Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046227.01.T01 | XP_003608836.1 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046227.01.T01 | Q8LBB2 | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046227.01.T01 | G7JLE4 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048256.01 | MsG0880046227.01 | 0.829089 | 6.255371e-55 | 6.336853e-52 |
| MsG0080048595.01 | MsG0880046227.01 | 0.801576 | 8.437390e-49 | 4.043379e-46 |
| MsG0080048909.01 | MsG0880046227.01 | -0.810611 | 1.057498e-50 | 6.403958e-48 |
| MsG0080049016.01 | MsG0880046227.01 | -0.802001 | 6.902438e-49 | 3.343599e-46 |
| MsG0180000120.01 | MsG0880046227.01 | -0.802675 | 5.014114e-49 | 2.470954e-46 |
| MsG0180000322.01 | MsG0880046227.01 | -0.809114 | 2.220194e-50 | 1.292344e-47 |
| MsG0180001614.01 | MsG0880046227.01 | -0.804299 | 2.308814e-49 | 1.186189e-46 |
| MsG0180001873.01 | MsG0880046227.01 | -0.801715 | 7.900648e-49 | 3.799434e-46 |
| MsG0880045073.01 | MsG0880046227.01 | -0.802889 | 4.527899e-49 | 2.243658e-46 |
| MsG0880045252.01 | MsG0880046227.01 | -0.806043 | 9.962820e-50 | 5.353392e-47 |
| MsG0880045259.01 | MsG0880046227.01 | -0.826808 | 2.213460e-54 | 2.097870e-51 |
| MsG0880045261.01 | MsG0880046227.01 | -0.821483 | 3.941438e-53 | 3.210625e-50 |
| MsG0880045772.01 | MsG0880046227.01 | -0.819103 | 1.384517e-52 | 1.055578e-49 |
| MsG0880046024.01 | MsG0880046227.01 | -0.853043 | 3.100557e-61 | 6.610811e-58 |
| MsG0880046025.01 | MsG0880046227.01 | -0.828378 | 9.292430e-55 | 9.220566e-52 |
| MsG0880046135.01 | MsG0880046227.01 | 0.890168 | 1.257367e-73 | 1.045477e-69 |
| MsG0880046227.01 | MsG0880046456.01 | -0.804520 | 2.076669e-49 | 1.072957e-46 |
| MsG0880046227.01 | MsG0880046584.01 | -0.805812 | 1.114218e-49 | 5.951821e-47 |
| MsG0880046227.01 | MsG0880046639.01 | -0.806813 | 6.854588e-50 | 3.756536e-47 |
| MsG0880046227.01 | MsG0880046854.01 | -0.814060 | 1.866850e-51 | 1.239884e-48 |
| MsG0880046227.01 | MsG0880047627.01 | -0.800991 | 1.111628e-48 | 5.249552e-46 |
| MsG0880046227.01 | MsG0880047669.01 | -0.826355 | 2.838897e-54 | 2.656174e-51 |
| MsG0180002982.01 | MsG0880046227.01 | -0.825745 | 3.963745e-54 | 3.644820e-51 |
| MsG0180003114.01 | MsG0880046227.01 | -0.801360 | 9.342633e-49 | 4.452952e-46 |
| MsG0180003453.01 | MsG0880046227.01 | -0.838284 | 3.150499e-57 | 4.199526e-54 |
| MsG0180003604.01 | MsG0880046227.01 | 0.821275 | 4.402152e-53 | 3.565022e-50 |
| MsG0180004187.01 | MsG0880046227.01 | -0.807710 | 4.425145e-50 | 2.482231e-47 |
| MsG0180004193.01 | MsG0880046227.01 | -0.815461 | 9.137208e-52 | 6.303907e-49 |
| MsG0180004302.01 | MsG0880046227.01 | -0.820076 | 8.304488e-53 | 6.505893e-50 |
| MsG0180004458.01 | MsG0880046227.01 | -0.838039 | 3.643849e-57 | 4.821854e-54 |
| MsG0180004504.01 | MsG0880046227.01 | -0.824056 | 9.922699e-54 | 8.693626e-51 |
| MsG0180004580.01 | MsG0880046227.01 | -0.803083 | 4.129457e-49 | 2.056171e-46 |
| MsG0180004581.01 | MsG0880046227.01 | -0.801614 | 8.285755e-49 | 3.974444e-46 |
| MsG0180004773.01 | MsG0880046227.01 | -0.805996 | 1.019330e-49 | 5.470861e-47 |
| MsG0180004852.01 | MsG0880046227.01 | -0.845011 | 5.297313e-59 | 8.708243e-56 |
| MsG0180004865.01 | MsG0880046227.01 | -0.823856 | 1.105604e-53 | 9.633272e-51 |
| MsG0180004937.01 | MsG0880046227.01 | -0.806906 | 6.550574e-50 | 3.598481e-47 |
| MsG0180004957.01 | MsG0880046227.01 | -0.811476 | 6.870257e-51 | 4.257051e-48 |
| MsG0180005226.01 | MsG0880046227.01 | -0.808940 | 2.418819e-50 | 1.401327e-47 |
| MsG0180005283.01 | MsG0880046227.01 | -0.818444 | 1.953763e-52 | 1.462878e-49 |
| MsG0180005758.01 | MsG0880046227.01 | 0.861340 | 1.098949e-63 | 3.099596e-60 |
| MsG0180005760.01 | MsG0880046227.01 | -0.820159 | 7.947387e-53 | 6.240286e-50 |
| MsG0180005806.01 | MsG0880046227.01 | -0.841411 | 4.831034e-58 | 7.092919e-55 |
| MsG0280006451.01 | MsG0880046227.01 | -0.816754 | 4.697967e-52 | 3.357831e-49 |
| MsG0780040321.01 | MsG0880046227.01 | -0.801807 | 7.564697e-49 | 3.646452e-46 |
| MsG0780040649.01 | MsG0880046227.01 | -0.837990 | 3.751409e-57 | 4.956912e-54 |
| MsG0780041119.01 | MsG0880046227.01 | 0.829794 | 4.215983e-55 | 4.360769e-52 |
| MsG0780041249.01 | MsG0880046227.01 | -0.832714 | 8.074086e-56 | 9.099460e-53 |
| MsG0780041501.01 | MsG0880046227.01 | 0.801886 | 7.286140e-49 | 3.519446e-46 |
| MsG0880041835.01 | MsG0880046227.01 | -0.808595 | 2.866658e-50 | 1.645785e-47 |
| MsG0880042043.01 | MsG0880046227.01 | -0.806940 | 6.442580e-50 | 3.542327e-47 |
| MsG0880042895.01 | MsG0880046227.01 | -0.843834 | 1.097731e-58 | 1.739041e-55 |
| MsG0880042921.01 | MsG0880046227.01 | -0.876644 | 1.185415e-68 | 5.791557e-65 |
| MsG0880043515.01 | MsG0880046227.01 | -0.817349 | 3.454171e-52 | 2.509308e-49 |
| MsG0880043913.01 | MsG0880046227.01 | -0.807610 | 4.646239e-50 | 2.599394e-47 |
| MsG0280010803.01 | MsG0880046227.01 | -0.836375 | 9.708710e-57 | 1.221228e-53 |
| MsG0280011279.01 | MsG0880046227.01 | -0.804038 | 2.616403e-49 | 1.335269e-46 |
| MsG0280011372.01 | MsG0880046227.01 | -0.813607 | 2.350031e-51 | 1.541731e-48 |
| MsG0380014183.01 | MsG0880046227.01 | -0.808316 | 3.288103e-50 | 1.874113e-47 |
| MsG0380014558.01 | MsG0880046227.01 | -0.807774 | 4.288279e-50 | 2.409474e-47 |
| MsG0380014767.01 | MsG0880046227.01 | 0.821202 | 4.575689e-53 | 3.698483e-50 |
| MsG0680030878.01 | MsG0880046227.01 | -0.801129 | 1.041447e-48 | 4.935166e-46 |
| MsG0680031791.01 | MsG0880046227.01 | -0.801625 | 8.241481e-49 | 3.954323e-46 |
| MsG0680034255.01 | MsG0880046227.01 | 0.804966 | 1.676344e-49 | 8.762066e-47 |
| MsG0680034316.01 | MsG0880046227.01 | 0.831418 | 1.688503e-55 | 1.831161e-52 |
| MsG0680034317.01 | MsG0880046227.01 | 0.854448 | 1.222770e-61 | 2.731548e-58 |
| MsG0680034431.01 | MsG0880046227.01 | -0.824106 | 9.662731e-54 | 8.477856e-51 |
| MsG0680034980.01 | MsG0880046227.01 | 0.826949 | 2.048468e-54 | 1.949575e-51 |
| MsG0480018631.01 | MsG0880046227.01 | -0.832956 | 7.031883e-56 | 7.982053e-53 |
| MsG0480018844.01 | MsG0880046227.01 | -0.862961 | 3.496667e-64 | 1.042752e-60 |
| MsG0480019349.01 | MsG0880046227.01 | -0.802833 | 4.651349e-49 | 2.301654e-46 |
| MsG0480020122.01 | MsG0880046227.01 | -0.800418 | 1.454755e-48 | 6.770532e-46 |
| MsG0480021308.01 | MsG0880046227.01 | -0.822175 | 2.726309e-53 | 2.264731e-50 |
| MsG0480021654.01 | MsG0880046227.01 | -0.829005 | 6.556949e-55 | 6.625309e-52 |
| MsG0480021856.01 | MsG0880046227.01 | -0.844796 | 6.054683e-59 | 9.886653e-56 |
| MsG0480022297.01 | MsG0880046227.01 | -0.803330 | 3.671160e-49 | 1.839639e-46 |
| MsG0480022637.01 | MsG0880046227.01 | 0.843554 | 1.304856e-58 | 2.049065e-55 |
| MsG0480022804.01 | MsG0880046227.01 | -0.808104 | 3.648567e-50 | 2.067887e-47 |
| MsG0480023211.01 | MsG0880046227.01 | -0.801428 | 9.046641e-49 | 4.319214e-46 |
| MsG0480023264.01 | MsG0880046227.01 | -0.802429 | 5.634127e-49 | 2.759344e-46 |
| MsG0480023298.01 | MsG0880046227.01 | -0.842143 | 3.096517e-58 | 4.651490e-55 |
| MsG0480023371.01 | MsG0880046227.01 | -0.804746 | 1.862724e-49 | 9.681695e-47 |
| MsG0480023483.01 | MsG0880046227.01 | -0.808415 | 3.131973e-50 | 1.789732e-47 |
| MsG0480023502.01 | MsG0880046227.01 | -0.854955 | 8.720039e-62 | 1.981073e-58 |
| MsG0480023538.01 | MsG0880046227.01 | -0.806938 | 6.448861e-50 | 3.545557e-47 |
| MsG0480023850.01 | MsG0880046227.01 | -0.811806 | 5.823964e-51 | 3.640148e-48 |
| MsG0580025317.01 | MsG0880046227.01 | -0.809359 | 1.967947e-50 | 1.153046e-47 |
| MsG0580025325.01 | MsG0880046227.01 | -0.802278 | 6.052756e-49 | 2.952906e-46 |
| MsG0580025447.01 | MsG0880046227.01 | -0.802792 | 4.742559e-49 | 2.344258e-46 |
| MsG0580025997.01 | MsG0880046227.01 | -0.804763 | 1.848335e-49 | 9.610547e-47 |
| MsG0380015541.01 | MsG0880046227.01 | 0.888314 | 6.592389e-73 | 5.082265e-69 |
| MsG0380015809.01 | MsG0880046227.01 | 0.832604 | 8.599361e-56 | 9.659207e-53 |
| MsG0380015883.01 | MsG0880046227.01 | -0.804560 | 2.037276e-49 | 1.053714e-46 |
| MsG0380016176.01 | MsG0880046227.01 | 0.865091 | 7.593530e-65 | 2.440338e-61 |
| MsG0380016478.01 | MsG0880046227.01 | -0.804817 | 1.800816e-49 | 9.376915e-47 |
| MsG0380016623.01 | MsG0880046227.01 | -0.800822 | 1.203459e-48 | 5.658352e-46 |
| MsG0380016896.01 | MsG0880046227.01 | -0.803475 | 3.424956e-49 | 1.722756e-46 |
| MsG0380017647.01 | MsG0880046227.01 | -0.808544 | 2.940370e-50 | 1.685870e-47 |
| MsG0380017780.01 | MsG0880046227.01 | 0.865961 | 4.038496e-65 | 1.338404e-61 |
| MsG0380018070.01 | MsG0880046227.01 | 0.888529 | 5.444857e-73 | 4.233649e-69 |
| MsG0480018323.01 | MsG0880046227.01 | -0.813152 | 2.957857e-51 | 1.916508e-48 |
| MsG0580028092.01 | MsG0880046227.01 | -0.815571 | 8.633552e-52 | 5.974282e-49 |
| MsG0580028209.01 | MsG0880046227.01 | -0.814984 | 1.166131e-51 | 7.940772e-49 |
| MsG0580028587.01 | MsG0880046227.01 | 0.815124 | 1.085368e-51 | 7.418755e-49 |
| MsG0580029275.01 | MsG0880046227.01 | 0.813957 | 1.967673e-51 | 1.303138e-48 |
| MsG0580029820.01 | MsG0880046227.01 | -0.854280 | 1.367734e-61 | 3.038996e-58 |
| MsG0580029918.01 | MsG0880046227.01 | -0.834001 | 3.857466e-56 | 4.518267e-53 |
| MsG0580030135.01 | MsG0880046227.01 | 0.802098 | 6.591898e-49 | 3.201127e-46 |
| MsG0580030203.01 | MsG0880046227.01 | -0.809262 | 2.063653e-50 | 1.205989e-47 |
| MsG0680030399.01 | MsG0880046227.01 | -0.808633 | 2.813501e-50 | 1.616844e-47 |
| MsG0280006855.01 | MsG0880046227.01 | 0.835961 | 1.237133e-56 | 1.536669e-53 |
| MsG0280007016.01 | MsG0880046227.01 | -0.832389 | 9.721117e-56 | 1.084975e-52 |
| MsG0280007017.01 | MsG0880046227.01 | -0.803167 | 3.966768e-49 | 1.979581e-46 |
| MsG0280007142.01 | MsG0880046227.01 | -0.827230 | 1.754520e-54 | 1.683568e-51 |
| MsG0280007201.01 | MsG0880046227.01 | 0.804706 | 1.898943e-49 | 9.859183e-47 |
| MsG0280007227.01 | MsG0880046227.01 | 0.814810 | 1.274688e-51 | 8.639427e-49 |
| MsG0280007418.01 | MsG0880046227.01 | -0.807411 | 5.120692e-50 | 2.850238e-47 |
| MsG0280007628.01 | MsG0880046227.01 | -0.807209 | 5.653364e-50 | 3.130149e-47 |
| MsG0280007902.01 | MsG0880046227.01 | -0.831234 | 1.873294e-55 | 2.020497e-52 |
| MsG0280007912.01 | MsG0880046227.01 | 0.804971 | 1.672268e-49 | 8.741782e-47 |
| MsG0280008233.01 | MsG0880046227.01 | -0.801899 | 7.243284e-49 | 3.499798e-46 |
| MsG0280010019.01 | MsG0880046227.01 | 0.816813 | 4.556191e-52 | 3.261765e-49 |
| MsG0780036421.01 | MsG0880046227.01 | 0.810503 | 1.115907e-50 | 6.738124e-48 |
| MsG0780036426.01 | MsG0880046227.01 | 0.824683 | 7.068379e-54 | 6.306082e-51 |
| MsG0780036583.01 | MsG0880046227.01 | -0.817584 | 3.057671e-52 | 2.235625e-49 |
| MsG0780038106.01 | MsG0880046227.01 | -0.819726 | 9.980921e-53 | 7.742803e-50 |
| MsG0780038115.01 | MsG0880046227.01 | -0.841244 | 5.343024e-58 | 7.802864e-55 |
| MsG0780038786.01 | MsG0880046227.01 | -0.800473 | 1.417702e-48 | 6.606865e-46 |
| MsG0780038860.01 | MsG0880046227.01 | 0.808820 | 2.566826e-50 | 1.482362e-47 |
| MsG0780039339.01 | MsG0880046227.01 | -0.802704 | 4.944597e-49 | 2.438630e-46 |
| MsG0780039978.01 | MsG0880046227.01 | 0.803012 | 4.271614e-49 | 2.123095e-46 |
| MsG0780039984.01 | MsG0880046227.01 | 0.803534 | 3.330592e-49 | 1.677891e-46 |
| MsG0780040073.01 | MsG0880046227.01 | -0.830826 | 2.359772e-55 | 2.514838e-52 |
| MsG0780040080.01 | MsG0880046227.01 | -0.800073 | 1.710393e-48 | 7.890511e-46 |
| MsG0780040158.01 | MsG0880046227.01 | -0.816690 | 4.856119e-52 | 3.464607e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046227.01.T01 | MTR_4g103550 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
| MsG0880046227.01.T01 | MTR_4g103550 | 97.917 | 336 | 7 | 0 | 1 | 336 | 1 | 336 | 0.0 | 681 |
| MsG0880046227.01.T01 | MTR_5g038570 | 35.556 | 405 | 225 | 4 | 47 | 420 | 40 | 439 | 9.22e-88 | 274 |
| MsG0880046227.01.T01 | MTR_3g116850 | 22.739 | 387 | 251 | 6 | 40 | 405 | 22 | 381 | 1.56e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046227.01.T01 | AT3G48530 | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0.0 | 613 |
| MsG0880046227.01.T01 | AT1G69800 | 37.221 | 403 | 218 | 4 | 45 | 416 | 35 | 433 | 3.19e-84 | 265 |
| MsG0880046227.01.T01 | AT1G69800 | 37.221 | 403 | 218 | 4 | 45 | 416 | 64 | 462 | 5.56e-84 | 265 |
| MsG0880046227.01.T01 | AT1G69800 | 35.455 | 330 | 183 | 2 | 45 | 344 | 35 | 364 | 1.62e-64 | 212 |
Find 122 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAACCCCACGGCTATTT+TGG | 0.161714 | 8:-70788214 | MsG0880046227.01.T01:CDS |
| CTATAATCATGATAGATTTC+TGG | 0.217599 | 8:+70788724 | None:intergenic |
| GGATCTGCAGCGACAACTTC+TGG | 0.254340 | 8:-70789525 | MsG0880046227.01.T01:CDS |
| GGATGAGAGTTGAAGATCTA+TGG | 0.266856 | 8:-70790547 | MsG0880046227.01.T01:CDS |
| TCAAAGTTTGACAGAACTTA+TGG | 0.274031 | 8:+70787924 | None:intergenic |
| ATGGGCTCCGTTTCTTGCTT+TGG | 0.280669 | 8:-70789328 | MsG0880046227.01.T01:CDS |
| TTCAACTCTCATCCCAAGTT+TGG | 0.288163 | 8:+70790556 | None:intergenic |
| CAGAAATCTATCATGATTAT+AGG | 0.291433 | 8:-70788723 | MsG0880046227.01.T01:intron |
| TTAGTGTGATTAGTCCTTCA+AGG | 0.332347 | 8:+70788260 | None:intergenic |
| GAGAAAAGAAGAGGGAATAA+TGG | 0.336001 | 8:-70790618 | MsG0880046227.01.T01:CDS |
| ACTTCAATGGTTTGAAAGTT+GGG | 0.342478 | 8:-70789160 | MsG0880046227.01.T01:CDS |
| CAAGCATTAAGTTTGTCATT+AGG | 0.345513 | 8:+70790500 | None:intergenic |
| TCATTCCGCTAGTCATAATA+AGG | 0.356461 | 8:+70787865 | None:intergenic |
| CTCATCCCAAGTTTGGCTTC+TGG | 0.357377 | 8:+70790563 | None:intergenic |
| CACACCTTGATGATCTGTTT+TGG | 0.359578 | 8:+70789096 | None:intergenic |
| AAACAGGTTCGAGATATTTC+AGG | 0.361042 | 8:-70789360 | MsG0880046227.01.T01:intron |
| GACTTCAATGGTTTGAAAGT+TGG | 0.375366 | 8:-70789161 | MsG0880046227.01.T01:CDS |
| TTGACAAAGAGCAAATTCAT+AGG | 0.378131 | 8:-70788309 | MsG0880046227.01.T01:CDS |
| TATAATCATGATAGATTTCT+GGG | 0.381852 | 8:+70788725 | None:intergenic |
| TCATCTCTTTAAATGCTTGA+AGG | 0.382534 | 8:+70788845 | None:intergenic |
| ATCGGAATAGTTGAGTTTGC+TGG | 0.385140 | 8:-70789999 | MsG0880046227.01.T01:CDS |
| TCAATCCAACTAGCATCTTC+AGG | 0.389432 | 8:+70790029 | None:intergenic |
| ATTCTAACATTAGTTAAAAC+AGG | 0.399857 | 8:+70787979 | None:intergenic |
| GTGAATTCATTACATGCAAA+AGG | 0.403501 | 8:-70788363 | MsG0880046227.01.T01:CDS |
| TCTTTAAATGCTTGAAGGAC+TGG | 0.413459 | 8:+70788850 | None:intergenic |
| AGTTTGGCTTCTGGACTCCT+TGG | 0.419299 | 8:+70790572 | None:intergenic |
| GGCAAAGGAAAAGCAGAAAC+AGG | 0.426999 | 8:+70790464 | None:intergenic |
| TAATGAATTCACTTGACATT+GGG | 0.434316 | 8:+70788374 | None:intergenic |
| CAGAATGTGCCGGACTTCAA+TGG | 0.434447 | 8:-70789173 | MsG0880046227.01.T01:CDS |
| TCCCTCTACCTGCTAATAGC+AGG | 0.435441 | 8:-70788171 | MsG0880046227.01.T01:CDS |
| AGTTTGCTGGAATTGTTGTA+TGG | 0.438748 | 8:-70789986 | MsG0880046227.01.T01:CDS |
| GGCTGAAGCTGTGAAAATAT+TGG | 0.439718 | 8:-70790096 | MsG0880046227.01.T01:CDS |
| GTTGGAGTGGATGGACTCCT+AGG | 0.442102 | 8:+70789618 | None:intergenic |
| AGGAGTCCAGAAGCCAAACT+TGG | 0.448058 | 8:-70790569 | MsG0880046227.01.T01:CDS |
| TTATTATGGGACAATGTGTT+GGG | 0.452049 | 8:-70790723 | MsG0880046227.01.T01:five_prime_UTR |
| ATTATTATGGGACAATGTGT+TGG | 0.452353 | 8:-70790724 | MsG0880046227.01.T01:five_prime_UTR |
| TTGGAGTGGATGGACTCCTA+GGG | 0.452562 | 8:+70789619 | None:intergenic |
| GCTCGAGAACTCGAAGCCTT+AGG | 0.456172 | 8:-70789552 | MsG0880046227.01.T01:CDS |
| CTTGCACTGGTTGGAGTGGA+TGG | 0.469031 | 8:+70789609 | None:intergenic |
| AATAAAATCAGATGCTACCT+TGG | 0.469606 | 8:-70790117 | MsG0880046227.01.T01:CDS |
| GACCTCCGTTAGAAGCTACT+TGG | 0.479934 | 8:-70788416 | MsG0880046227.01.T01:CDS |
| AGTAGCTTCTAACGGAGGTC+AGG | 0.486459 | 8:+70788419 | None:intergenic |
| GAGTGTTCCTGTGGTAGACT+TGG | 0.493238 | 8:-70789250 | MsG0880046227.01.T01:CDS |
| GCTATTGCAGCCGCAGCAAA+CGG | 0.494235 | 8:-70789585 | MsG0880046227.01.T01:CDS |
| GAACTCGAAGCCTTAGGCCT+CGG | 0.497616 | 8:-70789546 | MsG0880046227.01.T01:CDS |
| GACGATGATGGGAACCTTGA+AGG | 0.502311 | 8:-70788274 | MsG0880046227.01.T01:CDS |
| CGCTGCAGATCCGAGGCCTA+AGG | 0.503192 | 8:+70789536 | None:intergenic |
| GTCTATGTTGTGGACGATGA+TGG | 0.505650 | 8:-70788286 | MsG0880046227.01.T01:CDS |
| CCCTCTACCTGCTAATAGCA+GGG | 0.507334 | 8:-70788170 | MsG0880046227.01.T01:CDS |
| GCAATAGCACTTGCACTGGT+TGG | 0.511188 | 8:+70789600 | None:intergenic |
| AAATCAAAGGTGAATAACTT+AGG | 0.517427 | 8:-70790808 | None:intergenic |
| TGTTAAACCCTGCTATTAGC+AGG | 0.522009 | 8:+70788163 | None:intergenic |
| GGTGCATCAACATCCACAAC+AGG | 0.523558 | 8:+70790050 | None:intergenic |
| ACCAACATCAGATAGTTCCT+TGG | 0.525523 | 8:+70789134 | None:intergenic |
| ACCCGCCGTGATTCATATGT+TGG | 0.528785 | 8:-70789196 | MsG0880046227.01.T01:CDS |
| AACAGGTTCGAGATATTTCA+GGG | 0.530914 | 8:-70789359 | MsG0880046227.01.T01:intron |
| ATGCACCTGAAGATGCTAGT+TGG | 0.531504 | 8:-70790034 | MsG0880046227.01.T01:CDS |
| CTTCAATGGTTTGAAAGTTG+GGG | 0.531932 | 8:-70789159 | MsG0880046227.01.T01:CDS |
| ACTTTCAAACCATTGAAGTC+CGG | 0.536216 | 8:+70789164 | None:intergenic |
| TGAATTCATTACATGCAAAA+GGG | 0.536868 | 8:-70788362 | MsG0880046227.01.T01:CDS |
| CCTGTGGTAGACTTGGGTGC+TGG | 0.537100 | 8:-70789243 | MsG0880046227.01.T01:CDS |
| ACCCTGCTATTAGCAGGTAG+AGG | 0.541141 | 8:+70788169 | None:intergenic |
| AAACTACCTTGGTTTGAAGC+AGG | 0.544975 | 8:+70790443 | None:intergenic |
| CAGGTTGAAGATGTGTATCT+AGG | 0.549376 | 8:-70788039 | MsG0880046227.01.T01:three_prime_UTR |
| TTCAAGCATTTAAAGAGATG+AGG | 0.552251 | 8:-70788843 | MsG0880046227.01.T01:CDS |
| GTAATGAATTCACTTGACAT+TGG | 0.553550 | 8:+70788373 | None:intergenic |
| GATGAGAGTTGAAGATCTAT+GGG | 0.553732 | 8:-70790546 | MsG0880046227.01.T01:CDS |
| GATCTCTCCAAAGCAAGAAA+CGG | 0.557531 | 8:+70789321 | None:intergenic |
| CTTCTCCAAGTAGCTTCTAA+CGG | 0.558499 | 8:+70788411 | None:intergenic |
| CCTTGGTTTGAAGCAGGCAA+AGG | 0.559732 | 8:+70790449 | None:intergenic |
| AGAGGTGGCACCACGGCAGT+TGG | 0.561682 | 8:-70788787 | MsG0880046227.01.T01:CDS |
| CCCTGCTATTAGCAGGTAGA+GGG | 0.561914 | 8:+70788170 | None:intergenic |
| TCACAGAACAATTACAGTGA+AGG | 0.562168 | 8:-70788446 | MsG0880046227.01.T01:intron |
| GTGGATGGACTCCTAGGGGA+TGG | 0.565217 | 8:+70789624 | None:intergenic |
| ACCAAGGAACTATCTGATGT+TGG | 0.572252 | 8:-70789135 | MsG0880046227.01.T01:CDS |
| CATATGTTGGCAGAATGTGC+CGG | 0.573538 | 8:-70789183 | MsG0880046227.01.T01:CDS |
| GGCTGCAATAGCACTTGCAC+TGG | 0.573713 | 8:+70789596 | None:intergenic |
| TATTCTGAGTGCACCTGTTG+TGG | 0.573842 | 8:-70790063 | MsG0880046227.01.T01:CDS |
| CTTAGAAAGCAGCAAGAGCA+TGG | 0.576526 | 8:+70789284 | None:intergenic |
| CACAGAGAGAGAAAAGAAGA+GGG | 0.578839 | 8:-70790626 | MsG0880046227.01.T01:CDS |
| ATATTTCAGGGACATTCCGA+TGG | 0.579686 | 8:-70789347 | MsG0880046227.01.T01:CDS |
| AATTCATAGGGTCTATGTTG+TGG | 0.580570 | 8:-70788296 | MsG0880046227.01.T01:CDS |
| CCTTTGCCTGCTTCAAACCA+AGG | 0.581002 | 8:-70790449 | MsG0880046227.01.T01:intron |
| ACACAGAGAGAGAAAAGAAG+AGG | 0.584820 | 8:-70790627 | MsG0880046227.01.T01:CDS |
| GTTTGAAAGTTGGGGAACCA+AGG | 0.585965 | 8:-70789151 | MsG0880046227.01.T01:CDS |
| TGACAAAGAGCAAATTCATA+GGG | 0.586419 | 8:-70788308 | MsG0880046227.01.T01:CDS |
| GAAATCACCAAAATAGCCGT+GGG | 0.590135 | 8:+70788207 | None:intergenic |
| GATGGACTCCTAGGGGATGG+AGG | 0.592826 | 8:+70789627 | None:intergenic |
| GAATAACTTAGGTGTAGTGT+AGG | 0.597224 | 8:-70790797 | MsG0880046227.01.T01:five_prime_UTR |
| AGAAATCACCAAAATAGCCG+TGG | 0.598829 | 8:+70788206 | None:intergenic |
| AGCACTTGCACTGGTTGGAG+TGG | 0.599023 | 8:+70789605 | None:intergenic |
| GGGGTGCCTGTAATCAAAAG+AGG | 0.599309 | 8:-70788805 | MsG0880046227.01.T01:CDS |
| GTTCACCTTATTATGACTAG+CGG | 0.600070 | 8:-70787870 | MsG0880046227.01.T01:three_prime_UTR |
| GGAGTCCAGAAGCCAAACTT+GGG | 0.600493 | 8:-70790568 | MsG0880046227.01.T01:CDS |
| GCCAACATATGAATCACGGC+GGG | 0.600876 | 8:+70789195 | None:intergenic |
| AGTCTGAACCTCCATCCCCT+AGG | 0.601038 | 8:-70789635 | MsG0880046227.01.T01:CDS |
| AGAAGAGGGAATAATGGCAA+TGG | 0.605880 | 8:-70790612 | MsG0880046227.01.T01:CDS |
| TCTATGTTGTGGACGATGAT+GGG | 0.613189 | 8:-70788285 | MsG0880046227.01.T01:CDS |
| AAGCAAGAAACGGAGCCCAT+CGG | 0.613620 | 8:+70789331 | None:intergenic |
| AGATCTATGGGATGTTCAAG+AGG | 0.614406 | 8:-70790534 | MsG0880046227.01.T01:CDS |
| CACTAAGAGATATCATCTCA+AGG | 0.615021 | 8:-70788243 | MsG0880046227.01.T01:CDS |
| TTCTGCCAACATATGAATCA+CGG | 0.617203 | 8:+70789191 | None:intergenic |
| AGTGTTCCTGTGGTAGACTT+GGG | 0.619646 | 8:-70789249 | MsG0880046227.01.T01:CDS |
| CTACAATGAGAGAGATGCCA+AGG | 0.623153 | 8:-70790589 | MsG0880046227.01.T01:CDS |
| CCAGCACCCAAGTCTACCAC+AGG | 0.626540 | 8:+70789243 | None:intergenic |
| AAGTTGTCGCTGCAGATCCG+AGG | 0.626836 | 8:+70789529 | None:intergenic |
| AGTTGGATTGATAGATACAT+CGG | 0.633207 | 8:-70790017 | MsG0880046227.01.T01:CDS |
| TATTTCAGGGACATTCCGAT+GGG | 0.633257 | 8:-70789346 | MsG0880046227.01.T01:CDS |
| AAAAGTATTTCCGTTTGCTG+CGG | 0.635232 | 8:+70789575 | None:intergenic |
| CAAAATGAAGAGTGTTCCTG+TGG | 0.635403 | 8:-70789259 | MsG0880046227.01.T01:CDS |
| TGGAGTGGATGGACTCCTAG+GGG | 0.642969 | 8:+70789620 | None:intergenic |
| GTGCCTGTAATCAAAAGAGG+TGG | 0.647223 | 8:-70788802 | MsG0880046227.01.T01:CDS |
| GCTTATATTACCAACTGCCG+TGG | 0.652654 | 8:+70788777 | None:intergenic |
| GACGCCAAAACAGATCATCA+AGG | 0.655091 | 8:-70789100 | MsG0880046227.01.T01:intron |
| TGAACTTTATAAGAACACCA+AGG | 0.657415 | 8:-70789475 | MsG0880046227.01.T01:intron |
| ATAGCAGGGTTTAACAGACA+TGG | 0.671919 | 8:-70788156 | MsG0880046227.01.T01:exon |
| CTCCAAGTAGCTTCTAACGG+AGG | 0.681992 | 8:+70788414 | None:intergenic |
| AGGCTAGTACATGAACCCCA+CGG | 0.706623 | 8:-70788223 | MsG0880046227.01.T01:CDS |
| ATAATCATGATAGATTTCTG+GGG | 0.708208 | 8:+70788726 | None:intergenic |
| TGCCAACATATGAATCACGG+CGG | 0.717560 | 8:+70789194 | None:intergenic |
| AATCAAAAGAGGTGGCACCA+CGG | 0.732628 | 8:-70788794 | MsG0880046227.01.T01:CDS |
| AAATCACCAAAATAGCCGTG+GGG | 0.760400 | 8:+70788208 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAAACTGAAAAAT+AGG | + | Chr8:70787876-70787895 | None:intergenic | 10.0% |
| !!! | ATTTTTCAGTTTATTATTAT+GGG | - | Chr8:70787876-70787895 | MsG0880046227.01.T01:three_prime_UTR | 10.0% |
| !!! | TATTTTTCAGTTTATTATTA+TGG | - | Chr8:70787875-70787894 | MsG0880046227.01.T01:three_prime_UTR | 10.0% |
| !! | AAAAATATGTATTTATCTTC+AGG | - | Chr8:70790554-70790573 | MsG0880046227.01.T01:CDS | 15.0% |
| !! | ATTCTAACATTAGTTAAAAC+AGG | + | Chr8:70790636-70790655 | None:intergenic | 20.0% |
| !! | CAAAATACAAAAGAAAAATG+TGG | + | Chr8:70790788-70790807 | None:intergenic | 20.0% |
| !! | TATAATCATGATAGATTTCT+GGG | + | Chr8:70789890-70789909 | None:intergenic | 20.0% |
| !!! | ATTTTGCAAAATTTACATCA+TGG | - | Chr8:70788324-70788343 | MsG0880046227.01.T01:CDS | 20.0% |
| !!! | GTTTTAACTAATGTTAGAAT+GGG | - | Chr8:70790636-70790655 | MsG0880046227.01.T01:CDS | 20.0% |
| !!! | TGTTTTAACTAATGTTAGAA+TGG | - | Chr8:70790635-70790654 | MsG0880046227.01.T01:CDS | 20.0% |
| !!! | TTAATACATGTACTTTTTGT+TGG | - | Chr8:70788829-70788848 | MsG0880046227.01.T01:CDS | 20.0% |
| !!! | TTTTTGAAATAATTCTTCAG+AGG | - | Chr8:70790524-70790543 | MsG0880046227.01.T01:CDS | 20.0% |
| ! | AACATTTCTCAGTAAAATCA+AGG | + | Chr8:70789963-70789982 | None:intergenic | 25.0% |
| ! | ACACAAAATAACACATCAAT+TGG | + | Chr8:70788411-70788430 | None:intergenic | 25.0% |
| ! | AGAAGGATGAATTTAATACA+TGG | - | Chr8:70788853-70788872 | MsG0880046227.01.T01:CDS | 25.0% |
| ! | ATAATCATGATAGATTTCTG+GGG | + | Chr8:70789889-70789908 | None:intergenic | 25.0% |
| ! | ATGAAAATTATGTGCATGTT+TGG | - | Chr8:70788262-70788281 | MsG0880046227.01.T01:CDS | 25.0% |
| ! | CAGAAATCTATCATGATTAT+AGG | - | Chr8:70789889-70789908 | MsG0880046227.01.T01:intron | 25.0% |
| ! | CTATAATCATGATAGATTTC+TGG | + | Chr8:70789891-70789910 | None:intergenic | 25.0% |
| ! | TAATGAATTCACTTGACATT+GGG | + | Chr8:70790241-70790260 | None:intergenic | 25.0% |
| ! | TCACTTTCAGAATAAAAATG+AGG | - | Chr8:70788696-70788715 | MsG0880046227.01.T01:intron | 25.0% |
| ! | TGAATTCATTACATGCAAAA+GGG | - | Chr8:70790250-70790269 | MsG0880046227.01.T01:intron | 25.0% |
| ! | TTTCATTACTTCATACTCAT+TGG | - | Chr8:70790131-70790150 | MsG0880046227.01.T01:intron | 25.0% |
| !! | CTTTTATGTACTGTAAATTC+TGG | - | Chr8:70790660-70790679 | MsG0880046227.01.T01:five_prime_UTR | 25.0% |
| !! | TGGATTATTTCATTCTTTTC+AGG | - | Chr8:70789725-70789744 | MsG0880046227.01.T01:intron | 25.0% |
| !!! | TATTTTGGTGATTTCTTTGA+TGG | - | Chr8:70790413-70790432 | MsG0880046227.01.T01:intron | 25.0% |
| !!! | TGTGTGTGTATGTTTTTTTT+AGG | - | Chr8:70788426-70788445 | MsG0880046227.01.T01:CDS | 25.0% |
| AAGCTTACTTTACTTGAAAG+GGG | + | Chr8:70789682-70789701 | None:intergenic | 30.0% | |
| AATAAAATCAGATGCTACCT+TGG | - | Chr8:70788495-70788514 | MsG0880046227.01.T01:intron | 30.0% | |
| AATACAAACTCATTAGTAGC+TGG | + | Chr8:70789204-70789223 | None:intergenic | 30.0% | |
| ACAAGCTTACTTTACTTGAA+AGG | + | Chr8:70789684-70789703 | None:intergenic | 30.0% | |
| ACTTCAATGGTTTGAAAGTT+GGG | - | Chr8:70789452-70789471 | MsG0880046227.01.T01:intron | 30.0% | |
| AGTTGGATTGATAGATACAT+CGG | - | Chr8:70788595-70788614 | MsG0880046227.01.T01:intron | 30.0% | |
| ATATACACACTAAACTACCT+TGG | + | Chr8:70788183-70788202 | None:intergenic | 30.0% | |
| ATTATTATGGGACAATGTGT+TGG | - | Chr8:70787888-70787907 | MsG0880046227.01.T01:three_prime_UTR | 30.0% | |
| CAAGCATTAAGTTTGTCATT+AGG | + | Chr8:70788115-70788134 | None:intergenic | 30.0% | |
| CAAGCTTACTTTACTTGAAA+GGG | + | Chr8:70789683-70789702 | None:intergenic | 30.0% | |
| CTGAGAAATGTTGTCAAATA+TGG | - | Chr8:70789971-70789990 | MsG0880046227.01.T01:intron | 30.0% | |
| CTTAAATGTGTGTGCATATA+TGG | - | Chr8:70789634-70789653 | MsG0880046227.01.T01:CDS | 30.0% | |
| GAAAAAAGATATCAGCAATG+TGG | + | Chr8:70790090-70790109 | None:intergenic | 30.0% | |
| GAAAATCACTTCAATAGAAC+AGG | + | Chr8:70788910-70788929 | None:intergenic | 30.0% | |
| GTAATGAATTCACTTGACAT+TGG | + | Chr8:70790242-70790261 | None:intergenic | 30.0% | |
| GTGAATTCATTACATGCAAA+AGG | - | Chr8:70790249-70790268 | MsG0880046227.01.T01:intron | 30.0% | |
| TAAAGAGATGAGGAAAAAGA+GGG | - | Chr8:70789779-70789798 | MsG0880046227.01.T01:intron | 30.0% | |
| TATATGTATGTATGTCTGTG+TGG | - | Chr8:70788198-70788217 | MsG0880046227.01.T01:CDS | 30.0% | |
| TCAAAGTTTGACAGAACTTA+TGG | + | Chr8:70790691-70790710 | None:intergenic | 30.0% | |
| TCATCTCTTTAAATGCTTGA+AGG | + | Chr8:70789770-70789789 | None:intergenic | 30.0% | |
| TGAACTTTATAAGAACACCA+AGG | - | Chr8:70789137-70789156 | MsG0880046227.01.T01:CDS | 30.0% | |
| TGACAAAGAGCAAATTCATA+GGG | - | Chr8:70790304-70790323 | MsG0880046227.01.T01:intron | 30.0% | |
| TTAAAGAGATGAGGAAAAAG+AGG | - | Chr8:70789778-70789797 | MsG0880046227.01.T01:intron | 30.0% | |
| TTATTATGGGACAATGTGTT+GGG | - | Chr8:70787889-70787908 | MsG0880046227.01.T01:three_prime_UTR | 30.0% | |
| TTCAAGCATTTAAAGAGATG+AGG | - | Chr8:70789769-70789788 | MsG0880046227.01.T01:intron | 30.0% | |
| TTGACAAAGAGCAAATTCAT+AGG | - | Chr8:70790303-70790322 | MsG0880046227.01.T01:intron | 30.0% | |
| TTGCAAAATTTACATCATGG+TGG | - | Chr8:70788327-70788346 | MsG0880046227.01.T01:CDS | 30.0% | |
| TTGCAAGTTTCAGATTCATA+TGG | + | Chr8:70788735-70788754 | None:intergenic | 30.0% | |
| ! | ACATGCACATAATTTTCATC+TGG | + | Chr8:70788261-70788280 | None:intergenic | 30.0% |
| ! | AGCTAATGTGATAATGTTGT+TGG | - | Chr8:70788953-70788972 | MsG0880046227.01.T01:intron | 30.0% |
| ! | ATCACAATTTAAAACCTCTG+TGG | + | Chr8:70789922-70789941 | None:intergenic | 30.0% |
| ! | CATGCACATAATTTTCATCT+GGG | + | Chr8:70788260-70788279 | None:intergenic | 30.0% |
| ! | CTAGACACAGTTCTAATAAA+AGG | + | Chr8:70790066-70790085 | None:intergenic | 30.0% |
| !! | ATGTACTTTTTGTTGGTAGA+AGG | - | Chr8:70788836-70788855 | MsG0880046227.01.T01:CDS | 30.0% |
| !!! | TCATTCTTTTCAGGTTTATG+AGG | - | Chr8:70789734-70789753 | MsG0880046227.01.T01:intron | 30.0% |
| AAACAGGTTCGAGATATTTC+AGG | - | Chr8:70789252-70789271 | MsG0880046227.01.T01:CDS | 35.0% | |
| AACAGGTTCGAGATATTTCA+GGG | - | Chr8:70789253-70789272 | MsG0880046227.01.T01:CDS | 35.0% | |
| AATTCATAGGGTCTATGTTG+TGG | - | Chr8:70790316-70790335 | MsG0880046227.01.T01:intron | 35.0% | |
| ACACACATTTAAGAAACGCA+GGG | + | Chr8:70789627-70789646 | None:intergenic | 35.0% | |
| ACTTTCAAACCATTGAAGTC+CGG | + | Chr8:70789451-70789470 | None:intergenic | 35.0% | |
| CACTAAGAGATATCATCTCA+AGG | - | Chr8:70790369-70790388 | MsG0880046227.01.T01:intron | 35.0% | |
| CTCAGTAAAATCAAGGATTG+TGG | + | Chr8:70789956-70789975 | None:intergenic | 35.0% | |
| CTTCAATGGTTTGAAAGTTG+GGG | - | Chr8:70789453-70789472 | MsG0880046227.01.T01:intron | 35.0% | |
| GAATAACTTAGGTGTAGTGT+AGG | - | Chr8:70787815-70787834 | MsG0880046227.01.T01:three_prime_UTR | 35.0% | |
| GACTTCAATGGTTTGAAAGT+TGG | - | Chr8:70789451-70789470 | MsG0880046227.01.T01:intron | 35.0% | |
| GAGAAAAGAAGAGGGAATAA+TGG | - | Chr8:70787994-70788013 | MsG0880046227.01.T01:three_prime_UTR | 35.0% | |
| GATCTTGATGAACTTGACAA+TGG | - | Chr8:70789705-70789724 | MsG0880046227.01.T01:intron | 35.0% | |
| GATGAGAGTTGAAGATCTAT+GGG | - | Chr8:70788066-70788085 | MsG0880046227.01.T01:three_prime_UTR | 35.0% | |
| GTTCACCTTATTATGACTAG+CGG | - | Chr8:70790742-70790761 | MsG0880046227.01.T01:five_prime_UTR | 35.0% | |
| TAGACATTGCAAAACAACCT+TGG | + | Chr8:70789157-70789176 | None:intergenic | 35.0% | |
| TCACAGAACAATTACAGTGA+AGG | - | Chr8:70790166-70790185 | MsG0880046227.01.T01:intron | 35.0% | |
| TCATTCCGCTAGTCATAATA+AGG | + | Chr8:70790750-70790769 | None:intergenic | 35.0% | |
| TCTTTAAATGCTTGAAGGAC+TGG | + | Chr8:70789765-70789784 | None:intergenic | 35.0% | |
| TGCAGAATTCATACTTGACA+AGG | + | Chr8:70789574-70789593 | None:intergenic | 35.0% | |
| TTCTGCCAACATATGAATCA+CGG | + | Chr8:70789424-70789443 | None:intergenic | 35.0% | |
| ! | TGTTGTATGGATTTTGCATC+AGG | - | Chr8:70788639-70788658 | MsG0880046227.01.T01:intron | 35.0% |
| ! | TTAGTGTGATTAGTCCTTCA+AGG | + | Chr8:70790355-70790374 | None:intergenic | 35.0% |
| !! | AAAAGTATTTCCGTTTGCTG+CGG | + | Chr8:70789040-70789059 | None:intergenic | 35.0% |
| !! | AGTTTGCTGGAATTGTTGTA+TGG | - | Chr8:70788626-70788645 | MsG0880046227.01.T01:intron | 35.0% |
| !! | TGATTGGTTTGTCAGAATCA+TGG | + | Chr8:70788357-70788376 | None:intergenic | 35.0% |
| !!! | AACTTCTGGAAACTTTTTCG+AGG | - | Chr8:70789101-70789120 | MsG0880046227.01.T01:CDS | 35.0% |
| !!! | TAGCTAACTTTTTCGCAAAC+AGG | - | Chr8:70789236-70789255 | MsG0880046227.01.T01:CDS | 35.0% |
| AAATCACCAAAATAGCCGTG+GGG | + | Chr8:70790407-70790426 | None:intergenic | 40.0% | |
| ACACAGAGAGAGAAAAGAAG+AGG | - | Chr8:70787985-70788004 | MsG0880046227.01.T01:three_prime_UTR | 40.0% | |
| ACCAACATCAGATAGTTCCT+TGG | + | Chr8:70789481-70789500 | None:intergenic | 40.0% | |
| ACCAAGGAACTATCTGATGT+TGG | - | Chr8:70789477-70789496 | MsG0880046227.01.T01:CDS | 40.0% | |
| AGAAATCACCAAAATAGCCG+TGG | + | Chr8:70790409-70790428 | None:intergenic | 40.0% | |
| AGAAGAGGGAATAATGGCAA+TGG | - | Chr8:70788000-70788019 | MsG0880046227.01.T01:three_prime_UTR | 40.0% | |
| AGATCTATGGGATGTTCAAG+AGG | - | Chr8:70788078-70788097 | MsG0880046227.01.T01:three_prime_UTR | 40.0% | |
| ATAGCAGGGTTTAACAGACA+TGG | - | Chr8:70790456-70790475 | MsG0880046227.01.T01:CDS | 40.0% | |
| ATATTTCAGGGACATTCCGA+TGG | - | Chr8:70789265-70789284 | MsG0880046227.01.T01:CDS | 40.0% | |
| ATCGGAATAGTTGAGTTTGC+TGG | - | Chr8:70788613-70788632 | MsG0880046227.01.T01:intron | 40.0% | |
| CACACACATTTAAGAAACGC+AGG | + | Chr8:70789628-70789647 | None:intergenic | 40.0% | |
| CACAGAGAGAGAAAAGAAGA+GGG | - | Chr8:70787986-70788005 | MsG0880046227.01.T01:three_prime_UTR | 40.0% | |
| CTTCTCCAAGTAGCTTCTAA+CGG | + | Chr8:70790204-70790223 | None:intergenic | 40.0% | |
| GAAATCACCAAAATAGCCGT+GGG | + | Chr8:70790408-70790427 | None:intergenic | 40.0% | |
| GACAAGGTTCAATGCAATGA+GGG | + | Chr8:70789558-70789577 | None:intergenic | 40.0% | |
| GATCTCTCCAAAGCAAGAAA+CGG | + | Chr8:70789294-70789313 | None:intergenic | 40.0% | |
| GGATGAGAGTTGAAGATCTA+TGG | - | Chr8:70788065-70788084 | MsG0880046227.01.T01:three_prime_UTR | 40.0% | |
| GGCTGAAGCTGTGAAAATAT+TGG | - | Chr8:70788516-70788535 | MsG0880046227.01.T01:intron | 40.0% | |
| GTCACATACACATGCATGTT+TGG | + | Chr8:70788389-70788408 | None:intergenic | 40.0% | |
| GTTGTCAAATATGGCTGATG+CGG | - | Chr8:70789980-70789999 | MsG0880046227.01.T01:CDS | 40.0% | |
| TATTTCAGGGACATTCCGAT+GGG | - | Chr8:70789266-70789285 | MsG0880046227.01.T01:CDS | 40.0% | |
| TCAATCCAACTAGCATCTTC+AGG | + | Chr8:70788586-70788605 | None:intergenic | 40.0% | |
| TCTATGTTGTGGACGATGAT+GGG | - | Chr8:70790327-70790346 | MsG0880046227.01.T01:intron | 40.0% | |
| TCTGACAAACCAATCAACTG+TGG | - | Chr8:70788361-70788380 | MsG0880046227.01.T01:CDS | 40.0% | |
| TGACAAGGTTCAATGCAATG+AGG | + | Chr8:70789559-70789578 | None:intergenic | 40.0% | |
| TGTTAAACCCTGCTATTAGC+AGG | + | Chr8:70790452-70790471 | None:intergenic | 40.0% | |
| TGTTTGGTACCACAGTTGAT+TGG | + | Chr8:70788373-70788392 | None:intergenic | 40.0% | |
| TTATAGGTATGTCACCACAG+AGG | - | Chr8:70789905-70789924 | MsG0880046227.01.T01:intron | 40.0% | |
| TTCAACTCTCATCCCAAGTT+TGG | + | Chr8:70788059-70788078 | None:intergenic | 40.0% | |
| ! | AAACTACCTTGGTTTGAAGC+AGG | + | Chr8:70788172-70788191 | None:intergenic | 40.0% |
| ! | CAGGTTGAAGATGTGTATCT+AGG | - | Chr8:70790573-70790592 | MsG0880046227.01.T01:CDS | 40.0% |
| ! | TATTTTCACAGCTTCAGCCA+AGG | + | Chr8:70788515-70788534 | None:intergenic | 40.0% |
| !! | CAAAATGAAGAGTGTTCCTG+TGG | - | Chr8:70789353-70789372 | MsG0880046227.01.T01:CDS | 40.0% |
| !! | CACACCTTGATGATCTGTTT+TGG | + | Chr8:70789519-70789538 | None:intergenic | 40.0% |
| AATCAAAAGAGGTGGCACCA+CGG | - | Chr8:70789818-70789837 | MsG0880046227.01.T01:intron | 45.0% | |
| AGTGTTCCTGTGGTAGACTT+GGG | - | Chr8:70789363-70789382 | MsG0880046227.01.T01:intron | 45.0% | |
| ATGAGGAAAAAGAGGGTTGG+AGG | - | Chr8:70789786-70789805 | MsG0880046227.01.T01:intron | 45.0% | |
| ATGCACCTGAAGATGCTAGT+TGG | - | Chr8:70788578-70788597 | MsG0880046227.01.T01:intron | 45.0% | |
| CATATGTTGGCAGAATGTGC+CGG | - | Chr8:70789429-70789448 | MsG0880046227.01.T01:intron | 45.0% | |
| CTACAATGAGAGAGATGCCA+AGG | - | Chr8:70788023-70788042 | MsG0880046227.01.T01:three_prime_UTR | 45.0% | |
| CTTAGAAAGCAGCAAGAGCA+TGG | + | Chr8:70789331-70789350 | None:intergenic | 45.0% | |
| GACGCCAAAACAGATCATCA+AGG | - | Chr8:70789512-70789531 | MsG0880046227.01.T01:CDS | 45.0% | |
| GAGATGAGGAAAAAGAGGGT+TGG | - | Chr8:70789783-70789802 | MsG0880046227.01.T01:intron | 45.0% | |
| GATGTCTTTGACCGTGATTG+AGG | + | Chr8:70790006-70790025 | None:intergenic | 45.0% | |
| GCTTATATTACCAACTGCCG+TGG | + | Chr8:70789838-70789857 | None:intergenic | 45.0% | |
| GGCAAAGGAAAAGCAGAAAC+AGG | + | Chr8:70788151-70788170 | None:intergenic | 45.0% | |
| GTCTATGTTGTGGACGATGA+TGG | - | Chr8:70790326-70790345 | MsG0880046227.01.T01:intron | 45.0% | |
| GTGCCTGTAATCAAAAGAGG+TGG | - | Chr8:70789810-70789829 | MsG0880046227.01.T01:intron | 45.0% | |
| GTTTGAAAGTTGGGGAACCA+AGG | - | Chr8:70789461-70789480 | MsG0880046227.01.T01:intron | 45.0% | |
| TATTCTGAGTGCACCTGTTG+TGG | - | Chr8:70788549-70788568 | MsG0880046227.01.T01:intron | 45.0% | |
| TGAGGAAAAAGAGGGTTGGA+GGG | - | Chr8:70789787-70789806 | MsG0880046227.01.T01:intron | 45.0% | |
| TGCCAACATATGAATCACGG+CGG | + | Chr8:70789421-70789440 | None:intergenic | 45.0% | |
| !! | GTGCCACCTCTTTTGATTAC+AGG | + | Chr8:70789816-70789835 | None:intergenic | 45.0% |
| !!! | ATCTGTTTTGGCGTCACAAG+GGG | + | Chr8:70789507-70789526 | None:intergenic | 45.0% |
| !!! | GATCTGTTTTGGCGTCACAA+GGG | + | Chr8:70789508-70789527 | None:intergenic | 45.0% |
| !!! | TGATCTGTTTTGGCGTCACA+AGG | + | Chr8:70789509-70789528 | None:intergenic | 45.0% |
| AAGCAAGAAACGGAGCCCAT+CGG | + | Chr8:70789284-70789303 | None:intergenic | 50.0% | |
| AAGGTCCGCATCCACAATTC+AGG | + | Chr8:70790047-70790066 | None:intergenic | 50.0% | |
| ACAATTCAGGTCGTGACGCA+AGG | + | Chr8:70790034-70790053 | None:intergenic | 50.0% | |
| ACCCGCCGTGATTCATATGT+TGG | - | Chr8:70789416-70789435 | MsG0880046227.01.T01:intron | 50.0% | |
| ACCCTGCTATTAGCAGGTAG+AGG | + | Chr8:70790446-70790465 | None:intergenic | 50.0% | |
| AGGAGTCCAGAAGCCAAACT+TGG | - | Chr8:70788043-70788062 | MsG0880046227.01.T01:three_prime_UTR | 50.0% | |
| AGGCTAGTACATGAACCCCA+CGG | - | Chr8:70790389-70790408 | MsG0880046227.01.T01:intron | 50.0% | |
| AGTAGCTTCTAACGGAGGTC+AGG | + | Chr8:70790196-70790215 | None:intergenic | 50.0% | |
| ATGGGCTCCGTTTCTTGCTT+TGG | - | Chr8:70789284-70789303 | MsG0880046227.01.T01:CDS | 50.0% | |
| CACGACCTGAATTGTGGATG+CGG | - | Chr8:70790039-70790058 | MsG0880046227.01.T01:CDS | 50.0% | |
| CAGAATGTGCCGGACTTCAA+TGG | - | Chr8:70789439-70789458 | MsG0880046227.01.T01:intron | 50.0% | |
| CCCTCTACCTGCTAATAGCA+GGG | - | Chr8:70790442-70790461 | MsG0880046227.01.T01:intron | 50.0% | |
| CCCTGCTATTAGCAGGTAGA+GGG | + | Chr8:70790445-70790464 | None:intergenic | 50.0% | |
| CCTTTGCCTGCTTCAAACCA+AGG | - | Chr8:70788163-70788182 | MsG0880046227.01.T01:exon | 50.0% | |
| CTCCAAGTAGCTTCTAACGG+AGG | + | Chr8:70790201-70790220 | None:intergenic | 50.0% | |
| GACCTCCGTTAGAAGCTACT+TGG | - | Chr8:70790196-70790215 | MsG0880046227.01.T01:intron | 50.0% | |
| GAGGAAAAAGAGGGTTGGAG+GGG | - | Chr8:70789788-70789807 | MsG0880046227.01.T01:intron | 50.0% | |
| GAGTGTTCCTGTGGTAGACT+TGG | - | Chr8:70789362-70789381 | MsG0880046227.01.T01:intron | 50.0% | |
| GCCAACATATGAATCACGGC+GGG | + | Chr8:70789420-70789439 | None:intergenic | 50.0% | |
| GGAGTCCAGAAGCCAAACTT+GGG | - | Chr8:70788044-70788063 | MsG0880046227.01.T01:three_prime_UTR | 50.0% | |
| GGTGCATCAACATCCACAAC+AGG | + | Chr8:70788565-70788584 | None:intergenic | 50.0% | |
| TCCCTCTACCTGCTAATAGC+AGG | - | Chr8:70790441-70790460 | MsG0880046227.01.T01:intron | 50.0% | |
| TTGCGTCACGACCTGAATTG+TGG | - | Chr8:70790033-70790052 | MsG0880046227.01.T01:CDS | 50.0% | |
| ! | AGTTTGGCTTCTGGACTCCT+TGG | + | Chr8:70788043-70788062 | None:intergenic | 50.0% |
| ! | CATGAACCCCACGGCTATTT+TGG | - | Chr8:70790398-70790417 | MsG0880046227.01.T01:intron | 50.0% |
| ! | CCTTGGTTTGAAGCAGGCAA+AGG | + | Chr8:70788166-70788185 | None:intergenic | 50.0% |
| ! | CTCATCCCAAGTTTGGCTTC+TGG | + | Chr8:70788052-70788071 | None:intergenic | 50.0% |
| ! | GCAATAGCACTTGCACTGGT+TGG | + | Chr8:70789015-70789034 | None:intergenic | 50.0% |
| ! | GGGGTGCCTGTAATCAAAAG+AGG | - | Chr8:70789807-70789826 | MsG0880046227.01.T01:intron | 50.0% |
| ! | TTGGAGTGGATGGACTCCTA+GGG | + | Chr8:70788996-70789015 | None:intergenic | 50.0% |
| !! | GACGATGATGGGAACCTTGA+AGG | - | Chr8:70790338-70790357 | MsG0880046227.01.T01:intron | 50.0% |
| AAGTTGTCGCTGCAGATCCG+AGG | + | Chr8:70789086-70789105 | None:intergenic | 55.0% | |
| AGTCTGAACCTCCATCCCCT+AGG | - | Chr8:70788977-70788996 | MsG0880046227.01.T01:intron | 55.0% | |
| GAACTCGAAGCCTTAGGCCT+CGG | - | Chr8:70789066-70789085 | MsG0880046227.01.T01:intron | 55.0% | |
| GCTATTGCAGCCGCAGCAAA+CGG | - | Chr8:70789027-70789046 | MsG0880046227.01.T01:intron | 55.0% | |
| GCTCGAGAACTCGAAGCCTT+AGG | - | Chr8:70789060-70789079 | MsG0880046227.01.T01:intron | 55.0% | |
| GGATCTGCAGCGACAACTTC+TGG | - | Chr8:70789087-70789106 | MsG0880046227.01.T01:intron | 55.0% | |
| GGCTGCAATAGCACTTGCAC+TGG | + | Chr8:70789019-70789038 | None:intergenic | 55.0% | |
| ! | GTTGGAGTGGATGGACTCCT+AGG | + | Chr8:70788997-70789016 | None:intergenic | 55.0% |
| ! | TGGAGTGGATGGACTCCTAG+GGG | + | Chr8:70788995-70789014 | None:intergenic | 55.0% |
| !! | AGCACTTGCACTGGTTGGAG+TGG | + | Chr8:70789010-70789029 | None:intergenic | 55.0% |
| !! | CTTGCACTGGTTGGAGTGGA+TGG | + | Chr8:70789006-70789025 | None:intergenic | 55.0% |
| CCAGCACCCAAGTCTACCAC+AGG | + | Chr8:70789372-70789391 | None:intergenic | 60.0% | |
| CCTGTGGTAGACTTGGGTGC+TGG | - | Chr8:70789369-70789388 | MsG0880046227.01.T01:intron | 60.0% | |
| GGCTGATGCGGCCTCAATCA+CGG | - | Chr8:70789992-70790011 | MsG0880046227.01.T01:CDS | 60.0% | |
| ! | GATGGACTCCTAGGGGATGG+AGG | + | Chr8:70788988-70789007 | None:intergenic | 60.0% |
| ! | GTGGATGGACTCCTAGGGGA+TGG | + | Chr8:70788991-70789010 | None:intergenic | 60.0% |
| AGAGGTGGCACCACGGCAGT+TGG | - | Chr8:70789825-70789844 | MsG0880046227.01.T01:intron | 65.0% | |
| CGCTGCAGATCCGAGGCCTA+AGG | + | Chr8:70789079-70789098 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 70787815 | 70790819 | 70787815 | ID=MsG0880046227.01;Name=MsG0880046227.01 |
| Chr8 | mRNA | 70787815 | 70790819 | 70787815 | ID=MsG0880046227.01.T01;Parent=MsG0880046227.01;Name=MsG0880046227.01.T01;_AED=0.22;_eAED=0.22;_QI=162|1|1|1|1|1|6|350|432 |
| Chr8 | exon | 70787815 | 70788462 | 70787815 | ID=MsG0880046227.01.T01:exon:15233;Parent=MsG0880046227.01.T01 |
| Chr8 | exon | 70788724 | 70788887 | 70788724 | ID=MsG0880046227.01.T01:exon:15232;Parent=MsG0880046227.01.T01 |
| Chr8 | exon | 70789101 | 70789376 | 70789101 | ID=MsG0880046227.01.T01:exon:15231;Parent=MsG0880046227.01.T01 |
| Chr8 | exon | 70789476 | 70789655 | 70789476 | ID=MsG0880046227.01.T01:exon:15230;Parent=MsG0880046227.01.T01 |
| Chr8 | exon | 70789974 | 70790146 | 70789974 | ID=MsG0880046227.01.T01:exon:15229;Parent=MsG0880046227.01.T01 |
| Chr8 | exon | 70790450 | 70790819 | 70790450 | ID=MsG0880046227.01.T01:exon:15228;Parent=MsG0880046227.01.T01 |
| Chr8 | five_prime_UTR | 70790658 | 70790819 | 70790658 | ID=MsG0880046227.01.T01:five_prime_utr;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70790450 | 70790657 | 70790450 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70789974 | 70790146 | 70789974 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70789476 | 70789655 | 70789476 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70789101 | 70789376 | 70789101 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70788724 | 70788887 | 70788724 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | CDS | 70788165 | 70788462 | 70788165 | ID=MsG0880046227.01.T01:cds;Parent=MsG0880046227.01.T01 |
| Chr8 | three_prime_UTR | 70787815 | 70788164 | 70787815 | ID=MsG0880046227.01.T01:three_prime_utr;Parent=MsG0880046227.01.T01 |
| Gene Sequence |
| Protein sequence |
