AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045165.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045165.01.T01 MTR_8g066720 97.861 374 7 1 1 373 1 374 0.0 743
MsG0880045165.01.T01 MTR_4g105690 49.841 315 142 5 9 319 10 312 6.46e-103 306
MsG0880045165.01.T01 MTR_1g105930 42.813 327 161 7 8 325 32 341 9.69e-84 258
MsG0880045165.01.T01 MTR_5g005370 42.006 319 166 6 8 322 13 316 2.66e-76 238
MsG0880045165.01.T01 MTR_5g005370 42.188 320 164 7 8 322 13 316 1.16e-75 239
MsG0880045165.01.T01 MTR_5g005370 41.562 320 155 9 8 322 13 305 6.53e-70 222
MsG0880045165.01.T01 MTR_5g005370 41.695 295 153 6 32 322 2 281 1.38e-67 215
MsG0880045165.01.T01 MTR_5g005370 41.414 297 155 6 30 322 7 288 2.48e-67 214
MsG0880045165.01.T01 MTR_1g105930 41.729 266 129 7 69 325 63 311 1.85e-58 192
MsG0880045165.01.T01 MTR_3g067725 25.387 323 207 10 4 305 158 467 1.50e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045165.01.T01 AT5G16760 58.095 315 124 4 8 322 10 316 5.31e-127 368
MsG0880045165.01.T01 AT4G08170 44.582 323 161 6 4 322 38 346 1.62e-88 271
MsG0880045165.01.T01 AT4G33770 41.905 315 162 6 8 318 82 379 2.86e-77 243
MsG0880045165.01.T01 AT4G33770 41.379 290 149 6 33 318 14 286 1.04e-69 221
MsG0880045165.01.T01 AT4G08170 43.609 266 132 6 61 322 7 258 3.14e-68 216
MsG0880045165.01.T01 AT4G08170 43.534 232 113 6 96 323 1 218 2.54e-55 181
MsG0880045165.01.T01 AT4G08170 43.534 232 113 6 96 323 1 218 2.54e-55 181
MsG0880045165.01.T01 AT4G08170 43.534 232 113 6 96 323 1 218 2.54e-55 181
MsG0880045165.01.T01 AT4G08170 43.534 232 113 6 96 323 1 218 2.54e-55 181
MsG0880045165.01.T01 AT4G08170 43.534 232 113 6 96 323 1 218 2.54e-55 181
MsG0880045165.01.T01 AT4G33770 40.969 227 113 6 96 318 1 210 8.07e-46 157

Find 90 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACGGTCCTTGATCGATTA+AGG 0.193555 8:+55078181 None:intergenic
TTGGGAGAGTTTAAAGTTTC+CGG 0.228751 8:-55077907 MsG0880045165.01.T01:CDS
CTGAGCTTAGGGTTAGGGTT+GGG 0.247742 8:-55078013 MsG0880045165.01.T01:CDS
CATAAATCACGATCTGTTTC+GGG 0.253527 8:+55077958 None:intergenic
TCATAAATCACGATCTGTTT+CGG 0.307302 8:+55077957 None:intergenic
AGGGTTTGGTTGAATCGATT+TGG 0.308710 8:+55078201 None:intergenic
GAAAAGAAACACGGTGTAAT+AGG 0.310305 8:-55078308 MsG0880045165.01.T01:CDS
TAACCGAATTTCAATGCTTC+AGG 0.312842 8:-55078042 MsG0880045165.01.T01:CDS
TGAGCTTAGGGTTAGGGTTG+GGG 0.323983 8:-55078012 MsG0880045165.01.T01:CDS
AAGCGCGAAATCGCATAAAA+TGG 0.333115 8:-55077856 MsG0880045165.01.T01:CDS
ATTGATATTAATTACTTTCC+AGG 0.339891 8:-55077438 MsG0880045165.01.T01:CDS
TTGTTTCTGAGCTTAGGGTT+AGG 0.343936 8:-55078019 MsG0880045165.01.T01:CDS
TCCTTGATCGATTAAGGGTT+TGG 0.350560 8:+55078187 None:intergenic
AGGGTTGGGGTTGATGAAAA+AGG 0.360059 8:-55077999 MsG0880045165.01.T01:CDS
TGTTTCTGAGCTTAGGGTTA+GGG 0.363650 8:-55078018 MsG0880045165.01.T01:CDS
TCAGGTTGTTTCTGAGCTTA+GGG 0.365845 8:-55078024 MsG0880045165.01.T01:CDS
GGAGAAGGTGTTGGGTGTTT+CGG 0.367359 8:-55077682 MsG0880045165.01.T01:CDS
CTCTTTCTGATGGTCAGGCT+TGG 0.368219 8:-55077926 MsG0880045165.01.T01:CDS
GCGTCGAGGATAACAGCATT+AGG 0.370797 8:+55078089 None:intergenic
TTCAGGTTGTTTCTGAGCTT+AGG 0.380717 8:-55078025 MsG0880045165.01.T01:CDS
AATCGTCGCCGTAGAGTTTG+TGG 0.389966 8:+55078147 None:intergenic
AGGTGTCGAATTTGGCGAAT+AGG 0.390772 8:-55077638 MsG0880045165.01.T01:CDS
CGTGAAGAGGAAGTCTTTAC+CGG 0.394637 8:-55077715 MsG0880045165.01.T01:CDS
CAACCTGAAGCATTGAAATT+CGG 0.403669 8:+55078039 None:intergenic
AACGGTCCTTGATCGATTAA+GGG 0.404496 8:+55078182 None:intergenic
ACAAATTCCTGCAAAACAAT+AGG 0.415605 8:+55077792 None:intergenic
GGTGTCGAATTTGGCGAATA+GGG 0.420308 8:-55077637 MsG0880045165.01.T01:CDS
TGAAGACGCTCAATCGCTTC+CGG 0.428110 8:+55078065 None:intergenic
GTTTCTGAGGAGAAGGTGTT+GGG 0.434384 8:-55077690 MsG0880045165.01.T01:CDS
TCTTTCTGATGGTCAGGCTT+GGG 0.434503 8:-55077925 MsG0880045165.01.T01:CDS
CGTCGAGGATAACAGCATTA+GGG 0.435245 8:+55078090 None:intergenic
AGAGACTCTTTCTGATGGTC+AGG 0.437751 8:-55077931 MsG0880045165.01.T01:CDS
GTGATTCGTGATTCTAGATA+TGG 0.443007 8:-55077477 MsG0880045165.01.T01:CDS
GTGATTCTAGATATGGTAAT+CGG 0.451796 8:-55077470 MsG0880045165.01.T01:CDS
TTGCAGGAATTTGTGAATCA+TGG 0.462425 8:-55077783 MsG0880045165.01.T01:CDS
CCAGGGTATGCTAAAATGCC+GGG 0.463616 8:-55077420 MsG0880045165.01.T01:CDS
GAAGGAGGTGGGTGAAAATG+TGG 0.463683 8:-55077352 MsG0880045165.01.T01:CDS
TCTGAGCTTAGGGTTAGGGT+TGG 0.465651 8:-55078014 MsG0880045165.01.T01:CDS
TAATTCCGCGTGATGAAGCT+AGG 0.466617 8:+55078231 None:intergenic
ACAAACTCTACGGCGACGAT+TGG 0.468878 8:-55078145 MsG0880045165.01.T01:CDS
TCCAGGGTATGCTAAAATGC+CGG 0.479177 8:-55077421 MsG0880045165.01.T01:CDS
GAATTTGAAATTGTTGAAGC+TGG 0.486045 8:+55078117 None:intergenic
GGAAAGGGTCATGGTGATGA+GGG 0.487881 8:-55077330 MsG0880045165.01.T01:CDS
CGTCGATTTAATGTGCAAGA+AGG 0.494147 8:-55077370 MsG0880045165.01.T01:CDS
GTGGGTGAAAATGTGGGAAA+GGG 0.497761 8:-55077345 MsG0880045165.01.T01:CDS
GTCAAAACTTTCTCATACCC+CGG 0.499509 8:+55077402 None:intergenic
TCCATCGGCCACCAACGGCT+TGG 0.502382 8:+55077878 None:intergenic
TTTATTGTTGATATTGCCAG+TGG 0.502693 8:-55077540 MsG0880045165.01.T01:CDS
TTGATATTAATTACTTTCCA+GGG 0.504005 8:-55077437 MsG0880045165.01.T01:CDS
GGTGATAGCCAAGCCGTTGG+TGG 0.505993 8:-55077886 MsG0880045165.01.T01:CDS
ACCGGATGTTTCTGAGGAGA+AGG 0.506747 8:-55077697 MsG0880045165.01.T01:CDS
GCGCTTCCATCGGCCACCAA+CGG 0.508538 8:+55077873 None:intergenic
ATGCGATTTCGCGCTTCCAT+CGG 0.510779 8:+55077863 None:intergenic
TGCTGTTATCCTCGACGCGC+CGG 0.514143 8:-55078084 MsG0880045165.01.T01:CDS
TTTAATGTGCAAGAAGGAGG+TGG 0.519302 8:-55077364 MsG0880045165.01.T01:CDS
GAAAATGTGGGAAAGGGTCA+TGG 0.529340 8:-55077339 MsG0880045165.01.T01:CDS
ACCAAACCCTTAATCGATCA+AGG 0.529800 8:-55078188 MsG0880045165.01.T01:CDS
GGGAAAGGGTCATGGTGATG+AGG 0.530017 8:-55077331 MsG0880045165.01.T01:CDS
GCCAAGCCGTTGGTGGCCGA+TGG 0.532235 8:-55077879 MsG0880045165.01.T01:CDS
TACTACTGAGATGCCACCTC+AGG 0.533467 8:-55077565 MsG0880045165.01.T01:CDS
CATAGCACGCCTCAATCCAC+TGG 0.536550 8:+55077524 None:intergenic
TGTTTCTGAGGAGAAGGTGT+TGG 0.537995 8:-55077691 MsG0880045165.01.T01:CDS
GGTGGGTGAAAATGTGGGAA+AGG 0.539421 8:-55077346 MsG0880045165.01.T01:CDS
TTGATATTGCCAGTGGATTG+AGG 0.540672 8:-55077533 MsG0880045165.01.T01:CDS
GAAGGTGTTGGGTGTTTCGG+AGG 0.540674 8:-55077679 MsG0880045165.01.T01:CDS
ACCTTCTCCTCAGAAACATC+CGG 0.547331 8:+55077696 None:intergenic
GTCTTTACCGGATGTTTCTG+AGG 0.553032 8:-55077703 MsG0880045165.01.T01:CDS
ATCATGTTCGTTGCGTGAAG+AGG 0.555788 8:-55077728 MsG0880045165.01.T01:CDS
TGGTGATGAGGGTAAAGTTG+AGG 0.558814 8:-55077319 MsG0880045165.01.T01:CDS
CAATCGCTTCCGGCGCGTCG+AGG 0.561052 8:+55078075 None:intergenic
ACCAACGGCTTGGCTATCAC+CGG 0.561956 8:+55077888 None:intergenic
TGCATCCTCCACAAACTCTA+CGG 0.564378 8:-55078155 MsG0880045165.01.T01:CDS
AAGGAGGTGGGTGAAAATGT+GGG 0.565153 8:-55077351 MsG0880045165.01.T01:CDS
TCCGGTGATAGCCAAGCCGT+TGG 0.572340 8:-55077889 MsG0880045165.01.T01:CDS
GATAAAGAGACTCTTTCTGA+TGG 0.578931 8:-55077936 MsG0880045165.01.T01:CDS
CGATTTAATGTGCAAGAAGG+AGG 0.591453 8:-55077367 MsG0880045165.01.T01:CDS
AATTCCGCGTGATGAAGCTA+GGG 0.593077 8:+55078232 None:intergenic
TTTGGCGAATAGGGATAGTG+TGG 0.627810 8:-55077628 MsG0880045165.01.T01:CDS
AATTCCTGCAAAACAATAGG+CGG 0.644595 8:+55077795 None:intergenic
TTAATGTGCAAGAAGGAGGT+GGG 0.645733 8:-55077363 MsG0880045165.01.T01:CDS
CAGGAATTTGTGAATCATGG+TGG 0.650492 8:-55077780 MsG0880045165.01.T01:CDS
TTGTGGAGGATGCAATCGAA+CGG 0.658727 8:+55078164 None:intergenic
CCAATGGCTGAAAAGAAACA+CGG 0.663196 8:-55078317 MsG0880045165.01.T01:CDS
TCAACAATAAAAGCCTGAGG+TGG 0.663927 8:+55077552 None:intergenic
TCAGCTTATTCAACGCCCCG+TGG 0.664928 8:+55077820 None:intergenic
CAGGGTATGCTAAAATGCCG+GGG 0.680216 8:-55077419 MsG0880045165.01.T01:CDS
CGTCGCCGTAGAGTTTGTGG+AGG 0.694812 8:+55078150 None:intergenic
ATATCAACAATAAAAGCCTG+AGG 0.716899 8:+55077549 None:intergenic
TTAACCCTAGCTTCATCACG+CGG 0.741697 8:-55078236 MsG0880045165.01.T01:CDS
CTAGGGTTAAGAGTGAGTCG+CGG 0.746406 8:+55078249 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAAGATAAATCTGTTA+AGG - Chr8:55078243-55078262 MsG0880045165.01.T01:CDS 20.0%
!! ATTGATATTAATTACTTTCC+AGG - Chr8:55078091-55078110 MsG0880045165.01.T01:CDS 20.0%
!! TTGATATTAATTACTTTCCA+GGG - Chr8:55078092-55078111 MsG0880045165.01.T01:CDS 20.0%
!! GTTTTATAAGATGATGAGTT+TGG - Chr8:55077937-55077956 MsG0880045165.01.T01:CDS 25.0%
!!! ATGAAACTGTTTTGTTTCTT+TGG + Chr8:55077260-55077279 None:intergenic 25.0%
!!! ATTTTTAAGGTGTATGTTGT+TGG - Chr8:55077776-55077795 MsG0880045165.01.T01:CDS 25.0%
!!! TTTTTAAGGTGTATGTTGTT+GGG - Chr8:55077777-55077796 MsG0880045165.01.T01:CDS 25.0%
ACAAATTCCTGCAAAACAAT+AGG + Chr8:55077740-55077759 None:intergenic 30.0%
ATATCAACAATAAAAGCCTG+AGG + Chr8:55077983-55078002 None:intergenic 30.0%
GTGATTCTAGATATGGTAAT+CGG - Chr8:55078059-55078078 MsG0880045165.01.T01:CDS 30.0%
TCATAAATCACGATCTGTTT+CGG + Chr8:55077575-55077594 None:intergenic 30.0%
TTTATTGTTGATATTGCCAG+TGG - Chr8:55077989-55078008 MsG0880045165.01.T01:CDS 30.0%
! GAATTTGAAATTGTTGAAGC+TGG + Chr8:55077415-55077434 None:intergenic 30.0%
AATTCCTGCAAAACAATAGG+CGG + Chr8:55077737-55077756 None:intergenic 35.0%
CATAAATCACGATCTGTTTC+GGG + Chr8:55077574-55077593 None:intergenic 35.0%
GAAAAGAAACACGGTGTAAT+AGG - Chr8:55077221-55077240 MsG0880045165.01.T01:CDS 35.0%
GATAAAGAGACTCTTTCTGA+TGG - Chr8:55077593-55077612 MsG0880045165.01.T01:CDS 35.0%
GTGATTCGTGATTCTAGATA+TGG - Chr8:55078052-55078071 MsG0880045165.01.T01:CDS 35.0%
TAACCGAATTTCAATGCTTC+AGG - Chr8:55077487-55077506 MsG0880045165.01.T01:CDS 35.0%
TTGCAGGAATTTGTGAATCA+TGG - Chr8:55077746-55077765 MsG0880045165.01.T01:CDS 35.0%
! TTGGGAGAGTTTAAAGTTTC+CGG - Chr8:55077622-55077641 MsG0880045165.01.T01:CDS 35.0%
!! CAACCTGAAGCATTGAAATT+CGG + Chr8:55077493-55077512 None:intergenic 35.0%
!! TCATGGTGGTGTGATTTTTA+AGG - Chr8:55077763-55077782 MsG0880045165.01.T01:CDS 35.0%
!!! GGATTTGTTATCATTTTCGC+AGG - Chr8:55077871-55077890 MsG0880045165.01.T01:CDS 35.0%
AACGGTCCTTGATCGATTAA+GGG + Chr8:55077350-55077369 None:intergenic 40.0%
AAGCGCGAAATCGCATAAAA+TGG - Chr8:55077673-55077692 MsG0880045165.01.T01:CDS 40.0%
ACCAAACCCTTAATCGATCA+AGG - Chr8:55077341-55077360 MsG0880045165.01.T01:CDS 40.0%
CAGGAATTTGTGAATCATGG+TGG - Chr8:55077749-55077768 MsG0880045165.01.T01:CDS 40.0%
CGATTTAATGTGCAAGAAGG+AGG - Chr8:55078162-55078181 MsG0880045165.01.T01:CDS 40.0%
GTCAAAACTTTCTCATACCC+CGG + Chr8:55078130-55078149 None:intergenic 40.0%
TCAACAATAAAAGCCTGAGG+TGG + Chr8:55077980-55077999 None:intergenic 40.0%
TCCTTGATCGATTAAGGGTT+TGG + Chr8:55077345-55077364 None:intergenic 40.0%
TTAATGTGCAAGAAGGAGGT+GGG - Chr8:55078166-55078185 MsG0880045165.01.T01:CDS 40.0%
TTTAATGTGCAAGAAGGAGG+TGG - Chr8:55078165-55078184 MsG0880045165.01.T01:CDS 40.0%
! AGGGTTTGGTTGAATCGATT+TGG + Chr8:55077331-55077350 None:intergenic 40.0%
! TGTTTCTGAGCTTAGGGTTA+GGG - Chr8:55077511-55077530 MsG0880045165.01.T01:CDS 40.0%
!! CGTCGATTTAATGTGCAAGA+AGG - Chr8:55078159-55078178 MsG0880045165.01.T01:CDS 40.0%
!! TCAGGTTGTTTCTGAGCTTA+GGG - Chr8:55077505-55077524 MsG0880045165.01.T01:CDS 40.0%
!! TTCAGGTTGTTTCTGAGCTT+AGG - Chr8:55077504-55077523 MsG0880045165.01.T01:CDS 40.0%
!! TTGATATTGCCAGTGGATTG+AGG - Chr8:55077996-55078015 MsG0880045165.01.T01:CDS 40.0%
!! TTGTTTCTGAGCTTAGGGTT+AGG - Chr8:55077510-55077529 MsG0880045165.01.T01:CDS 40.0%
!!! ATTTTCGCAGGTGTCGAATT+TGG - Chr8:55077883-55077902 MsG0880045165.01.T01:CDS 40.0%
AAAAAGGCGGCGAAACATTC+GGG - Chr8:55077546-55077565 MsG0880045165.01.T01:CDS 45.0%
AAGGAGGTGGGTGAAAATGT+GGG - Chr8:55078178-55078197 MsG0880045165.01.T01:CDS 45.0%
AATTCCGCGTGATGAAGCTA+GGG + Chr8:55077300-55077319 None:intergenic 45.0%
ACCTTCTCCTCAGAAACATC+CGG + Chr8:55077836-55077855 None:intergenic 45.0%
AGAGACTCTTTCTGATGGTC+AGG - Chr8:55077598-55077617 MsG0880045165.01.T01:CDS 45.0%
ATCATGTTCGTTGCGTGAAG+AGG - Chr8:55077801-55077820 MsG0880045165.01.T01:CDS 45.0%
CGTCGAGGATAACAGCATTA+GGG + Chr8:55077442-55077461 None:intergenic 45.0%
CGTGAAGAGGAAGTCTTTAC+CGG - Chr8:55077814-55077833 MsG0880045165.01.T01:CDS 45.0%
GAAAAAGGCGGCGAAACATT+CGG - Chr8:55077545-55077564 MsG0880045165.01.T01:CDS 45.0%
GAAAATGTGGGAAAGGGTCA+TGG - Chr8:55078190-55078209 MsG0880045165.01.T01:CDS 45.0%
GAACGGTCCTTGATCGATTA+AGG + Chr8:55077351-55077370 None:intergenic 45.0%
GTGGGTGAAAATGTGGGAAA+GGG - Chr8:55078184-55078203 MsG0880045165.01.T01:CDS 45.0%
TAATTCCGCGTGATGAAGCT+AGG + Chr8:55077301-55077320 None:intergenic 45.0%
TCCAGGGTATGCTAAAATGC+CGG - Chr8:55078108-55078127 MsG0880045165.01.T01:CDS 45.0%
TCTTTCTGATGGTCAGGCTT+GGG - Chr8:55077604-55077623 MsG0880045165.01.T01:CDS 45.0%
TGCATCCTCCACAAACTCTA+CGG - Chr8:55077374-55077393 MsG0880045165.01.T01:CDS 45.0%
TTAACCCTAGCTTCATCACG+CGG - Chr8:55077293-55077312 MsG0880045165.01.T01:CDS 45.0%
TTGTGGAGGATGCAATCGAA+CGG + Chr8:55077368-55077387 None:intergenic 45.0%
TTTGGCGAATAGGGATAGTG+TGG - Chr8:55077901-55077920 MsG0880045165.01.T01:CDS 45.0%
! GGTGTCGAATTTGGCGAATA+GGG - Chr8:55077892-55077911 MsG0880045165.01.T01:CDS 45.0%
! GTCTTTACCGGATGTTTCTG+AGG - Chr8:55077826-55077845 MsG0880045165.01.T01:CDS 45.0%
! TGGTGATGAGGGTAAAGTTG+AGG - Chr8:55078210-55078229 MsG0880045165.01.T01:CDS 45.0%
! TGTTTCTGAGGAGAAGGTGT+TGG - Chr8:55077838-55077857 MsG0880045165.01.T01:CDS 45.0%
!! AGGGTTGGGGTTGATGAAAA+AGG - Chr8:55077530-55077549 MsG0880045165.01.T01:CDS 45.0%
!! AGGTGTCGAATTTGGCGAAT+AGG - Chr8:55077891-55077910 MsG0880045165.01.T01:CDS 45.0%
!! GAAACCGCCTATTGTTTTGC+AGG - Chr8:55077730-55077749 MsG0880045165.01.T01:CDS 45.0%
!! GTTGGGGTTGATGAAAAAGG+CGG - Chr8:55077533-55077552 MsG0880045165.01.T01:CDS 45.0%
!! GTTTCTGAGGAGAAGGTGTT+GGG - Chr8:55077839-55077858 MsG0880045165.01.T01:CDS 45.0%
!!! ATGGCGCTTGTTTTTAGCCA+CGG - Chr8:55077692-55077711 MsG0880045165.01.T01:CDS 45.0%
AATCGTCGCCGTAGAGTTTG+TGG + Chr8:55077385-55077404 None:intergenic 50.0%
ACAAACTCTACGGCGACGAT+TGG - Chr8:55077384-55077403 MsG0880045165.01.T01:CDS 50.0%
ATGCGATTTCGCGCTTCCAT+CGG + Chr8:55077669-55077688 None:intergenic 50.0%
CAGGGTATGCTAAAATGCCG+GGG - Chr8:55078110-55078129 MsG0880045165.01.T01:CDS 50.0%
CCAGGGTATGCTAAAATGCC+GGG - Chr8:55078109-55078128 MsG0880045165.01.T01:CDS 50.0%
CTAGGGTTAAGAGTGAGTCG+CGG + Chr8:55077283-55077302 None:intergenic 50.0%
CTCTTTCTGATGGTCAGGCT+TGG - Chr8:55077603-55077622 MsG0880045165.01.T01:CDS 50.0%
CTGAGCTTAGGGTTAGGGTT+GGG - Chr8:55077516-55077535 MsG0880045165.01.T01:CDS 50.0%
GAAGGAGGTGGGTGAAAATG+TGG - Chr8:55078177-55078196 MsG0880045165.01.T01:CDS 50.0%
GCGTCGAGGATAACAGCATT+AGG + Chr8:55077443-55077462 None:intergenic 50.0%
GGTGGGTGAAAATGTGGGAA+AGG - Chr8:55078183-55078202 MsG0880045165.01.T01:CDS 50.0%
TACTACTGAGATGCCACCTC+AGG - Chr8:55077964-55077983 MsG0880045165.01.T01:CDS 50.0%
TCTGAGCTTAGGGTTAGGGT+TGG - Chr8:55077515-55077534 MsG0880045165.01.T01:CDS 50.0%
TGAAGACGCTCAATCGCTTC+CGG + Chr8:55077467-55077486 None:intergenic 50.0%
TGAGCTTAGGGTTAGGGTTG+GGG - Chr8:55077517-55077536 MsG0880045165.01.T01:CDS 50.0%
! ACCGGATGTTTCTGAGGAGA+AGG - Chr8:55077832-55077851 MsG0880045165.01.T01:CDS 50.0%
! GGAAAGGGTCATGGTGATGA+GGG - Chr8:55078199-55078218 MsG0880045165.01.T01:CDS 50.0%
!! GGAGAAGGTGTTGGGTGTTT+CGG - Chr8:55077847-55077866 MsG0880045165.01.T01:CDS 50.0%
!!! TGGCGCTTGTTTTTAGCCAC+GGG - Chr8:55077693-55077712 MsG0880045165.01.T01:CDS 50.0%
CATAGCACGCCTCAATCCAC+TGG + Chr8:55078008-55078027 None:intergenic 55.0%
TCAGCTTATTCAACGCCCCG+TGG + Chr8:55077712-55077731 None:intergenic 55.0%
! ACCAACGGCTTGGCTATCAC+CGG + Chr8:55077644-55077663 None:intergenic 55.0%
! GGGAAAGGGTCATGGTGATG+AGG - Chr8:55078198-55078217 MsG0880045165.01.T01:CDS 55.0%
!! CCCGGCATTTTAGCATACCC+TGG + Chr8:55078112-55078131 None:intergenic 55.0%
!! GAAGGTGTTGGGTGTTTCGG+AGG - Chr8:55077850-55077869 MsG0880045165.01.T01:CDS 55.0%
!!! GGCGCTTGTTTTTAGCCACG+GGG - Chr8:55077694-55077713 MsG0880045165.01.T01:CDS 55.0%
CGTCGCCGTAGAGTTTGTGG+AGG + Chr8:55077382-55077401 None:intergenic 60.0%
GGTGATAGCCAAGCCGTTGG+TGG - Chr8:55077643-55077662 MsG0880045165.01.T01:CDS 60.0%
TCCGGTGATAGCCAAGCCGT+TGG - Chr8:55077640-55077659 MsG0880045165.01.T01:CDS 60.0%
TGCTGTTATCCTCGACGCGC+CGG - Chr8:55077445-55077464 MsG0880045165.01.T01:CDS 60.0%
GCGCTTCCATCGGCCACCAA+CGG + Chr8:55077659-55077678 None:intergenic 65.0%
TCCATCGGCCACCAACGGCT+TGG + Chr8:55077654-55077673 None:intergenic 65.0%
CAATCGCTTCCGGCGCGTCG+AGG + Chr8:55077457-55077476 None:intergenic 70.0%
!! GCCAAGCCGTTGGTGGCCGA+TGG - Chr8:55077650-55077669 MsG0880045165.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 55077215 55078336 55077215 ID=MsG0880045165.01;Name=MsG0880045165.01
Chr8 mRNA 55077215 55078336 55077215 ID=MsG0880045165.01.T01;Parent=MsG0880045165.01;Name=MsG0880045165.01.T01;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|373
Chr8 exon 55077215 55078336 55077215 ID=MsG0880045165.01.T01:exon:23806;Parent=MsG0880045165.01.T01
Chr8 CDS 55077215 55078336 55077215 ID=MsG0880045165.01.T01:cds;Parent=MsG0880045165.01.T01
Gene Sequence

>MsG0880045165.01.T01

ATGGCTGAAAAGAAACACGGTGTAATAGGTTACGCATTAGCACCAAAGAAACAAAACAGTTTCATCCGCGACTCACTCTTAACCCTAGCTTCATCACGCGGAATTAAACTCATCCAAATCGATTCAACCAAACCCTTAATCGATCAAGGACCGTTCGATTGCATCCTCCACAAACTCTACGGCGACGATTGGAAACGCCAGCTTCAACAATTTCAAATTCGAAACCCTAATGCTGTTATCCTCGACGCGCCGGAAGCGATTGAGCGTCTTCATAACCGAATTTCAATGCTTCAGGTTGTTTCTGAGCTTAGGGTTAGGGTTGGGGTTGATGAAAAAGGCGGCGAAACATTCGGGATCCCGAAACAGATCGTGATTTATGATAAAGAGACTCTTTCTGATGGTCAGGCTTGGGAGAGTTTAAAGTTTCCGGTGATAGCCAAGCCGTTGGTGGCCGATGGAAGCGCGAAATCGCATAAAATGGCGCTTGTTTTTAGCCACGGGGCGTTGAATAAGCTGAAACCGCCTATTGTTTTGCAGGAATTTGTGAATCATGGTGGTGTGATTTTTAAGGTGTATGTTGTTGGGAATCATGTTCGTTGCGTGAAGAGGAAGTCTTTACCGGATGTTTCTGAGGAGAAGGTGTTGGGTGTTTCGGAGGATTTGTTATCATTTTCGCAGGTGTCGAATTTGGCGAATAGGGATAGTGTGGATGATGATGAAAAGTTTTATAAGATGATGAGTTTGGATGATACTACTGAGATGCCACCTCAGGCTTTTATTGTTGATATTGCCAGTGGATTGAGGCGTGCTATGAAGCTGAATTTGTTTAATTTTGATGTGATTCGTGATTCTAGATATGGTAATCGGTATCTTATTATTGATATTAATTACTTTCCAGGGTATGCTAAAATGCCGGGGTATGAGAAAGTTTTGACAGAATTTTTCGTCGATTTAATGTGCAAGAAGGAGGTGGGTGAAAATGTGGGAAAGGGTCATGGTGATGAGGGTAAAGTTGAGGTTTTGATTGCAGAAAAAGATAAATCTGTTAAGGTTTTGACTGAAGAAAAAGATAAATCTGTTAAGGTTTTGACTGAAGAAAAAGATAAATCTGTTAAGGTTTGA

Protein sequence

>MsG0880045165.01.T01

MAEKKHGVIGYALAPKKQNSFIRDSLLTLASSRGIKLIQIDSTKPLIDQGPFDCILHKLYGDDWKRQLQQFQIRNPNAVILDAPEAIERLHNRISMLQVVSELRVRVGVDEKGGETFGIPKQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHGALNKLKPPIVLQEFVNHGGVIFKVYVVGNHVRCVKRKSLPDVSEEKVLGVSEDLLSFSQVSNLANRDSVDDDEKFYKMMSLDDTTEMPPQAFIVDIASGLRRAMKLNLFNFDVIRDSRYGNRYLIIDINYFPGYAKMPGYEKVLTEFFVDLMCKKEVGENVGKGHGDEGKVEVLIAEKDKSVKVLTEEKDKSVKVLTEEKDKSVKV*