR
ATTAGAATGAAATGAGAAAA+AGG	0.231067	3:-85408251	None:intergenic
TCATGAGCTGGAAAGGAAAA+TGG	0.284608	3:+85409910	MsG0380016589.01.T01:five_prime_UTR
TTCTTTCAATTTCTAGGGTT+AGG	0.294139	3:+85408309	MsG0380016589.01.T01:five_prime_UTR
GGCGGCAGCTGCGGCGGCCG+TGG	0.300977	3:-85408396	None:intergenic
GCCGCGAGCGGCGGCAGCTG+CGG	0.315055	3:-85408405	None:intergenic
GCTCCATATGGACAGGAAAA+TGG	0.319658	3:+85410999	MsG0380016589.01.T01:intron
TTCTGGCAATCCGTCAATTC+AGG	0.336564	3:+85411115	MsG0380016589.01.T01:CDS
GGAAATCAATTTGACTTGAA+TGG	0.341809	3:+85411020	MsG0380016589.01.T01:CDS
TCTTTCAATTTCTAGGGTTA+GGG	0.347336	3:+85408310	MsG0380016589.01.T01:five_prime_UTR
GGAAAATGGAAGAGAAAGAC+AGG	0.355765	3:+85409924	MsG0380016589.01.T01:five_prime_UTR
TCGTCCGATTGCCCAAGTTT+TGG	0.366737	3:-85409197	None:intergenic
TATCTGAGTTCTCATTTGTA+AGG	0.370158	3:-85411073	None:intergenic
TAGACAACTTATTGAGTTGC+AGG	0.371209	3:+85410298	MsG0380016589.01.T01:five_prime_UTR
ATGACTGGTTTGTTGTTGAT+TGG	0.378714	3:-85410505	None:intergenic
CGCCTTTGACTAACAGCATA+AGG	0.387415	3:-85409404	None:intergenic
GAATATACACCTGAACTTGC+TGG	0.390463	3:-85409537	None:intergenic
AATGCTTCAGGTGGAAATAC+TGG	0.392132	3:+85411047	MsG0380016589.01.T01:CDS
CAAATCAGTACCTCATCGTC+AGG	0.395061	3:-85408502	None:intergenic
GGATTGCCAGAAGTTGAAAA+TGG	0.399649	3:-85411104	None:intergenic
AACAACAAACCAGTCATTAC+AGG	0.401306	3:+85410511	MsG0380016589.01.T01:CDS
TTGAATGGAGGCAATGCTTC+AGG	0.408367	3:+85411035	MsG0380016589.01.T01:CDS
TCTTCTTCTTTCAATTTCTA+GGG	0.410245	3:+85408304	MsG0380016589.01.T01:five_prime_UTR
CTCCTTCAGTTGAGCCTCAT+AGG	0.416295	3:-85409501	None:intergenic
CTAACAATGCCAGCAAGTTC+AGG	0.423362	3:+85409528	MsG0380016589.01.T01:five_prime_UTR
CCAGGTGGAAGGTACGGGTG+GGG	0.426365	3:-85412340	None:intergenic
GACATGTGATGCAACAGAAT+TGG	0.427457	3:-85412409	None:intergenic
GCCGCAGCTGCCGCCGCTCG+CGG	0.427900	3:+85408404	MsG0380016589.01.T01:five_prime_UTR
GCGAGCGGCGGCAGCTGCGG+CGG	0.433380	3:-85408402	None:intergenic
CAGGTGGAAGGTACGGGTGG+GGG	0.434721	3:-85412339	None:intergenic
ACAAATGAGAACTCAGATAA+TGG	0.438171	3:+85411077	MsG0380016589.01.T01:CDS
ACTTATTGAGTTGCAGGAAC+AGG	0.445679	3:+85410304	MsG0380016589.01.T01:five_prime_UTR
GACCAGGTGGAAGGTACGGG+TGG	0.446434	3:-85412342	None:intergenic
AAAACCAAAACTTGGGCAAT+CGG	0.452222	3:+85409193	MsG0380016589.01.T01:five_prime_UTR
AAGCACTGCACCTGAATTGA+CGG	0.472312	3:-85411125	None:intergenic
ATCGAACAAAATCAACATCC+AGG	0.481939	3:-85409336	None:intergenic
GCAGGAGCAACTTTGTGAAA+GGG	0.489778	3:+85409877	MsG0380016589.01.T01:intron
TGCAGGAGCAACTTTGTGAA+AGG	0.492922	3:+85409876	MsG0380016589.01.T01:intron
CAGTCGACGGTGCCCCAGAA+GGG	0.493131	3:-85408356	None:intergenic
GAGAGCAACGCCGCGAGCGG+CGG	0.496553	3:-85408414	None:intergenic
GCAGCAAGGAAGAGAGCCCC+TGG	0.498790	3:+85409318	MsG0380016589.01.T01:intron
GGAGACAATTATGTTTAAAG+AGG	0.500846	3:+85410427	MsG0380016589.01.T01:exon
GCAATTCAGCCTGTAATGAC+TGG	0.500979	3:-85410520	None:intergenic
GGAGTTAGAAAACCAAAACT+TGG	0.502262	3:+85409185	MsG0380016589.01.T01:intron
ACTTGACCAGGTGGAAGGTA+CGG	0.510432	3:-85412346	None:intergenic
AGACTCCGCCACGGAAAGAA+TGG	0.511259	3:+85408443	MsG0380016589.01.T01:five_prime_UTR
CGGAACAATATAATCAGCTA+TGG	0.522814	3:+85410552	MsG0380016589.01.T01:CDS
CCTTGTTGATGCATAACAAA+TGG	0.523921	3:-85412382	None:intergenic
GGAGCGTGCAATTCATGAGC+TGG	0.524709	3:+85409898	MsG0380016589.01.T01:five_prime_UTR
ATGGATGAATGTACAGAGAC+AGG	0.526725	3:+85410571	MsG0380016589.01.T01:CDS
ACTGAGAGCAACGCCGCGAG+CGG	0.536582	3:-85408417	None:intergenic
GTGCAATTCATGAGCTGGAA+AGG	0.537916	3:+85409903	MsG0380016589.01.T01:five_prime_UTR
TGGTTGTGGCGAATTTCGAC+CGG	0.538315	3:-85408208	None:intergenic
TGGTGAAAGATGATTGGTTG+TGG	0.539553	3:-85408222	None:intergenic
TTTCAGACTGATCATACTCA+TGG	0.539619	3:+85412286	MsG0380016589.01.T01:intron
CTTGACCAGGTGGAAGGTAC+GGG	0.540110	3:-85412345	None:intergenic
GGCTGAATTGCGAGAGCGCA+CGG	0.541435	3:+85410532	MsG0380016589.01.T01:CDS
ACAGTCGACGGTGCCCCAGA+AGG	0.542256	3:-85408357	None:intergenic
ATAGTTGACATTGTGGGCAC+TGG	0.543703	3:-85412459	None:intergenic
GGACGAGAGAACTATATATG+AGG	0.546394	3:+85409214	MsG0380016589.01.T01:five_prime_UTR
AAGGCGTGAAATACTTCAGA+TGG	0.547959	3:+85409421	MsG0380016589.01.T01:five_prime_UTR
GAAAATGCGAAACACCTATG+AGG	0.551985	3:+85409487	MsG0380016589.01.T01:five_prime_UTR
CCCCACCCGTACCTTCCACC+TGG	0.556388	3:+85412340	MsG0380016589.01.T01:CDS
TCTTTCAGAATAGGGTGCGC+AGG	0.556545	3:+85410406	MsG0380016589.01.T01:intron
ACCAGGTGGAAGGTACGGGT+GGG	0.566314	3:-85412341	None:intergenic
GTGGCGAATTTCGACCGGCA+CGG	0.567729	3:-85408203	None:intergenic
CACCTATGAGGCTCAACTGA+AGG	0.573626	3:+85409499	MsG0380016589.01.T01:five_prime_UTR
GATAACCCGTGTTCGTGAGA+TGG	0.574776	3:+85410475	MsG0380016589.01.T01:CDS
AATCAATTTGACTTGAATGG+AGG	0.575465	3:+85411023	MsG0380016589.01.T01:CDS
ATCCTTATGCTGTTAGTCAA+AGG	0.584580	3:+85409402	MsG0380016589.01.T01:five_prime_UTR
AACATCCATCTCACGAACAC+GGG	0.585933	3:-85410480	None:intergenic
CTCAGTTGCAGACTCCGCCA+CGG	0.587647	3:+85408434	MsG0380016589.01.T01:five_prime_UTR
TCGAACAAAATCAACATCCA+GGG	0.591148	3:-85409335	None:intergenic
AAACATCCATCTCACGAACA+CGG	0.597650	3:-85410481	None:intergenic
AGTCGACGGTGCCCCAGAAG+GGG	0.597765	3:-85408355	None:intergenic
CATGTCCCTCAGTCTCATGT+TGG	0.599416	3:+85412426	MsG0380016589.01.T01:CDS
TGTTGCATAGTTGACATTGT+GGG	0.606112	3:-85412465	None:intergenic
ACAGCACGCCATTCTTTCCG+TGG	0.608002	3:-85408451	None:intergenic
TGCAATGCAGTAACTTGACC+AGG	0.616534	3:-85412358	None:intergenic
CAGTAACTTGACCAGGTGGA+AGG	0.617894	3:-85412351	None:intergenic
TAAAGAGGAACAGATTAGAG+AGG	0.618492	3:+85410442	MsG0380016589.01.T01:CDS
AGATTAGAGAGGCTCAAGCA+TGG	0.618985	3:+85410453	MsG0380016589.01.T01:CDS
GAGTTAGAAAACCAAAACTT+GGG	0.620043	3:+85409186	MsG0380016589.01.T01:five_prime_UTR
CCATTTGTTATGCATCAACA+AGG	0.623637	3:+85412382	MsG0380016589.01.T01:CDS
AATGGAGGCAATGCTTCAGG+TGG	0.637332	3:+85411038	MsG0380016589.01.T01:CDS
TGCGAGAAACCCTGACGATG+AGG	0.637451	3:+85408492	MsG0380016589.01.T01:five_prime_UTR
CTGTTGCATAGTTGACATTG+TGG	0.652001	3:-85412466	None:intergenic
GGAGCGTGATCATTCAGAAG+CGG	0.658990	3:+85410217	MsG0380016589.01.T01:five_prime_UTR
AATTAAACTAGATAATGAAG+CGG	0.660456	3:+85409958	MsG0380016589.01.T01:five_prime_UTR
CAATGTCAACTATGCAACAG+TGG	0.661238	3:+85412469	MsG0380016589.01.T01:CDS
TTGCCAGAAGTTGAAAATGG+AGG	0.661903	3:-85411101	None:intergenic
GAAAATGGAAGAGAAAGACA+GGG	0.665029	3:+85409925	MsG0380016589.01.T01:five_prime_UTR
CATAAAACAACAACAGTCGA+CGG	0.665592	3:-85408369	None:intergenic
AATGTCCAACATGAGACTGA+GGG	0.667680	3:-85412431	None:intergenic
AAATCAGTACCTCATCGTCA+GGG	0.668873	3:-85408501	None:intergenic
CGAACAAAATCAACATCCAG+GGG	0.676178	3:-85409334	None:intergenic
AAATGTCCAACATGAGACTG+AGG	0.680087	3:-85412432	None:intergenic
GCACGCCATTCTTTCCGTGG+CGG	0.681342	3:-85408448	None:intergenic
AATGCAGTAACTTGACCAGG+TGG	0.756788	3:-85412355	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTAATTCCTTATTAAT+AGG	-	Chr3:85412026-85412045	None:intergenic	10.0%
!!	AAATTAATTCCTTATTAATA+GGG	-	Chr3:85412025-85412044	None:intergenic	10.0%
!!	CAACAAAAAAAATAAAATTA+AGG	-	Chr3:85409107-85409126	None:intergenic	10.0%
!!	AAAAAACAAGAAAAAAAACT+CGG	-	Chr3:85408585-85408604	None:intergenic	15.0%
!!	ATTGAATATCTATTTCAAAA+CGG	-	Chr3:85410687-85410706	None:intergenic	15.0%
!!	TTCTAATCTAAATTACAATT+TGG	-	Chr3:85408866-85408885	None:intergenic	15.0%
!!!	AAAGATTATAATTTTACTGT+CGG	+	Chr3:85408799-85408818	MsG0380016589.01.T01:intron	15.0%
!!!	ATCTATAACTTCTAAAAAAT+TGG	+	Chr3:85409600-85409619	MsG0380016589.01.T01:intron	15.0%
!!!	TTAACTTTATACTTGTTTTT+TGG	+	Chr3:85410836-85410855	MsG0380016589.01.T01:intron	15.0%
!!!	TTTTAAAAAAACTGTTTATC+TGG	+	Chr3:85409848-85409867	MsG0380016589.01.T01:intron	15.0%
!!!	TTTTTCTTGTTTTTTGAAAT+TGG	+	Chr3:85408590-85408609	MsG0380016589.01.T01:intron	15.0%
!!	AATTAAACTAGATAATGAAG+CGG	+	Chr3:85409958-85409977	MsG0380016589.01.T01:five_prime_UTR	20.0%
!!	ACATAACTATTATATTCTGA+TGG	+	Chr3:85409738-85409757	MsG0380016589.01.T01:intron	20.0%
!!	ATCTCTTCAATTATTTCATT+AGG	+	Chr3:85410050-85410069	MsG0380016589.01.T01:intron	20.0%
!!	ATGTACTATTAATTAACATC+CGG	-	Chr3:85411989-85412008	None:intergenic	20.0%
!!	ATTAGAATGAAATGAGAAAA+AGG	-	Chr3:85408254-85408273	None:intergenic	20.0%
!!	CATGTCATTACTTAAAATAA+TGG	+	Chr3:85410803-85410822	MsG0380016589.01.T01:intron	20.0%
!!	TAAAATTGTTATAATCTCCT+AGG	-	Chr3:85409691-85409710	None:intergenic	20.0%
!!	TTAGAATGAAATGAGAAAAA+GGG	-	Chr3:85408253-85408272	None:intergenic	20.0%
!!!	GATCTGAACAATTTTATATT+TGG	+	Chr3:85411420-85411439	MsG0380016589.01.T01:intron	20.0%
!!!	GTTTTAGGTATAAAATCAAA+TGG	-	Chr3:85411233-85411252	None:intergenic	20.0%
!!!	TGATCAATACTTTTATTATG+TGG	+	Chr3:85412129-85412148	MsG0380016589.01.T01:intron	20.0%
!	AAATACTAACAATCTTTGCT+CGG	-	Chr3:85409031-85409050	None:intergenic	25.0%
!	AACAGTAAAGAGATTATCTT+CGG	-	Chr3:85409289-85409308	None:intergenic	25.0%
!	AATCGATGTCATATGATATT+TGG	+	Chr3:85408773-85408792	MsG0380016589.01.T01:intron	25.0%
!	ACGGTAAGTTATCAAATATT+CGG	-	Chr3:85409059-85409078	None:intergenic	25.0%
!	ATTATATTCTGATGGCTTAA+AGG	+	Chr3:85409746-85409765	MsG0380016589.01.T01:intron	25.0%
!	ATTTATGAGGATAAAACTGA+TGG	+	Chr3:85411781-85411800	MsG0380016589.01.T01:intron	25.0%
!	CAAACATTCTATACGTATAT+TGG	+	Chr3:85409559-85409578	MsG0380016589.01.T01:intron	25.0%
!	CAATTAAGCATCTAAAAGTT+TGG	-	Chr3:85409654-85409673	None:intergenic	25.0%
!	GCTGTTGATATTTCATTAAA+TGG	+	Chr3:85411471-85411490	MsG0380016589.01.T01:intron	25.0%
!	GTCATTACTTAAAATAATGG+TGG	+	Chr3:85410806-85410825	MsG0380016589.01.T01:intron	25.0%
!	TAAACCCTATCATCATAAAA+TGG	-	Chr3:85408676-85408695	None:intergenic	25.0%
!	TCTTCTTCTTTCAATTTCTA+GGG	+	Chr3:85408304-85408323	MsG0380016589.01.T01:five_prime_UTR	25.0%
!	TTAAAGGAGTTAAGAGTTAA+AGG	-	Chr3:85411884-85411903	None:intergenic	25.0%
!	TTATATTCTGATGGCTTAAA+GGG	+	Chr3:85409747-85409766	MsG0380016589.01.T01:intron	25.0%
!	TTCTTCTTCTTTCAATTTCT+AGG	+	Chr3:85408303-85408322	MsG0380016589.01.T01:five_prime_UTR	25.0%
!	TTTAGTGACACAAAATAGTA+TGG	+	Chr3:85409707-85409726	MsG0380016589.01.T01:intron	25.0%
!!	AATTTTGTATTCACTTCAAG+AGG	-	Chr3:85411512-85411531	None:intergenic	25.0%
!!	CATTACATGTATTGCATTTT+CGG	-	Chr3:85411694-85411713	None:intergenic	25.0%
!!	CTTAAAAGTACAGTAACTTA+AGG	-	Chr3:85409782-85409801	None:intergenic	25.0%
!!	GTTACCATTTTATGATGATA+GGG	+	Chr3:85408669-85408688	MsG0380016589.01.T01:intron	25.0%
!!	TAACTATCTTATTTCGGTTT+CGG	+	Chr3:85409997-85410016	MsG0380016589.01.T01:intron	25.0%
!!!	AAAAATTGTCCCTTGTTATT+AGG	+	Chr3:85412086-85412105	MsG0380016589.01.T01:intron	25.0%
!!!	AAAGCATCGCATAATAAATA+TGG	-	Chr3:85410142-85410161	None:intergenic	25.0%
!!!	AAATGAGAAAAAGGGTTTTT+TGG	-	Chr3:85408245-85408264	None:intergenic	25.0%
!!!	AAGTATTGATCAAAGTCAAA+AGG	-	Chr3:85412121-85412140	None:intergenic	25.0%
!!!	AATCTCTTTACTGTTTTTCA+AGG	+	Chr3:85409294-85409313	MsG0380016589.01.T01:intron	25.0%
!!!	ACTTTATACTTGTTTTTTGG+TGG	+	Chr3:85410839-85410858	MsG0380016589.01.T01:intron	25.0%
!!!	TATCATATGACATCGATTTT+CGG	-	Chr3:85408771-85408790	None:intergenic	25.0%
	AAACAGAGACACAAATACAA+AGG	-	Chr3:85410661-85410680	None:intergenic	30.0%
	AAAGGACATACAATATAGTG+GGG	-	Chr3:85410643-85410662	None:intergenic	30.0%
	AACCACAACAGTATTGTAAA+TGG	-	Chr3:85412264-85412283	None:intergenic	30.0%
	ACAAAGGACATACAATATAG+TGG	-	Chr3:85410645-85410664	None:intergenic	30.0%
	ACAAATGAGAACTCAGATAA+TGG	+	Chr3:85411077-85411096	MsG0380016589.01.T01:CDS	30.0%
	ACAGTAAAGAGATTATCTTC+GGG	-	Chr3:85409288-85409307	None:intergenic	30.0%
	ACCACAACAGTATTGTAAAT+GGG	-	Chr3:85412263-85412282	None:intergenic	30.0%
	ACCGAAATAAGATAGTTAAG+AGG	-	Chr3:85409995-85410014	None:intergenic	30.0%
	AGAGAACTATATATGAGGTA+AGG	+	Chr3:85409219-85409238	MsG0380016589.01.T01:intron	30.0%
	CAAAGGACATACAATATAGT+GGG	-	Chr3:85410644-85410663	None:intergenic	30.0%
	CGAAAATGCAATACATGTAA+TGG	+	Chr3:85411692-85411711	MsG0380016589.01.T01:intron	30.0%
	CTACATTCTTATCTTCTACA+AGG	+	Chr3:85410599-85410618	MsG0380016589.01.T01:intron	30.0%
	CTGATGTTTCTTTCAGAATA+GGG	+	Chr3:85410398-85410417	MsG0380016589.01.T01:intron	30.0%
	GACAGATGAGATAATTTATG+AGG	+	Chr3:85411768-85411787	MsG0380016589.01.T01:intron	30.0%
	GAGTTAGAAAACCAAAACTT+GGG	+	Chr3:85409186-85409205	MsG0380016589.01.T01:five_prime_UTR	30.0%
	GATTGAGATAGTTGTTAAAC+AGG	+	Chr3:85411726-85411745	MsG0380016589.01.T01:intron	30.0%
	GCGTTGCAAATAAAATTTCT+GGG	-	Chr3:85411200-85411219	None:intergenic	30.0%
	GCTGTTAATTGTTATGTGTT+TGG	+	Chr3:85409126-85409145	MsG0380016589.01.T01:intron	30.0%
	GGAGACAATTATGTTTAAAG+AGG	+	Chr3:85410427-85410446	MsG0380016589.01.T01:exon	30.0%
	TATAACCCACCTAATAACAA+GGG	-	Chr3:85412098-85412117	None:intergenic	30.0%
	TATATTCTGATGGCTTAAAG+GGG	+	Chr3:85409748-85409767	MsG0380016589.01.T01:intron	30.0%
	TATATTGGATACTCAAGACT+AGG	+	Chr3:85409574-85409593	MsG0380016589.01.T01:intron	30.0%
	TATCTGAGTTCTCATTTGTA+AGG	-	Chr3:85411076-85411095	None:intergenic	30.0%
	TCAATTATTTCATTAGGCGT+GGG	+	Chr3:85410056-85410075	MsG0380016589.01.T01:intron	30.0%
	TCATAGATTCATAATGACGT+AGG	+	Chr3:85411276-85411295	MsG0380016589.01.T01:intron	30.0%
	TTAAAGTTTATTCGCTTACG+TGG	+	Chr3:85410371-85410390	MsG0380016589.01.T01:intron	30.0%
	TTACATATCCAATGACACAA+CGG	-	Chr3:85409078-85409097	None:intergenic	30.0%
	TTCAATTATTTCATTAGGCG+TGG	+	Chr3:85410055-85410074	MsG0380016589.01.T01:intron	30.0%
!	AACAGGAATGTTGAATCTTT+TGG	+	Chr3:85411743-85411762	MsG0380016589.01.T01:intron	30.0%
!	AACTATCTTATTTCGGTTTC+GGG	+	Chr3:85409998-85410017	MsG0380016589.01.T01:intron	30.0%
!	ATTTTCAATAAACCGACACA+AGG	-	Chr3:85411580-85411599	None:intergenic	30.0%
!	CAGTTCTTTTAGTACAAAAC+CGG	+	Chr3:85411967-85411986	MsG0380016589.01.T01:intron	30.0%
!	GCCTCTTAACTATCTTATTT+CGG	+	Chr3:85409991-85410010	MsG0380016589.01.T01:intron	30.0%
!	GGTTACCATTTTATGATGAT+AGG	+	Chr3:85408668-85408687	MsG0380016589.01.T01:intron	30.0%
!	GTGTCATTGGATATGTAAAA+GGG	+	Chr3:85409080-85409099	MsG0380016589.01.T01:intron	30.0%
!	TCTAAAAAATTGGTTTCCTC+AGG	+	Chr3:85409610-85409629	MsG0380016589.01.T01:intron	30.0%
!	TGTGTCATTGGATATGTAAA+AGG	+	Chr3:85409079-85409098	MsG0380016589.01.T01:intron	30.0%
!	TTCAATAGACATGTTTTGTC+AGG	+	Chr3:85412214-85412233	MsG0380016589.01.T01:intron	30.0%
!	TTGATTTTGTTCGATGACAA+TGG	+	Chr3:85409344-85409363	MsG0380016589.01.T01:five_prime_UTR	30.0%
!!	AATCAATTTGACTTGAATGG+AGG	+	Chr3:85411023-85411042	MsG0380016589.01.T01:CDS	30.0%
!!	ACATCTTCAAGAGTTGTTTT+AGG	-	Chr3:85411248-85411267	None:intergenic	30.0%
!!	CAAAAAAGCACTGCTAAAAA+TGG	-	Chr3:85408699-85408718	None:intergenic	30.0%
!!	GGAAATCAATTTGACTTGAA+TGG	+	Chr3:85411020-85411039	MsG0380016589.01.T01:CDS	30.0%
!!	GTGAGCTTTATATGCATTTT+TGG	+	Chr3:85410765-85410784	MsG0380016589.01.T01:intron	30.0%
!!	TCTATTTATTTTCCCCTTCT+GGG	+	Chr3:85408343-85408362	MsG0380016589.01.T01:five_prime_UTR	30.0%
!!	TCTTTCAATTTCTAGGGTTA+GGG	+	Chr3:85408310-85408329	MsG0380016589.01.T01:five_prime_UTR	30.0%
!!	TTCTATTTATTTTCCCCTTC+TGG	+	Chr3:85408342-85408361	MsG0380016589.01.T01:five_prime_UTR	30.0%
!!	TTCTTTCAATTTCTAGGGTT+AGG	+	Chr3:85408309-85408328	MsG0380016589.01.T01:five_prime_UTR	30.0%
!!	TTGTTGATTAGCTTAGTTTG+AGG	+	Chr3:85409158-85409177	MsG0380016589.01.T01:intron	30.0%
!!!	ACTTTTGCTGTTGAAGTTTA+AGG	+	Chr3:85408967-85408986	MsG0380016589.01.T01:intron	30.0%
!!!	ATTTGGTTTTGGGTGTTTTT+AGG	+	Chr3:85408628-85408647	MsG0380016589.01.T01:intron	30.0%
!!!	CACATTGTTTTTTTGTAGTG+TGG	+	Chr3:85408539-85408558	MsG0380016589.01.T01:intron	30.0%
!!!	GTGTTTTTAGGCATTGATTT+GGG	+	Chr3:85408640-85408659	MsG0380016589.01.T01:intron	30.0%
!!!	GTTTTTTGGTGAAAGATGAT+TGG	-	Chr3:85408231-85408250	None:intergenic	30.0%
!!!	GTTTTTTGTGTTGTTTTTGC+TGG	+	Chr3:85408832-85408851	MsG0380016589.01.T01:intron	30.0%
!!!	TTATACTTGTTTTTTGGTGG+CGG	+	Chr3:85410842-85410861	MsG0380016589.01.T01:intron	30.0%
	AAAACCAAAACTTGGGCAAT+CGG	+	Chr3:85409193-85409212	MsG0380016589.01.T01:five_prime_UTR	35.0%
	AAAAGTAACGTAGCTCCATA+TGG	+	Chr3:85410987-85411006	MsG0380016589.01.T01:intron	35.0%
	AACAACAAACCAGTCATTAC+AGG	+	Chr3:85410511-85410530	MsG0380016589.01.T01:CDS	35.0%
	ACAAAGAACTAGCATCTTTC+AGG	+	Chr3:85410104-85410123	MsG0380016589.01.T01:five_prime_UTR	35.0%
	ACCCAAAACCAAATCAACTA+CGG	-	Chr3:85408622-85408641	None:intergenic	35.0%
	ACCCATTTACAATACTGTTG+TGG	+	Chr3:85412259-85412278	MsG0380016589.01.T01:intron	35.0%
	AGATCTAAACTTCGCATTGA+TGG	-	Chr3:85411405-85411424	None:intergenic	35.0%
	ATAACTTACCGTTGTGTCAT+TGG	+	Chr3:85409067-85409086	MsG0380016589.01.T01:intron	35.0%
	ATACCATAACTTCCAAGCAT+TGG	-	Chr3:85411942-85411961	None:intergenic	35.0%
	ATCAGACTGCATTGTTCAAA+TGG	-	Chr3:85408913-85408932	None:intergenic	35.0%
	ATCCTTATGCTGTTAGTCAA+AGG	+	Chr3:85409402-85409421	MsG0380016589.01.T01:five_prime_UTR	35.0%
	ATCGAACAAAATCAACATCC+AGG	-	Chr3:85409339-85409358	None:intergenic	35.0%
	ATTCCTTATTAATAGGGCTG+AGG	-	Chr3:85412019-85412038	None:intergenic	35.0%
	CAACAACATTCTTAACCAGT+AGG	-	Chr3:85409827-85409846	None:intergenic	35.0%
	CATAAAACAACAACAGTCGA+CGG	-	Chr3:85408372-85408391	None:intergenic	35.0%
	CCATAAGCTCAAACTTTACA+AGG	-	Chr3:85408999-85409018	None:intergenic	35.0%
	CCTTGTAAAGTTTGAGCTTA+TGG	+	Chr3:85408996-85409015	MsG0380016589.01.T01:intron	35.0%
	CCTTGTTGATGCATAACAAA+TGG	-	Chr3:85412385-85412404	None:intergenic	35.0%
	CGCGTTGCAAATAAAATTTC+TGG	-	Chr3:85411201-85411220	None:intergenic	35.0%
	CGGAACAATATAATCAGCTA+TGG	+	Chr3:85410552-85410571	MsG0380016589.01.T01:CDS	35.0%
	CTATATATGAGGTAAGGTGA+TGG	+	Chr3:85409225-85409244	MsG0380016589.01.T01:intron	35.0%
	GAAAATGGAAGAGAAAGACA+GGG	+	Chr3:85409925-85409944	MsG0380016589.01.T01:five_prime_UTR	35.0%
	GAGTTAAGAGTTAAAGGTTC+AGG	-	Chr3:85411878-85411897	None:intergenic	35.0%
	GCTGATGTTTCTTTCAGAAT+AGG	+	Chr3:85410397-85410416	MsG0380016589.01.T01:intron	35.0%
	GGAGTTAGAAAACCAAAACT+TGG	+	Chr3:85409185-85409204	MsG0380016589.01.T01:intron	35.0%
	GGCAAAATCAACAGTATCTA+GGG	+	Chr3:85412490-85412509	MsG0380016589.01.T01:CDS	35.0%
	GTATAACCCACCTAATAACA+AGG	-	Chr3:85412099-85412118	None:intergenic	35.0%
	TAAAGAGGAACAGATTAGAG+AGG	+	Chr3:85410442-85410461	MsG0380016589.01.T01:CDS	35.0%
	TACCATAACTTCCAAGCATT+GGG	-	Chr3:85411941-85411960	None:intergenic	35.0%
	TCGAACAAAATCAACATCCA+GGG	-	Chr3:85409338-85409357	None:intergenic	35.0%
	TGGCAAAATCAACAGTATCT+AGG	+	Chr3:85412489-85412508	MsG0380016589.01.T01:CDS	35.0%
	TGTTGCATAGTTGACATTGT+GGG	-	Chr3:85412468-85412487	None:intergenic	35.0%
	TTCAATTCACAGCTGTGATT+TGG	+	Chr3:85410701-85410720	MsG0380016589.01.T01:intron	35.0%
	TTGTATCCTTTACAACACCT+AGG	+	Chr3:85409671-85409690	MsG0380016589.01.T01:intron	35.0%
	TTTCAGACTGATCATACTCA+TGG	+	Chr3:85412286-85412305	MsG0380016589.01.T01:intron	35.0%
!	ATTCTGAAAGAAACATCAGC+TGG	-	Chr3:85410397-85410416	None:intergenic	35.0%
!	GAAGCTGCTGTTAAGTTTTA+AGG	+	Chr3:85409253-85409272	MsG0380016589.01.T01:intron	35.0%
!	TAATCTCCTAGGTGTTGTAA+AGG	-	Chr3:85409680-85409699	None:intergenic	35.0%
!	TAGACAACTTATTGAGTTGC+AGG	+	Chr3:85410298-85410317	MsG0380016589.01.T01:five_prime_UTR	35.0%
!	TTTCCATTTTCCTGTCCATA+TGG	-	Chr3:85411005-85411024	None:intergenic	35.0%
!	TTTTGTTCGATGACAATGGA+TGG	+	Chr3:85409348-85409367	MsG0380016589.01.T01:five_prime_UTR	35.0%
!!	AATTGTCCCTTGTTATTAGG+TGG	+	Chr3:85412089-85412108	MsG0380016589.01.T01:intron	35.0%
!!	ATGACTGGTTTGTTGTTGAT+TGG	-	Chr3:85410508-85410527	None:intergenic	35.0%
!!	ATTGTCCCTTGTTATTAGGT+GGG	+	Chr3:85412090-85412109	MsG0380016589.01.T01:intron	35.0%
!!	CCATTTGTTATGCATCAACA+AGG	+	Chr3:85412382-85412401	MsG0380016589.01.T01:CDS	35.0%
!!	CGGTTTTGTACTAAAAGAAC+TGG	-	Chr3:85411969-85411988	None:intergenic	35.0%
!!	CTATTTATTTTCCCCTTCTG+GGG	+	Chr3:85408344-85408363	MsG0380016589.01.T01:five_prime_UTR	35.0%
!!	TAGGCATTGATTTGGGATTA+GGG	+	Chr3:85408647-85408666	MsG0380016589.01.T01:intron	35.0%
!!	TTAGGCATTGATTTGGGATT+AGG	+	Chr3:85408646-85408665	MsG0380016589.01.T01:intron	35.0%
!!!	AACCGTAGTTGATTTGGTTT+TGG	+	Chr3:85408617-85408636	MsG0380016589.01.T01:intron	35.0%
!!!	ACCGTAGTTGATTTGGTTTT+GGG	+	Chr3:85408618-85408637	MsG0380016589.01.T01:intron	35.0%
!!!	CTCTAAAGCTCCTCATTTTA+AGG	-	Chr3:85411363-85411382	None:intergenic	35.0%
!!!	GGTGTTTTTAGGCATTGATT+TGG	+	Chr3:85408639-85408658	MsG0380016589.01.T01:intron	35.0%
	AAACATCCATCTCACGAACA+CGG	-	Chr3:85410484-85410503	None:intergenic	40.0%
	AAATCAGTACCTCATCGTCA+GGG	-	Chr3:85408504-85408523	None:intergenic	40.0%
	AAATGTCCAACATGAGACTG+AGG	-	Chr3:85412435-85412454	None:intergenic	40.0%
	AAGGCGTGAAATACTTCAGA+TGG	+	Chr3:85409421-85409440	MsG0380016589.01.T01:five_prime_UTR	40.0%
	AATGCTTCAGGTGGAAATAC+TGG	+	Chr3:85411047-85411066	MsG0380016589.01.T01:CDS	40.0%
	AATGTCCAACATGAGACTGA+GGG	-	Chr3:85412434-85412453	None:intergenic	40.0%
	ATGGATGAATGTACAGAGAC+AGG	+	Chr3:85410571-85410590	MsG0380016589.01.T01:CDS	40.0%
	CAACATTCTTAACCAGTAGG+AGG	-	Chr3:85409824-85409843	None:intergenic	40.0%
	CAATGTCAACTATGCAACAG+TGG	+	Chr3:85412469-85412488	MsG0380016589.01.T01:CDS	40.0%
	CGAACAAAATCAACATCCAG+GGG	-	Chr3:85409337-85409356	None:intergenic	40.0%
	CTGTTGCATAGTTGACATTG+TGG	-	Chr3:85412469-85412488	None:intergenic	40.0%
	CTTCTCATGAACCAATGCAA+GGG	+	Chr3:85411329-85411348	MsG0380016589.01.T01:intron	40.0%
	GAAAATGCGAAACACCTATG+AGG	+	Chr3:85409487-85409506	MsG0380016589.01.T01:five_prime_UTR	40.0%
	GAATATACACCTGAACTTGC+TGG	-	Chr3:85409540-85409559	None:intergenic	40.0%
	GACATGTGATGCAACAGAAT+TGG	-	Chr3:85412412-85412431	None:intergenic	40.0%
	GGAAAATGGAAGAGAAAGAC+AGG	+	Chr3:85409924-85409943	MsG0380016589.01.T01:five_prime_UTR	40.0%
	GGAATCTGCTCCTTAAAATG+AGG	+	Chr3:85411350-85411369	MsG0380016589.01.T01:intron	40.0%
	GGACGAGAGAACTATATATG+AGG	+	Chr3:85409214-85409233	MsG0380016589.01.T01:five_prime_UTR	40.0%
	GGAGTTAACCGTAGTTGATT+TGG	+	Chr3:85408611-85408630	MsG0380016589.01.T01:intron	40.0%
	GGATTGCCAGAAGTTGAAAA+TGG	-	Chr3:85411107-85411126	None:intergenic	40.0%
	TATTCACTTCAAGAGGAGAG+AGG	-	Chr3:85411505-85411524	None:intergenic	40.0%
	TCATGAGCTGGAAAGGAAAA+TGG	+	Chr3:85409910-85409929	MsG0380016589.01.T01:five_prime_UTR	40.0%
	TCTTCTCATGAACCAATGCA+AGG	+	Chr3:85411328-85411347	MsG0380016589.01.T01:intron	40.0%
	TGAGCAAATCGTTTGCAGAA+GGG	+	Chr3:85410196-85410215	MsG0380016589.01.T01:intron	40.0%
	TGGTTGAGCTAAGGGATTAA+AGG	-	Chr3:85411900-85411919	None:intergenic	40.0%
	TTGAGCAAATCGTTTGCAGA+AGG	+	Chr3:85410195-85410214	MsG0380016589.01.T01:intron	40.0%
	TTGCCAGAAGTTGAAAATGG+AGG	-	Chr3:85411104-85411123	None:intergenic	40.0%
!	AAAATTGGTTTCCTCAGGTC+AGG	+	Chr3:85409615-85409634	MsG0380016589.01.T01:intron	40.0%
!	AAAGGTTCAGGTTCGAATCT+TGG	-	Chr3:85411866-85411885	None:intergenic	40.0%
!	ACCATAACTTCCAAGCATTG+GGG	-	Chr3:85411940-85411959	None:intergenic	40.0%
!	ACTTATTGAGTTGCAGGAAC+AGG	+	Chr3:85410304-85410323	MsG0380016589.01.T01:five_prime_UTR	40.0%
!	ATTAGCTTAGTTTGAGGTGC+AGG	+	Chr3:85409164-85409183	MsG0380016589.01.T01:intron	40.0%
!	CATTTTCAACAGCTCAGATC+TGG	-	Chr3:85409474-85409493	None:intergenic	40.0%
!	CATTTTGAACCTCCTTGTCT+GGG	-	Chr3:85411609-85411628	None:intergenic	40.0%
!	GAAAATTTTGTGCCCAGACA+AGG	+	Chr3:85411594-85411613	MsG0380016589.01.T01:intron	40.0%
!	GACATGTTTTGTCAGGAGAT+TGG	+	Chr3:85412221-85412240	MsG0380016589.01.T01:intron	40.0%
!	TCATTTTGAACCTCCTTGTC+TGG	-	Chr3:85411610-85411629	None:intergenic	40.0%
!	TGGTGAAAGATGATTGGTTG+TGG	-	Chr3:85408225-85408244	None:intergenic	40.0%
!	TTCTTTTAACACCTGACCTG+AGG	-	Chr3:85409629-85409648	None:intergenic	40.0%
!!	GTGCATTACTTTCAAGTTGC+TGG	+	Chr3:85408887-85408906	MsG0380016589.01.T01:intron	40.0%
!!!	AGTTCTTTGTTTTGCTCACG+AGG	-	Chr3:85410094-85410113	None:intergenic	40.0%
!!!	CGACTGTTGTTGTTTTATGG+AGG	+	Chr3:85408373-85408392	MsG0380016589.01.T01:five_prime_UTR	40.0%
!!!	CGTCGACTGTTGTTGTTTTA+TGG	+	Chr3:85408370-85408389	MsG0380016589.01.T01:five_prime_UTR	40.0%
!!!	TTGTTGTTTTATGGAGGCCA+CGG	+	Chr3:85408379-85408398	MsG0380016589.01.T01:five_prime_UTR	40.0%
	AACATCCATCTCACGAACAC+GGG	-	Chr3:85410483-85410502	None:intergenic	45.0%
	AATGCAGTAACTTGACCAGG+TGG	-	Chr3:85412358-85412377	None:intergenic	45.0%
	AGATTAGAGAGGCTCAAGCA+TGG	+	Chr3:85410453-85410472	MsG0380016589.01.T01:CDS	45.0%
	ATAGTTGACATTGTGGGCAC+TGG	-	Chr3:85412462-85412481	None:intergenic	45.0%
	CAAATCAGTACCTCATCGTC+AGG	-	Chr3:85408505-85408524	None:intergenic	45.0%
	CACAAAGTTGCTCCTGCAAA+AGG	-	Chr3:85409874-85409893	None:intergenic	45.0%
	CAGCCTCAGCCCTATTAATA+AGG	+	Chr3:85412013-85412032	MsG0380016589.01.T01:intron	45.0%
	CGCCTTTGACTAACAGCATA+AGG	-	Chr3:85409407-85409426	None:intergenic	45.0%
	CTAACAATGCCAGCAAGTTC+AGG	+	Chr3:85409528-85409547	MsG0380016589.01.T01:five_prime_UTR	45.0%
	GCAATTCAGCCTGTAATGAC+TGG	-	Chr3:85410523-85410542	None:intergenic	45.0%
	GCAGGAGCAACTTTGTGAAA+GGG	+	Chr3:85409877-85409896	MsG0380016589.01.T01:intron	45.0%
	GCTCCATATGGACAGGAAAA+TGG	+	Chr3:85410999-85411018	MsG0380016589.01.T01:intron	45.0%
	GTGCAATTCATGAGCTGGAA+AGG	+	Chr3:85409903-85409922	MsG0380016589.01.T01:five_prime_UTR	45.0%
	TAACGTAGCTCCATATGGAC+AGG	+	Chr3:85410992-85411011	MsG0380016589.01.T01:intron	45.0%
	TATTAATAGGGCTGAGGCTG+TGG	-	Chr3:85412013-85412032	None:intergenic	45.0%
	TCAGGTTCGAATCTTGGCAA+GGG	-	Chr3:85411860-85411879	None:intergenic	45.0%
	TGAGACTGAGTAGCTATGCA+TGG	+	Chr3:85411532-85411551	MsG0380016589.01.T01:intron	45.0%
	TGCAATGCAGTAACTTGACC+AGG	-	Chr3:85412361-85412380	None:intergenic	45.0%
	TGCAGGAGCAACTTTGTGAA+AGG	+	Chr3:85409876-85409895	MsG0380016589.01.T01:intron	45.0%
	TGCTCACTTGGTTGAGCTAA+GGG	-	Chr3:85411908-85411927	None:intergenic	45.0%
	TTCTGGCAATCCGTCAATTC+AGG	+	Chr3:85411115-85411134	MsG0380016589.01.T01:CDS	45.0%
	TTCTTAACCAGTAGGAGGCT+AGG	-	Chr3:85409819-85409838	None:intergenic	45.0%
	TTGAATGGAGGCAATGCTTC+AGG	+	Chr3:85411035-85411054	MsG0380016589.01.T01:CDS	45.0%
	TTGCTCACTTGGTTGAGCTA+AGG	-	Chr3:85411909-85411928	None:intergenic	45.0%
!	AAGCACTGCACCTGAATTGA+CGG	-	Chr3:85411128-85411147	None:intergenic	45.0%
!	AATTTTGTGCCCAGACAAGG+AGG	+	Chr3:85411597-85411616	MsG0380016589.01.T01:intron	45.0%
!	GGTCCTCCATTTTCAACTTC+TGG	+	Chr3:85411098-85411117	MsG0380016589.01.T01:CDS	45.0%
!	TTCAGGTTCGAATCTTGGCA+AGG	-	Chr3:85411861-85411880	None:intergenic	45.0%
!!	ATAACTTCCAAGCATTGGGG+GGG	-	Chr3:85411937-85411956	None:intergenic	45.0%
!!	CATAACTTCCAAGCATTGGG+GGG	-	Chr3:85411938-85411957	None:intergenic	45.0%
!!	CCATAACTTCCAAGCATTGG+GGG	-	Chr3:85411939-85411958	None:intergenic	45.0%
!!	CTGTTTATCTGGCCTTTTGC+AGG	+	Chr3:85409859-85409878	MsG0380016589.01.T01:intron	45.0%
!!	TCTTTAGCTCTGCCTTGTGT+CGG	+	Chr3:85411565-85411584	MsG0380016589.01.T01:intron	45.0%
!!!	CTGTTTTTCAAGGTGCAGCA+AGG	+	Chr3:85409304-85409323	MsG0380016589.01.T01:intron	45.0%
!!!	TCTTTGTTTTGCTCACGAGG+AGG	-	Chr3:85410091-85410110	None:intergenic	45.0%
	AATGGAGGCAATGCTTCAGG+TGG	+	Chr3:85411038-85411057	MsG0380016589.01.T01:CDS	50.0%
	ACTTGACCAGGTGGAAGGTA+CGG	-	Chr3:85412349-85412368	None:intergenic	50.0%
	AGCTAGCTGATGCAAGAGAG+AGG	+	Chr3:85410920-85410939	MsG0380016589.01.T01:intron	50.0%
	AGGAGCAGATTCCCTTGCAT+TGG	-	Chr3:85411343-85411362	None:intergenic	50.0%
	ATTTGCTCCTAGCCTCCTAC+TGG	+	Chr3:85409809-85409828	MsG0380016589.01.T01:intron	50.0%
	CACCTATGAGGCTCAACTGA+AGG	+	Chr3:85409499-85409518	MsG0380016589.01.T01:five_prime_UTR	50.0%
	CAGTAACTTGACCAGGTGGA+AGG	-	Chr3:85412354-85412373	None:intergenic	50.0%
	CATGTCCCTCAGTCTCATGT+TGG	+	Chr3:85412426-85412445	MsG0380016589.01.T01:CDS	50.0%
	CCCCCAATGCTTGGAAGTTA+TGG	+	Chr3:85411936-85411955	MsG0380016589.01.T01:intron	50.0%
	CTCAATGAAGCAAGCAGCGA+AGG	-	Chr3:85410180-85410199	None:intergenic	50.0%
	CTCCTTCAGTTGAGCCTCAT+AGG	-	Chr3:85409504-85409523	None:intergenic	50.0%
	GAGTAGCTATGCATGGCTGT+TGG	+	Chr3:85411539-85411558	MsG0380016589.01.T01:intron	50.0%
	GATAACCCGTGTTCGTGAGA+TGG	+	Chr3:85410475-85410494	MsG0380016589.01.T01:CDS	50.0%
	GGAGCGTGATCATTCAGAAG+CGG	+	Chr3:85410217-85410236	MsG0380016589.01.T01:five_prime_UTR	50.0%
	TCTTTCAGAATAGGGTGCGC+AGG	+	Chr3:85410406-85410425	MsG0380016589.01.T01:intron	50.0%
	TGGGGGACAATCAGAGATGA+TGG	-	Chr3:85412325-85412344	None:intergenic	50.0%
	TGGTTGTGGCGAATTTCGAC+CGG	-	Chr3:85408211-85408230	None:intergenic	50.0%
!	GTAGTGTGGTTTGCGTGTGA+TGG	+	Chr3:85408553-85408572	MsG0380016589.01.T01:intron	50.0%
!	TCGTCCGATTGCCCAAGTTT+TGG	-	Chr3:85409200-85409219	None:intergenic	50.0%
	ACAGCACGCCATTCTTTCCG+TGG	-	Chr3:85408454-85408473	None:intergenic	55.0%
	AGACTCCGCCACGGAAAGAA+TGG	+	Chr3:85408443-85408462	MsG0380016589.01.T01:five_prime_UTR	55.0%
	GCTGATGCAAGAGAGAGGAC+TGG	+	Chr3:85410925-85410944	MsG0380016589.01.T01:intron	55.0%
	GGAGCGTGCAATTCATGAGC+TGG	+	Chr3:85409898-85409917	MsG0380016589.01.T01:five_prime_UTR	55.0%
	TGCGAGAAACCCTGACGATG+AGG	+	Chr3:85408492-85408511	MsG0380016589.01.T01:five_prime_UTR	55.0%
!	CTTGACCAGGTGGAAGGTAC+GGG	-	Chr3:85412348-85412367	None:intergenic	55.0%
!	GTGGCGGTAGTTTGCAGAGA+TGG	+	Chr3:85410858-85410877	MsG0380016589.01.T01:intron	55.0%
!!	TTCCAAGCATTGGGGGGGAT+GGG	-	Chr3:85411932-85411951	None:intergenic	55.0%
	AACCCATCCCCCCCAATGCT+TGG	+	Chr3:85411927-85411946	MsG0380016589.01.T01:intron	60.0%
	CTCAGTTGCAGACTCCGCCA+CGG	+	Chr3:85408434-85408453	MsG0380016589.01.T01:five_prime_UTR	60.0%
	GCACGCCATTCTTTCCGTGG+CGG	-	Chr3:85408451-85408470	None:intergenic	60.0%
!	ACCAGGTGGAAGGTACGGGT+GGG	-	Chr3:85412344-85412363	None:intergenic	60.0%
!	GGCTGAATTGCGAGAGCGCA+CGG	+	Chr3:85410532-85410551	MsG0380016589.01.T01:CDS	60.0%
!!	CTTCCAAGCATTGGGGGGGA+TGG	-	Chr3:85411933-85411952	None:intergenic	60.0%
	ACAGTCGACGGTGCCCCAGA+AGG	-	Chr3:85408360-85408379	None:intergenic	65.0%
	ACTGAGAGCAACGCCGCGAG+CGG	-	Chr3:85408420-85408439	None:intergenic	65.0%
	AGTCGACGGTGCCCCAGAAG+GGG	-	Chr3:85408358-85408377	None:intergenic	65.0%
	CAGTCGACGGTGCCCCAGAA+GGG	-	Chr3:85408359-85408378	None:intergenic	65.0%
	GCAGCAAGGAAGAGAGCCCC+TGG	+	Chr3:85409318-85409337	MsG0380016589.01.T01:intron	65.0%
!	CAGGTGGAAGGTACGGGTGG+GGG	-	Chr3:85412342-85412361	None:intergenic	65.0%
!	CCAGGTGGAAGGTACGGGTG+GGG	-	Chr3:85412343-85412362	None:intergenic	65.0%
!	GACCAGGTGGAAGGTACGGG+TGG	-	Chr3:85412345-85412364	None:intergenic	65.0%
!!	GGGGGGATGGGTTGCTCACT+TGG	-	Chr3:85411920-85411939	None:intergenic	65.0%
	CCCCACCCGTACCTTCCACC+TGG	+	Chr3:85412340-85412359	MsG0380016589.01.T01:CDS	70.0%
	GAGAGCAACGCCGCGAGCGG+CGG	-	Chr3:85408417-85408436	None:intergenic	75.0%
!	GCCGCAGCTGCCGCCGCTCG+CGG	+	Chr3:85408404-85408423	MsG0380016589.01.T01:five_prime_UTR	85.0%
!	GCCGCGAGCGGCGGCAGCTG+CGG	-	Chr3:85408408-85408427	None:intergenic	85.0%
!	GCGAGCGGCGGCAGCTGCGG+CGG	-	Chr3:85408405-85408424	None:intergenic	85.0%
!	GGCGGCAGCTGCGGCGGCCG+TGG	-	Chr3:85408399-85408418	None:intergenic	90.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	85408205	85412510	85408205	ID=MsG0380016589.01;Name=MsG0380016589.01
Chr3	mRNA	85408205	85412510	85408205	ID=MsG0380016589.01.T01;Parent=MsG0380016589.01;Name=MsG0380016589.01.T01;_AED=0.49;_eAED=0.49;_QI=875\|0.87\|0.77\|1\|0.25\|0.22\|9\|0\|165
Chr3	exon	85408205	85408513	85408205	ID=MsG0380016589.01.T01:exon:11307;Parent=MsG0380016589.01.T01
Chr3	exon	85409186	85409235	85409186	ID=MsG0380016589.01.T01:exon:11308;Parent=MsG0380016589.01.T01
Chr3	exon	85409322	85409549	85409322	ID=MsG0380016589.01.T01:exon:11309;Parent=MsG0380016589.01.T01
Chr3	exon	85409881	85409979	85409881	ID=MsG0380016589.01.T01:exon:11310;Parent=MsG0380016589.01.T01
Chr3	exon	85410072	85410125	85410072	ID=MsG0380016589.01.T01:exon:11311;Parent=MsG0380016589.01.T01
Chr3	exon	85410214	85410325	85410214	ID=MsG0380016589.01.T01:exon:11312;Parent=MsG0380016589.01.T01
Chr3	exon	85410414	85410592	85410414	ID=MsG0380016589.01.T01:exon:11313;Parent=MsG0380016589.01.T01
Chr3	exon	85411014	85411136	85411014	ID=MsG0380016589.01.T01:exon:11314;Parent=MsG0380016589.01.T01
Chr3	exon	85412292	85412510	85412292	ID=MsG0380016589.01.T01:exon:11315;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85408205	85408513	85408205	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85409186	85409235	85409186	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85409322	85409549	85409322	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85409881	85409979	85409881	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85410072	85410125	85410072	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85410214	85410325	85410214	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	five_prime_UTR	85410414	85410436	85410414	ID=MsG0380016589.01.T01:five_prime_utr;Parent=MsG0380016589.01.T01
Chr3	CDS	85410437	85410592	85410437	ID=MsG0380016589.01.T01:cds;Parent=MsG0380016589.01.T01
Chr3	CDS	85411014	85411136	85411014	ID=MsG0380016589.01.T01:cds;Parent=MsG0380016589.01.T01
Chr3	CDS	85412292	85412510	85412292	ID=MsG0380016589.01.T01:cds;Parent=MsG0380016589.01.T01

Gene Sequence

>MsG0380016589.01.T01

ATGTTTAAAGAGGAACAGATTAGAGAGGCTCAAGCATGGATAACCCGTGTTCGTGAGATGGATGTTTTCCAATCAACAACAAACCAGTCATTACAGGCTGAATTGCGAGAGCGCACGGAACAATATAATCAGCTATGGATGAATGTACAGAGACAGGAAAATGGAAATCAATTTGACTTGAATGGAGGCAATGCTTCAGGTGGAAATACTGGTCTCCTTACAAATGAGAACTCAGATAATGGTCCTCCATTTTCAACTTCTGGCAATCCGTCAATTCAGACTGATCATACTCATGGTGTCGCTATTGCTCCATCATCTCTGATTGTCCCCCACCCGTACCTTCCACCTGGTCAAGTTACTGCATTGCATCCATTTGTTATGCATCAACAAGGAGTGCCAATTCTGTTGCATCACATGTCCCTCAGTCTCATGTTGGACATTTTCATCCAGTGCCCACAATGTCAACTATGCAACAGTGGCAAAATCAACAGTATCTAG

Protein sequence

>MsG0380016589.01.T01

MFKEEQIREAQAWITRVREMDVFQSTTNQSLQAELRERTEQYNQLWMNVQRQENGNQFDLNGGNASGGNTGLLTNENSDNGPPFSTSGNPSIQTDHTHGVAIAPSSLIVPHPYLPPGQVTALHPFVMHQQGVPILLHHMSLSLMLDIFIQCPQCQLCNSGKINSI*