AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043586.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043586.01.T01 MTR_5g076640 93.333 450 30 0 1 450 1 450 0.0 857
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043586.01.T01 AT5G17240 58.503 441 172 5 1 439 1 432 0.0 529
MsG0880043586.01.T01 AT5G17240 59.290 366 142 4 76 439 1 361 2.05e-156 450

Find 102 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGTCATTAAAGCAGATTT+TGG 0.219025 8:+27328712 None:intergenic
CTCTTCTCTCTCCTCTGTTC+AGG 0.231576 8:-27328638 MsG0880043586.01.T01:intron
CAACACTCTCTTTCCTCTCT+TGG 0.235733 8:-27329001 MsG0880043586.01.T01:CDS
TAATTGTTGTAATGCAAATA+AGG 0.241006 8:-27324678 MsG0880043586.01.T01:three_prime_UTR
GTCGGACGTCTTGCATATTC+TGG 0.242969 8:-27325082 MsG0880043586.01.T01:CDS
TTGTTAAACTTATGTCATTC+AGG 0.257944 8:-27324904 MsG0880043586.01.T01:CDS
AACATTTAAGGCATGGCTTT+GGG 0.315162 8:-27326550 MsG0880043586.01.T01:CDS
CTCTTATTGCAATGTAATAC+TGG 0.321869 8:-27324727 MsG0880043586.01.T01:three_prime_UTR
CACTTCTACTTCATGGTCTA+AGG 0.325752 8:-27325197 MsG0880043586.01.T01:CDS
GATTTACTGGAGAGTGAAAT+AGG 0.337775 8:-27324629 MsG0880043586.01.T01:three_prime_UTR
GGGCAACCCCTCATAATAAA+AGG 0.358661 8:-27325111 MsG0880043586.01.T01:CDS
TTGTAAGGGATATGATTTAC+TGG 0.358933 8:-27324642 MsG0880043586.01.T01:three_prime_UTR
CTATGTACACTTCTACTTCA+TGG 0.363522 8:-27325204 MsG0880043586.01.T01:CDS
GACTACACTCCAATGCATTC+AGG 0.375734 8:+27324951 None:intergenic
TAACATTTAAGGCATGGCTT+TGG 0.385694 8:-27326551 MsG0880043586.01.T01:CDS
AATAAGAGATACAATCAATA+AGG 0.390425 8:+27324742 None:intergenic
TAATTAAACAAGTCACCAAC+AGG 0.396024 8:+27325811 None:intergenic
GAAAGAAGCTCATGCCTTGA+TGG 0.398662 8:-27326601 MsG0880043586.01.T01:CDS
AGTCATAACTTTGCGGCAAA+TGG 0.404610 8:+27326849 None:intergenic
GCACCTGGAGAGGACCTATC+TGG 0.423204 8:-27325784 MsG0880043586.01.T01:CDS
ATGAAATCATCGTTATGAAA+TGG 0.434118 8:-27325039 MsG0880043586.01.T01:CDS
AGAATGTTGCAGTAGAGGTT+TGG 0.444175 8:-27328779 MsG0880043586.01.T01:intron
CAATCAAATGGAGACAAGAA+TGG 0.446355 8:-27325739 MsG0880043586.01.T01:CDS
GAATGTTGCAGTAGAGGTTT+GGG 0.448690 8:-27328778 MsG0880043586.01.T01:intron
CTTGTTATACGAAGTTGGTA+AGG 0.457725 8:-27326903 MsG0880043586.01.T01:CDS
GTTTGCTTGTTATACGAAGT+TGG 0.462021 8:-27326908 MsG0880043586.01.T01:CDS
AGGAAAGAGAGTGTTGAGAA+TGG 0.462418 8:+27329008 None:intergenic
TATGACTTGCTAGCCATGTT+TGG 0.465171 8:-27326833 MsG0880043586.01.T01:CDS
ATGGCTTTGGGCTGCTGCAA+CGG 0.467154 8:-27326538 MsG0880043586.01.T01:intron
CTACCTTTCCTCACTCTGGC+GGG 0.467292 8:-27328961 MsG0880043586.01.T01:intron
GTGCTGTGAGAGGTCTTAAG+AGG 0.471039 8:-27328756 MsG0880043586.01.T01:CDS
CACCAGGTTCTATTATGCTA+TGG 0.472726 8:-27325316 MsG0880043586.01.T01:intron
CTCCAATGCATTCAGGAGTA+AGG 0.484839 8:+27324958 None:intergenic
CTATGAAACGAGAAGGTCAA+TGG 0.485138 8:-27324811 MsG0880043586.01.T01:CDS
TGTTAAACTTATGTCATTCA+GGG 0.485910 8:-27324903 MsG0880043586.01.T01:CDS
TAGCCGTCTCATGGAGGCTC+AGG 0.491464 8:-27324776 MsG0880043586.01.T01:three_prime_UTR
TGCGGCAAATGGACGAGGTA+AGG 0.498856 8:+27326860 None:intergenic
GCTAGGACAAATTACAAGAA+AGG 0.501930 8:-27325628 MsG0880043586.01.T01:CDS
AAATTACAAGAAAGGCGATC+AGG 0.502432 8:-27325620 MsG0880043586.01.T01:intron
AAACATCAGTTCTTCCATCA+AGG 0.504879 8:+27326587 None:intergenic
AGCTATGTCTTGCTGTGAAT+AGG 0.511400 8:-27328663 MsG0880043586.01.T01:CDS
TTGGTAAGGGAAAGACTTCA+AGG 0.512774 8:-27326889 MsG0880043586.01.T01:CDS
GTTTCTACCTTTCCTCACTC+TGG 0.514945 8:-27328965 MsG0880043586.01.T01:CDS
TACATTATGAGCTTCTAAGA+AGG 0.520589 8:+27324868 None:intergenic
AAGAGAGTGTTGAGAATGGT+CGG 0.528406 8:+27329012 None:intergenic
GGTGGAAATTAGCCGTCTCA+TGG 0.531296 8:-27324785 MsG0880043586.01.T01:exon
GTACGAGTTCTGAAAGAGCT+AGG 0.531868 8:-27329124 MsG0880043586.01.T01:five_prime_UTR
GCTCAGATTACTGTTGTACA+AGG 0.535587 8:+27324598 None:intergenic
GAAAGAGCTAGGTTAGAAGA+TGG 0.535954 8:-27329113 MsG0880043586.01.T01:exon
GCTGGTTGTTTATGCCCTGT+TGG 0.537691 8:-27325826 MsG0880043586.01.T01:CDS
AACTTTGCGGCAAATGGACG+AGG 0.537904 8:+27326855 None:intergenic
GCTAGCAAGTCATAACTTTG+CGG 0.538816 8:+27326842 None:intergenic
AAGAACATGGAAGGTTTGAA+AGG 0.542145 8:-27329087 MsG0880043586.01.T01:CDS
TACTAGCTGCGTTACGACTG+TGG 0.542432 8:-27325132 MsG0880043586.01.T01:CDS
TTTCTCAAATTCACCAAACA+TGG 0.542605 8:+27326820 None:intergenic
AGAGGTTTGGGTGCTGTGAG+AGG 0.544339 8:-27328766 MsG0880043586.01.T01:CDS
TACCTTACTCCTGAATGCAT+TGG 0.549106 8:-27324960 MsG0880043586.01.T01:CDS
GAAGTAGAAGTGTACATAGC+AGG 0.549201 8:+27325208 None:intergenic
AAGAACTGATGTTTAAGCCT+CGG 0.551132 8:-27326578 MsG0880043586.01.T01:CDS
CTCAGAGACTAACTGATGGT+GGG 0.556902 8:-27325684 MsG0880043586.01.T01:CDS
TTGTTTAATTACGATGCACC+TGG 0.559289 8:-27325799 MsG0880043586.01.T01:CDS
ATACCAGATAGGTCCTCTCC+AGG 0.561435 8:+27325781 None:intergenic
AAACGAGAAGGTCAATGGAT+AGG 0.563947 8:-27324806 MsG0880043586.01.T01:CDS
ATCAGGTGGATGAAGCTATG+TGG 0.568564 8:-27326662 MsG0880043586.01.T01:intron
TTTGAGCTTCTTGAACACTA+CGG 0.569876 8:-27325280 MsG0880043586.01.T01:CDS
GTGTACATAGCAGGTTCCAA+AGG 0.569923 8:+27325217 None:intergenic
TGCTGTGAGAGGTCTTAAGA+GGG 0.570530 8:-27328755 MsG0880043586.01.T01:CDS
TCTACCTTTCCTCACTCTGG+CGG 0.572108 8:-27328962 MsG0880043586.01.T01:CDS
CTCGGACATTGCATATACCA+TGG 0.573706 8:-27325855 MsG0880043586.01.T01:CDS
CTACGTCGTCAATACCAGAT+AGG 0.574667 8:+27325770 None:intergenic
TTGTTATACGAAGTTGGTAA+GGG 0.583923 8:-27326902 MsG0880043586.01.T01:CDS
TCAGGTGGATGAAGCTATGT+GGG 0.588137 8:-27326661 MsG0880043586.01.T01:intron
TCGGACATTGCATATACCAT+GGG 0.588653 8:-27325854 MsG0880043586.01.T01:CDS
GGTTTGAAAGGTTCTTAACA+TGG 0.589973 8:-27329075 MsG0880043586.01.T01:CDS
TTGTTGAATCTGATATTCCA+AGG 0.592444 8:+27329044 None:intergenic
TCTCAGAGACTAACTGATGG+TGG 0.592968 8:-27325685 MsG0880043586.01.T01:CDS
GCCAGTTACCCGCCAGAGTG+AGG 0.593667 8:+27328953 None:intergenic
GTATCGTCTTCAATAGATGT+TGG 0.593968 8:+27324980 None:intergenic
TAGAAGATGGAACAAGAACA+TGG 0.594815 8:-27329100 MsG0880043586.01.T01:exon
TAATTACGATGCACCTGGAG+AGG 0.595408 8:-27325794 MsG0880043586.01.T01:CDS
TGTACATAGCAGGTTCCAAA+GGG 0.596868 8:+27325218 None:intergenic
TAACAGAGACTGAACTTGCA+GGG 0.598802 8:+27326793 None:intergenic
CATTCTCAGAGACTAACTGA+TGG 0.601638 8:-27325688 MsG0880043586.01.T01:CDS
CATATACCATGGGATGAAGC+TGG 0.602506 8:-27325844 MsG0880043586.01.T01:CDS
AGATGGAACAAGAACATGGA+AGG 0.604086 8:-27329096 MsG0880043586.01.T01:CDS
CATAATAAAAGGAGGTCTGT+CGG 0.606789 8:-27325100 MsG0880043586.01.T01:CDS
AAATGGAGACAAGAATGGAA+TGG 0.608545 8:-27325734 MsG0880043586.01.T01:CDS
CGAGAAGGTCAATGGATAGG+TGG 0.613437 8:-27324803 MsG0880043586.01.T01:CDS
ATACCTGAGCCTCCATGAGA+CGG 0.619857 8:+27324773 None:intergenic
ATTTCATCTATGAAACGAGA+AGG 0.625219 8:-27324818 MsG0880043586.01.T01:CDS
GCAGAGAGAATGACCAAGAG+AGG 0.631070 8:+27328988 None:intergenic
AAACAACCAGCTTCATCCCA+TGG 0.633574 8:+27325838 None:intergenic
ACTAGCTGCGTTACGACTGT+GGG 0.639311 8:-27325131 MsG0880043586.01.T01:CDS
TTAACATGGACATCACACCT+TGG 0.645130 8:-27329061 MsG0880043586.01.T01:CDS
TCACTCTATATCCATCCCAA+CGG 0.653728 8:-27325172 MsG0880043586.01.T01:CDS
TTACCCGCCAGAGTGAGGAA+AGG 0.662573 8:+27328958 None:intergenic
CAACCCCTCATAATAAAAGG+AGG 0.668522 8:-27325108 MsG0880043586.01.T01:CDS
GCAGCTAGTAGCGCAAACGA+AGG 0.670133 8:+27325145 None:intergenic
GGAAATTAGCCGTCTCATGG+AGG 0.680251 8:-27324782 MsG0880043586.01.T01:exon
GCTGTGAGAGGTCTTAAGAG+GGG 0.708748 8:-27328754 MsG0880043586.01.T01:CDS
AATTAAACAAGTCACCAACA+GGG 0.716642 8:+27325812 None:intergenic
GTAAGGGAAAGACTTCAAGG+TGG 0.809146 8:-27326886 MsG0880043586.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATACAAAAAACTAT+TGG + Chr8:27325358-27325377 None:intergenic 10.0%
!! ATTTATGATAAAATTTATTC+AGG + Chr8:27328121-27328140 None:intergenic 10.0%
!! TTTATGATAAAATTTATTCA+GGG + Chr8:27328120-27328139 None:intergenic 10.0%
!! AAACCAAAACAAAAATAAAA+GGG + Chr8:27327147-27327166 None:intergenic 15.0%
!! ATTTAATTCTTGAAATTGTA+AGG - Chr8:27325370-27325389 MsG0880043586.01.T01:intron 15.0%
!! CAATAATTCTAACAAAAAAT+TGG + Chr8:27326581-27326600 None:intergenic 15.0%
!! CGAATTAGAAAATATTTATA+CGG + Chr8:27328231-27328250 None:intergenic 15.0%
!! TAAACCAAAACAAAAATAAA+AGG + Chr8:27327148-27327167 None:intergenic 15.0%
!!! ATTTTTTAGTTTATCTCATT+AGG - Chr8:27326876-27326895 MsG0880043586.01.T01:CDS 15.0%
!! AAGCATAAAGTAAAAACTAA+CGG + Chr8:27326682-27326701 None:intergenic 20.0%
!! AATAAGAGATACAATCAATA+AGG + Chr8:27328905-27328924 None:intergenic 20.0%
!! AATTGAATATGTAAACCTAA+TGG + Chr8:27328081-27328100 None:intergenic 20.0%
!! ATTCTAACAAAAAATTGGAT+TGG + Chr8:27326576-27326595 None:intergenic 20.0%
!! TAATTGTTGTAATGCAAATA+AGG - Chr8:27328966-27328985 MsG0880043586.01.T01:CDS 20.0%
!! TGATGTATGATTTCAATTTA+GGG - Chr8:27325520-27325539 MsG0880043586.01.T01:intron 20.0%
!!! AGTGTTTAGATTTTAAATGA+TGG - Chr8:27329124-27329143 MsG0880043586.01.T01:five_prime_UTR 20.0%
!!! GAAATTTTAACATAACCATT+AGG - Chr8:27328063-27328082 MsG0880043586.01.T01:intron 20.0%
!!! GTAGATAATTTTCAATCAAA+TGG - Chr8:27327893-27327912 MsG0880043586.01.T01:intron 20.0%
!!! GTGTTTAGATTTTAAATGAT+GGG - Chr8:27329125-27329144 MsG0880043586.01.T01:five_prime_UTR 20.0%
!!! GTTTTTCCTTATTTTTGTAA+GGG - Chr8:27328988-27329007 MsG0880043586.01.T01:CDS 20.0%
!!! TAAGTTATTTCTATAGCAAA+AGG + Chr8:27326431-27326450 None:intergenic 20.0%
!!! TAATTTTAATTACCTTCCAT+TGG - Chr8:27326542-27326561 MsG0880043586.01.T01:CDS 20.0%
!!! TATCCTCTATTTTATGTTAT+CGG - Chr8:27327483-27327502 MsG0880043586.01.T01:intron 20.0%
! AACAAATTGAGGACTATAAA+AGG + Chr8:27325752-27325771 None:intergenic 25.0%
! AATAACTCATCTTTATGTTG+TGG - Chr8:27326957-27326976 MsG0880043586.01.T01:intron 25.0%
! AATGTTGTAACAGACTTATT+GGG - Chr8:27327577-27327596 MsG0880043586.01.T01:intron 25.0%
! ACTAAATTAACCGATCTAAA+GGG + Chr8:27325472-27325491 None:intergenic 25.0%
! ATCTGCAATATAAAAAAGCT+CGG + Chr8:27326709-27326728 None:intergenic 25.0%
! ATGAAATCATCGTTATGAAA+TGG - Chr8:27328605-27328624 MsG0880043586.01.T01:intron 25.0%
! ATTGAAATCATACATCACAT+TGG + Chr8:27325517-27325536 None:intergenic 25.0%
! CATTAGGTTAGATTATATCT+TGG - Chr8:27326892-27326911 MsG0880043586.01.T01:CDS 25.0%
! CCAAAACAATACAACAAAAA+TGG + Chr8:27324845-27324864 None:intergenic 25.0%
! CTACATTATAATGTTGTCAA+CGG + Chr8:27327357-27327376 None:intergenic 25.0%
! GGAAGGTAATTAAAATTAAG+AGG + Chr8:27326540-27326559 None:intergenic 25.0%
! GTGATGTATGATTTCAATTT+AGG - Chr8:27325519-27325538 MsG0880043586.01.T01:intron 25.0%
! TACAAAAAGCTAAATCAGAA+TGG - Chr8:27327021-27327040 MsG0880043586.01.T01:intron 25.0%
! TCATATCCCTTACAAAAATA+AGG + Chr8:27328997-27329016 None:intergenic 25.0%
! TGTTAAACTTATGTCATTCA+GGG - Chr8:27328741-27328760 MsG0880043586.01.T01:CDS 25.0%
! TGTTAGAATTATTGTATGCA+TGG - Chr8:27326587-27326606 MsG0880043586.01.T01:CDS 25.0%
! TTGTAATTTCATTAACAGCA+GGG + Chr8:27325411-27325430 None:intergenic 25.0%
! TTGTTAAACTTATGTCATTC+AGG - Chr8:27328740-27328759 MsG0880043586.01.T01:CDS 25.0%
! TTTACTCATGACAAGTAAAA+TGG + Chr8:27327707-27327726 None:intergenic 25.0%
! TTTGTAATTTCATTAACAGC+AGG + Chr8:27325412-27325431 None:intergenic 25.0%
!! TTTAAGTCTTAGAGTATTCT+TGG + Chr8:27325672-27325691 None:intergenic 25.0%
!!! AAACTTTGCATTTGTTTTCT+TGG - Chr8:27324754-27324773 MsG0880043586.01.T01:three_prime_UTR 25.0%
!!! AACTTTGCATTTGTTTTCTT+GGG - Chr8:27324755-27324774 MsG0880043586.01.T01:three_prime_UTR 25.0%
!!! ATTGATTCATTTTGTGTTCT+TGG - Chr8:27327670-27327689 MsG0880043586.01.T01:intron 25.0%
!!! CCATTTTTGTTGTATTGTTT+TGG - Chr8:27324842-27324861 MsG0880043586.01.T01:CDS 25.0%
!!! GGTTTTTCCTTATTTTTGTA+AGG - Chr8:27328987-27329006 MsG0880043586.01.T01:CDS 25.0%
!!! TGTTCTGTTCATGTTTTTTT+AGG - Chr8:27325062-27325081 MsG0880043586.01.T01:CDS 25.0%
AACTTAACATGCTTGACATT+TGG + Chr8:27326140-27326159 None:intergenic 30.0%
AATTAAACAAGTCACCAACA+GGG + Chr8:27327835-27327854 None:intergenic 30.0%
ACATGAACAGAACAAAAACT+TGG + Chr8:27325056-27325075 None:intergenic 30.0%
ATAAGTGCTCATCATGATAA+GGG - Chr8:27326454-27326473 MsG0880043586.01.T01:intron 30.0%
ATCTTTATGTTGTGGTTATC+AGG - Chr8:27326965-27326984 MsG0880043586.01.T01:intron 30.0%
ATGTTGTAACAGACTTATTG+GGG - Chr8:27327578-27327597 MsG0880043586.01.T01:intron 30.0%
ATTTCATCTATGAAACGAGA+AGG - Chr8:27328826-27328845 MsG0880043586.01.T01:intron 30.0%
CAAGCAAAAGATTTCAAGAA+TGG + Chr8:27327538-27327557 None:intergenic 30.0%
CAATGTTGTAACAGACTTAT+TGG - Chr8:27327576-27327595 MsG0880043586.01.T01:intron 30.0%
CATTTGATCCATGAAATAGT+AGG - Chr8:27325106-27325125 MsG0880043586.01.T01:CDS 30.0%
CCAAAACAAAAATAAAAGGG+AGG + Chr8:27327144-27327163 None:intergenic 30.0%
CGACATTGCAAAATGTTAAT+CGG - Chr8:27325177-27325196 MsG0880043586.01.T01:CDS 30.0%
CTCTTATTGCAATGTAATAC+TGG - Chr8:27328917-27328936 MsG0880043586.01.T01:intron 30.0%
GACTAAATTAACCGATCTAA+AGG + Chr8:27325473-27325492 None:intergenic 30.0%
GATACATTCCTACTATTTCA+TGG + Chr8:27325117-27325136 None:intergenic 30.0%
GTAGACTACAAACTATTACA+GGG - Chr8:27328189-27328208 MsG0880043586.01.T01:intron 30.0%
GTAGCGAAATTTGAACAAAT+CGG - Chr8:27327373-27327392 MsG0880043586.01.T01:intron 30.0%
TAATTAAACAAGTCACCAAC+AGG + Chr8:27327836-27327855 None:intergenic 30.0%
TCAAAAACCAGATATCTTCT+CGG - Chr8:27327771-27327790 MsG0880043586.01.T01:intron 30.0%
TGTAGACTACAAACTATTAC+AGG - Chr8:27328188-27328207 MsG0880043586.01.T01:intron 30.0%
TTCTTGGGTGATTAATCAAA+GGG - Chr8:27324770-27324789 MsG0880043586.01.T01:three_prime_UTR 30.0%
TTGTAAGGGATATGATTTAC+TGG - Chr8:27329002-27329021 MsG0880043586.01.T01:CDS 30.0%
TTGTTGAATCTGATATTCCA+AGG + Chr8:27324603-27324622 None:intergenic 30.0%
TTTATGAACTGGACTGATAT+GGG + Chr8:27326190-27326209 None:intergenic 30.0%
TTTCTCAAATTCACCAAACA+TGG + Chr8:27326827-27326846 None:intergenic 30.0%
TTTCTTGGGTGATTAATCAA+AGG - Chr8:27324769-27324788 MsG0880043586.01.T01:three_prime_UTR 30.0%
! CTAGTCATTAAAGCAGATTT+TGG + Chr8:27324935-27324954 None:intergenic 30.0%
! GGGATGAAAATTTTGTCATT+TGG + Chr8:27328409-27328428 None:intergenic 30.0%
! TACATTATGAGCTTCTAAGA+AGG + Chr8:27328779-27328798 None:intergenic 30.0%
! TGACAAAATTTTCATCCCTT+TGG - Chr8:27328411-27328430 MsG0880043586.01.T01:intron 30.0%
!! ATGCATATTGCTTTTATGCT+AGG - Chr8:27327999-27328018 MsG0880043586.01.T01:intron 30.0%
!! GGTTTTTAACATTTAAGGCA+TGG - Chr8:27327087-27327106 MsG0880043586.01.T01:intron 30.0%
!! TTGTTATACGAAGTTGGTAA+GGG - Chr8:27326742-27326761 MsG0880043586.01.T01:intron 30.0%
!!! CCTCCCTTTTATTTTTGTTT+TGG - Chr8:27327141-27327160 MsG0880043586.01.T01:intron 30.0%
AAACATCAGTTCTTCCATCA+AGG + Chr8:27327060-27327079 None:intergenic 35.0%
AAATGGAGACAAGAATGGAA+TGG - Chr8:27327910-27327929 MsG0880043586.01.T01:intron 35.0%
AAATTACAAGAAAGGCGATC+AGG - Chr8:27328024-27328043 MsG0880043586.01.T01:intron 35.0%
AAGAACATGGAAGGTTTGAA+AGG - Chr8:27324557-27324576 MsG0880043586.01.T01:three_prime_UTR 35.0%
AAGAACTGATGTTTAAGCCT+CGG - Chr8:27327066-27327085 MsG0880043586.01.T01:intron 35.0%
AAGAAGAAAAACCTGAACAG+AGG + Chr8:27325020-27325039 None:intergenic 35.0%
AATAAGTTGTGTGTCCAAAC+AGG - Chr8:27326495-27326514 MsG0880043586.01.T01:intron 35.0%
AATAGAACCTGGTGAAAACA+AGG + Chr8:27328322-27328341 None:intergenic 35.0%
ACCTAATTAACAGGTGCTAA+TGG - Chr8:27325326-27325345 MsG0880043586.01.T01:intron 35.0%
ATCTTCATTCCACTGTTTAG+TGG - Chr8:27328278-27328297 MsG0880043586.01.T01:intron 35.0%
CAATCAAATGGAGACAAGAA+TGG - Chr8:27327905-27327924 MsG0880043586.01.T01:intron 35.0%
CATAAGTGCTCATCATGATA+AGG - Chr8:27326453-27326472 MsG0880043586.01.T01:intron 35.0%
CATAATAAAAGGAGGTCTGT+CGG - Chr8:27328544-27328563 MsG0880043586.01.T01:intron 35.0%
CATTATAATGTTGTCAACGG+CGG + Chr8:27327354-27327373 None:intergenic 35.0%
CTATGTACACTTCTACTTCA+TGG - Chr8:27328440-27328459 MsG0880043586.01.T01:intron 35.0%
GATTTACTGGAGAGTGAAAT+AGG - Chr8:27329015-27329034 MsG0880043586.01.T01:CDS 35.0%
GCCTTAAATGTTAAAAACCG+AGG + Chr8:27327086-27327105 None:intergenic 35.0%
GCTAGGACAAATTACAAGAA+AGG - Chr8:27328016-27328035 MsG0880043586.01.T01:intron 35.0%
GGTTTGAAAGGTTCTTAACA+TGG - Chr8:27324569-27324588 MsG0880043586.01.T01:three_prime_UTR 35.0%
GTATCGTCTTCAATAGATGT+TGG + Chr8:27328667-27328686 None:intergenic 35.0%
GTTTATGAACTGGACTGATA+TGG + Chr8:27326191-27326210 None:intergenic 35.0%
TAGAAGATGGAACAAGAACA+TGG - Chr8:27324544-27324563 MsG0880043586.01.T01:three_prime_UTR 35.0%
TAGGAGGAGCTTTCAATTTA+GGG - Chr8:27325589-27325608 MsG0880043586.01.T01:intron 35.0%
TCCATTAGCACCTGTTAATT+AGG + Chr8:27325330-27325349 None:intergenic 35.0%
TCGCCGATAACATAAAATAG+AGG + Chr8:27327489-27327508 None:intergenic 35.0%
TGATGAAACCAAATCCTAAC+AGG + Chr8:27326635-27326654 None:intergenic 35.0%
TGTGCAATGTTAGAGACTAA+TGG - Chr8:27326224-27326243 MsG0880043586.01.T01:intron 35.0%
TTAACATGCTTGACATTTGG+TGG + Chr8:27326137-27326156 None:intergenic 35.0%
TTAGAGACTAATGGTCTGTT+TGG - Chr8:27326233-27326252 MsG0880043586.01.T01:intron 35.0%
TTCCATAGCATAATAGAACC+TGG + Chr8:27328333-27328352 None:intergenic 35.0%
TTGGTTCAATAACCAATGGA+AGG + Chr8:27326557-27326576 None:intergenic 35.0%
TTGTTTAATTACGATGCACC+TGG - Chr8:27327845-27327864 MsG0880043586.01.T01:intron 35.0%
TTTATGTTGTGGTTATCAGG+TGG - Chr8:27326968-27326987 MsG0880043586.01.T01:intron 35.0%
TTTGAGCTTCTTGAACACTA+CGG - Chr8:27328364-27328383 MsG0880043586.01.T01:intron 35.0%
! AAATCTTTTGCTTGCCTTTC+TGG - Chr8:27327544-27327563 MsG0880043586.01.T01:intron 35.0%
! AACATTTAAGGCATGGCTTT+GGG - Chr8:27327094-27327113 MsG0880043586.01.T01:intron 35.0%
! ACAGACCTCCTTTTATTATG+AGG + Chr8:27328544-27328563 None:intergenic 35.0%
! AGACCTCCTTTTATTATGAG+GGG + Chr8:27328542-27328561 None:intergenic 35.0%
! ATAAGTGTTGTGAGACTGTT+TGG - Chr8:27326284-27326303 MsG0880043586.01.T01:intron 35.0%
! ATTCCACTGTTTAGTGGATA+AGG - Chr8:27328284-27328303 MsG0880043586.01.T01:intron 35.0%
! CAGACCTCCTTTTATTATGA+GGG + Chr8:27328543-27328562 None:intergenic 35.0%
! GCCTCGGTTTTTAACATTTA+AGG - Chr8:27327082-27327101 MsG0880043586.01.T01:intron 35.0%
! TAACATTTAAGGCATGGCTT+TGG - Chr8:27327093-27327112 MsG0880043586.01.T01:intron 35.0%
! TAAGTGTTGTGAGACTGTTT+GGG - Chr8:27326285-27326304 MsG0880043586.01.T01:intron 35.0%
! TGCAATGACGTTTTATATGG+TGG - Chr8:27327316-27327335 MsG0880043586.01.T01:intron 35.0%
!! CCTCAATTTGTTGACTTGAT+GGG - Chr8:27325760-27325779 MsG0880043586.01.T01:CDS 35.0%
!! CTTGTTATACGAAGTTGGTA+AGG - Chr8:27326741-27326760 MsG0880043586.01.T01:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + Chr8:27326375-27326394 None:intergenic 35.0%
!! GTTTGCTTGTTATACGAAGT+TGG - Chr8:27326736-27326755 MsG0880043586.01.T01:intron 35.0%
!! TCCTCAATTTGTTGACTTGA+TGG - Chr8:27325759-27325778 MsG0880043586.01.T01:CDS 35.0%
!! TGGATTGGTTCAATAACCAA+TGG + Chr8:27326561-27326580 None:intergenic 35.0%
AAACGAGAAGGTCAATGGAT+AGG - Chr8:27328838-27328857 MsG0880043586.01.T01:intron 40.0%
AACAGAGTCTGATCAAGAGA+CGG - Chr8:27325303-27325322 MsG0880043586.01.T01:CDS 40.0%
AAGAGACGGACCTAATTAAC+AGG - Chr8:27325317-27325336 MsG0880043586.01.T01:intron 40.0%
ACAAATGTCTACGCCTTAAC+AGG + Chr8:27326081-27326100 None:intergenic 40.0%
ACATCACATTGGACTCATGA+AGG + Chr8:27325506-27325525 None:intergenic 40.0%
AGAATGTTGCAGTAGAGGTT+TGG - Chr8:27324865-27324884 MsG0880043586.01.T01:CDS 40.0%
AGATGGAACAAGAACATGGA+AGG - Chr8:27324548-27324567 MsG0880043586.01.T01:three_prime_UTR 40.0%
AGTCATAACTTTGCGGCAAA+TGG + Chr8:27326798-27326817 None:intergenic 40.0%
ATCAGGTAGTGCACAATTCT+TGG - Chr8:27328041-27328060 MsG0880043586.01.T01:intron 40.0%
ATGCCTTATCCACTAAACAG+TGG + Chr8:27328290-27328309 None:intergenic 40.0%
CAACCCCTCATAATAAAAGG+AGG - Chr8:27328536-27328555 MsG0880043586.01.T01:intron 40.0%
CACCAGGTTCTATTATGCTA+TGG - Chr8:27328328-27328347 MsG0880043586.01.T01:intron 40.0%
CACTTCTACTTCATGGTCTA+AGG - Chr8:27328447-27328466 MsG0880043586.01.T01:intron 40.0%
CATTCTCAGAGACTAACTGA+TGG - Chr8:27327956-27327975 MsG0880043586.01.T01:intron 40.0%
CATTGATCCAAGTACCAGAA+AGG + Chr8:27327561-27327580 None:intergenic 40.0%
CCCATCAAGTCAACAAATTG+AGG + Chr8:27325763-27325782 None:intergenic 40.0%
CTAAATTGAAAGCTCCTCCT+AGG + Chr8:27325590-27325609 None:intergenic 40.0%
CTAGGAGGAGCTTTCAATTT+AGG - Chr8:27325588-27325607 MsG0880043586.01.T01:intron 40.0%
CTATGAAACGAGAAGGTCAA+TGG - Chr8:27328833-27328852 MsG0880043586.01.T01:intron 40.0%
CTGTGCAAATCAGCTTATTG+TGG + Chr8:27325982-27326001 None:intergenic 40.0%
CTTGACCATTTAGACCTGTT+TGG + Chr8:27326512-27326531 None:intergenic 40.0%
GAAACCAAATCCTAACAGGT+GGG + Chr8:27326631-27326650 None:intergenic 40.0%
GAAAGAGCTAGGTTAGAAGA+TGG - Chr8:27324531-27324550 MsG0880043586.01.T01:three_prime_UTR 40.0%
GAATGTTGCAGTAGAGGTTT+GGG - Chr8:27324866-27324885 MsG0880043586.01.T01:CDS 40.0%
GACTAATGGTCTGTTTGGAT+TGG - Chr8:27326238-27326257 MsG0880043586.01.T01:intron 40.0%
GACTATAAAAGGAGACCCTT+AGG + Chr8:27325741-27325760 None:intergenic 40.0%
GCAACAACTGTGTGTGAATT+AGG - Chr8:27325806-27325825 MsG0880043586.01.T01:CDS 40.0%
GCTAGCAAGTCATAACTTTG+CGG + Chr8:27326805-27326824 None:intergenic 40.0%
GCTCAGATTACTGTTGTACA+AGG + Chr8:27329049-27329068 None:intergenic 40.0%
TAACAGAGACTGAACTTGCA+GGG + Chr8:27326854-27326873 None:intergenic 40.0%
TACCTTACTCCTGAATGCAT+TGG - Chr8:27328684-27328703 MsG0880043586.01.T01:CDS 40.0%
TATAAAAGGAGACCCTTAGG+AGG + Chr8:27325738-27325757 None:intergenic 40.0%
TCATACTGAGTAGCGTAAAG+TGG + Chr8:27327406-27327425 None:intergenic 40.0%
TCGGACATTGCATATACCAT+GGG - Chr8:27327790-27327809 MsG0880043586.01.T01:intron 40.0%
TCTCTAACATTGCACACTTC+AGG + Chr8:27326220-27326239 None:intergenic 40.0%
TGAAACCAAATCCTAACAGG+TGG + Chr8:27326632-27326651 None:intergenic 40.0%
TGTACATAGCAGGTTCCAAA+GGG + Chr8:27328429-27328448 None:intergenic 40.0%
TGTGTCCAAACAGGTCTAAA+TGG - Chr8:27326504-27326523 MsG0880043586.01.T01:intron 40.0%
TTAACATGGACATCACACCT+TGG - Chr8:27324583-27324602 MsG0880043586.01.T01:three_prime_UTR 40.0%
TTATCGGCGATTGACATCAT+TGG - Chr8:27327499-27327518 MsG0880043586.01.T01:intron 40.0%
TTCCTCTAGTCCCTTTAGAT+CGG - Chr8:27325459-27325478 MsG0880043586.01.T01:intron 40.0%
TTGGTAAGGGAAAGACTTCA+AGG - Chr8:27326755-27326774 MsG0880043586.01.T01:intron 40.0%
TTGTTCACGTGTTACAACAG+TGG - Chr8:27325559-27325578 MsG0880043586.01.T01:intron 40.0%
TTTGGAGAATGTTGCAGTAG+AGG - Chr8:27324860-27324879 MsG0880043586.01.T01:CDS 40.0%
! AATCGGATTTGTTCCTCTGT+TGG - Chr8:27325194-27325213 MsG0880043586.01.T01:CDS 40.0%
! AGAATGGCGAGGCAAATTTT+AGG - Chr8:27327239-27327258 MsG0880043586.01.T01:intron 40.0%
! AGCTATGTCTTGCTGTGAAT+AGG - Chr8:27324981-27325000 MsG0880043586.01.T01:CDS 40.0%
! CAGGCAATTGGTTTATGAAC+TGG + Chr8:27326201-27326220 None:intergenic 40.0%
! GAAGTAGAAGTGTACATAGC+AGG + Chr8:27328439-27328458 None:intergenic 40.0%
! GGCTGCAATGACGTTTTATA+TGG - Chr8:27327313-27327332 MsG0880043586.01.T01:intron 40.0%
!! AAGAGAGTGTTGAGAATGGT+CGG + Chr8:27324635-27324654 None:intergenic 40.0%
!! ACATTTGGTGGACTGTAAAC+TGG + Chr8:27326125-27326144 None:intergenic 40.0%
!! AGGAAAGAGAGTGTTGAGAA+TGG + Chr8:27324639-27324658 None:intergenic 40.0%
!! GTATGAAGCGTCGTCAATAA+CGG - Chr8:27327420-27327439 MsG0880043586.01.T01:intron 40.0%
!! TATGACTTGCTAGCCATGTT+TGG - Chr8:27326811-27326830 MsG0880043586.01.T01:CDS 40.0%
!!! CAAGTTACCTTGTTTTCACC+AGG - Chr8:27328312-27328331 MsG0880043586.01.T01:intron 40.0%
AAACAACCAGCTTCATCCCA+TGG + Chr8:27327809-27327828 None:intergenic 45.0%
AACCGATCTAAAGGGACTAG+AGG + Chr8:27325464-27325483 None:intergenic 45.0%
ACCAAACGTCAAGCCTGTTA+AGG - Chr8:27326065-27326084 MsG0880043586.01.T01:intron 45.0%
AGCGTAGCAGTGTGGTTAAA+TGG - Chr8:27327195-27327214 MsG0880043586.01.T01:intron 45.0%
AGGTCGTGAGACACTTGAAT+GGG - Chr8:27325955-27325974 MsG0880043586.01.T01:intron 45.0%
ATAATGTTGTCAACGGCGGA+AGG + Chr8:27327350-27327369 None:intergenic 45.0%
ATCAGGTGGATGAAGCTATG+TGG - Chr8:27326982-27327001 MsG0880043586.01.T01:intron 45.0%
ATGCTCTGATTTCACGTGTC+AGG + Chr8:27325898-27325917 None:intergenic 45.0%
CAACACTCTCTTTCCTCTCT+TGG - Chr8:27324643-27324662 MsG0880043586.01.T01:three_prime_UTR 45.0%
CATATACCATGGGATGAAGC+TGG - Chr8:27327800-27327819 MsG0880043586.01.T01:intron 45.0%
CATTGCACACTTCAGGCAAT+TGG + Chr8:27326213-27326232 None:intergenic 45.0%
CTAACAGAGACTGAACTTGC+AGG + Chr8:27326855-27326874 None:intergenic 45.0%
CTACGTCGTCAATACCAGAT+AGG + Chr8:27327877-27327896 None:intergenic 45.0%
CTCAGAGACTAACTGATGGT+GGG - Chr8:27327960-27327979 MsG0880043586.01.T01:intron 45.0%
CTCCAATGCATTCAGGAGTA+AGG + Chr8:27328689-27328708 None:intergenic 45.0%
CTCGGACATTGCATATACCA+TGG - Chr8:27327789-27327808 MsG0880043586.01.T01:intron 45.0%
GAAAGAAGCTCATGCCTTGA+TGG - Chr8:27327043-27327062 MsG0880043586.01.T01:intron 45.0%
GACTACACTCCAATGCATTC+AGG + Chr8:27328696-27328715 None:intergenic 45.0%
GCAATGTCCGAGAAGATATC+TGG + Chr8:27327781-27327800 None:intergenic 45.0%
GGGCAACCCCTCATAATAAA+AGG - Chr8:27328533-27328552 MsG0880043586.01.T01:intron 45.0%
GTAAGGGAAAGACTTCAAGG+TGG - Chr8:27326758-27326777 MsG0880043586.01.T01:intron 45.0%
GTAGCAGTGTGGTTAAATGG+TGG - Chr8:27327198-27327217 MsG0880043586.01.T01:intron 45.0%
GTGTACATAGCAGGTTCCAA+AGG + Chr8:27328430-27328449 None:intergenic 45.0%
GTGTGGTTAAATGGTGGTCA+TGG - Chr8:27327204-27327223 MsG0880043586.01.T01:intron 45.0%
GTTCCTACGAATACCAACAG+AGG + Chr8:27325210-27325229 None:intergenic 45.0%
GTTCCTCTGTTGGTATTCGT+AGG - Chr8:27325204-27325223 MsG0880043586.01.T01:CDS 45.0%
GTTTCTACCTTTCCTCACTC+TGG - Chr8:27324679-27324698 MsG0880043586.01.T01:three_prime_UTR 45.0%
TAAAACGTCATTGCAGCCCA+TGG + Chr8:27327311-27327330 None:intergenic 45.0%
TAAACTGGTATGGGTCGATC+AGG + Chr8:27326110-27326129 None:intergenic 45.0%
TAATTACGATGCACCTGGAG+AGG - Chr8:27327850-27327869 MsG0880043586.01.T01:intron 45.0%
TCAGGTGGATGAAGCTATGT+GGG - Chr8:27326983-27327002 MsG0880043586.01.T01:intron 45.0%
TCTCAGAGACTAACTGATGG+TGG - Chr8:27327959-27327978 MsG0880043586.01.T01:intron 45.0%
TGCTGTGAGAGGTCTTAAGA+GGG - Chr8:27324889-27324908 MsG0880043586.01.T01:CDS 45.0%
TTAACAGGCTTGACGTTTGG+TGG + Chr8:27326066-27326085 None:intergenic 45.0%
TTGTGAATGAATGCCCACCA+TGG - Chr8:27327280-27327299 MsG0880043586.01.T01:intron 45.0%
! TTGCTTGCCTTTCTGGTACT+TGG - Chr8:27327551-27327570 MsG0880043586.01.T01:intron 45.0%
!! GGTGGACTGTAAACTGGTAT+GGG + Chr8:27326119-27326138 None:intergenic 45.0%
!! GTACGAGTTCTGAAAGAGCT+AGG - Chr8:27324520-27324539 MsG0880043586.01.T01:three_prime_UTR 45.0%
!! GTCGTCAATAACGGATAGAG+CGG - Chr8:27327429-27327448 MsG0880043586.01.T01:intron 45.0%
!! TGGTGGACTGTAAACTGGTA+TGG + Chr8:27326120-27326139 None:intergenic 45.0%
AACTTTGCGGCAAATGGACG+AGG + Chr8:27326792-27326811 None:intergenic 50.0%
ACTAGCTGCGTTACGACTGT+GGG - Chr8:27328513-27328532 MsG0880043586.01.T01:intron 50.0%
ATACCAGATAGGTCCTCTCC+AGG + Chr8:27327866-27327885 None:intergenic 50.0%
ATACCTGAGCCTCCATGAGA+CGG + Chr8:27328874-27328893 None:intergenic 50.0%
ATGAGCGTAAGTGCCTCCTA+AGG - Chr8:27325722-27325741 MsG0880043586.01.T01:CDS 50.0%
CAGGTCGTGAGACACTTGAA+TGG - Chr8:27325954-27325973 MsG0880043586.01.T01:intron 50.0%
CGAGAAGGTCAATGGATAGG+TGG - Chr8:27328841-27328860 MsG0880043586.01.T01:intron 50.0%
CTCTTCTCTCTCCTCTGTTC+AGG - Chr8:27325006-27325025 MsG0880043586.01.T01:CDS 50.0%
GACCATAGTCACACCAACCA+TGG + Chr8:27326025-27326044 None:intergenic 50.0%
GCAGAGAGAATGACCAAGAG+AGG + Chr8:27324659-27324678 None:intergenic 50.0%
GCCTTAACAGGCTTGACGTT+TGG + Chr8:27326069-27326088 None:intergenic 50.0%
GCTGGTTGTTTATGCCCTGT+TGG - Chr8:27327818-27327837 MsG0880043586.01.T01:intron 50.0%
GCTGTGAGAGGTCTTAAGAG+GGG - Chr8:27324890-27324909 MsG0880043586.01.T01:CDS 50.0%
GGAAATTAGCCGTCTCATGG+AGG - Chr8:27328862-27328881 MsG0880043586.01.T01:intron 50.0%
GGTGGAAATTAGCCGTCTCA+TGG - Chr8:27328859-27328878 MsG0880043586.01.T01:intron 50.0%
GTATTCTTGGAGCTCCTCCT+AGG + Chr8:27325659-27325678 None:intergenic 50.0%
GTCGGACGTCTTGCATATTC+TGG - Chr8:27328562-27328581 MsG0880043586.01.T01:intron 50.0%
GTGCTGTGAGAGGTCTTAAG+AGG - Chr8:27324888-27324907 MsG0880043586.01.T01:CDS 50.0%
GTTGCTATAGCGTAGCAGTG+TGG - Chr8:27327187-27327206 MsG0880043586.01.T01:intron 50.0%
TACTAGCTGCGTTACGACTG+TGG - Chr8:27328512-27328531 MsG0880043586.01.T01:intron 50.0%
TCTACCTTTCCTCACTCTGG+CGG - Chr8:27324682-27324701 MsG0880043586.01.T01:three_prime_UTR 50.0%
TGAGCCCACCTGTTAGGATT+TGG - Chr8:27326624-27326643 MsG0880043586.01.T01:CDS 50.0%
TGAGCGTAAGTGCCTCCTAA+GGG - Chr8:27325723-27325742 MsG0880043586.01.T01:CDS 50.0%
TTACAACAGTGGAGCTGCCT+AGG - Chr8:27325570-27325589 MsG0880043586.01.T01:intron 50.0%
! AACAGGTGGGCTCAATGCTT+TGG + Chr8:27326618-27326637 None:intergenic 50.0%
! CTGATTTGCACAGCCCAGTT+GGG - Chr8:27325989-27326008 MsG0880043586.01.T01:intron 50.0%
! TGATTTGCACAGCCCAGTTG+GGG - Chr8:27325990-27326009 MsG0880043586.01.T01:intron 50.0%
! TGCCATGGTTGGTGTGACTA+TGG - Chr8:27326020-27326039 MsG0880043586.01.T01:intron 50.0%
!! AAGCATTGAGCCCACCTGTT+AGG - Chr8:27326618-27326637 MsG0880043586.01.T01:CDS 50.0%
CTACCTTTCCTCACTCTGGC+GGG - Chr8:27324683-27324702 MsG0880043586.01.T01:three_prime_UTR 55.0%
GATTTGCACAGCCCAGTTGG+GGG - Chr8:27325991-27326010 MsG0880043586.01.T01:intron 55.0%
GCAGCTAGTAGCGCAAACGA+AGG + Chr8:27328502-27328521 None:intergenic 55.0%
TCAGCTTCCCATGCCCTGTA+CGG + Chr8:27325843-27325862 None:intergenic 55.0%
TGCGGCAAATGGACGAGGTA+AGG + Chr8:27326787-27326806 None:intergenic 55.0%
TTACCCGCCAGAGTGAGGAA+AGG + Chr8:27324689-27324708 None:intergenic 55.0%
TTTGCCTCGCCATTCTGCCA+TGG + Chr8:27327235-27327254 None:intergenic 55.0%
! AGAGGTTTGGGTGCTGTGAG+AGG - Chr8:27324878-27324897 MsG0880043586.01.T01:CDS 55.0%
! CTCTCGTTGGTTGGCTGGTA+CGG - Chr8:27325784-27325803 MsG0880043586.01.T01:CDS 55.0%
! TGACTTGATGGGCCTCTCGT+TGG - Chr8:27325771-27325790 MsG0880043586.01.T01:CDS 55.0%
! TTGATGGGCCTCTCGTTGGT+TGG - Chr8:27325775-27325794 MsG0880043586.01.T01:CDS 55.0%
!! ATGGCTTTGGGCTGCTGCAA+CGG - Chr8:27327106-27327125 MsG0880043586.01.T01:intron 55.0%
!! GACGTTTGGTGGACTGTGGT+TGG + Chr8:27326055-27326074 None:intergenic 55.0%
!! GCTGATTTGCACAGCCCAGT+TGG - Chr8:27325988-27326007 MsG0880043586.01.T01:intron 55.0%
!! GCTTGACGTTTGGTGGACTG+TGG + Chr8:27326059-27326078 None:intergenic 55.0%
AGCCCATGGAGACTCCATGG+TGG + Chr8:27327297-27327316 None:intergenic 60.0%
AGCTCGTCCGTACAGGGCAT+GGG - Chr8:27325833-27325852 MsG0880043586.01.T01:CDS 60.0%
AGGTTGCAGCTCGTCCGTAC+AGG - Chr8:27325826-27325845 MsG0880043586.01.T01:CDS 60.0%
CAACAGTGGAGCTGCCTAGG+AGG - Chr8:27325573-27325592 MsG0880043586.01.T01:intron 60.0%
CGTACCAGCCAACCAACGAG+AGG + Chr8:27325786-27325805 None:intergenic 60.0%
GCACCTGGAGAGGACCTATC+TGG - Chr8:27327860-27327879 MsG0880043586.01.T01:intron 60.0%
GCCCACCATGGAGTCTCCAT+GGG - Chr8:27327292-27327311 MsG0880043586.01.T01:intron 60.0%
GCCCATGGAGACTCCATGGT+GGG + Chr8:27327296-27327315 None:intergenic 60.0%
GGTTGCAGCTCGTCCGTACA+GGG - Chr8:27325827-27325846 MsG0880043586.01.T01:CDS 60.0%
TAGCCGTCTCATGGAGGCTC+AGG - Chr8:27328868-27328887 MsG0880043586.01.T01:intron 60.0%
TGCAGCCCATGGAGACTCCA+TGG + Chr8:27327300-27327319 None:intergenic 60.0%
TGCCCACCATGGAGTCTCCA+TGG - Chr8:27327291-27327310 MsG0880043586.01.T01:intron 60.0%
! TCCTCACTCTGGCGGGTAAC+TGG - Chr8:27324690-27324709 MsG0880043586.01.T01:three_prime_UTR 60.0%
!! ATGGTGCCGCCATGGCAGAA+TGG - Chr8:27327223-27327242 MsG0880043586.01.T01:intron 60.0%
CAGCTCGTCCGTACAGGGCA+TGG - Chr8:27325832-27325851 MsG0880043586.01.T01:CDS 65.0%
GCCAGTTACCCGCCAGAGTG+AGG + Chr8:27324694-27324713 None:intergenic 65.0%
GCCTCGCCATTCTGCCATGG+CGG + Chr8:27327232-27327251 None:intergenic 65.0%
GCTTACGTCACTGTGCCGCG+TGG - Chr8:27325931-27325950 MsG0880043586.01.T01:intron 65.0%
GTGTCTCACGACCTGCCACG+CGG + Chr8:27325949-27325968 None:intergenic 65.0%
! TGGGCCTCTCGTTGGTTGGC+TGG - Chr8:27325779-27325798 MsG0880043586.01.T01:CDS 65.0%
!! TGGTGGTCATGGTGCCGCCA+TGG - Chr8:27327215-27327234 MsG0880043586.01.T01:intron 65.0%
ACGTCACTGTGCCGCGTGGC+AGG - Chr8:27325935-27325954 MsG0880043586.01.T01:intron 70.0%
ATGGCAAGCGCGCCCCCAAC+TGG + Chr8:27326006-27326025 None:intergenic 70.0%
GCCGCCATGGCAGAATGGCG+AGG - Chr8:27327228-27327247 MsG0880043586.01.T01:intron 70.0%
TGGCAAGCGCGCCCCCAACT+GGG + Chr8:27326005-27326024 None:intergenic 70.0%
! AGTTGGGGGCGCGCTTGCCA+TGG - Chr8:27326005-27326024 MsG0880043586.01.T01:intron 70.0%
! GGGGGCGCGCTTGCCATGGT+TGG - Chr8:27326009-27326028 MsG0880043586.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 27324490 27329176 27324490 ID=MsG0880043586.01;Name=MsG0880043586.01
Chr8 mRNA 27324490 27329176 27324490 ID=MsG0880043586.01.T01;Parent=MsG0880043586.01;Name=MsG0880043586.01.T01;_AED=0.07;_eAED=0.07;_QI=60|1|1|1|1|1|6|306|459
Chr8 exon 27324490 27325332 27324490 ID=MsG0880043586.01.T01:exon:8664;Parent=MsG0880043586.01.T01
Chr8 exon 27325621 27325884 27325621 ID=MsG0880043586.01.T01:exon:8663;Parent=MsG0880043586.01.T01
Chr8 exon 27326539 27326679 27326539 ID=MsG0880043586.01.T01:exon:8662;Parent=MsG0880043586.01.T01
Chr8 exon 27326808 27326939 27326808 ID=MsG0880043586.01.T01:exon:8661;Parent=MsG0880043586.01.T01
Chr8 exon 27328639 27328789 27328639 ID=MsG0880043586.01.T01:exon:8660;Parent=MsG0880043586.01.T01
Chr8 exon 27328962 27329176 27328962 ID=MsG0880043586.01.T01:exon:8659;Parent=MsG0880043586.01.T01
Chr8 five_prime_UTR 27329117 27329176 27329117 ID=MsG0880043586.01.T01:five_prime_utr;Parent=MsG0880043586.01.T01
Chr8 CDS 27328962 27329116 27328962 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 CDS 27328639 27328789 27328639 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 CDS 27326808 27326939 27326808 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 CDS 27326539 27326679 27326539 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 CDS 27325621 27325884 27325621 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 CDS 27324796 27325332 27324796 ID=MsG0880043586.01.T01:cds;Parent=MsG0880043586.01.T01
Chr8 three_prime_UTR 27324490 27324795 27324490 ID=MsG0880043586.01.T01:three_prime_utr;Parent=MsG0880043586.01.T01
Gene Sequence

>MsG0880043586.01.T01

ATGGAACAAGAACATGGAAGGTTTGAAAGGTTCTTAACATGGACATCACACCTTGGAATATCAGATTCAACAACAACAAACACCGACCATTCTCAACACTCTCTTTCCTCTCTTGGTCATTCTCTCTGCGTTTCTACCTTTCCTCACTCTGGCGGTAGAGGTTTGGGTGCTGTGAGAGGTCTTAAGAGGGGAGAAATTATTCTCAGAGTTCCAAAATCTGCTTTAATGACTAGTGAGAGTGTTATTATTGAAGATAAGAAGCTATGTCTTGCTGTGAATAGGCACTCTTCTCTCTCCTCTGTTCAGATATTGACTGTTTGCTTGTTATACGAAGTTGGTAAGGGAAAGACTTCAAGGTGGCATCCTTACCTCGTCCATTTGCCGCAAAGTTATGACTTGCTAGCCATGTTTGGTGAATTTGAGAAACAAGCCCTGCAAGTGGATGAAGCTATGTGGGTCACAGAAAAAGCTGTACAAAAAGCTAAATCAGAATGGAAAGAAGCTCATGCCTTGATGGAAGAACTGATGTTTAAGCCTCGGTTTTTAACATTTAAGGCATGGCTTTGGGCTGCTGCAACGATATCTTCTCGGACATTGCATATACCATGGGATGAAGCTGGTTGTTTATGCCCTGTTGGTGACTTGTTTAATTACGATGCACCTGGAGAGGACCTATCTGGTATTGACGACGTAGATAATTTTCAATCAAATGGAGACAAGAATGGAATGGTAGACGAAGAGCATATTGATTTTCATTCTCAGAGACTAACTGATGGTGGGTTTGAAGAAGATGCTAATGCATATTGCTTTTATGCTAGGACAAATTACAAGAAAGGCGATCAGGTTCTATTATGCTATGGAACATATACAAATTTTGAGCTTCTTGAACACTACGGATTTCTCTTACAAGAAAATCCAAATGACAAAATTTTCATCCCTTTGGAACCTGCTATGTACACTTCTACTTCATGGTCTAAGGAATCACTCTATATCCATCCCAACGGAAAACCTTCGTTTGCGCTACTAGCTGCGTTACGACTGTGGGCAACCCCTCATAATAAAAGGAGGTCTGTCGGACGTCTTGCATATTCTGGTTCTCAACTGTCTGCTGACAATGAAATCATCGTTATGAAATGGTTGTCGAAAACTTGTGACACTGTCTTAAAGAATATGCCAACATCTATTGAAGACGATACCTTACTCCTGAATGCATTGGAGTGTAGTCAAGACTTTATAACTTTCATGAAGATTGTTAAACTTATGTCATTCAGGGATGAAGTTTATACCTTCTTAGAAGCTCATAATGTAACAGACGCACTTAGTTTTTGTGATGTAATTTCATCTATGAAACGAGAAGGTCAATGGATAGGTGGAAATTAG
Protein sequence

>MsG0880043586.01.T01

MEQEHGRFERFLTWTSHLGISDSTTTNTDHSQHSLSSLGHSLCVSTFPHSGGRGLGAVRGLKRGEIILRVPKSALMTSESVIIEDKKLCLAVNRHSSLSSVQILTVCLLYEVGKGKTSRWHPYLVHLPQSYDLLAMFGEFEKQALQVDEAMWVTEKAVQKAKSEWKEAHALMEELMFKPRFLTFKAWLWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEDLSGIDDVDNFQSNGDKNGMVDEEHIDFHSQRLTDGGFEEDANAYCFYARTNYKKGDQVLLCYGTYTNFELLEHYGFLLQENPNDKIFIPLEPAMYTSTSWSKESLYIHPNGKPSFALLAALRLWATPHNKRRSVGRLAYSGSQLSADNEIIVMKWLSKTCDTVLKNMPTSIEDDTLLLNALECSQDFITFMKIVKLMSFRDEVYTFLEAHNVTDALSFCDVISSMKREGQWIGGN*