Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007726.01.T01 | XP_024632261.2 | 88.124 | 421 | 41 | 3 | 1 | 421 | 1 | 412 | 0 | 680 |
| MsG0280007726.01.T01 | XP_024632261.2 | 65.894 | 302 | 43 | 5 | 316 | 560 | 381 | 679 | 4.78E-102 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007726.01.T01 | Q9LUS2 | 66.412 | 131 | 44 | 0 | 430 | 560 | 301 | 431 | 2.41E-45 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007726.01.T01 | A0A396J4N6 | 88.124 | 421 | 41 | 3 | 1 | 421 | 1 | 412 | 0.0 | 680 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047793.01 | MsG0280007726.01 | 0.825115 | 5.588931e-54 | 5.047726e-51 |
| MsG0080048374.01 | MsG0280007726.01 | 0.837929 | 3.888107e-57 | 5.127491e-54 |
| MsG0080048602.01 | MsG0280007726.01 | 0.858855 | 6.184017e-63 | 1.600890e-59 |
| MsG0080048765.01 | MsG0280007726.01 | 0.806046 | 9.947574e-50 | 5.345618e-47 |
| MsG0180000101.01 | MsG0280007726.01 | 0.805370 | 1.379536e-49 | 7.285638e-47 |
| MsG0180000144.01 | MsG0280007726.01 | 0.804196 | 2.425660e-49 | 1.242906e-46 |
| MsG0180000146.01 | MsG0280007726.01 | 0.877799 | 4.703607e-69 | 2.396781e-65 |
| MsG0180000555.01 | MsG0280007726.01 | 0.822182 | 2.715698e-53 | 2.256363e-50 |
| MsG0180000741.01 | MsG0280007726.01 | 0.846211 | 2.503723e-59 | 4.277407e-56 |
| MsG0180000856.01 | MsG0280007726.01 | 0.818192 | 2.227971e-52 | 1.656437e-49 |
| MsG0180001315.01 | MsG0280007726.01 | 0.855850 | 4.782441e-62 | 1.119386e-58 |
| MsG0180001570.01 | MsG0280007726.01 | 0.802249 | 6.136433e-49 | 2.991537e-46 |
| MsG0180002071.01 | MsG0280007726.01 | 0.804022 | 2.636641e-49 | 1.345047e-46 |
| MsG0180002300.01 | MsG0280007726.01 | 0.828441 | 8.973270e-55 | 8.920331e-52 |
| MsG0180002709.01 | MsG0280007726.01 | 0.818619 | 1.783111e-52 | 1.341343e-49 |
| MsG0180002975.01 | MsG0280007726.01 | 0.845474 | 3.971029e-59 | 6.625472e-56 |
| MsG0180003181.01 | MsG0280007726.01 | 0.819413 | 1.176884e-52 | 9.050024e-50 |
| MsG0180003303.01 | MsG0280007726.01 | 0.869306 | 3.417563e-66 | 1.276442e-62 |
| MsG0180003744.01 | MsG0280007726.01 | 0.827320 | 1.670074e-54 | 1.606894e-51 |
| MsG0180004056.01 | MsG0280007726.01 | 0.850033 | 2.205856e-60 | 4.264192e-57 |
| MsG0180004139.01 | MsG0280007726.01 | 0.804361 | 2.241473e-49 | 1.153428e-46 |
| MsG0180004252.01 | MsG0280007726.01 | 0.830774 | 2.429558e-55 | 2.585186e-52 |
| MsG0180004383.01 | MsG0280007726.01 | 0.852155 | 5.557508e-61 | 1.150878e-57 |
| MsG0180004437.01 | MsG0280007726.01 | 0.854763 | 9.909563e-62 | 2.236971e-58 |
| MsG0180004598.01 | MsG0280007726.01 | 0.833569 | 4.946144e-56 | 5.718268e-53 |
| MsG0180004645.01 | MsG0280007726.01 | 0.842752 | 2.134554e-58 | 3.267977e-55 |
| MsG0180004872.01 | MsG0280007726.01 | 0.809851 | 1.542391e-50 | 9.155463e-48 |
| MsG0180005228.01 | MsG0280007726.01 | 0.845494 | 3.922713e-59 | 6.548635e-56 |
| MsG0180005246.01 | MsG0280007726.01 | 0.813882 | 2.043308e-51 | 1.350544e-48 |
| MsG0180005985.01 | MsG0280007726.01 | 0.864442 | 1.212090e-64 | 3.806712e-61 |
| MsG0180006050.01 | MsG0280007726.01 | 0.839302 | 1.718622e-57 | 2.363454e-54 |
| MsG0180006098.01 | MsG0280007726.01 | 0.826376 | 2.806157e-54 | 2.627219e-51 |
| MsG0180006225.01 | MsG0280007726.01 | 0.827759 | 1.310096e-54 | 1.276569e-51 |
| MsG0280006304.01 | MsG0280007726.01 | 0.823818 | 1.128379e-53 | 9.821457e-51 |
| MsG0280006367.01 | MsG0280007726.01 | 0.841963 | 3.454662e-58 | 5.160012e-55 |
| MsG0280006368.01 | MsG0280007726.01 | 0.824576 | 7.491777e-54 | 6.662763e-51 |
| MsG0280007011.01 | MsG0280007726.01 | 0.842468 | 2.538294e-58 | 3.852573e-55 |
| MsG0280007048.01 | MsG0280007726.01 | 0.804104 | 2.535270e-49 | 1.296026e-46 |
| MsG0280007087.01 | MsG0280007726.01 | 0.838758 | 2.377389e-57 | 3.215496e-54 |
| MsG0280007496.01 | MsG0280007726.01 | 0.826161 | 3.157734e-54 | 2.938096e-51 |
| MsG0280007726.01 | MsG0280007819.01 | 0.823077 | 1.682251e-53 | 1.433872e-50 |
| MsG0280007726.01 | MsG0280007829.01 | 0.835735 | 1.411106e-56 | 1.741057e-53 |
| MsG0280007726.01 | MsG0280007830.01 | 0.852295 | 5.071212e-61 | 1.054877e-57 |
| MsG0280007726.01 | MsG0280008363.01 | 0.814711 | 1.340378e-51 | 9.060256e-49 |
| MsG0280007726.01 | MsG0280008849.01 | 0.809275 | 2.050412e-50 | 1.198652e-47 |
| MsG0280007726.01 | MsG0280010109.01 | 0.803157 | 3.985856e-49 | 1.988596e-46 |
| MsG0280007726.01 | MsG0280010153.01 | 0.857675 | 1.388625e-62 | 3.454792e-59 |
| MsG0280007726.01 | MsG0280010735.01 | 0.802389 | 5.742879e-49 | 2.809762e-46 |
| MsG0280007726.01 | MsG0280010816.01 | 0.816903 | 4.350749e-52 | 3.122324e-49 |
| MsG0280007726.01 | MsG0280010866.01 | 0.829705 | 4.432694e-55 | 4.572663e-52 |
| MsG0280007726.01 | MsG0280010901.01 | 0.821162 | 4.674617e-53 | 3.774048e-50 |
| MsG0280007726.01 | MsG0280010932.01 | 0.866125 | 3.583855e-65 | 1.194684e-61 |
| MsG0280007726.01 | MsG0280010976.01 | 0.832827 | 7.568282e-56 | 8.557710e-53 |
| MsG0280007726.01 | MsG0280011056.01 | 0.834443 | 2.988007e-56 | 3.546589e-53 |
| MsG0280007726.01 | MsG0280011075.01 | 0.895716 | 7.356909e-76 | 7.720400e-72 |
| MsG0280007726.01 | MsG0280011085.01 | 0.827418 | 1.581927e-54 | 1.526422e-51 |
| MsG0280007726.01 | MsG0380011722.01 | 0.800443 | 1.438110e-48 | 6.697014e-46 |
| MsG0280007726.01 | MsG0380012458.01 | 0.806804 | 6.884058e-50 | 3.771768e-47 |
| MsG0280007726.01 | MsG0380014138.01 | 0.853131 | 2.926559e-61 | 6.257940e-58 |
| MsG0280007726.01 | MsG0380014489.01 | 0.811701 | 6.137130e-51 | 3.825209e-48 |
| MsG0280007726.01 | MsG0380015436.01 | 0.863330 | 2.688215e-64 | 8.119723e-61 |
| MsG0280007726.01 | MsG0380015607.01 | 0.823550 | 1.303972e-53 | 1.126276e-50 |
| MsG0280007726.01 | MsG0380015614.01 | 0.802672 | 5.020051e-49 | 2.473725e-46 |
| MsG0280007726.01 | MsG0380016209.01 | 0.824520 | 7.721319e-54 | 6.855488e-51 |
| MsG0280007726.01 | MsG0380016589.01 | 0.869724 | 2.497933e-66 | 9.469226e-63 |
| MsG0280007726.01 | MsG0380017038.01 | 0.801073 | 1.069168e-48 | 5.059413e-46 |
| MsG0280007726.01 | MsG0380017045.01 | 0.807665 | 4.524815e-50 | 2.535052e-47 |
| MsG0280007726.01 | MsG0380017139.01 | 0.800561 | 1.360245e-48 | 6.353404e-46 |
| MsG0280007726.01 | MsG0380017210.01 | 0.812273 | 4.606489e-51 | 2.916025e-48 |
| MsG0280007726.01 | MsG0380017401.01 | 0.820502 | 6.630272e-53 | 5.255345e-50 |
| MsG0280007726.01 | MsG0380017797.01 | 0.800069 | 1.713119e-48 | 7.902488e-46 |
| MsG0280007726.01 | MsG0380017939.01 | 0.814664 | 1.373386e-51 | 9.271382e-49 |
| MsG0280007726.01 | MsG0480018311.01 | 0.820652 | 6.124299e-53 | 4.874335e-50 |
| MsG0280007726.01 | MsG0480018460.01 | 0.815714 | 8.025768e-52 | 5.575504e-49 |
| MsG0280007726.01 | MsG0480018467.01 | 0.826505 | 2.615171e-54 | 2.457139e-51 |
| MsG0280007726.01 | MsG0480019884.01 | 0.806986 | 6.301497e-50 | 3.468801e-47 |
| MsG0280007726.01 | MsG0480021204.01 | 0.850302 | 1.853448e-60 | 3.614593e-57 |
| MsG0280007726.01 | MsG0480021216.01 | 0.882270 | 1.199433e-70 | 7.259422e-67 |
| MsG0280007726.01 | MsG0480022203.01 | 0.804918 | 1.715395e-49 | 8.955514e-47 |
| MsG0280007726.01 | MsG0480022261.01 | 0.834113 | 3.615736e-56 | 4.249185e-53 |
| MsG0280007726.01 | MsG0480022317.01 | 0.825025 | 5.868910e-54 | 5.287366e-51 |
| MsG0280007726.01 | MsG0480022318.01 | 0.804347 | 2.256420e-49 | 1.160699e-46 |
| MsG0280007726.01 | MsG0480022552.01 | 0.868879 | 4.702105e-66 | 1.728632e-62 |
| MsG0280007726.01 | MsG0480022710.01 | 0.815648 | 8.299780e-52 | 5.755720e-49 |
| MsG0280007726.01 | MsG0480022719.01 | 0.819126 | 1.368169e-52 | 1.043742e-49 |
| MsG0280007726.01 | MsG0480022819.01 | 0.803625 | 3.187514e-49 | 1.609521e-46 |
| MsG0280007726.01 | MsG0480023609.01 | 0.825719 | 4.021422e-54 | 3.694977e-51 |
| MsG0280007726.01 | MsG0580024311.01 | 0.825100 | 5.633386e-54 | 5.085775e-51 |
| MsG0280007726.01 | MsG0580024392.01 | 0.855531 | 5.925097e-62 | 1.372169e-58 |
| MsG0280007726.01 | MsG0580024770.01 | 0.844832 | 5.919907e-59 | 9.676828e-56 |
| MsG0280007726.01 | MsG0580024956.01 | 0.803636 | 3.172209e-49 | 1.602211e-46 |
| MsG0280007726.01 | MsG0580024959.01 | 0.843550 | 1.307701e-58 | 2.053267e-55 |
| MsG0280007726.01 | MsG0580025128.01 | 0.883549 | 4.083148e-71 | 2.600778e-67 |
| MsG0280007726.01 | MsG0580025340.01 | 0.819339 | 1.223024e-52 | 9.384703e-50 |
| MsG0280007726.01 | MsG0580025907.01 | 0.805144 | 1.537970e-49 | 8.075655e-47 |
| MsG0280007726.01 | MsG0580025922.01 | 0.822140 | 2.777662e-53 | 2.305201e-50 |
| MsG0280007726.01 | MsG0580026664.01 | 0.810167 | 1.318733e-50 | 7.892702e-48 |
| MsG0280007726.01 | MsG0580029036.01 | 0.860125 | 2.568949e-63 | 6.947834e-60 |
| MsG0280007726.01 | MsG0580029208.01 | 0.846907 | 1.616864e-59 | 2.825213e-56 |
| MsG0280007726.01 | MsG0580029348.01 | 0.819508 | 1.119195e-52 | 8.629640e-50 |
| MsG0280007726.01 | MsG0580029540.01 | 0.835924 | 1.263805e-56 | 1.568100e-53 |
| MsG0280007726.01 | MsG0580029639.01 | 0.816957 | 4.230629e-52 | 3.040880e-49 |
| MsG0280007726.01 | MsG0580029647.01 | 0.821954 | 3.067646e-53 | 2.532296e-50 |
| MsG0280007726.01 | MsG0580029650.01 | 0.838625 | 2.573564e-57 | 3.466903e-54 |
| MsG0280007726.01 | MsG0580030100.01 | 0.823551 | 1.303088e-53 | 1.125554e-50 |
| MsG0280007726.01 | MsG0680030684.01 | 0.813105 | 3.028316e-51 | 1.959632e-48 |
| MsG0280007726.01 | MsG0680031063.01 | 0.840540 | 8.176255e-58 | 1.168334e-54 |
| MsG0280007726.01 | MsG0680034757.01 | 0.809762 | 1.612322e-50 | 9.548654e-48 |
| MsG0280007726.01 | MsG0780035936.01 | 0.823590 | 1.275964e-53 | 1.103394e-50 |
| MsG0280007726.01 | MsG0780036836.01 | 0.809915 | 1.494155e-50 | 8.884119e-48 |
| MsG0280007726.01 | MsG0780037286.01 | 0.839884 | 1.212903e-57 | 1.698164e-54 |
| MsG0280007726.01 | MsG0780037755.01 | 0.801705 | 7.937403e-49 | 3.816184e-46 |
| MsG0280007726.01 | MsG0780039587.01 | 0.838875 | 2.217214e-57 | 3.009584e-54 |
| MsG0280007726.01 | MsG0780040180.01 | 0.823786 | 1.148492e-53 | 9.987585e-51 |
| MsG0280007726.01 | MsG0780040312.01 | 0.817008 | 4.119151e-52 | 2.964818e-49 |
| MsG0280007726.01 | MsG0780040687.01 | 0.832422 | 9.539286e-56 | 1.065715e-52 |
| MsG0280007726.01 | MsG0780040742.01 | 0.850616 | 1.513545e-60 | 2.981952e-57 |
| MsG0280007726.01 | MsG0780041033.01 | 0.808997 | 2.352194e-50 | 1.364817e-47 |
| MsG0280007726.01 | MsG0780041183.01 | 0.846381 | 2.250517e-59 | 3.866639e-56 |
| MsG0280007726.01 | MsG0780041310.01 | 0.804772 | 1.840299e-49 | 9.570933e-47 |
| MsG0280007726.01 | MsG0780041370.01 | 0.817306 | 3.531681e-52 | 2.562567e-49 |
| MsG0280007726.01 | MsG0780041371.01 | 0.843281 | 1.543116e-58 | 2.402564e-55 |
| MsG0280007726.01 | MsG0880042206.01 | 0.846992 | 1.532702e-59 | 2.685401e-56 |
| MsG0280007726.01 | MsG0880042329.01 | 0.813075 | 3.074903e-51 | 1.988206e-48 |
| MsG0280007726.01 | MsG0880042838.01 | 0.859086 | 5.275760e-63 | 1.376420e-59 |
| MsG0280007726.01 | MsG0880042983.01 | 0.812690 | 3.734750e-51 | 2.390473e-48 |
| MsG0280007726.01 | MsG0880043162.01 | 0.828305 | 9.681992e-55 | 9.585625e-52 |
| MsG0280007726.01 | MsG0880043341.01 | 0.828621 | 8.120018e-55 | 8.114140e-52 |
| MsG0280007726.01 | MsG0880043533.01 | 0.816587 | 5.122224e-52 | 3.644226e-49 |
| MsG0280007726.01 | MsG0880044948.01 | 0.818584 | 1.816258e-52 | 1.364977e-49 |
| MsG0280007726.01 | MsG0880044950.01 | 0.837717 | 4.409135e-57 | 5.777318e-54 |
| MsG0280007726.01 | MsG0880045165.01 | 0.859325 | 4.472299e-63 | 1.176559e-59 |
| MsG0280007726.01 | MsG0880045448.01 | 0.818912 | 1.530494e-52 | 1.160810e-49 |
| MsG0280007726.01 | MsG0880045841.01 | 0.854411 | 1.253572e-61 | 2.796910e-58 |
| MsG0280007726.01 | MsG0880046047.01 | 0.801953 | 7.059664e-49 | 3.415577e-46 |
| MsG0280007726.01 | MsG0880046404.01 | 0.806770 | 6.998905e-50 | 3.831243e-47 |
| MsG0280007726.01 | MsG0880046643.01 | 0.809516 | 1.820643e-50 | 1.071161e-47 |
| MsG0280007726.01 | MsG0880047289.01 | 0.805165 | 1.523106e-49 | 8.001580e-47 |
| MsG0280007726.01 | MsG0880047745.01 | 0.819335 | 1.226115e-52 | 9.407050e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007726.01.T01 | MTR_2g030630 | 88.124 | 421 | 41 | 3 | 1 | 421 | 1 | 412 | 0.0 | 679 |
| MsG0280007726.01.T01 | MTR_2g030630 | 65.563 | 302 | 44 | 5 | 316 | 560 | 381 | 679 | 2.36e-105 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007726.01.T01 | AT3G16620 | 66.412 | 131 | 44 | 0 | 430 | 560 | 301 | 431 | 2.46e-46 | 175 |
| MsG0280007726.01.T01 | AT2G16640 | 76.042 | 96 | 23 | 0 | 465 | 560 | 454 | 549 | 2.24e-38 | 151 |
| MsG0280007726.01.T01 | AT2G16640 | 76.042 | 96 | 23 | 0 | 465 | 560 | 454 | 549 | 2.24e-38 | 151 |
| MsG0280007726.01.T01 | AT2G16640 | 76.042 | 96 | 23 | 0 | 465 | 560 | 454 | 549 | 2.24e-38 | 151 |
| MsG0280007726.01.T01 | AT4G02510 | 39.000 | 100 | 52 | 3 | 462 | 559 | 739 | 831 | 3.90e-11 | 66.6 |
| MsG0280007726.01.T01 | AT4G02510 | 39.000 | 100 | 52 | 3 | 462 | 559 | 739 | 831 | 3.90e-11 | 66.6 |
| MsG0280007726.01.T01 | AT4G02510 | 39.000 | 100 | 52 | 3 | 462 | 559 | 739 | 831 | 3.90e-11 | 66.6 |
| MsG0280007726.01.T01 | AT4G02510 | 39.000 | 100 | 52 | 3 | 462 | 559 | 739 | 831 | 3.90e-11 | 66.6 |
Find 145 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGGAAGCACGGTGTTTC+AGG | 0.207753 | 2:+19696377 | MsG0280007726.01.T01:CDS |
| GATGAGTTGCATACAGAATT+TGG | 0.215641 | 2:+19696540 | MsG0280007726.01.T01:CDS |
| TCAGATTCGGTTGATGAAAT+TGG | 0.235296 | 2:+19696105 | MsG0280007726.01.T01:CDS |
| GTATCCTTGTGGATTATATC+AGG | 0.262750 | 2:-19696792 | None:intergenic |
| TGGAACTGCTGCTCCATTAC+TGG | 0.276869 | 2:+19697489 | MsG0280007726.01.T01:CDS |
| ACAAAATGGTGGTATGGTTT+TGG | 0.280172 | 2:+19696482 | MsG0280007726.01.T01:CDS |
| ATCTAATGAGTCGAAGAATT+TGG | 0.280838 | 2:+19695942 | MsG0280007726.01.T01:CDS |
| TTGCGGCTGGCTAATAGGTT+TGG | 0.294610 | 2:+19697658 | MsG0280007726.01.T01:CDS |
| TAATACACAGTCCCAGAAAA+TGG | 0.306853 | 2:+19697561 | MsG0280007726.01.T01:CDS |
| CTTGTTCGTCCTGTTGGCCT+TGG | 0.328627 | 2:+19697469 | MsG0280007726.01.T01:CDS |
| AGATGAAGTGATTGATAATC+AGG | 0.330393 | 2:+19696209 | MsG0280007726.01.T01:CDS |
| GAGAGAAACTTCAAATGATT+AGG | 0.338120 | 2:+19697626 | MsG0280007726.01.T01:CDS |
| GCACAAGTTCTTTATAGATT+AGG | 0.340685 | 2:+19697706 | MsG0280007726.01.T01:CDS |
| TAGTTCATTGCCTTCGGATT+TGG | 0.347792 | 2:+19696050 | MsG0280007726.01.T01:CDS |
| TAGCAAAAGAACTTTCTGAT+AGG | 0.348073 | 2:-19696998 | None:intergenic |
| GGTGATGATGTTGATGTTGC+TGG | 0.358023 | 2:+19696021 | MsG0280007726.01.T01:CDS |
| TGCGGCTGGCTAATAGGTTT+GGG | 0.360103 | 2:+19697659 | MsG0280007726.01.T01:CDS |
| TGCTGTTAGTTCATTGCCTT+CGG | 0.360797 | 2:+19696044 | MsG0280007726.01.T01:CDS |
| AGAAACCAGGGTGCTGAGGC+TGG | 0.374274 | 2:+19696579 | MsG0280007726.01.T01:CDS |
| GAGGAACAGTTCAATGCTTC+AGG | 0.374372 | 2:+19696651 | MsG0280007726.01.T01:CDS |
| TCATCTTGAATTTCACTAGA+AGG | 0.380602 | 2:-19696678 | None:intergenic |
| AGCAACTTAGAGGGAGGAAT+GGG | 0.381160 | 2:+19697737 | MsG0280007726.01.T01:CDS |
| GATTATCAAAATGCTTTAAC+GGG | 0.383033 | 2:-19695996 | None:intergenic |
| GTGGTTGAGGAGAGTGTTGT+GGG | 0.386273 | 2:+19695919 | MsG0280007726.01.T01:CDS |
| TGGTGATAACGTAGAAGAAT+TGG | 0.386738 | 2:+19696125 | MsG0280007726.01.T01:CDS |
| CTAGGGTTGCGCAGCAGCCA+CGG | 0.389819 | 2:+19697521 | MsG0280007726.01.T01:CDS |
| AGTGAGCTTGATTCCTCATC+TGG | 0.393385 | 2:+19697421 | MsG0280007726.01.T01:CDS |
| TTCTCTTTCATGTTATTCTC+AGG | 0.394149 | 2:-19697367 | None:intergenic |
| AGATTATCAAAATGCTTTAA+CGG | 0.405699 | 2:-19695997 | None:intergenic |
| ACCCCGCTTGTTCGTCCTGT+TGG | 0.408539 | 2:+19697463 | MsG0280007726.01.T01:CDS |
| CGTATCAAATTCAGAGCATC+TGG | 0.409650 | 2:+19696899 | MsG0280007726.01.T01:CDS |
| TAGTTCATTGCCTTCAGATT+CGG | 0.421641 | 2:+19696092 | MsG0280007726.01.T01:CDS |
| AGAGAAACTTCAAATGATTA+GGG | 0.425915 | 2:+19697627 | MsG0280007726.01.T01:CDS |
| CTGGTTTCTCATTTCCTCAT+CGG | 0.428605 | 2:-19696565 | None:intergenic |
| GGACTGGCTGAGCAACTTAG+AGG | 0.428821 | 2:+19697727 | MsG0280007726.01.T01:CDS |
| CATTACTGGAACCTGCTCCT+AGG | 0.444131 | 2:+19697503 | MsG0280007726.01.T01:CDS |
| GCAGCAGTTCCAAGGCCAAC+AGG | 0.449389 | 2:-19697478 | None:intergenic |
| GGTGGTTGAGGAGAGTGTTG+TGG | 0.449518 | 2:+19695918 | MsG0280007726.01.T01:CDS |
| GTCTTGTCATCTCCAACATC+AGG | 0.454684 | 2:-19696627 | None:intergenic |
| GCTTCCATCAGTGTTTAAAT+CGG | 0.455577 | 2:-19696364 | None:intergenic |
| CGTGGCTGCTGCGCAACCCT+AGG | 0.455654 | 2:-19697520 | None:intergenic |
| CTGAATCAGCTGCAGTAGCC+TGG | 0.463279 | 2:-19697037 | None:intergenic |
| TGCTGCGCAACCCTAGGAGC+AGG | 0.465414 | 2:-19697514 | None:intergenic |
| AGTGAAATTCAAGATGATAC+AGG | 0.466338 | 2:+19696684 | MsG0280007726.01.T01:CDS |
| TGATTGTAGTGGAGGAAAGG+AGG | 0.474011 | 2:+19696335 | MsG0280007726.01.T01:CDS |
| AGCAAAAGAACTTTCTGATA+GGG | 0.474144 | 2:-19696997 | None:intergenic |
| ATTACTGGAACCTGCTCCTA+GGG | 0.477039 | 2:+19697504 | MsG0280007726.01.T01:CDS |
| TGAGTATTTAGAACCTCGTC+AGG | 0.478313 | 2:+19696734 | MsG0280007726.01.T01:CDS |
| CTTTGTCATCTGTATCCTTG+TGG | 0.480341 | 2:-19696803 | None:intergenic |
| CGAGTCTCATCAGATTCCTC+AGG | 0.483717 | 2:-19697604 | None:intergenic |
| GATGGATAATGAAGGAGAAA+AGG | 0.491792 | 2:+19695879 | None:intergenic |
| CTAGGAGCAGGTTCCAGTAA+TGG | 0.502017 | 2:-19697502 | None:intergenic |
| GGCCAACAGGACGAACAAGC+GGG | 0.509500 | 2:-19697465 | None:intergenic |
| GGAGGAGTCTGTGGATCAGC+AGG | 0.509774 | 2:+19696230 | MsG0280007726.01.T01:CDS |
| ACTGCAGCTGATTCAGAAGA+AGG | 0.511631 | 2:+19697044 | MsG0280007726.01.T01:CDS |
| CAGATGCTCTGAATTTGATA+CGG | 0.517290 | 2:-19696898 | None:intergenic |
| TGAGGAATCGTATGGTATCA+AGG | 0.517359 | 2:+19696311 | MsG0280007726.01.T01:CDS |
| AGAAAAGTGATTGAAACCTC+TGG | 0.519662 | 2:+19696966 | MsG0280007726.01.T01:CDS |
| TAGGGTTGCGCAGCAGCCAC+GGG | 0.521176 | 2:+19697522 | MsG0280007726.01.T01:CDS |
| TTCCTCAGGCTCCGCAGTTG+AGG | 0.524205 | 2:-19697590 | None:intergenic |
| AGTAGGATCTTCTCTGGCCG+TGG | 0.524458 | 2:+19696938 | MsG0280007726.01.T01:CDS |
| TTTGTGACGCCTAGACAAAA+TGG | 0.527842 | 2:+19696468 | MsG0280007726.01.T01:CDS |
| GAGGGCAGAGACTTGGTGAA+TGG | 0.528172 | 2:+19696399 | MsG0280007726.01.T01:CDS |
| GAAGAATTTGGAAGGAGATG+AGG | 0.528525 | 2:+19695954 | MsG0280007726.01.T01:CDS |
| GTTTCAGGAGGGCAGAGACT+TGG | 0.529924 | 2:+19696392 | MsG0280007726.01.T01:CDS |
| CGATGAGGAAATGAGAAACC+AGG | 0.533492 | 2:+19696566 | MsG0280007726.01.T01:CDS |
| GGATGATTGTAGTGGAGGAA+AGG | 0.534840 | 2:+19696332 | MsG0280007726.01.T01:CDS |
| CTTCATTAGAAATCTCAGAC+TGG | 0.539648 | 2:-19697082 | None:intergenic |
| GCCTAGACAAAATGGTGGTA+TGG | 0.539860 | 2:+19696476 | MsG0280007726.01.T01:CDS |
| TGATTCAGAAGAAGGGAGTA+CGG | 0.541843 | 2:+19697052 | MsG0280007726.01.T01:CDS |
| GACTTGGTGAATGGAAACTC+AGG | 0.542609 | 2:+19696408 | MsG0280007726.01.T01:CDS |
| TGATACGGTGTCATCCTCCT+CGG | 0.545240 | 2:-19696883 | None:intergenic |
| GTATTTGAAAGAGAGTGGCT+TGG | 0.549260 | 2:+19696602 | MsG0280007726.01.T01:CDS |
| TGAAACAGTAGGATCTTCTC+TGG | 0.549299 | 2:+19696932 | MsG0280007726.01.T01:CDS |
| AGTTCTTTATAGATTAGGAC+TGG | 0.553445 | 2:+19697711 | MsG0280007726.01.T01:CDS |
| ATTTCTAATGAAGAAAATCA+AGG | 0.556458 | 2:+19697304 | MsG0280007726.01.T01:CDS |
| TGAAGGAGAAAAGGAGAGGG+GGG | 0.561154 | 2:+19695888 | MsG0280007726.01.T01:CDS |
| GGATACAGATGACAAAGAAA+CGG | 0.562233 | 2:+19696809 | MsG0280007726.01.T01:CDS |
| ATCAAGGATGATTGTAGTGG+AGG | 0.564329 | 2:+19696327 | MsG0280007726.01.T01:CDS |
| GTGGATTATATCAGGGCCAA+TGG | 0.565593 | 2:-19696784 | None:intergenic |
| CTCCTCAACTGCGGAGCCTG+AGG | 0.566977 | 2:+19697588 | MsG0280007726.01.T01:CDS |
| TAATGAGATACCGACTGTCC+AGG | 0.568358 | 2:+19697019 | MsG0280007726.01.T01:CDS |
| TAATGAAGGAGAAAAGGAGA+GGG | 0.570127 | 2:+19695885 | MsG0280007726.01.T01:CDS |
| GAAACAATTGATGAAACAGT+AGG | 0.575955 | 2:+19696921 | MsG0280007726.01.T01:CDS |
| GGAAAATGGAAGCACGAACA+AGG | 0.576504 | 2:+19696503 | MsG0280007726.01.T01:CDS |
| GAAACCAGGGTGCTGAGGCT+GGG | 0.576694 | 2:+19696580 | MsG0280007726.01.T01:CDS |
| GGTATCAAGGATGATTGTAG+TGG | 0.577582 | 2:+19696324 | MsG0280007726.01.T01:CDS |
| TGATAATCAGGAGGAGTCTG+TGG | 0.577797 | 2:+19696221 | MsG0280007726.01.T01:CDS |
| GAGCAACTTAGAGGGAGGAA+TGG | 0.578334 | 2:+19697736 | MsG0280007726.01.T01:CDS |
| AAGTGAGGAGATTGAAAATG+AGG | 0.579255 | 2:+19696437 | MsG0280007726.01.T01:CDS |
| AATGAGTCGAAGAATTTGGA+AGG | 0.586145 | 2:+19695946 | MsG0280007726.01.T01:CDS |
| GTGAAATTCAAGATGATACA+GGG | 0.586161 | 2:+19696685 | MsG0280007726.01.T01:CDS |
| TTGTGCTACAACAACATTGT+GGG | 0.588324 | 2:-19697689 | None:intergenic |
| AGTGGCTTGGATCCTGATGT+TGG | 0.588972 | 2:+19696615 | MsG0280007726.01.T01:CDS |
| ATGAAGGAGAAAAGGAGAGG+GGG | 0.590571 | 2:+19695887 | MsG0280007726.01.T01:CDS |
| TTAGCCGATTTAAACACTGA+TGG | 0.591442 | 2:+19696360 | MsG0280007726.01.T01:CDS |
| GCTGGGTATTTGAAAGAGAG+TGG | 0.596523 | 2:+19696597 | MsG0280007726.01.T01:CDS |
| AGGCCAACAGGACGAACAAG+CGG | 0.603613 | 2:-19697466 | None:intergenic |
| TATCCTTGTGGATTATATCA+GGG | 0.603810 | 2:-19696791 | None:intergenic |
| CTGCAGCTGATTCAGAAGAA+GGG | 0.611232 | 2:+19697045 | MsG0280007726.01.T01:CDS |
| GTAATGGAGCAGCAGTTCCA+AGG | 0.613696 | 2:-19697486 | None:intergenic |
| AATGAAGGAGAAAAGGAGAG+GGG | 0.614369 | 2:+19695886 | MsG0280007726.01.T01:CDS |
| GCTGCAGTAGCCTGGACAGT+CGG | 0.614540 | 2:-19697029 | None:intergenic |
| AATGAGAAACCAGGGTGCTG+AGG | 0.614665 | 2:+19696575 | MsG0280007726.01.T01:CDS |
| CCTCTCAGATCACTAAAGAA+CGG | 0.615346 | 2:+19697395 | MsG0280007726.01.T01:CDS |
| CAACTTAGAGGGAGGAATGG+GGG | 0.616857 | 2:+19697739 | MsG0280007726.01.T01:CDS |
| TGGAAGCACGGTGTTTCAGG+AGG | 0.618747 | 2:+19696380 | MsG0280007726.01.T01:CDS |
| CCGTTCTTTAGTGATCTGAG+AGG | 0.624237 | 2:-19697395 | None:intergenic |
| TGATTTGTGATGGATAATGA+AGG | 0.625119 | 2:+19695871 | None:intergenic |
| GAAGTGGAGGATGAGACCAT+TGG | 0.626104 | 2:+19696768 | MsG0280007726.01.T01:CDS |
| GCAACTTAGAGGGAGGAATG+GGG | 0.626304 | 2:+19697738 | MsG0280007726.01.T01:CDS |
| ATTTCATCAACCGAATCTGA+AGG | 0.627557 | 2:-19696102 | None:intergenic |
| TGAAGTGATTGATAATCAGG+AGG | 0.628119 | 2:+19696212 | MsG0280007726.01.T01:CDS |
| GCCAACAGGACGAACAAGCG+GGG | 0.631363 | 2:-19697464 | None:intergenic |
| CTTGTGCTACAACAACATTG+TGG | 0.633330 | 2:-19697690 | None:intergenic |
| GTAACTTGTGAGGAATCGTA+TGG | 0.633442 | 2:+19696303 | MsG0280007726.01.T01:CDS |
| GACTGGCTGAGCAACTTAGA+GGG | 0.634591 | 2:+19697728 | MsG0280007726.01.T01:CDS |
| AATACCCAGCCTCAGCACCC+TGG | 0.634888 | 2:-19696584 | None:intergenic |
| ATCAAAGCTAAACGCCAACA+CGG | 0.637973 | 2:-19697762 | None:intergenic |
| GCAACATCAACCAAATCCGA+AGG | 0.639342 | 2:-19696060 | None:intergenic |
| GGAAGCACGGTGTTTCAGGA+GGG | 0.642613 | 2:+19696381 | MsG0280007726.01.T01:CDS |
| AATGGAAGCACGAACAAGGT+GGG | 0.649339 | 2:+19696507 | MsG0280007726.01.T01:CDS |
| AAACTCAGGTTTGTCAAGTG+AGG | 0.652028 | 2:+19696422 | MsG0280007726.01.T01:CDS |
| ATAATGAAGGAGAAAAGGAG+AGG | 0.656200 | 2:+19695884 | MsG0280007726.01.T01:CDS |
| TTTAAACACTGATGGAAGCA+CGG | 0.657586 | 2:+19696368 | MsG0280007726.01.T01:CDS |
| GGTACTGAAGAGACTGAGGA+CGG | 0.659660 | 2:+19696279 | MsG0280007726.01.T01:CDS |
| TACAGAATTTGGATCCGATG+AGG | 0.666081 | 2:+19696551 | MsG0280007726.01.T01:CDS |
| GTTTGTGGAACGTCTGAACG+AGG | 0.670740 | 2:+19696182 | MsG0280007726.01.T01:CDS |
| AGATGGTACTGAAGAGACTG+AGG | 0.675363 | 2:+19696275 | MsG0280007726.01.T01:CDS |
| TGGCTGAGCAACTTAGAGGG+AGG | 0.681391 | 2:+19697731 | MsG0280007726.01.T01:CDS |
| TTGTAATGATGAAACCGAGG+AGG | 0.684954 | 2:+19696869 | MsG0280007726.01.T01:CDS |
| GATGAGGAAATGAGAAACCA+GGG | 0.685078 | 2:+19696567 | MsG0280007726.01.T01:CDS |
| TGGCCCTGATATAATCCACA+AGG | 0.686452 | 2:+19696788 | MsG0280007726.01.T01:CDS |
| AAATGGAAGCACGAACAAGG+TGG | 0.686726 | 2:+19696506 | MsG0280007726.01.T01:CDS |
| TGATAGGGAAGAGATACCAG+AGG | 0.688438 | 2:-19696982 | None:intergenic |
| TGAAATTCAAGATGATACAG+GGG | 0.693349 | 2:+19696686 | MsG0280007726.01.T01:CDS |
| TGAGGACGGAGTAACTTGTG+AGG | 0.695232 | 2:+19696293 | MsG0280007726.01.T01:CDS |
| AATGGAAGACTCCTCAACTG+CGG | 0.695801 | 2:+19697579 | MsG0280007726.01.T01:CDS |
| TTATTGTAATGATGAAACCG+AGG | 0.715588 | 2:+19696866 | MsG0280007726.01.T01:CDS |
| TTCAGAAGAAGGGAGTACGG+AGG | 0.722118 | 2:+19697055 | MsG0280007726.01.T01:CDS |
| GATACAGTATAATTGACCCG+TGG | 0.724591 | 2:-19697538 | None:intergenic |
| GTGACGCCTAGACAAAATGG+TGG | 0.729643 | 2:+19696471 | MsG0280007726.01.T01:CDS |
| TGTGCTACAACAACATTGTG+GGG | 0.734919 | 2:-19697688 | None:intergenic |
| TGTGGAACGTCTGAACGAGG+AGG | 0.736329 | 2:+19696185 | MsG0280007726.01.T01:CDS |
| TGTTGGAGATGACAAGACAG+AGG | 0.747242 | 2:+19696632 | MsG0280007726.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTATCAAAATGCTTTAA+CGG | - | Chr2:19696000-19696019 | None:intergenic | 20.0% |
| !! | ATTTCTAATGAAGAAAATCA+AGG | + | Chr2:19697092-19697111 | MsG0280007726.01.T01:intron | 20.0% |
| !!! | TTAAAGCATTTTGATAATCT+GGG | + | Chr2:19696000-19696019 | MsG0280007726.01.T01:CDS | 20.0% |
| ! | AGAGAAACTTCAAATGATTA+GGG | + | Chr2:19697627-19697646 | MsG0280007726.01.T01:CDS | 25.0% |
| ! | GATTATCAAAATGCTTTAAC+GGG | - | Chr2:19695999-19696018 | None:intergenic | 25.0% |
| !! | TTAGAAAAAGAGTTTTCTGA+TGG | - | Chr2:19697217-19697236 | None:intergenic | 25.0% |
| !!! | ATTGGATAATTTTCAAGAGT+CGG | + | Chr2:19696143-19696162 | MsG0280007726.01.T01:CDS | 25.0% |
| !!! | GTTAAAGCATTTTGATAATC+TGG | + | Chr2:19695999-19696018 | MsG0280007726.01.T01:CDS | 25.0% |
| AGCAAAAGAACTTTCTGATA+GGG | - | Chr2:19697000-19697019 | None:intergenic | 30.0% | |
| AGTGAAATTCAAGATGATAC+AGG | + | Chr2:19696684-19696703 | MsG0280007726.01.T01:CDS | 30.0% | |
| AGTTCTTTATAGATTAGGAC+TGG | + | Chr2:19697711-19697730 | MsG0280007726.01.T01:CDS | 30.0% | |
| ATCTAATGAGTCGAAGAATT+TGG | + | Chr2:19695942-19695961 | MsG0280007726.01.T01:CDS | 30.0% | |
| CATGAAAACTTATCTGTTGT+TGG | + | Chr2:19697110-19697129 | MsG0280007726.01.T01:intron | 30.0% | |
| GAAACAATTGATGAAACAGT+AGG | + | Chr2:19696921-19696940 | MsG0280007726.01.T01:CDS | 30.0% | |
| GAGAGAAACTTCAAATGATT+AGG | + | Chr2:19697626-19697645 | MsG0280007726.01.T01:CDS | 30.0% | |
| GCACAAGTTCTTTATAGATT+AGG | + | Chr2:19697706-19697725 | MsG0280007726.01.T01:CDS | 30.0% | |
| GTGAAATTCAAGATGATACA+GGG | + | Chr2:19696685-19696704 | MsG0280007726.01.T01:CDS | 30.0% | |
| TAATGAAAAATCGTCTGTTG+TGG | + | Chr2:19697330-19697349 | MsG0280007726.01.T01:CDS | 30.0% | |
| TAGCAAAAGAACTTTCTGAT+AGG | - | Chr2:19697001-19697020 | None:intergenic | 30.0% | |
| TCAGGAAAAATTTACAGAAG+TGG | + | Chr2:19696752-19696771 | MsG0280007726.01.T01:CDS | 30.0% | |
| TCATCTTGAATTTCACTAGA+AGG | - | Chr2:19696681-19696700 | None:intergenic | 30.0% | |
| TGAAATTCAAGATGATACAG+GGG | + | Chr2:19696686-19696705 | MsG0280007726.01.T01:CDS | 30.0% | |
| TTATTGTAATGATGAAACCG+AGG | + | Chr2:19696866-19696885 | MsG0280007726.01.T01:CDS | 30.0% | |
| TTCTCTTTCATGTTATTCTC+AGG | - | Chr2:19697370-19697389 | None:intergenic | 30.0% | |
| ! | AGATGAAGTGATTGATAATC+AGG | + | Chr2:19696209-19696228 | MsG0280007726.01.T01:CDS | 30.0% |
| ! | TATCCTTGTGGATTATATCA+GGG | - | Chr2:19696794-19696813 | None:intergenic | 30.0% |
| ! | TTATTCTCAGGTATCTTTTC+AGG | - | Chr2:19697358-19697377 | None:intergenic | 30.0% |
| !! | AATCACTTTTCTTTCATCCA+CGG | - | Chr2:19696958-19696977 | None:intergenic | 30.0% |
| AAGTGAGGAGATTGAAAATG+AGG | + | Chr2:19696437-19696456 | MsG0280007726.01.T01:CDS | 35.0% | |
| AATGAGTCGAAGAATTTGGA+AGG | + | Chr2:19695946-19695965 | MsG0280007726.01.T01:CDS | 35.0% | |
| AGAAAAGTGATTGAAACCTC+TGG | + | Chr2:19696966-19696985 | MsG0280007726.01.T01:CDS | 35.0% | |
| ATAATGAAGGAGAAAAGGAG+AGG | + | Chr2:19695884-19695903 | MsG0280007726.01.T01:CDS | 35.0% | |
| ATTTCATCAACCGAATCTGA+AGG | - | Chr2:19696105-19696124 | None:intergenic | 35.0% | |
| CTTCATTAGAAATCTCAGAC+TGG | - | Chr2:19697085-19697104 | None:intergenic | 35.0% | |
| GATGAGTTGCATACAGAATT+TGG | + | Chr2:19696540-19696559 | MsG0280007726.01.T01:CDS | 35.0% | |
| GCTTCCATCAGTGTTTAAAT+CGG | - | Chr2:19696367-19696386 | None:intergenic | 35.0% | |
| GGAAAAATTTACAGAAGTGG+AGG | + | Chr2:19696755-19696774 | MsG0280007726.01.T01:CDS | 35.0% | |
| GGATACAGATGACAAAGAAA+CGG | + | Chr2:19696809-19696828 | MsG0280007726.01.T01:CDS | 35.0% | |
| TAATACACAGTCCCAGAAAA+TGG | + | Chr2:19697561-19697580 | MsG0280007726.01.T01:CDS | 35.0% | |
| TAATGAAGGAGAAAAGGAGA+GGG | + | Chr2:19695885-19695904 | MsG0280007726.01.T01:CDS | 35.0% | |
| TAATGAGATGACATCTGTTC+AGG | + | Chr2:19697234-19697253 | MsG0280007726.01.T01:intron | 35.0% | |
| TAGTTCATTGCCTTCAGATT+CGG | + | Chr2:19696092-19696111 | MsG0280007726.01.T01:CDS | 35.0% | |
| TTGTGCTACAACAACATTGT+GGG | - | Chr2:19697692-19697711 | None:intergenic | 35.0% | |
| TTTAAACACTGATGGAAGCA+CGG | + | Chr2:19696368-19696387 | MsG0280007726.01.T01:CDS | 35.0% | |
| ! | ACAAAATGGTGGTATGGTTT+TGG | + | Chr2:19696482-19696501 | MsG0280007726.01.T01:CDS | 35.0% |
| ! | CAGATGCTCTGAATTTGATA+CGG | - | Chr2:19696901-19696920 | None:intergenic | 35.0% |
| ! | CTTCATTAGAAATCTGAGAC+AGG | - | Chr2:19697297-19697316 | None:intergenic | 35.0% |
| ! | GTATCCTTGTGGATTATATC+AGG | - | Chr2:19696795-19696814 | None:intergenic | 35.0% |
| ! | TCTGTAAATTTTTCCTGACG+AGG | - | Chr2:19696750-19696769 | None:intergenic | 35.0% |
| ! | TGAAGTGATTGATAATCAGG+AGG | + | Chr2:19696212-19696231 | MsG0280007726.01.T01:CDS | 35.0% |
| ! | TGATTAGGGTGAAGTTTTTG+CGG | + | Chr2:19697641-19697660 | MsG0280007726.01.T01:CDS | 35.0% |
| ! | TGGTGATAACGTAGAAGAAT+TGG | + | Chr2:19696125-19696144 | MsG0280007726.01.T01:CDS | 35.0% |
| ! | TTAGCCGATTTAAACACTGA+TGG | + | Chr2:19696360-19696379 | MsG0280007726.01.T01:CDS | 35.0% |
| !! | ATAATTTTCAAGAGTCGGTG+GGG | + | Chr2:19696148-19696167 | MsG0280007726.01.T01:CDS | 35.0% |
| !! | GATAATTTTCAAGAGTCGGT+GGG | + | Chr2:19696147-19696166 | MsG0280007726.01.T01:CDS | 35.0% |
| !! | TCAGATTCGGTTGATGAAAT+TGG | + | Chr2:19696105-19696124 | MsG0280007726.01.T01:CDS | 35.0% |
| AAACTCAGGTTTGTCAAGTG+AGG | + | Chr2:19696422-19696441 | MsG0280007726.01.T01:CDS | 40.0% | |
| AATGAAGGAGAAAAGGAGAG+GGG | + | Chr2:19695886-19695905 | MsG0280007726.01.T01:CDS | 40.0% | |
| ACTTTCCTTTCATCCAAAGC+CGG | - | Chr2:19697170-19697189 | None:intergenic | 40.0% | |
| AGAAGTGAAGCGATTGAAAC+AGG | + | Chr2:19697134-19697153 | MsG0280007726.01.T01:intron | 40.0% | |
| AGGAAAGTGACTGAAACTGT+CGG | + | Chr2:19697182-19697201 | MsG0280007726.01.T01:intron | 40.0% | |
| ATCAAGGATGATTGTAGTGG+AGG | + | Chr2:19696327-19696346 | MsG0280007726.01.T01:CDS | 40.0% | |
| CCTCTCAGATCACTAAAGAA+CGG | + | Chr2:19697395-19697414 | MsG0280007726.01.T01:CDS | 40.0% | |
| CTGGTTTCTCATTTCCTCAT+CGG | - | Chr2:19696568-19696587 | None:intergenic | 40.0% | |
| CTTGTGCTACAACAACATTG+TGG | - | Chr2:19697693-19697712 | None:intergenic | 40.0% | |
| CTTTGTCATCTGTATCCTTG+TGG | - | Chr2:19696806-19696825 | None:intergenic | 40.0% | |
| GAAGAATTTGGAAGGAGATG+AGG | + | Chr2:19695954-19695973 | MsG0280007726.01.T01:CDS | 40.0% | |
| GATACAGTATAATTGACCCG+TGG | - | Chr2:19697541-19697560 | None:intergenic | 40.0% | |
| GATGAGGAAATGAGAAACCA+GGG | + | Chr2:19696567-19696586 | MsG0280007726.01.T01:CDS | 40.0% | |
| GGTATCAAGGATGATTGTAG+TGG | + | Chr2:19696324-19696343 | MsG0280007726.01.T01:CDS | 40.0% | |
| GTATTTGAAAGAGAGTGGCT+TGG | + | Chr2:19696602-19696621 | MsG0280007726.01.T01:CDS | 40.0% | |
| TACAGAATTTGGATCCGATG+AGG | + | Chr2:19696551-19696570 | MsG0280007726.01.T01:CDS | 40.0% | |
| TAGTTCATTGCCTTCGGATT+TGG | + | Chr2:19696050-19696069 | MsG0280007726.01.T01:CDS | 40.0% | |
| TGAAACAGTAGGATCTTCTC+TGG | + | Chr2:19696932-19696951 | MsG0280007726.01.T01:CDS | 40.0% | |
| TGAGGAATCGTATGGTATCA+AGG | + | Chr2:19696311-19696330 | MsG0280007726.01.T01:CDS | 40.0% | |
| TGATTCAGAAGAAGGGAGTA+CGG | + | Chr2:19697052-19697071 | MsG0280007726.01.T01:CDS | 40.0% | |
| TGCTGTTAGTTCATTGCCTT+CGG | + | Chr2:19696044-19696063 | MsG0280007726.01.T01:CDS | 40.0% | |
| TGTGCTACAACAACATTGTG+GGG | - | Chr2:19697691-19697710 | None:intergenic | 40.0% | |
| TTGTAATGATGAAACCGAGG+AGG | + | Chr2:19696869-19696888 | MsG0280007726.01.T01:CDS | 40.0% | |
| TTTGTGACGCCTAGACAAAA+TGG | + | Chr2:19696468-19696487 | MsG0280007726.01.T01:CDS | 40.0% | |
| ! | ACCATACCACCATTTTGTCT+AGG | - | Chr2:19696480-19696499 | None:intergenic | 40.0% |
| ! | AGCAACAGATTTTCCAGATG+AGG | - | Chr2:19697437-19697456 | None:intergenic | 40.0% |
| ! | CGTATCAAATTCAGAGCATC+TGG | + | Chr2:19696899-19696918 | MsG0280007726.01.T01:CDS | 40.0% |
| ! | CTTTACAGCGCTTTTCTAGA+TGG | + | Chr2:19696258-19696277 | MsG0280007726.01.T01:CDS | 40.0% |
| ! | GTAACTTGTGAGGAATCGTA+TGG | + | Chr2:19696303-19696322 | MsG0280007726.01.T01:CDS | 40.0% |
| ! | TGAGGAGTCTTCCATTTTCT+GGG | - | Chr2:19697575-19697594 | None:intergenic | 40.0% |
| ! | TGAGTATTTAGAACCTCGTC+AGG | + | Chr2:19696734-19696753 | MsG0280007726.01.T01:CDS | 40.0% |
| ! | TGATTCAGAAGGGAGTACAA+AGG | + | Chr2:19697267-19697286 | MsG0280007726.01.T01:intron | 40.0% |
| ! | TTGAGGAGTCTTCCATTTTC+TGG | - | Chr2:19697576-19697595 | None:intergenic | 40.0% |
| !! | GGATAATTTTCAAGAGTCGG+TGG | + | Chr2:19696146-19696165 | MsG0280007726.01.T01:CDS | 40.0% |
| !! | TAATTTTCAAGAGTCGGTGG+GGG | + | Chr2:19696149-19696168 | MsG0280007726.01.T01:CDS | 40.0% |
| !!! | GGTGGTATGGTTTTGGAAAA+TGG | + | Chr2:19696489-19696508 | MsG0280007726.01.T01:CDS | 40.0% |
| AATGGAAGACTCCTCAACTG+CGG | + | Chr2:19697579-19697598 | MsG0280007726.01.T01:CDS | 45.0% | |
| AGCAACTTAGAGGGAGGAAT+GGG | + | Chr2:19697737-19697756 | MsG0280007726.01.T01:CDS | 45.0% | |
| AGTGAAGCGATTGAAACAGG+AGG | + | Chr2:19697137-19697156 | MsG0280007726.01.T01:intron | 45.0% | |
| AGTGAGCTTGATTCCTCATC+TGG | + | Chr2:19697421-19697440 | MsG0280007726.01.T01:CDS | 45.0% | |
| ATGAAGGAGAAAAGGAGAGG+GGG | + | Chr2:19695887-19695906 | MsG0280007726.01.T01:CDS | 45.0% | |
| ATTACTGGAACCTGCTCCTA+GGG | + | Chr2:19697504-19697523 | MsG0280007726.01.T01:CDS | 45.0% | |
| CCGTTCTTTAGTGATCTGAG+AGG | - | Chr2:19697398-19697417 | None:intergenic | 45.0% | |
| CGATGAGGAAATGAGAAACC+AGG | + | Chr2:19696566-19696585 | MsG0280007726.01.T01:CDS | 45.0% | |
| GAGGAACAGTTCAATGCTTC+AGG | + | Chr2:19696651-19696670 | MsG0280007726.01.T01:CDS | 45.0% | |
| GCAACATCAACCAAATCCGA+AGG | - | Chr2:19696063-19696082 | None:intergenic | 45.0% | |
| GCCTAGACAAAATGGTGGTA+TGG | + | Chr2:19696476-19696495 | MsG0280007726.01.T01:CDS | 45.0% | |
| GCTGGGTATTTGAAAGAGAG+TGG | + | Chr2:19696597-19696616 | MsG0280007726.01.T01:CDS | 45.0% | |
| GTCTTGTCATCTCCAACATC+AGG | - | Chr2:19696630-19696649 | None:intergenic | 45.0% | |
| TGAAACAGGAGGATCTTCTC+CGG | + | Chr2:19697148-19697167 | MsG0280007726.01.T01:intron | 45.0% | |
| TGATAATCAGGAGGAGTCTG+TGG | + | Chr2:19696221-19696240 | MsG0280007726.01.T01:CDS | 45.0% | |
| TGATAGGGAAGAGATACCAG+AGG | - | Chr2:19696985-19697004 | None:intergenic | 45.0% | |
| TGGCCCTGATATAATCCACA+AGG | + | Chr2:19696788-19696807 | MsG0280007726.01.T01:CDS | 45.0% | |
| TGTTGGAGATGACAAGACAG+AGG | + | Chr2:19696632-19696651 | MsG0280007726.01.T01:CDS | 45.0% | |
| ! | AAATGGAAGCACGAACAAGG+TGG | + | Chr2:19696506-19696525 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | AATGGAAGCACGAACAAGGT+GGG | + | Chr2:19696507-19696526 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | ACTGCAGCTGATTCAGAAGA+AGG | + | Chr2:19697044-19697063 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | AGATGGTACTGAAGAGACTG+AGG | + | Chr2:19696275-19696294 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | CTACTGCAGCTGATTCAGAA+GGG | + | Chr2:19697042-19697061 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | CTGCAGCTGATTCAGAAGAA+GGG | + | Chr2:19697045-19697064 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | GGAAAATGGAAGCACGAACA+AGG | + | Chr2:19696503-19696522 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | GGATGATTGTAGTGGAGGAA+AGG | + | Chr2:19696332-19696351 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | GGTGATGATGTTGATGTTGC+TGG | + | Chr2:19696021-19696040 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | GTGGATTATATCAGGGCCAA+TGG | - | Chr2:19696787-19696806 | None:intergenic | 45.0% |
| ! | TAATGAGATACCGACTGTCC+AGG | + | Chr2:19697019-19697038 | MsG0280007726.01.T01:CDS | 45.0% |
| ! | TGATTGTAGTGGAGGAAAGG+AGG | + | Chr2:19696335-19696354 | MsG0280007726.01.T01:CDS | 45.0% |
| !! | AGTTTTTGCGGCTGGCTAAT+AGG | + | Chr2:19697653-19697672 | MsG0280007726.01.T01:CDS | 45.0% |
| !! | GACTTGGTGAATGGAAACTC+AGG | + | Chr2:19696408-19696427 | MsG0280007726.01.T01:CDS | 45.0% |
| AAAAGGAGAGGGGGGATGTT+GGG | + | Chr2:19695896-19695915 | MsG0280007726.01.T01:CDS | 50.0% | |
| CAACTTAGAGGGAGGAATGG+GGG | + | Chr2:19697739-19697758 | MsG0280007726.01.T01:CDS | 50.0% | |
| CATTACTGGAACCTGCTCCT+AGG | + | Chr2:19697503-19697522 | MsG0280007726.01.T01:CDS | 50.0% | |
| CGAGTCTCATCAGATTCCTC+AGG | - | Chr2:19697607-19697626 | None:intergenic | 50.0% | |
| CTAGGAGCAGGTTCCAGTAA+TGG | - | Chr2:19697505-19697524 | None:intergenic | 50.0% | |
| GAAGTGGAGGATGAGACCAT+TGG | + | Chr2:19696768-19696787 | MsG0280007726.01.T01:CDS | 50.0% | |
| GAGCAACTTAGAGGGAGGAA+TGG | + | Chr2:19697736-19697755 | MsG0280007726.01.T01:CDS | 50.0% | |
| GCAACTTAGAGGGAGGAATG+GGG | + | Chr2:19697738-19697757 | MsG0280007726.01.T01:CDS | 50.0% | |
| GTGACGCCTAGACAAAATGG+TGG | + | Chr2:19696471-19696490 | MsG0280007726.01.T01:CDS | 50.0% | |
| GTTTGTGGAACGTCTGAACG+AGG | + | Chr2:19696182-19696201 | MsG0280007726.01.T01:CDS | 50.0% | |
| TGAAGGAGAAAAGGAGAGGG+GGG | + | Chr2:19695888-19695907 | MsG0280007726.01.T01:CDS | 50.0% | |
| TGGAACTGCTGCTCCATTAC+TGG | + | Chr2:19697489-19697508 | MsG0280007726.01.T01:CDS | 50.0% | |
| ! | AGTGGCTTGGATCCTGATGT+TGG | + | Chr2:19696615-19696634 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GACTGGCTGAGCAACTTAGA+GGG | + | Chr2:19697728-19697747 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GCTACTGCAGCTGATTCAGA+AGG | + | Chr2:19697041-19697060 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GGAAGGAGATGAGGTTTTCG+AGG | + | Chr2:19695963-19695982 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GGGGGTTGTTGATGAGTTTG+TGG | + | Chr2:19696167-19696186 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GGTACTGAAGAGACTGAGGA+CGG | + | Chr2:19696279-19696298 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | GTAATGGAGCAGCAGTTCCA+AGG | - | Chr2:19697489-19697508 | None:intergenic | 50.0% |
| ! | TAGGGTGAAGTTTTTGCGGC+TGG | + | Chr2:19697645-19697664 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | TGAGGACGGAGTAACTTGTG+AGG | + | Chr2:19696293-19696312 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | TGATGGAAGCACGGTGTTTC+AGG | + | Chr2:19696377-19696396 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | TGCGGCTGGCTAATAGGTTT+GGG | + | Chr2:19697659-19697678 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | TTCAGAAGAAGGGAGTACGG+AGG | + | Chr2:19697055-19697074 | MsG0280007726.01.T01:CDS | 50.0% |
| ! | TTGCGGCTGGCTAATAGGTT+TGG | + | Chr2:19697658-19697677 | MsG0280007726.01.T01:CDS | 50.0% |
| !! | AATGAGAAACCAGGGTGCTG+AGG | + | Chr2:19696575-19696594 | MsG0280007726.01.T01:CDS | 50.0% |
| !! | AGGAGATGAGGTTTTCGAGG+AGG | + | Chr2:19695966-19695985 | MsG0280007726.01.T01:CDS | 50.0% |
| !! | CTTCTCCGGCTTTGGATGAA+AGG | + | Chr2:19697162-19697181 | MsG0280007726.01.T01:intron | 50.0% |
| !! | GTGGTTGAGGAGAGTGTTGT+GGG | + | Chr2:19695919-19695938 | MsG0280007726.01.T01:CDS | 50.0% |
| !! | TGATACGGTGTCATCCTCCT+CGG | - | Chr2:19696886-19696905 | None:intergenic | 50.0% |
| AAAGGAGAGGGGGGATGTTG+GGG | + | Chr2:19695897-19695916 | MsG0280007726.01.T01:CDS | 55.0% | |
| AGGAGGATCTTCTCCGGCTT+TGG | + | Chr2:19697154-19697173 | MsG0280007726.01.T01:intron | 55.0% | |
| AGGCCAACAGGACGAACAAG+CGG | - | Chr2:19697469-19697488 | None:intergenic | 55.0% | |
| AGTAGGATCTTCTCTGGCCG+TGG | + | Chr2:19696938-19696957 | MsG0280007726.01.T01:CDS | 55.0% | |
| CTGAATCAGCTGCAGTAGCC+TGG | - | Chr2:19697040-19697059 | None:intergenic | 55.0% | |
| GAAAAGGAGAGGGGGGATGT+TGG | + | Chr2:19695895-19695914 | MsG0280007726.01.T01:CDS | 55.0% | |
| GTTTCAGGAGGGCAGAGACT+TGG | + | Chr2:19696392-19696411 | MsG0280007726.01.T01:CDS | 55.0% | |
| TGGCTGAGCAACTTAGAGGG+AGG | + | Chr2:19697731-19697750 | MsG0280007726.01.T01:CDS | 55.0% | |
| TGTGGAACGTCTGAACGAGG+AGG | + | Chr2:19696185-19696204 | MsG0280007726.01.T01:CDS | 55.0% | |
| ! | CTTGTTCGTCCTGTTGGCCT+TGG | + | Chr2:19697469-19697488 | MsG0280007726.01.T01:CDS | 55.0% |
| ! | GGAAGCACGGTGTTTCAGGA+GGG | + | Chr2:19696381-19696400 | MsG0280007726.01.T01:CDS | 55.0% |
| ! | TGGAAGCACGGTGTTTCAGG+AGG | + | Chr2:19696380-19696399 | MsG0280007726.01.T01:CDS | 55.0% |
| !! | GAGGGCAGAGACTTGGTGAA+TGG | + | Chr2:19696399-19696418 | MsG0280007726.01.T01:CDS | 55.0% |
| !! | GGACTGGCTGAGCAACTTAG+AGG | + | Chr2:19697727-19697746 | MsG0280007726.01.T01:CDS | 55.0% |
| !! | GGTGGTTGAGGAGAGTGTTG+TGG | + | Chr2:19695918-19695937 | MsG0280007726.01.T01:CDS | 55.0% |
| AATACCCAGCCTCAGCACCC+TGG | - | Chr2:19696587-19696606 | None:intergenic | 60.0% | |
| ACCCCGCTTGTTCGTCCTGT+TGG | + | Chr2:19697463-19697482 | MsG0280007726.01.T01:CDS | 60.0% | |
| GCAGCAGTTCCAAGGCCAAC+AGG | - | Chr2:19697481-19697500 | None:intergenic | 60.0% | |
| GCCAACAGGACGAACAAGCG+GGG | - | Chr2:19697467-19697486 | None:intergenic | 60.0% | |
| GCTGCAGTAGCCTGGACAGT+CGG | - | Chr2:19697032-19697051 | None:intergenic | 60.0% | |
| GGAGGAGTCTGTGGATCAGC+AGG | + | Chr2:19696230-19696249 | MsG0280007726.01.T01:CDS | 60.0% | |
| GGCCAACAGGACGAACAAGC+GGG | - | Chr2:19697468-19697487 | None:intergenic | 60.0% | |
| TTCCTCAGGCTCCGCAGTTG+AGG | - | Chr2:19697593-19697612 | None:intergenic | 60.0% | |
| !! | AGAAACCAGGGTGCTGAGGC+TGG | + | Chr2:19696579-19696598 | MsG0280007726.01.T01:CDS | 60.0% |
| !! | GAAACCAGGGTGCTGAGGCT+GGG | + | Chr2:19696580-19696599 | MsG0280007726.01.T01:CDS | 60.0% |
| CTAGGGTTGCGCAGCAGCCA+CGG | + | Chr2:19697521-19697540 | MsG0280007726.01.T01:CDS | 65.0% | |
| CTCCTCAACTGCGGAGCCTG+AGG | + | Chr2:19697588-19697607 | MsG0280007726.01.T01:CDS | 65.0% | |
| GGGGGATGTTGGGGTGGTTG+AGG | + | Chr2:19695906-19695925 | MsG0280007726.01.T01:CDS | 65.0% | |
| TAGGGTTGCGCAGCAGCCAC+GGG | + | Chr2:19697522-19697541 | MsG0280007726.01.T01:CDS | 65.0% | |
| TGCTGCGCAACCCTAGGAGC+AGG | - | Chr2:19697517-19697536 | None:intergenic | 65.0% | |
| CGTGGCTGCTGCGCAACCCT+AGG | - | Chr2:19697523-19697542 | None:intergenic | 70.0% | |
| GGAGAGGGGGGATGTTGGGG+TGG | + | Chr2:19695900-19695919 | MsG0280007726.01.T01:CDS | 70.0% | |
| GGGAGGAATGGGGGCCGTGT+TGG | + | Chr2:19697748-19697767 | MsG0280007726.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 19695880 | 19697777 | 19695880 | ID=MsG0280007726.01;Name=MsG0280007726.01 |
| Chr2 | mRNA | 19695880 | 19697777 | 19695880 | ID=MsG0280007726.01.T01;Parent=MsG0280007726.01;Name=MsG0280007726.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|0|0|2|0|561 |
| Chr2 | exon | 19695880 | 19697091 | 19695880 | ID=MsG0280007726.01.T01:exon:1842;Parent=MsG0280007726.01.T01 |
| Chr2 | exon | 19697304 | 19697777 | 19697304 | ID=MsG0280007726.01.T01:exon:1843;Parent=MsG0280007726.01.T01 |
| Chr2 | CDS | 19695880 | 19697091 | 19695880 | ID=MsG0280007726.01.T01:cds;Parent=MsG0280007726.01.T01 |
| Chr2 | CDS | 19697304 | 19697777 | 19697304 | ID=MsG0280007726.01.T01:cds;Parent=MsG0280007726.01.T01 |
| Gene Sequence |
| Protein sequence |
