Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265250 | XP_003597562.1 | 99.758 | 413 | 1 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265250 | sp|Q40465|IF411_TOBAC | 93.947 | 413 | 25 | 0 | 1 | 413 | 1 | 413 | 0.0 | 802 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265250 | G7IS33 | 99.758 | 413 | 1 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016710 | Msa0265250 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
| Msa0021290 | Msa0265250 | 0.800381 | 1.480175e-48 | -8.615850e-47 |
| Msa0021320 | Msa0265250 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0032780 | Msa0265250 | 0.827988 | 1.153787e-54 | -8.615850e-47 |
| Msa0037180 | Msa0265250 | 0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0040220 | Msa0265250 | 0.802750 | 4.837189e-49 | -8.615850e-47 |
| Msa0042480 | Msa0265250 | 0.801319 | 9.521858e-49 | -8.615850e-47 |
| Msa0044010 | Msa0265250 | 0.831106 | 2.014934e-55 | -8.615850e-47 |
| Msa0072570 | Msa0265250 | 0.806348 | 8.591427e-50 | -8.615850e-47 |
| Msa0092220 | Msa0265250 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa0110400 | Msa0265250 | 0.814571 | 1.439397e-51 | -8.615850e-47 |
| Msa0114570 | Msa0265250 | 0.836368 | 9.751776e-57 | -8.615850e-47 |
| Msa0138890 | Msa0265250 | 0.812531 | 4.045481e-51 | -8.615850e-47 |
| Msa0172900 | Msa0265250 | 0.800380 | 1.481050e-48 | -8.615850e-47 |
| Msa0172930 | Msa0265250 | 0.857577 | 1.484865e-62 | -8.615850e-47 |
| Msa0192050 | Msa0265250 | 0.836535 | 8.840004e-57 | -8.615850e-47 |
| Msa0209140 | Msa0265250 | 0.802539 | 5.347505e-49 | -8.615850e-47 |
| Msa0220990 | Msa0265250 | 0.809519 | 1.817808e-50 | -8.615850e-47 |
| Msa0224110 | Msa0265250 | 0.941774 | 2.313199e-101 | -8.615850e-47 |
| Msa0230490 | Msa0265250 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa0251920 | Msa0265250 | 0.801747 | 7.781582e-49 | -8.615850e-47 |
| Msa0262440 | Msa0265250 | 0.803714 | 3.054868e-49 | -8.615850e-47 |
| Msa0265250 | Msa0297830 | 0.818211 | 2.206149e-52 | -8.615850e-47 |
| Msa0265250 | Msa0335840 | 0.821179 | 4.634175e-53 | -8.615850e-47 |
| Msa0265250 | Msa0422980 | 0.808466 | 3.055407e-50 | -8.615850e-47 |
| Msa0265250 | Msa0426090 | 0.819420 | 1.172225e-52 | -8.615850e-47 |
| Msa0265250 | Msa0430130 | 0.871389 | 7.092294e-67 | -8.615850e-47 |
| Msa0265250 | Msa0430230 | 0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0265250 | Msa0468660 | 0.806196 | 9.250612e-50 | -8.615850e-47 |
| Msa0265250 | Msa0472480 | 0.820272 | 7.488477e-53 | -8.615850e-47 |
| Msa0265250 | Msa0474570 | 0.878183 | 3.451442e-69 | -8.615850e-47 |
| Msa0265250 | Msa0475810 | 0.824627 | 7.285906e-54 | -8.615850e-47 |
| Msa0265250 | Msa0579080 | 0.820517 | 6.577522e-53 | -8.615850e-47 |
| Msa0265250 | Msa0582960 | 0.833088 | 6.518964e-56 | -8.615850e-47 |
| Msa0265250 | Msa0584030 | 0.809477 | 1.856125e-50 | -8.615850e-47 |
| Msa0265250 | Msa0656320 | 0.807021 | 6.196065e-50 | -8.615850e-47 |
| Msa0265250 | Msa0660150 | 0.840132 | 1.045423e-57 | -8.615850e-47 |
| Msa0265250 | Msa0700120 | 0.829116 | 6.163699e-55 | -8.615850e-47 |
| Msa0265250 | Msa0705800 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa0265250 | Msa0707370 | 0.812769 | 3.588350e-51 | -8.615850e-47 |
| Msa0265250 | Msa0717380 | 0.823519 | 1.326276e-53 | -8.615850e-47 |
| Msa0265250 | Msa0741520 | 0.800496 | 1.402703e-48 | -8.615850e-47 |
| Msa0265250 | Msa0759230 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0265250 | Msa0781080 | 0.814896 | 1.219537e-51 | -8.615850e-47 |
| Msa0265250 | Msa0781310 | 0.831968 | 1.235281e-55 | -8.615850e-47 |
| Msa0265250 | Msa0799830 | 0.811729 | 6.052537e-51 | -8.615850e-47 |
| Msa0265250 | Msa0860860 | 0.852393 | 4.754905e-61 | -8.615850e-47 |
| Msa0265250 | Msa0861320 | 0.817385 | 3.389390e-52 | -8.615850e-47 |
| Msa0265250 | Msa1014550 | -0.825497 | 4.539938e-54 | -8.615850e-47 |
| Msa0265250 | Msa1040160 | 0.829190 | 5.913192e-55 | -8.615850e-47 |
| Msa0265250 | Msa1041680 | 0.810600 | 1.063239e-50 | -8.615850e-47 |
| Msa0265250 | Msa1055520 | -0.829299 | 5.563198e-55 | -8.615850e-47 |
| Msa0265250 | Msa1058700 | 0.802442 | 5.600561e-49 | -8.615850e-47 |
| Msa0265250 | Msa1078890 | 0.836638 | 8.320406e-57 | -8.615850e-47 |
| Msa0265250 | Msa1078980 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0265250 | Msa1082170 | 0.824031 | 1.005869e-53 | -8.615850e-47 |
| Msa0265250 | Msa1083370 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa0265250 | Msa1089220 | 0.996165 | 3.618317e-224 | -8.615850e-47 |
| Msa0265250 | Msa1091290 | 0.829281 | 5.621087e-55 | -8.615850e-47 |
| Msa0265250 | Msa1166570 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0265250 | Msa1195290 | 0.819444 | 1.157591e-52 | -8.615850e-47 |
| Msa0265250 | Msa1202470 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa0265250 | Msa1213470 | -0.816122 | 6.507795e-52 | -8.615850e-47 |
| Msa0265250 | Msa1218170 | 0.828187 | 1.033241e-54 | -8.615850e-47 |
| Msa0265250 | Msa1233420 | 0.821325 | 4.288280e-53 | -8.615850e-47 |
| Msa0265250 | Msa1235610 | 0.808753 | 2.653012e-50 | -8.615850e-47 |
| Msa0265250 | Msa1249600 | 0.809284 | 2.041506e-50 | -8.615850e-47 |
| Msa0265250 | Msa1254910 | 0.816545 | 5.233222e-52 | -8.615850e-47 |
| Msa0265250 | Msa1300370 | -0.815583 | 8.583522e-52 | -8.615850e-47 |
| Msa0265250 | Msa1331300 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa0265250 | Msa1332250 | 0.847680 | 9.921225e-60 | -8.615850e-47 |
| Msa0265250 | Msa1364110 | 0.956826 | 1.177075e-114 | -8.615850e-47 |
| Msa0265250 | Msa1380040 | 0.816259 | 6.063885e-52 | -8.615850e-47 |
| Msa0265250 | Msa1384410 | -0.802171 | 6.367733e-49 | -8.615850e-47 |
| Msa0265250 | Msa1402010 | 0.805453 | 1.325283e-49 | -8.615850e-47 |
| Msa0265250 | Msa1418770 | 0.830376 | 3.040449e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265250 | MtrunA17_Chr2g0329931 | 99.758 | 413 | 1 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Msa0265250 | MtrunA17_Chr8g0342861 | 94.189 | 413 | 24 | 0 | 1 | 413 | 1 | 413 | 0.0 | 808 |
| Msa0265250 | MtrunA17_Chr2g0299681 | 92.978 | 413 | 29 | 0 | 1 | 413 | 1 | 413 | 0.0 | 800 |
| Msa0265250 | MtrunA17_Chr4g0070981 | 91.525 | 413 | 35 | 0 | 1 | 413 | 1 | 413 | 0.0 | 781 |
| Msa0265250 | MtrunA17_Chr2g0297261 | 64.611 | 373 | 132 | 0 | 41 | 413 | 34 | 406 | 0.0 | 517 |
| Msa0265250 | MtrunA17_Chr1g0169331 | 61.168 | 394 | 116 | 5 | 56 | 413 | 6 | 398 | 3.37e-164 | 467 |
| Msa0265250 | MtrunA17_Chr8g0342851 | 63.584 | 346 | 94 | 4 | 71 | 413 | 3 | 319 | 8.18e-145 | 414 |
| Msa0265250 | MtrunA17_Chr7g0247181 | 40.984 | 366 | 212 | 4 | 42 | 406 | 141 | 503 | 7.04e-89 | 278 |
| Msa0265250 | MtrunA17_Chr7g0247191 | 41.257 | 366 | 211 | 4 | 42 | 406 | 151 | 513 | 8.71e-89 | 278 |
| Msa0265250 | MtrunA17_Chr7g0247221 | 40.984 | 366 | 212 | 4 | 42 | 406 | 144 | 506 | 1.05e-88 | 278 |
| Msa0265250 | MtrunA17_Chr4g0003441 | 39.370 | 381 | 224 | 7 | 35 | 409 | 101 | 480 | 2.20e-76 | 245 |
| Msa0265250 | MtrunA17_Chr1g0149251 | 39.169 | 337 | 199 | 6 | 78 | 409 | 1 | 336 | 4.83e-71 | 227 |
| Msa0265250 | MtrunA17_Chr3g0107851 | 35.467 | 375 | 220 | 5 | 40 | 396 | 116 | 486 | 1.53e-67 | 224 |
| Msa0265250 | MtrunA17_Chr1g0179761 | 36.341 | 399 | 214 | 13 | 41 | 405 | 80 | 472 | 1.33e-65 | 217 |
| Msa0265250 | MtrunA17_Chr2g0330401 | 35.068 | 365 | 223 | 3 | 40 | 394 | 95 | 455 | 4.76e-65 | 216 |
| Msa0265250 | MtrunA17_Chr7g0271121 | 38.596 | 342 | 195 | 7 | 66 | 396 | 131 | 468 | 1.59e-62 | 214 |
| Msa0265250 | MtrunA17_Chr4g0076491 | 34.301 | 379 | 217 | 7 | 47 | 397 | 293 | 667 | 3.54e-62 | 213 |
| Msa0265250 | MtrunA17_Chr7g0270131 | 34.530 | 362 | 230 | 4 | 40 | 394 | 231 | 592 | 5.24e-62 | 213 |
| Msa0265250 | MtrunA17_Chr6g0449741 | 34.748 | 377 | 216 | 7 | 47 | 397 | 255 | 627 | 1.35e-61 | 210 |
| Msa0265250 | MtrunA17_Chr3g0095031 | 34.865 | 370 | 230 | 5 | 45 | 406 | 94 | 460 | 4.57e-61 | 207 |
| Msa0265250 | MtrunA17_Chr6g0483491 | 33.065 | 372 | 245 | 3 | 40 | 408 | 9 | 379 | 6.54e-60 | 201 |
| Msa0265250 | MtrunA17_Chr3g0121351 | 34.190 | 389 | 233 | 7 | 41 | 407 | 145 | 532 | 9.96e-60 | 204 |
| Msa0265250 | MtrunA17_Chr7g0236841 | 33.065 | 372 | 245 | 3 | 40 | 408 | 9 | 379 | 1.47e-59 | 200 |
| Msa0265250 | MtrunA17_Chr5g0442191 | 34.043 | 376 | 235 | 6 | 45 | 411 | 85 | 456 | 3.61e-59 | 202 |
| Msa0265250 | MtrunA17_Chr1g0193491 | 33.508 | 382 | 235 | 9 | 45 | 412 | 118 | 494 | 3.56e-58 | 201 |
| Msa0265250 | MtrunA17_Chr2g0277821 | 34.286 | 385 | 237 | 6 | 40 | 412 | 503 | 883 | 9.27e-57 | 201 |
| Msa0265250 | MtrunA17_Chr4g0040761 | 32.976 | 373 | 240 | 5 | 42 | 407 | 20 | 389 | 1.73e-56 | 198 |
| Msa0265250 | MtrunA17_Chr2g0293631 | 33.978 | 362 | 232 | 4 | 41 | 396 | 496 | 856 | 5.73e-56 | 199 |
| Msa0265250 | MtrunA17_Chr2g0310581 | 34.167 | 360 | 232 | 2 | 41 | 395 | 53 | 412 | 1.01e-55 | 191 |
| Msa0265250 | MtrunA17_Chr4g0063551 | 33.418 | 392 | 232 | 7 | 42 | 407 | 141 | 529 | 3.24e-55 | 193 |
| Msa0265250 | MtrunA17_Chr1g0176041 | 33.165 | 395 | 230 | 9 | 40 | 407 | 153 | 540 | 6.45e-55 | 191 |
| Msa0265250 | MtrunA17_Chr1g0157691 | 30.513 | 390 | 252 | 8 | 40 | 413 | 146 | 532 | 6.99e-54 | 188 |
| Msa0265250 | MtrunA17_Chr1g0200181 | 30.513 | 390 | 252 | 8 | 40 | 413 | 144 | 530 | 3.72e-53 | 186 |
| Msa0265250 | MtrunA17_Chr6g0449911 | 31.316 | 380 | 250 | 5 | 41 | 412 | 165 | 541 | 6.06e-52 | 185 |
| Msa0265250 | MtrunA17_Chr3g0098121 | 32.812 | 384 | 239 | 7 | 27 | 396 | 135 | 513 | 4.71e-51 | 183 |
| Msa0265250 | MtrunA17_Chr5g0409981 | 33.803 | 355 | 221 | 5 | 42 | 384 | 105 | 457 | 1.46e-50 | 178 |
| Msa0265250 | MtrunA17_Chr6g0461751 | 31.978 | 369 | 229 | 7 | 41 | 394 | 140 | 501 | 5.07e-48 | 171 |
| Msa0265250 | MtrunA17_Chr2g0300291 | 31.593 | 383 | 246 | 7 | 27 | 396 | 124 | 503 | 2.04e-46 | 170 |
| Msa0265250 | MtrunA17_Chr2g0307471 | 31.522 | 368 | 229 | 12 | 40 | 391 | 90 | 450 | 3.79e-43 | 158 |
| Msa0265250 | MtrunA17_Chr7g0263771 | 28.084 | 381 | 267 | 4 | 34 | 412 | 129 | 504 | 1.39e-42 | 158 |
| Msa0265250 | MtrunA17_Chr4g0062301 | 30.726 | 358 | 226 | 10 | 50 | 391 | 106 | 457 | 1.83e-42 | 157 |
| Msa0265250 | MtrunA17_Chr6g0475251 | 31.054 | 351 | 215 | 6 | 45 | 380 | 115 | 453 | 2.19e-42 | 158 |
| Msa0265250 | MtrunA17_Chr4g0058591 | 31.595 | 326 | 213 | 4 | 24 | 343 | 189 | 510 | 1.90e-40 | 150 |
| Msa0265250 | MtrunA17_Chr2g0309551 | 26.173 | 405 | 234 | 7 | 40 | 382 | 108 | 509 | 1.04e-39 | 149 |
| Msa0265250 | MtrunA17_Chr8g0347171 | 29.427 | 384 | 244 | 10 | 42 | 406 | 161 | 536 | 1.39e-38 | 147 |
| Msa0265250 | MtrunA17_Chr3g0114081 | 29.396 | 364 | 229 | 7 | 47 | 383 | 22 | 384 | 1.42e-38 | 146 |
| Msa0265250 | MtrunA17_Chr1g0204391 | 28.926 | 363 | 223 | 5 | 49 | 380 | 52 | 410 | 3.97e-38 | 145 |
| Msa0265250 | MtrunA17_Chr8g0347161 | 28.646 | 384 | 247 | 9 | 42 | 406 | 103 | 478 | 1.62e-37 | 143 |
| Msa0265250 | MtrunA17_Chr7g0236831 | 26.077 | 441 | 236 | 10 | 41 | 399 | 163 | 595 | 4.00e-37 | 143 |
| Msa0265250 | MtrunA17_Chr8g0347151 | 28.385 | 384 | 248 | 8 | 42 | 406 | 202 | 577 | 2.13e-36 | 140 |
| Msa0265250 | MtrunA17_Chr8g0386451 | 27.344 | 384 | 257 | 7 | 42 | 406 | 289 | 669 | 7.67e-35 | 137 |
| Msa0265250 | MtrunA17_Chr4g0025141 | 37.198 | 207 | 115 | 5 | 214 | 405 | 14 | 220 | 9.49e-35 | 129 |
| Msa0265250 | MtrunA17_Chr1g0192021 | 26.406 | 409 | 246 | 8 | 41 | 397 | 26 | 431 | 5.47e-34 | 133 |
| Msa0265250 | MtrunA17_Chr6g0466611 | 28.312 | 385 | 238 | 11 | 41 | 396 | 142 | 517 | 2.15e-33 | 132 |
| Msa0265250 | MtrunA17_Chr4g0034411 | 28.947 | 342 | 224 | 10 | 68 | 395 | 102 | 438 | 2.63e-33 | 132 |
| Msa0265250 | MtrunA17_Chr3g0137901 | 39.634 | 164 | 97 | 2 | 247 | 409 | 10 | 172 | 1.40e-32 | 121 |
| Msa0265250 | MtrunA17_Chr5g0443991 | 27.062 | 388 | 261 | 9 | 46 | 413 | 81 | 466 | 2.09e-32 | 129 |
| Msa0265250 | MtrunA17_Chr5g0429221 | 26.494 | 385 | 263 | 7 | 40 | 413 | 2 | 377 | 4.99e-28 | 114 |
| Msa0265250 | MtrunA17_Chr3g0137891 | 42.236 | 161 | 90 | 3 | 78 | 235 | 1 | 161 | 2.91e-27 | 108 |
| Msa0265250 | MtrunA17_Chr3g0145781 | 26.933 | 401 | 239 | 13 | 24 | 383 | 120 | 507 | 1.43e-25 | 108 |
| Msa0265250 | MtrunA17_Chr4g0039471 | 36.126 | 191 | 119 | 1 | 36 | 223 | 218 | 408 | 6.08e-24 | 102 |
| Msa0265250 | MtrunA17_Chr4g0025131 | 34.270 | 178 | 111 | 4 | 24 | 197 | 40 | 215 | 2.64e-23 | 99.0 |
| Msa0265250 | MtrunA17_Chr4g0074521 | 25.445 | 393 | 237 | 14 | 49 | 399 | 90 | 468 | 2.96e-23 | 101 |
| Msa0265250 | MtrunA17_Chr4g0004301 | 23.499 | 383 | 214 | 6 | 79 | 389 | 71 | 446 | 8.28e-23 | 100 |
| Msa0265250 | MtrunA17_Chr4g0025101 | 31.034 | 232 | 94 | 7 | 198 | 405 | 7 | 196 | 1.73e-22 | 95.1 |
| Msa0265250 | MtrunA17_Chr4g0062321 | 29.237 | 236 | 157 | 6 | 117 | 348 | 4 | 233 | 3.11e-22 | 95.1 |
| Msa0265250 | MtrunA17_Chr5g0434301 | 22.872 | 376 | 225 | 6 | 79 | 389 | 71 | 446 | 4.31e-22 | 98.2 |
| Msa0265250 | MtrunA17_Chr8g0349951 | 36.429 | 140 | 82 | 2 | 40 | 175 | 9 | 145 | 4.39e-19 | 84.0 |
| Msa0265250 | MtrunA17_Chr4g0029191 | 31.285 | 179 | 114 | 4 | 41 | 210 | 44 | 222 | 9.38e-18 | 85.5 |
| Msa0265250 | MtrunA17_Chr4g0029191 | 35.106 | 94 | 61 | 0 | 310 | 403 | 392 | 485 | 8.37e-14 | 73.2 |
| Msa0265250 | MtrunA17_Chr1g0155201 | 29.249 | 253 | 147 | 11 | 152 | 395 | 6 | 235 | 2.09e-17 | 83.2 |
| Msa0265250 | MtrunA17_Chr2g0301281 | 30.726 | 179 | 115 | 4 | 41 | 210 | 41 | 219 | 2.96e-17 | 84.0 |
| Msa0265250 | MtrunA17_Chr2g0301281 | 35.052 | 97 | 62 | 1 | 310 | 406 | 389 | 484 | 2.35e-14 | 75.1 |
| Msa0265250 | MtrunA17_Chr8g0354761 | 23.889 | 360 | 244 | 13 | 64 | 404 | 31 | 379 | 6.22e-17 | 82.4 |
| Msa0265250 | MtrunA17_Chr4g0058601 | 47.170 | 53 | 28 | 0 | 344 | 396 | 9 | 61 | 8.48e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265250 | AT1G54270.1 | 92.995 | 414 | 26 | 2 | 1 | 413 | 1 | 412 | 0.0 | 792 |
| Msa0265250 | AT3G13920.1 | 92.512 | 414 | 28 | 2 | 1 | 413 | 1 | 412 | 0.0 | 788 |
| Msa0265250 | AT1G54270.2 | 91.787 | 414 | 26 | 3 | 1 | 413 | 1 | 407 | 0.0 | 775 |
| Msa0265250 | AT3G13920.4 | 91.304 | 414 | 28 | 3 | 1 | 413 | 1 | 407 | 0.0 | 770 |
| Msa0265250 | AT1G72730.1 | 89.372 | 414 | 43 | 1 | 1 | 413 | 1 | 414 | 0.0 | 769 |
| Msa0265250 | AT3G13920.3 | 94.330 | 388 | 21 | 1 | 27 | 413 | 15 | 402 | 0.0 | 755 |
| Msa0265250 | AT3G13920.2 | 92.366 | 393 | 27 | 2 | 1 | 392 | 1 | 391 | 0.0 | 746 |
| Msa0265250 | AT3G13920.5 | 92.366 | 393 | 27 | 2 | 1 | 392 | 5 | 395 | 0.0 | 745 |
| Msa0265250 | AT3G19760.1 | 62.725 | 389 | 138 | 1 | 25 | 413 | 27 | 408 | 0.0 | 511 |
| Msa0265250 | AT1G51380.1 | 58.108 | 370 | 155 | 0 | 40 | 409 | 22 | 391 | 1.33e-162 | 462 |
| Msa0265250 | AT1G51380.2 | 58.103 | 253 | 106 | 0 | 40 | 292 | 22 | 274 | 7.77e-108 | 319 |
| Msa0265250 | AT3G61240.2 | 40.650 | 369 | 215 | 4 | 42 | 409 | 126 | 491 | 2.91e-90 | 281 |
| Msa0265250 | AT3G61240.1 | 40.650 | 369 | 215 | 4 | 42 | 409 | 126 | 491 | 2.91e-90 | 281 |
| Msa0265250 | AT2G45810.1 | 40.872 | 367 | 213 | 4 | 42 | 407 | 156 | 519 | 1.25e-88 | 278 |
| Msa0265250 | AT4G00660.1 | 39.837 | 369 | 218 | 4 | 42 | 409 | 133 | 498 | 1.34e-88 | 278 |
| Msa0265250 | AT4G00660.2 | 39.837 | 369 | 218 | 4 | 42 | 409 | 133 | 498 | 1.34e-88 | 278 |
| Msa0265250 | AT1G51380.4 | 55.660 | 212 | 94 | 0 | 40 | 251 | 22 | 233 | 2.12e-82 | 255 |
| Msa0265250 | AT1G51380.3 | 55.660 | 212 | 94 | 0 | 40 | 251 | 22 | 233 | 3.99e-82 | 254 |
| Msa0265250 | AT5G11170.1 | 38.660 | 388 | 231 | 7 | 28 | 409 | 33 | 419 | 2.21e-77 | 246 |
| Msa0265250 | AT5G11200.1 | 38.660 | 388 | 231 | 7 | 28 | 409 | 33 | 419 | 2.21e-77 | 246 |
| Msa0265250 | AT5G11170.2 | 39.169 | 337 | 199 | 6 | 78 | 409 | 1 | 336 | 1.07e-69 | 224 |
| Msa0265250 | AT5G11200.3 | 34.965 | 429 | 231 | 8 | 28 | 409 | 33 | 460 | 6.44e-69 | 225 |
| Msa0265250 | AT3G53110.1 | 34.988 | 403 | 235 | 10 | 26 | 407 | 81 | 477 | 2.12e-67 | 222 |
| Msa0265250 | AT1G55150.1 | 34.626 | 361 | 230 | 2 | 40 | 394 | 99 | 459 | 9.86e-66 | 218 |
| Msa0265250 | AT1G55150.2 | 34.626 | 361 | 230 | 2 | 40 | 394 | 124 | 484 | 1.13e-65 | 218 |
| Msa0265250 | AT5G26742.1 | 35.238 | 420 | 243 | 10 | 9 | 413 | 80 | 485 | 2.34e-64 | 219 |
| Msa0265250 | AT5G26742.2 | 35.238 | 420 | 243 | 10 | 9 | 413 | 80 | 485 | 2.37e-64 | 219 |
| Msa0265250 | AT5G63120.2 | 34.085 | 399 | 247 | 4 | 24 | 413 | 153 | 544 | 3.82e-64 | 216 |
| Msa0265250 | AT5G26742.3 | 36.458 | 384 | 212 | 10 | 45 | 413 | 26 | 392 | 1.50e-63 | 216 |
| Msa0265250 | AT2G33730.1 | 34.987 | 383 | 221 | 6 | 41 | 397 | 314 | 694 | 1.81e-63 | 217 |
| Msa0265250 | AT3G22310.2 | 35.484 | 372 | 227 | 6 | 45 | 407 | 121 | 488 | 1.59e-62 | 212 |
| Msa0265250 | AT3G22310.1 | 35.484 | 372 | 227 | 6 | 45 | 407 | 121 | 488 | 2.09e-62 | 212 |
| Msa0265250 | AT3G22330.1 | 35.215 | 372 | 228 | 6 | 45 | 407 | 109 | 476 | 3.80e-62 | 211 |
| Msa0265250 | AT2G47330.1 | 34.359 | 390 | 238 | 7 | 37 | 412 | 222 | 607 | 2.96e-60 | 209 |
| Msa0265250 | AT1G77030.1 | 32.527 | 372 | 243 | 4 | 42 | 407 | 30 | 399 | 1.68e-59 | 207 |
| Msa0265250 | AT3G06480.1 | 35.156 | 384 | 230 | 6 | 41 | 412 | 436 | 812 | 5.11e-59 | 208 |
| Msa0265250 | AT1G20920.2 | 32.850 | 414 | 263 | 7 | 9 | 412 | 163 | 571 | 1.35e-58 | 205 |
| Msa0265250 | AT3G58510.1 | 33.247 | 385 | 237 | 7 | 41 | 406 | 152 | 535 | 4.74e-58 | 200 |
| Msa0265250 | AT3G58510.3 | 33.247 | 385 | 237 | 7 | 41 | 406 | 152 | 535 | 4.74e-58 | 200 |
| Msa0265250 | AT3G58510.2 | 33.247 | 385 | 237 | 7 | 41 | 406 | 152 | 535 | 4.74e-58 | 200 |
| Msa0265250 | AT2G42520.2 | 35.000 | 400 | 230 | 10 | 33 | 404 | 149 | 546 | 6.27e-58 | 200 |
| Msa0265250 | AT2G42520.1 | 35.000 | 400 | 230 | 10 | 33 | 404 | 149 | 546 | 6.27e-58 | 200 |
| Msa0265250 | AT2G42520.3 | 35.000 | 400 | 230 | 10 | 33 | 404 | 149 | 546 | 6.27e-58 | 200 |
| Msa0265250 | AT3G58570.1 | 33.753 | 397 | 240 | 8 | 33 | 406 | 136 | 532 | 3.82e-57 | 198 |
| Msa0265250 | AT5G14610.2 | 32.808 | 381 | 243 | 6 | 41 | 412 | 162 | 538 | 5.38e-57 | 198 |
| Msa0265250 | AT5G14610.6 | 32.808 | 381 | 243 | 6 | 41 | 412 | 162 | 538 | 5.94e-57 | 198 |
| Msa0265250 | AT1G20920.4 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT1G20920.6 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT1G20920.3 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT1G20920.7 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT1G20920.5 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT1G20920.1 | 34.301 | 379 | 233 | 6 | 46 | 412 | 535 | 909 | 6.65e-57 | 202 |
| Msa0265250 | AT5G14610.5 | 32.808 | 381 | 243 | 6 | 41 | 412 | 170 | 546 | 6.90e-57 | 198 |
| Msa0265250 | AT5G60990.1 | 32.071 | 396 | 245 | 5 | 36 | 413 | 5 | 394 | 1.72e-56 | 192 |
| Msa0265250 | AT3G01540.1 | 34.555 | 382 | 235 | 10 | 41 | 412 | 159 | 535 | 4.26e-56 | 195 |
| Msa0265250 | AT3G01540.4 | 34.555 | 382 | 235 | 10 | 41 | 412 | 159 | 535 | 4.75e-56 | 195 |
| Msa0265250 | AT3G01540.2 | 34.555 | 382 | 235 | 10 | 41 | 412 | 159 | 535 | 4.75e-56 | 195 |
| Msa0265250 | AT3G01540.3 | 34.555 | 382 | 235 | 10 | 41 | 412 | 159 | 535 | 4.75e-56 | 195 |
| Msa0265250 | AT1G16280.1 | 33.158 | 380 | 238 | 5 | 30 | 396 | 43 | 419 | 1.50e-55 | 191 |
| Msa0265250 | AT4G16630.1 | 33.867 | 375 | 239 | 4 | 31 | 396 | 155 | 529 | 2.13e-54 | 193 |
| Msa0265250 | AT5G14610.7 | 32.153 | 367 | 236 | 6 | 55 | 412 | 45 | 407 | 2.00e-53 | 186 |
| Msa0265250 | AT5G14610.3 | 32.153 | 367 | 236 | 6 | 55 | 412 | 45 | 407 | 2.00e-53 | 186 |
| Msa0265250 | AT5G11200.2 | 31.991 | 447 | 238 | 11 | 28 | 409 | 33 | 478 | 8.62e-53 | 183 |
| Msa0265250 | AT3G02065.3 | 32.603 | 365 | 233 | 5 | 41 | 394 | 111 | 473 | 2.96e-52 | 182 |
| Msa0265250 | AT3G02065.2 | 32.603 | 365 | 233 | 5 | 41 | 394 | 111 | 473 | 2.96e-52 | 182 |
| Msa0265250 | AT5G14610.1 | 32.249 | 369 | 237 | 6 | 53 | 412 | 242 | 606 | 3.55e-52 | 186 |
| Msa0265250 | AT4G33370.1 | 30.848 | 389 | 250 | 8 | 40 | 412 | 97 | 482 | 6.76e-52 | 182 |
| Msa0265250 | AT1G28180.1 | 34.694 | 343 | 208 | 6 | 79 | 410 | 12 | 349 | 1.49e-51 | 177 |
| Msa0265250 | AT5G51280.1 | 30.591 | 389 | 251 | 7 | 40 | 412 | 146 | 531 | 1.66e-51 | 182 |
| Msa0265250 | AT1G31970.1 | 33.075 | 387 | 241 | 6 | 40 | 413 | 116 | 497 | 2.44e-51 | 181 |
| Msa0265250 | AT3G18600.1 | 31.649 | 376 | 247 | 6 | 41 | 408 | 90 | 463 | 3.15e-49 | 176 |
| Msa0265250 | AT3G09620.1 | 32.447 | 376 | 209 | 7 | 46 | 409 | 402 | 744 | 4.93e-49 | 179 |
| Msa0265250 | AT3G09620.2 | 32.447 | 376 | 209 | 7 | 46 | 409 | 403 | 745 | 5.33e-49 | 179 |
| Msa0265250 | AT3G09720.2 | 29.921 | 381 | 260 | 4 | 34 | 412 | 138 | 513 | 1.60e-48 | 173 |
| Msa0265250 | AT3G09720.1 | 29.921 | 381 | 260 | 4 | 34 | 412 | 138 | 513 | 1.60e-48 | 173 |
| Msa0265250 | AT3G02065.1 | 32.628 | 331 | 210 | 5 | 75 | 394 | 8 | 336 | 7.75e-47 | 165 |
| Msa0265250 | AT1G12770.2 | 27.363 | 402 | 230 | 6 | 40 | 381 | 110 | 509 | 9.16e-47 | 169 |
| Msa0265250 | AT1G12770.1 | 27.363 | 402 | 230 | 6 | 40 | 381 | 110 | 509 | 9.16e-47 | 169 |
| Msa0265250 | AT5G65900.1 | 30.667 | 375 | 251 | 6 | 38 | 404 | 152 | 525 | 1.45e-45 | 167 |
| Msa0265250 | AT5G62190.1 | 32.181 | 376 | 227 | 9 | 55 | 411 | 111 | 477 | 2.55e-45 | 166 |
| Msa0265250 | AT5G63120.3 | 33.435 | 329 | 203 | 4 | 24 | 343 | 153 | 474 | 1.48e-44 | 161 |
| Msa0265250 | AT5G63120.4 | 33.435 | 329 | 203 | 4 | 24 | 343 | 153 | 474 | 1.48e-44 | 161 |
| Msa0265250 | AT5G63120.5 | 33.435 | 329 | 203 | 4 | 24 | 343 | 153 | 474 | 1.48e-44 | 161 |
| Msa0265250 | AT5G63120.1 | 33.435 | 329 | 203 | 4 | 24 | 343 | 153 | 474 | 1.92e-44 | 161 |
| Msa0265250 | AT3G06480.2 | 33.333 | 324 | 197 | 6 | 41 | 352 | 436 | 752 | 1.75e-41 | 156 |
| Msa0265250 | AT5G05450.1 | 30.168 | 358 | 225 | 7 | 50 | 383 | 26 | 382 | 6.00e-41 | 153 |
| Msa0265250 | AT1G71370.1 | 30.114 | 352 | 230 | 7 | 47 | 383 | 23 | 373 | 3.08e-40 | 151 |
| Msa0265250 | AT5G14610.4 | 31.024 | 332 | 216 | 6 | 41 | 363 | 170 | 497 | 4.02e-40 | 149 |
| Msa0265250 | AT5G63630.1 | 29.948 | 384 | 242 | 8 | 42 | 406 | 56 | 431 | 1.02e-38 | 146 |
| Msa0265250 | AT5G08620.1 | 30.151 | 398 | 235 | 9 | 42 | 412 | 82 | 463 | 1.77e-38 | 146 |
| Msa0265250 | AT5G08610.1 | 30.318 | 409 | 237 | 11 | 28 | 406 | 369 | 759 | 1.88e-38 | 148 |
| Msa0265250 | AT5G63630.2 | 29.948 | 384 | 242 | 8 | 42 | 406 | 250 | 625 | 1.48e-37 | 145 |
| Msa0265250 | AT2G07750.1 | 27.157 | 394 | 248 | 10 | 42 | 407 | 377 | 759 | 3.87e-35 | 138 |
| Msa0265250 | AT1G63250.1 | 26.866 | 402 | 248 | 10 | 35 | 406 | 321 | 706 | 1.19e-33 | 134 |
| Msa0265250 | AT4G34910.1 | 26.098 | 387 | 229 | 8 | 40 | 372 | 46 | 429 | 3.62e-32 | 129 |
| Msa0265250 | AT5G54910.1 | 27.273 | 396 | 263 | 12 | 17 | 396 | 49 | 435 | 1.25e-31 | 127 |
| Msa0265250 | AT5G19210.2 | 27.763 | 389 | 231 | 12 | 49 | 399 | 85 | 461 | 1.60e-31 | 125 |
| Msa0265250 | AT2G40700.1 | 25.225 | 444 | 251 | 12 | 41 | 403 | 31 | 474 | 3.67e-31 | 125 |
| Msa0265250 | AT4G09730.1 | 26.753 | 385 | 246 | 9 | 40 | 396 | 112 | 488 | 4.10e-31 | 125 |
| Msa0265250 | AT3G06980.1 | 28.500 | 400 | 239 | 14 | 21 | 383 | 360 | 749 | 5.58e-28 | 117 |
| Msa0265250 | AT1G71280.2 | 27.419 | 310 | 189 | 9 | 47 | 345 | 24 | 308 | 2.43e-26 | 108 |
| Msa0265250 | AT4G15850.1 | 25.648 | 386 | 211 | 13 | 79 | 394 | 74 | 453 | 4.85e-26 | 110 |
| Msa0265250 | AT1G71280.1 | 27.419 | 310 | 189 | 9 | 47 | 345 | 24 | 308 | 1.65e-25 | 108 |
| Msa0265250 | AT3G16840.1 | 32.821 | 195 | 107 | 4 | 41 | 211 | 191 | 385 | 1.92e-19 | 91.3 |
| Msa0265250 | AT3G16840.2 | 32.821 | 195 | 107 | 4 | 41 | 211 | 192 | 386 | 2.01e-19 | 91.3 |
| Msa0265250 | AT5G19210.1 | 26.032 | 315 | 183 | 11 | 123 | 399 | 2 | 304 | 2.00e-17 | 83.2 |
| Msa0265250 | AT5G19210.3 | 26.032 | 315 | 183 | 11 | 123 | 399 | 2 | 304 | 2.00e-17 | 83.2 |
| Msa0265250 | AT1G28180.2 | 37.273 | 110 | 55 | 2 | 79 | 177 | 12 | 118 | 1.02e-11 | 62.4 |
Find 118 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCATAAGGTTTAAATTTA+AGG | 0.096044 | 2_2:-65479393 | None:intergenic |
| TGTTTAATCACTTAATTATT+AGG | 0.102047 | 2_2:+65479327 | Msa0265250:three_prime_UTR |
| GAACACTCCAACCTGAATTT+TGG | 0.146444 | 2_2:-65478575 | None:intergenic |
| TCGAAGAAAGATTGAAAATT+AGG | 0.147639 | 2_2:-65476314 | None:intergenic |
| GAAGAGTGAGAGAGAGATTT+AGG | 0.185365 | 2_2:-65476251 | None:intergenic |
| TGACATGTATGATATAAATA+AGG | 0.246109 | 2_2:-65479421 | None:intergenic |
| TCTCATTACCACTGACCTTT+TGG | 0.272997 | 2_2:+65478936 | Msa0265250:CDS |
| GTTTAATCACTTAATTATTA+GGG | 0.282354 | 2_2:+65479328 | Msa0265250:three_prime_UTR |
| CGGCGCAGATCCGAGGAGTT+TGG | 0.291726 | 2_2:+65476286 | Msa0265250:five_prime_UTR |
| ACATCTGACTCTATTTATAA+TGG | 0.292865 | 2_2:+65479291 | Msa0265250:three_prime_UTR |
| ACATCGAGACCCTTGATAAA+AGG | 0.302219 | 2_2:-65477905 | None:intergenic |
| TGCTGTGCCAGCTCCCTTGT+TGG | 0.308505 | 2_2:-65478034 | None:intergenic |
| TCAGTGCCAGGCTTTGGTTT+TGG | 0.312026 | 2_2:+65478009 | Msa0265250:CDS |
| GTTGCTGCCACCCAAAATTC+AGG | 0.315611 | 2_2:+65478564 | Msa0265250:CDS |
| CGAAGAAAGATTGAAAATTA+GGG | 0.317411 | 2_2:-65476313 | None:intergenic |
| GCTGTGCCAGCTCCCTTGTT+GGG | 0.317476 | 2_2:-65478033 | None:intergenic |
| TTGCATTAAAATGTTTGTTT+TGG | 0.318028 | 2_2:+65478231 | Msa0265250:CDS |
| CGCTTTACCAGAATTCTAAC+TGG | 0.324777 | 2_2:-65478652 | None:intergenic |
| CAGATGTCTTTGAACTCTAA+TGG | 0.325903 | 2_2:-65479275 | None:intergenic |
| AAGACAGCGACGTTCTGTTC+TGG | 0.339543 | 2_2:+65477956 | Msa0265250:CDS |
| TTGTTCTTTGTTAAGTCATC+GGG | 0.340229 | 2_2:+65479194 | Msa0265250:three_prime_UTR |
| TGGTGATTACCTTGGTGTTA+AGG | 0.345997 | 2_2:+65478081 | Msa0265250:CDS |
| TGATGATATCACGAGTGTTT+TGG | 0.362515 | 2_2:-65478882 | None:intergenic |
| GAATAAGCCAGTTAGAATTC+TGG | 0.365648 | 2_2:+65478645 | Msa0265250:CDS |
| GGCGCAGATCCGAGGAGTTT+GGG | 0.371205 | 2_2:+65476287 | Msa0265250:five_prime_UTR |
| CTGAGAGGCATATATGCTTA+TGG | 0.371983 | 2_2:+65477282 | Msa0265250:CDS |
| GTATCAAATTGTGAACCTTC+CGG | 0.388344 | 2_2:-65477065 | None:intergenic |
| TTATGGTTTGGTTCAGTGCC+AGG | 0.388767 | 2_2:+65477997 | Msa0265250:CDS |
| AAAACTATCTCCATCGTATT+GGG | 0.393330 | 2_2:+65479022 | Msa0265250:CDS |
| CAACAACATGGACACCAGTT+TGG | 0.395614 | 2_2:-65478153 | None:intergenic |
| CTTGTGATCTCCAGAGCCTC+TGG | 0.397309 | 2_2:-65478613 | None:intergenic |
| GCAGCAGCTTGATTATGGTT+TGG | 0.397488 | 2_2:+65477985 | Msa0265250:CDS |
| TTTGGTTCAGTGCCAGGCTT+TGG | 0.398715 | 2_2:+65478003 | Msa0265250:CDS |
| GAAAACTATCTCCATCGTAT+TGG | 0.406801 | 2_2:+65479021 | Msa0265250:CDS |
| ATTGGGCGAAGTGGGCGTTT+TGG | 0.409374 | 2_2:+65479039 | Msa0265250:CDS |
| AAATAAGGGTTGCTAGCATA+AGG | 0.415054 | 2_2:-65479406 | None:intergenic |
| AGATGTCTTTGAACTCTAAT+GGG | 0.418418 | 2_2:-65479274 | None:intergenic |
| CATGTTGTTGTTGGTACTCC+TGG | 0.424537 | 2_2:+65478166 | Msa0265250:CDS |
| AATGCTTTCACGTGGTTTCA+AGG | 0.432515 | 2_2:+65478267 | Msa0265250:CDS |
| CCCCTTTGCTGTATTGCAGA+TGG | 0.433851 | 2_2:-65477875 | None:intergenic |
| TTTGTTCTTTGTTAAGTCAT+CGG | 0.435160 | 2_2:+65479193 | Msa0265250:three_prime_UTR |
| GCCATCTGCAATACAGCAAA+GGG | 0.435434 | 2_2:+65477874 | Msa0265250:CDS |
| TTCATGAACTTCATCGTATG+AGG | 0.438056 | 2_2:-65477226 | None:intergenic |
| CGTGATGAATTGACCCTTGA+GGG | 0.439342 | 2_2:+65478673 | Msa0265250:CDS |
| GAGAGAATTGAAGAGAGAAT+AGG | 0.441445 | 2_2:-65476338 | None:intergenic |
| CATGGGTGGCTGAGACAGTA+TGG | 0.446776 | 2_2:-65478849 | None:intergenic |
| TGATGTTCAGCAAGTGTCTC+TGG | 0.448249 | 2_2:+65478969 | Msa0265250:CDS |
| CAGCAGGCTCAGTCAGGAAC+TGG | 0.451120 | 2_2:+65477932 | Msa0265250:CDS |
| GATCTGCGCCGTGGAGTTGA+AGG | 0.453865 | 2_2:-65476274 | None:intergenic |
| TACAATGCCTCCAGAGGCTC+TGG | 0.459621 | 2_2:+65478603 | Msa0265250:CDS |
| CATCAATACCACGGGCCAAA+AGG | 0.460041 | 2_2:-65478951 | None:intergenic |
| TTTGGCCCCAACAAGGGAGC+TGG | 0.463851 | 2_2:+65478027 | Msa0265250:CDS |
| AGTAGATCAGCAACATTTGA+AGG | 0.466150 | 2_2:-65479156 | None:intergenic |
| AAGGTTCATGCTTGTGTTGG+TGG | 0.466235 | 2_2:+65478100 | Msa0265250:CDS |
| TGCTGCGAAGACAGTCTCTT+CGG | 0.488354 | 2_2:+65478203 | Msa0265250:CDS |
| GTGATTCAGCAGGCTCAGTC+AGG | 0.498167 | 2_2:+65477926 | Msa0265250:CDS |
| CATCTTAGTGTCAAACTGCT+TGG | 0.499196 | 2_2:-65477087 | None:intergenic |
| CTCCATCGTATTGGGCGAAG+TGG | 0.499221 | 2_2:+65479030 | Msa0265250:CDS |
| ACTGGTGTCCATGTTGTTGT+TGG | 0.499852 | 2_2:+65478157 | Msa0265250:CDS |
| GATCAGCGTATTCTCCAAAC+TGG | 0.501639 | 2_2:+65478139 | Msa0265250:CDS |
| TTCACGTGGTTTCAAGGACC+AGG | 0.504125 | 2_2:+65478273 | Msa0265250:CDS |
| ACACAAGGCGCAAGGTGGAC+TGG | 0.505122 | 2_2:+65478800 | Msa0265250:CDS |
| GTTAAGGTTCATGCTTGTGT+TGG | 0.507288 | 2_2:+65478097 | Msa0265250:CDS |
| GTGTGATCTTTATGAGACTC+TGG | 0.521304 | 2_2:+65478750 | Msa0265250:CDS |
| ATCATGCGTGAATTCCGCTC+TGG | 0.527239 | 2_2:+65478901 | Msa0265250:CDS |
| GAAGAATTCTTGTCCTTCAG+TGG | 0.531706 | 2_2:-65477202 | None:intergenic |
| GAGAAGGTTATGAGAGCACT+TGG | 0.533228 | 2_2:+65478061 | Msa0265250:CDS |
| GTATGTATTCTACTACTACT+AGG | 0.534607 | 2_2:-65476196 | None:intergenic |
| AATTACAGGCTTTCCACTGA+AGG | 0.540134 | 2_2:+65477189 | Msa0265250:intron |
| CTGTGCCAGCTCCCTTGTTG+GGG | 0.543113 | 2_2:-65478032 | None:intergenic |
| TGCTATCAACTTCGTCACAT+TGG | 0.543489 | 2_2:+65479074 | Msa0265250:CDS |
| AGCATGTCAAACACACGTCC+AGG | 0.544974 | 2_2:-65478184 | None:intergenic |
| GGGTCTCGATGTGATTCAGC+AGG | 0.549184 | 2_2:+65477916 | Msa0265250:CDS |
| CTCTGCTACAATGCCTCCAG+AGG | 0.551425 | 2_2:+65478597 | Msa0265250:CDS |
| TTAGGGTTTCCCAAACTCCT+CGG | 0.552128 | 2_2:-65476296 | None:intergenic |
| GACATGTATGATATAAATAA+GGG | 0.554033 | 2_2:-65479420 | None:intergenic |
| TTGGGGCCAAAACCAAAGCC+TGG | 0.554251 | 2_2:-65478015 | None:intergenic |
| TCTTCGCTCACTCCACAAGC+AGG | 0.561786 | 2_2:+65476362 | Msa0265250:five_prime_UTR |
| CAGAGGCTCTGGAGATCACA+AGG | 0.564855 | 2_2:+65478614 | Msa0265250:CDS |
| CTCAGCCACCCATGGAGACA+TGG | 0.565513 | 2_2:+65478858 | Msa0265250:CDS |
| AACTCCACGGCGCAGATCCG+AGG | 0.568103 | 2_2:+65476279 | Msa0265250:five_prime_UTR |
| TCCATCGTATTGGGCGAAGT+GGG | 0.570459 | 2_2:+65479031 | Msa0265250:CDS |
| CTGCCACCCAAAATTCAGGT+TGG | 0.574116 | 2_2:+65478568 | Msa0265250:CDS |
| TTGGTCCATGTCTCCATGGG+TGG | 0.574389 | 2_2:-65478863 | None:intergenic |
| AGTCATGGCAGGTTTAGCTC+CGG | 0.585504 | 2_2:+65477046 | Msa0265250:intron |
| AGCCATCTGCAATACAGCAA+AGG | 0.592072 | 2_2:+65477873 | Msa0265250:CDS |
| CACTCTTCCCTTCAACTCCA+CGG | 0.594775 | 2_2:+65476266 | Msa0265250:five_prime_UTR |
| AACTCCTCGGATCTGCGCCG+TGG | 0.597296 | 2_2:-65476283 | None:intergenic |
| TTCTTTGTTAAGTCATCGGG+GGG | 0.598798 | 2_2:+65479197 | Msa0265250:three_prime_UTR |
| ATTGGAAGATGCAAGAATGC+TGG | 0.599752 | 2_2:+65479092 | Msa0265250:CDS |
| GCCCACTTCGCCCAATACGA+TGG | 0.601432 | 2_2:-65479032 | None:intergenic |
| AGAACTGCTTGATACCCTCA+AGG | 0.605423 | 2_2:-65478687 | None:intergenic |
| CAGGAGTACCAACAACAACA+TGG | 0.608453 | 2_2:-65478165 | None:intergenic |
| GTGATCTCCAGAGCCTCTGG+AGG | 0.613832 | 2_2:-65478610 | None:intergenic |
| ATCTGCGCCGTGGAGTTGAA+GGG | 0.615084 | 2_2:-65476273 | None:intergenic |
| TGAATGTTGACAAGGAAGAG+TGG | 0.615932 | 2_2:+65478713 | Msa0265250:CDS |
| GTTCTTTGTTAAGTCATCGG+GGG | 0.616041 | 2_2:+65479196 | Msa0265250:three_prime_UTR |
| TTGCTGAACATCAATACCAC+GGG | 0.620577 | 2_2:-65478959 | None:intergenic |
| GAGATACGTATACCTGCTTG+TGG | 0.623092 | 2_2:-65476374 | None:intergenic |
| GCTGGCACAGCAGATTGAGA+AGG | 0.628451 | 2_2:+65478045 | Msa0265250:CDS |
| CATACTGTCTCAGCCACCCA+TGG | 0.631002 | 2_2:+65478850 | Msa0265250:CDS |
| ATGGCAGGTTTAGCTCCGGA+AGG | 0.641220 | 2_2:+65477050 | Msa0265250:CDS |
| AGAGCACTTGGTGATTACCT+TGG | 0.644049 | 2_2:+65478073 | Msa0265250:CDS |
| TGTTCTTTGTTAAGTCATCG+GGG | 0.645741 | 2_2:+65479195 | Msa0265250:three_prime_UTR |
| GTTCTATAATGTGATCGTAG+AGG | 0.657829 | 2_2:+65479128 | Msa0265250:CDS |
| CTTGCTGAACATCAATACCA+CGG | 0.663030 | 2_2:-65478960 | None:intergenic |
| GCGTGATGAATTGACCCTTG+AGG | 0.663843 | 2_2:+65478672 | Msa0265250:CDS |
| ACCACGGGCCAAAAGGTCAG+TGG | 0.665992 | 2_2:-65478944 | None:intergenic |
| TTGATAGAAAATCTTCTGAG+AGG | 0.671045 | 2_2:+65477267 | Msa0265250:CDS |
| GAACTGCTTGATACCCTCAA+GGG | 0.677590 | 2_2:-65478686 | None:intergenic |
| TGGCTCACTGACAAGATGCG+AGG | 0.683723 | 2_2:+65478820 | Msa0265250:CDS |
| TGGTGGCACTAGTGTTCGTG+AGG | 0.685653 | 2_2:+65478117 | Msa0265250:CDS |
| GTTCTACGTGAATGTTGACA+AGG | 0.687466 | 2_2:+65478705 | Msa0265250:CDS |
| GAACTCGAGAAGAGCCAGAG+CGG | 0.689835 | 2_2:-65478915 | None:intergenic |
| TGTGAACACAAGGCGCAAGG+TGG | 0.709342 | 2_2:+65478795 | Msa0265250:CDS |
| AAGCATGAACCTTAACACCA+AGG | 0.715621 | 2_2:-65478090 | None:intergenic |
| GCTGATGAAATGCTTTCACG+TGG | 0.720414 | 2_2:+65478259 | Msa0265250:CDS |
| CCATCTGCAATACAGCAAAG+GGG | 0.725959 | 2_2:+65477875 | Msa0265250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTTTTTTTTAAATCA+TGG | + | chr2_2:65476865-65476884 | Msa0265250:intron | 10.0% |
| !! | CAAAAGTTTAAAAATTAATT+GGG | + | chr2_2:65477423-65477442 | Msa0265250:intron | 10.0% |
| !! | AATCTAAAAGAATGAAAATT+GGG | - | chr2_2:65476415-65476434 | None:intergenic | 15.0% |
| !! | AAATCTAAAAGAATGAAAAT+TGG | - | chr2_2:65476416-65476435 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGTAAATTTGG+AGG | + | chr2_2:65476823-65476842 | Msa0265250:intron | 15.0% |
| !!! | TAATGCATAATTTTAATTAC+AGG | + | chr2_2:65477175-65477194 | Msa0265250:intron | 15.0% |
| !! | GCAAAAGTTTAAAAATTAAT+TGG | + | chr2_2:65477422-65477441 | Msa0265250:intron | 15.0% |
| !! | TGTTTAATCACTTAATTATT+AGG | + | chr2_2:65479327-65479346 | Msa0265250:three_prime_UTR | 15.0% |
| !! | GTTTAATCACTTAATTATTA+GGG | + | chr2_2:65479328-65479347 | Msa0265250:three_prime_UTR | 15.0% |
| !! | ATCTAAAAGAATGAAAATTG+GGG | - | chr2_2:65476414-65476433 | None:intergenic | 20.0% |
| !!! | TATTAGTTTGTTTTGATTTG+TGG | + | chr2_2:65476569-65476588 | Msa0265250:intron | 20.0% |
| !! | TTATCATACATGCTTAATAA+GGG | - | chr2_2:65477339-65477358 | None:intergenic | 20.0% |
| !! | AAGGATTAAAAAATTGTGAT+AGG | - | chr2_2:65477399-65477418 | None:intergenic | 20.0% |
| !!! | TCACAATTTTTTAATCCTTT+TGG | + | chr2_2:65477400-65477419 | Msa0265250:intron | 20.0% |
| !!! | ATTTTTAAACTTTTGCCAAA+AGG | - | chr2_2:65477418-65477437 | None:intergenic | 20.0% |
| !!! | TGAAAACTCTTTAAAAATCA+TGG | + | chr2_2:65477465-65477484 | Msa0265250:intron | 20.0% |
| !! | GCAATTAATTAATTAACTCA+AGG | + | chr2_2:65477514-65477533 | Msa0265250:intron | 20.0% |
| !! | ATTAACTCAAGGTTATATAA+TGG | + | chr2_2:65477525-65477544 | Msa0265250:intron | 20.0% |
| !! | TTAACTCAAGGTTATATAAT+GGG | + | chr2_2:65477526-65477545 | Msa0265250:intron | 20.0% |
| !! | GTATATATAAACAATTTCGA+GGG | + | chr2_2:65477601-65477620 | Msa0265250:intron | 20.0% |
| !!! | TTGCATTAAAATGTTTGTTT+TGG | + | chr2_2:65478231-65478250 | Msa0265250:CDS | 20.0% |
| !! | TAGCATAAGGTTTAAATTTA+AGG | - | chr2_2:65479396-65479415 | None:intergenic | 20.0% |
| !! | GACATGTATGATATAAATAA+GGG | - | chr2_2:65479423-65479442 | None:intergenic | 20.0% |
| !! | TGACATGTATGATATAAATA+AGG | - | chr2_2:65479424-65479443 | None:intergenic | 20.0% |
| ! | CGAAGAAAGATTGAAAATTA+GGG | - | chr2_2:65476316-65476335 | None:intergenic | 25.0% |
| ! | TCGAAGAAAGATTGAAAATT+AGG | - | chr2_2:65476317-65476336 | None:intergenic | 25.0% |
| ! | TGATTTCAAAAATCAGAACT+TGG | - | chr2_2:65476518-65476537 | None:intergenic | 25.0% |
| ! | ATGAGATGATTCAAATCTTA+AGG | - | chr2_2:65476724-65476743 | None:intergenic | 25.0% |
| ! | TTAAGATTTGAATCATCTCA+TGG | + | chr2_2:65476723-65476742 | Msa0265250:intron | 25.0% |
| ! | CAAAAATAAACCAACAACAA+AGG | - | chr2_2:65476961-65476980 | None:intergenic | 25.0% |
| ! | AGATGAATGAATTGTAAGTA+AGG | + | chr2_2:65477105-65477124 | Msa0265250:intron | 25.0% |
| ! | AATAAGGGCTTAAAGAAAAA+AGG | - | chr2_2:65477324-65477343 | None:intergenic | 25.0% |
| ! | GTTATCATACATGCTTAATA+AGG | - | chr2_2:65477340-65477359 | None:intergenic | 25.0% |
| ! | TTTAAAAATTAATTGGGTGC+TGG | + | chr2_2:65477429-65477448 | Msa0265250:intron | 25.0% |
| !!! | ATGGACATTTATTTTTAGAC+AGG | + | chr2_2:65477484-65477503 | Msa0265250:intron | 25.0% |
| !!! | TGGACATTTATTTTTAGACA+GGG | + | chr2_2:65477485-65477504 | Msa0265250:intron | 25.0% |
| ! | TATATAGTGACAACTATCAA+GGG | - | chr2_2:65477563-65477582 | None:intergenic | 25.0% |
| ! | GGTATATATAAACAATTTCG+AGG | + | chr2_2:65477600-65477619 | Msa0265250:intron | 25.0% |
| ! | AGGTTAAAACGTAATAAGAA+CGG | - | chr2_2:65477729-65477748 | None:intergenic | 25.0% |
| ! | TACAGTGTATAGATGTATTT+AGG | - | chr2_2:65477749-65477768 | None:intergenic | 25.0% |
| !! | TTGTTTGTTAGAACTGAATT+TGG | + | chr2_2:65478349-65478368 | Msa0265250:intron | 25.0% |
| ! | TAAAACAAGATCAATTCATC+TGG | - | chr2_2:65478485-65478504 | None:intergenic | 25.0% |
| ! | TTTGTTCTTTGTTAAGTCAT+CGG | + | chr2_2:65479193-65479212 | Msa0265250:three_prime_UTR | 25.0% |
| ! | ACATCTGACTCTATTTATAA+TGG | + | chr2_2:65479291-65479310 | Msa0265250:three_prime_UTR | 25.0% |
| ! | CACAAGACAGAAATAAAAAA+AGG | - | chr2_2:65479363-65479382 | None:intergenic | 25.0% |
| GTATGTATTCTACTACTACT+AGG | - | chr2_2:65476199-65476218 | None:intergenic | 30.0% | |
| !!! | GTTTGTTTTGATTTGTGGTA+AGG | + | chr2_2:65476574-65476593 | Msa0265250:intron | 30.0% |
| !!! | AGGATTTGTTGTTTTCTGAT+TGG | + | chr2_2:65476746-65476765 | Msa0265250:intron | 30.0% |
| CAAGAAAACACATAACACAA+GGG | - | chr2_2:65476920-65476939 | None:intergenic | 30.0% | |
| AGAACAAAACAGTACACTTT+AGG | - | chr2_2:65477024-65477043 | None:intergenic | 30.0% | |
| !! | ACTGTTTTGTTCTATAGTCA+TGG | + | chr2_2:65477031-65477050 | Msa0265250:intron | 30.0% |
| ! | TCATGAAACTTTTGATGCAA+TGG | + | chr2_2:65477242-65477261 | Msa0265250:CDS | 30.0% |
| ! | CATGAAACTTTTGATGCAAT+GGG | + | chr2_2:65477243-65477262 | Msa0265250:CDS | 30.0% |
| TTGATAGAAAATCTTCTGAG+AGG | + | chr2_2:65477267-65477286 | Msa0265250:CDS | 30.0% | |
| AATTGTGATAGGCACTAATT+GGG | - | chr2_2:65477388-65477407 | None:intergenic | 30.0% | |
| AAATTGTGATAGGCACTAAT+TGG | - | chr2_2:65477389-65477408 | None:intergenic | 30.0% | |
| !!! | GGACATTTATTTTTAGACAG+GGG | + | chr2_2:65477486-65477505 | Msa0265250:intron | 30.0% |
| !!! | GACATTTATTTTTAGACAGG+GGG | + | chr2_2:65477487-65477506 | Msa0265250:intron | 30.0% |
| ATATAGTGACAACTATCAAG+GGG | - | chr2_2:65477562-65477581 | None:intergenic | 30.0% | |
| CTATATAGTGACAACTATCA+AGG | - | chr2_2:65477564-65477583 | None:intergenic | 30.0% | |
| TATATACCAATGACAAGCAT+GGG | - | chr2_2:65477588-65477607 | None:intergenic | 30.0% | |
| ATATATACCAATGACAAGCA+TGG | - | chr2_2:65477589-65477608 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTAATCGCATGTT+CGG | + | chr2_2:65477633-65477652 | Msa0265250:intron | 30.0% |
| ! | GGAATTGTTCCTTTTATCAA+GGG | + | chr2_2:65477896-65477915 | Msa0265250:CDS | 30.0% |
| TGTGTTAGATTTCTGATTGT+TGG | + | chr2_2:65478296-65478315 | Msa0265250:intron | 30.0% | |
| AGGTAAAGGGTTATAGAATA+TGG | - | chr2_2:65478443-65478462 | None:intergenic | 30.0% | |
| AAAACTATCTCCATCGTATT+GGG | + | chr2_2:65479022-65479041 | Msa0265250:CDS | 30.0% | |
| TTGTTCTTTGTTAAGTCATC+GGG | + | chr2_2:65479194-65479213 | Msa0265250:three_prime_UTR | 30.0% | |
| AGATGTCTTTGAACTCTAAT+GGG | - | chr2_2:65479277-65479296 | None:intergenic | 30.0% | |
| GAGAGAATTGAAGAGAGAAT+AGG | - | chr2_2:65476341-65476360 | None:intergenic | 35.0% | |
| AGATTTGAATCATCTCATGG+AGG | + | chr2_2:65476726-65476745 | Msa0265250:intron | 35.0% | |
| GCAAGAAAACACATAACACA+AGG | - | chr2_2:65476921-65476940 | None:intergenic | 35.0% | |
| ! | TGTTTTCTTGCAGTGATATC+TGG | + | chr2_2:65476930-65476949 | Msa0265250:intron | 35.0% |
| ! | GTTTTCTTGCAGTGATATCT+GGG | + | chr2_2:65476931-65476950 | Msa0265250:intron | 35.0% |
| ! | TTTTCTTGCAGTGATATCTG+GGG | + | chr2_2:65476932-65476951 | Msa0265250:intron | 35.0% |
| ! | TTTTGTTCTATAGTCATGGC+AGG | + | chr2_2:65477035-65477054 | Msa0265250:intron | 35.0% |
| GTATCAAATTGTGAACCTTC+CGG | - | chr2_2:65477068-65477087 | None:intergenic | 35.0% | |
| TTCATGAACTTCATCGTATG+AGG | - | chr2_2:65477229-65477248 | None:intergenic | 35.0% | |
| ATATACCAATGACAAGCATG+GGG | - | chr2_2:65477587-65477606 | None:intergenic | 35.0% | |
| ATGTTCTGTTCTTGTGCTTA+AGG | + | chr2_2:65477842-65477861 | Msa0265250:intron | 35.0% | |
| ! | GGGAATTGTTCCTTTTATCA+AGG | + | chr2_2:65477895-65477914 | Msa0265250:CDS | 35.0% |
| ! | ATTTTGCAGCAGCTTGATTA+TGG | + | chr2_2:65477980-65477999 | Msa0265250:CDS | 35.0% |
| AATCAGAAATCTAACACACC+TGG | - | chr2_2:65478294-65478313 | None:intergenic | 35.0% | |
| CTGATTGTTGGAACTGAATT+TGG | + | chr2_2:65478308-65478327 | Msa0265250:intron | 35.0% | |
| TTGTTGGAACTGAATTTGGT+TGG | + | chr2_2:65478312-65478331 | Msa0265250:intron | 35.0% | |
| AACTGAATTTGGTTGGAGTT+GGG | + | chr2_2:65478319-65478338 | Msa0265250:intron | 35.0% | |
| GTAGGTCAAATGAAGGTAAA+GGG | - | chr2_2:65478456-65478475 | None:intergenic | 35.0% | |
| AGTAGGTCAAATGAAGGTAA+AGG | - | chr2_2:65478457-65478476 | None:intergenic | 35.0% | |
| ! | AACACTCCAACCTGAATTTT+GGG | - | chr2_2:65478577-65478596 | None:intergenic | 35.0% |
| GAATAAGCCAGTTAGAATTC+TGG | + | chr2_2:65478645-65478664 | Msa0265250:CDS | 35.0% | |
| AAAAATGACACTCTGAGTGA+TGG | - | chr2_2:65478776-65478795 | None:intergenic | 35.0% | |
| !!! | GTGTCATTTTTGTGAACACA+AGG | + | chr2_2:65478785-65478804 | Msa0265250:CDS | 35.0% |
| ! | TGATGATATCACGAGTGTTT+TGG | - | chr2_2:65478885-65478904 | None:intergenic | 35.0% |
| !!! | ATGGAGATAGTTTTCAGGTT+GGG | - | chr2_2:65479016-65479035 | None:intergenic | 35.0% |
| ! | ATACGATGGAGATAGTTTTC+AGG | - | chr2_2:65479021-65479040 | None:intergenic | 35.0% |
| GAAAACTATCTCCATCGTAT+TGG | + | chr2_2:65479021-65479040 | Msa0265250:CDS | 35.0% | |
| GTTCTATAATGTGATCGTAG+AGG | + | chr2_2:65479128-65479147 | Msa0265250:CDS | 35.0% | |
| AGTAGATCAGCAACATTTGA+AGG | - | chr2_2:65479159-65479178 | None:intergenic | 35.0% | |
| TGTTCTTTGTTAAGTCATCG+GGG | + | chr2_2:65479195-65479214 | Msa0265250:three_prime_UTR | 35.0% | |
| CAGATGTCTTTGAACTCTAA+TGG | - | chr2_2:65479278-65479297 | None:intergenic | 35.0% | |
| AAATAAGGGTTGCTAGCATA+AGG | - | chr2_2:65479409-65479428 | None:intergenic | 35.0% | |
| GAAGAGTGAGAGAGAGATTT+AGG | - | chr2_2:65476254-65476273 | None:intergenic | 40.0% | |
| CATCTTAGTGTCAAACTGCT+TGG | - | chr2_2:65477090-65477109 | None:intergenic | 40.0% | |
| AATTACAGGCTTTCCACTGA+AGG | + | chr2_2:65477189-65477208 | Msa0265250:intron | 40.0% | |
| GAAGAATTCTTGTCCTTCAG+TGG | - | chr2_2:65477205-65477224 | None:intergenic | 40.0% | |
| ! | CTGAGAGGCATATATGCTTA+TGG | + | chr2_2:65477282-65477301 | Msa0265250:CDS | 40.0% |
| !!! | TTATTTTTAGACAGGGGGCT+TGG | + | chr2_2:65477492-65477511 | Msa0265250:intron | 40.0% |
| CAAGAACAGAACATCACACA+TGG | - | chr2_2:65477836-65477855 | None:intergenic | 40.0% | |
| ACATCGAGACCCTTGATAAA+AGG | - | chr2_2:65477908-65477927 | None:intergenic | 40.0% | |
| !! | TGGTGATTACCTTGGTGTTA+AGG | + | chr2_2:65478081-65478100 | Msa0265250:CDS | 40.0% |
| AAGCATGAACCTTAACACCA+AGG | - | chr2_2:65478093-65478112 | None:intergenic | 40.0% | |
| GTTAAGGTTCATGCTTGTGT+TGG | + | chr2_2:65478097-65478116 | Msa0265250:CDS | 40.0% | |
| AATGCTTTCACGTGGTTTCA+AGG | + | chr2_2:65478267-65478286 | Msa0265250:CDS | 40.0% | |
| GAACTGAATTTGGTTGGAGT+TGG | + | chr2_2:65478318-65478337 | Msa0265250:intron | 40.0% | |
| GTGAGAAGTAGGTCAAATGA+AGG | - | chr2_2:65478463-65478482 | None:intergenic | 40.0% | |
| CAATTCATCTGGTGAGAAGT+AGG | - | chr2_2:65478474-65478493 | None:intergenic | 40.0% | |
| ! | GAACACTCCAACCTGAATTT+TGG | - | chr2_2:65478578-65478597 | None:intergenic | 40.0% |
| CGCTTTACCAGAATTCTAAC+TGG | - | chr2_2:65478655-65478674 | None:intergenic | 40.0% | |
| GTTCTACGTGAATGTTGACA+AGG | + | chr2_2:65478705-65478724 | Msa0265250:CDS | 40.0% | |
| TGAATGTTGACAAGGAAGAG+TGG | + | chr2_2:65478713-65478732 | Msa0265250:CDS | 40.0% | |
| GTGTGATCTTTATGAGACTC+TGG | + | chr2_2:65478750-65478769 | Msa0265250:CDS | 40.0% | |
| ! | TCTCATTACCACTGACCTTT+TGG | + | chr2_2:65478936-65478955 | Msa0265250:CDS | 40.0% |
| TTGCTGAACATCAATACCAC+GGG | - | chr2_2:65478962-65478981 | None:intergenic | 40.0% | |
| CTTGCTGAACATCAATACCA+CGG | - | chr2_2:65478963-65478982 | None:intergenic | 40.0% | |
| !!! | AGATAGTTTTCAGGTTGGGT+AGG | - | chr2_2:65479012-65479031 | None:intergenic | 40.0% |
| !!! | GATGGAGATAGTTTTCAGGT+TGG | - | chr2_2:65479017-65479036 | None:intergenic | 40.0% |
| TGCTATCAACTTCGTCACAT+TGG | + | chr2_2:65479074-65479093 | Msa0265250:CDS | 40.0% | |
| ATTGGAAGATGCAAGAATGC+TGG | + | chr2_2:65479092-65479111 | Msa0265250:CDS | 40.0% | |
| GTTCTTTGTTAAGTCATCGG+GGG | + | chr2_2:65479196-65479215 | Msa0265250:three_prime_UTR | 40.0% | |
| TTCTTTGTTAAGTCATCGGG+GGG | + | chr2_2:65479197-65479216 | Msa0265250:three_prime_UTR | 40.0% | |
| TTAGGGTTTCCCAAACTCCT+CGG | - | chr2_2:65476299-65476318 | None:intergenic | 45.0% | |
| GAGATACGTATACCTGCTTG+TGG | - | chr2_2:65476377-65476396 | None:intergenic | 45.0% | |
| TATAGCCCCATGCTTGTCAT+TGG | + | chr2_2:65477579-65477598 | Msa0265250:intron | 45.0% | |
| TCACACATGGTATGCTAGTG+AGG | - | chr2_2:65477823-65477842 | None:intergenic | 45.0% | |
| AGCCATCTGCAATACAGCAA+AGG | + | chr2_2:65477873-65477892 | Msa0265250:CDS | 45.0% | |
| GCCATCTGCAATACAGCAAA+GGG | + | chr2_2:65477874-65477893 | Msa0265250:CDS | 45.0% | |
| CCATCTGCAATACAGCAAAG+GGG | + | chr2_2:65477875-65477894 | Msa0265250:CDS | 45.0% | |
| GCAGCAGCTTGATTATGGTT+TGG | + | chr2_2:65477985-65478004 | Msa0265250:CDS | 45.0% | |
| !! | TTATGGTTTGGTTCAGTGCC+AGG | + | chr2_2:65477997-65478016 | Msa0265250:CDS | 45.0% |
| !!! | TTTGGTTTTGGCCCCAACAA+GGG | + | chr2_2:65478021-65478040 | Msa0265250:CDS | 45.0% |
| !! | GAGAAGGTTATGAGAGCACT+TGG | + | chr2_2:65478061-65478080 | Msa0265250:CDS | 45.0% |
| ! | AGAGCACTTGGTGATTACCT+TGG | + | chr2_2:65478073-65478092 | Msa0265250:CDS | 45.0% |
| AAGGTTCATGCTTGTGTTGG+TGG | + | chr2_2:65478100-65478119 | Msa0265250:CDS | 45.0% | |
| GATCAGCGTATTCTCCAAAC+TGG | + | chr2_2:65478139-65478158 | Msa0265250:CDS | 45.0% | |
| CAACAACATGGACACCAGTT+TGG | - | chr2_2:65478156-65478175 | None:intergenic | 45.0% | |
| ACTGGTGTCCATGTTGTTGT+TGG | + | chr2_2:65478157-65478176 | Msa0265250:CDS | 45.0% | |
| !! | CAGGAGTACCAACAACAACA+TGG | - | chr2_2:65478168-65478187 | None:intergenic | 45.0% |
| ! | CATGTTGTTGTTGGTACTCC+TGG | + | chr2_2:65478166-65478185 | Msa0265250:CDS | 45.0% |
| GCTGATGAAATGCTTTCACG+TGG | + | chr2_2:65478259-65478278 | Msa0265250:CDS | 45.0% | |
| ! | ACTCCAACCTGAATTTTGGG+TGG | - | chr2_2:65478574-65478593 | None:intergenic | 45.0% |
| CGTGATGAATTGACCCTTGA+GGG | + | chr2_2:65478673-65478692 | Msa0265250:CDS | 45.0% | |
| GAACTGCTTGATACCCTCAA+GGG | - | chr2_2:65478689-65478708 | None:intergenic | 45.0% | |
| AGAACTGCTTGATACCCTCA+AGG | - | chr2_2:65478690-65478709 | None:intergenic | 45.0% | |
| ! | TTTTGTGAACACAAGGCGCA+AGG | + | chr2_2:65478792-65478811 | Msa0265250:CDS | 45.0% |
| !! | GTTTTGGTCCATGTCTCCAT+GGG | - | chr2_2:65478869-65478888 | None:intergenic | 45.0% |
| !!! | TGTTTTGGTCCATGTCTCCA+TGG | - | chr2_2:65478870-65478889 | None:intergenic | 45.0% |
| TGATGTTCAGCAAGTGTCTC+TGG | + | chr2_2:65478969-65478988 | Msa0265250:CDS | 45.0% | |
| !!! | AGTGGGCGTTTTGGAAGAAA+AGG | + | chr2_2:65479048-65479067 | Msa0265250:CDS | 45.0% |
| !!! | TTTTTTTTTTTTTGTAAATT+TGG | + | chr2_2:65476820-65476839 | Msa0265250:intron | 5.0% |
| CACTCTTCCCTTCAACTCCA+CGG | + | chr2_2:65476266-65476285 | Msa0265250:five_prime_UTR | 50.0% | |
| ! | TCTGGGGATGCCTTTGTTGT+TGG | + | chr2_2:65476948-65476967 | Msa0265250:intron | 50.0% |
| ! | AGTCATGGCAGGTTTAGCTC+CGG | + | chr2_2:65477046-65477065 | Msa0265250:intron | 50.0% |
| ! | CCCCTTTGCTGTATTGCAGA+TGG | - | chr2_2:65477878-65477897 | None:intergenic | 50.0% |
| AAGACAGCGACGTTCTGTTC+TGG | + | chr2_2:65477956-65477975 | Msa0265250:CDS | 50.0% | |
| ! | TTTGGTTCAGTGCCAGGCTT+TGG | + | chr2_2:65478003-65478022 | Msa0265250:CDS | 50.0% |
| !! | TCAGTGCCAGGCTTTGGTTT+TGG | + | chr2_2:65478009-65478028 | Msa0265250:CDS | 50.0% |
| !!! | CTTTGGTTTTGGCCCCAACA+AGG | + | chr2_2:65478020-65478039 | Msa0265250:CDS | 50.0% |
| AGCATGTCAAACACACGTCC+AGG | - | chr2_2:65478187-65478206 | None:intergenic | 50.0% | |
| TGCTGCGAAGACAGTCTCTT+CGG | + | chr2_2:65478203-65478222 | Msa0265250:CDS | 50.0% | |
| TTCACGTGGTTTCAAGGACC+AGG | + | chr2_2:65478273-65478292 | Msa0265250:CDS | 50.0% | |
| !! | GAATTTTGGGTGGCAGCAAC+TGG | - | chr2_2:65478564-65478583 | None:intergenic | 50.0% |
| GTTGCTGCCACCCAAAATTC+AGG | + | chr2_2:65478564-65478583 | Msa0265250:CDS | 50.0% | |
| CTGCCACCCAAAATTCAGGT+TGG | + | chr2_2:65478568-65478587 | Msa0265250:CDS | 50.0% | |
| GCGTGATGAATTGACCCTTG+AGG | + | chr2_2:65478672-65478691 | Msa0265250:CDS | 50.0% | |
| ATCATGCGTGAATTCCGCTC+TGG | + | chr2_2:65478901-65478920 | Msa0265250:CDS | 50.0% | |
| CATCAATACCACGGGCCAAA+AGG | - | chr2_2:65478954-65478973 | None:intergenic | 50.0% | |
| TCCATCGTATTGGGCGAAGT+GGG | + | chr2_2:65479031-65479050 | Msa0265250:CDS | 50.0% | |
| ATCTGCGCCGTGGAGTTGAA+GGG | - | chr2_2:65476276-65476295 | None:intergenic | 55.0% | |
| TCTTCGCTCACTCCACAAGC+AGG | + | chr2_2:65476362-65476381 | Msa0265250:five_prime_UTR | 55.0% | |
| ! | ATGGCAGGTTTAGCTCCGGA+AGG | + | chr2_2:65477050-65477069 | Msa0265250:CDS | 55.0% |
| GGGTCTCGATGTGATTCAGC+AGG | + | chr2_2:65477916-65477935 | Msa0265250:CDS | 55.0% | |
| GTGATTCAGCAGGCTCAGTC+AGG | + | chr2_2:65477926-65477945 | Msa0265250:CDS | 55.0% | |
| TTGGGGCCAAAACCAAAGCC+TGG | - | chr2_2:65478018-65478037 | None:intergenic | 55.0% | |
| GCTGGCACAGCAGATTGAGA+AGG | + | chr2_2:65478045-65478064 | Msa0265250:CDS | 55.0% | |
| TGGTGGCACTAGTGTTCGTG+AGG | + | chr2_2:65478117-65478136 | Msa0265250:CDS | 55.0% | |
| CTCTGCTACAATGCCTCCAG+AGG | + | chr2_2:65478597-65478616 | Msa0265250:CDS | 55.0% | |
| TACAATGCCTCCAGAGGCTC+TGG | + | chr2_2:65478603-65478622 | Msa0265250:CDS | 55.0% | |
| CTTGTGATCTCCAGAGCCTC+TGG | - | chr2_2:65478616-65478635 | None:intergenic | 55.0% | |
| !! | CAGAGGCTCTGGAGATCACA+AGG | + | chr2_2:65478614-65478633 | Msa0265250:CDS | 55.0% |
| TGTGAACACAAGGCGCAAGG+TGG | + | chr2_2:65478795-65478814 | Msa0265250:CDS | 55.0% | |
| TGGCTCACTGACAAGATGCG+AGG | + | chr2_2:65478820-65478839 | Msa0265250:CDS | 55.0% | |
| CATGGGTGGCTGAGACAGTA+TGG | - | chr2_2:65478852-65478871 | None:intergenic | 55.0% | |
| CATACTGTCTCAGCCACCCA+TGG | + | chr2_2:65478850-65478869 | Msa0265250:CDS | 55.0% | |
| TTGGTCCATGTCTCCATGGG+TGG | - | chr2_2:65478866-65478885 | None:intergenic | 55.0% | |
| GAACTCGAGAAGAGCCAGAG+CGG | - | chr2_2:65478918-65478937 | None:intergenic | 55.0% | |
| CTCCATCGTATTGGGCGAAG+TGG | + | chr2_2:65479030-65479049 | Msa0265250:CDS | 55.0% | |
| ! | ATTGGGCGAAGTGGGCGTTT+TGG | + | chr2_2:65479039-65479058 | Msa0265250:CDS | 55.0% |
| GATCTGCGCCGTGGAGTTGA+AGG | - | chr2_2:65476277-65476296 | None:intergenic | 60.0% | |
| GGCGCAGATCCGAGGAGTTT+GGG | + | chr2_2:65476287-65476306 | Msa0265250:five_prime_UTR | 60.0% | |
| CAGCAGGCTCAGTCAGGAAC+TGG | + | chr2_2:65477932-65477951 | Msa0265250:CDS | 60.0% | |
| TTTGGCCCCAACAAGGGAGC+TGG | + | chr2_2:65478027-65478046 | Msa0265250:CDS | 60.0% | |
| CTGTGCCAGCTCCCTTGTTG+GGG | - | chr2_2:65478035-65478054 | None:intergenic | 60.0% | |
| GCTGTGCCAGCTCCCTTGTT+GGG | - | chr2_2:65478036-65478055 | None:intergenic | 60.0% | |
| TGCTGTGCCAGCTCCCTTGT+TGG | - | chr2_2:65478037-65478056 | None:intergenic | 60.0% | |
| GTGATCTCCAGAGCCTCTGG+AGG | - | chr2_2:65478613-65478632 | None:intergenic | 60.0% | |
| ACACAAGGCGCAAGGTGGAC+TGG | + | chr2_2:65478800-65478819 | Msa0265250:CDS | 60.0% | |
| CTCAGCCACCCATGGAGACA+TGG | + | chr2_2:65478858-65478877 | Msa0265250:CDS | 60.0% | |
| ! | ACCACTGACCTTTTGGCCCG+TGG | + | chr2_2:65478943-65478962 | Msa0265250:CDS | 60.0% |
| ACCACGGGCCAAAAGGTCAG+TGG | - | chr2_2:65478947-65478966 | None:intergenic | 60.0% | |
| GCCCACTTCGCCCAATACGA+TGG | - | chr2_2:65479035-65479054 | None:intergenic | 60.0% | |
| AACTCCACGGCGCAGATCCG+AGG | + | chr2_2:65476279-65476298 | Msa0265250:five_prime_UTR | 65.0% | |
| AACTCCTCGGATCTGCGCCG+TGG | - | chr2_2:65476286-65476305 | None:intergenic | 65.0% | |
| CGGCGCAGATCCGAGGAGTT+TGG | + | chr2_2:65476286-65476305 | Msa0265250:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 65476190 | 65479484 | 65476190 | ID=Msa0265250;Name=Msa0265250 |
| chr2_2 | mRNA | 65476190 | 65479484 | 65476190 | ID=Msa0265250-mRNA-1;Parent=Msa0265250;Name=Msa0265250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=196|1|1|1|0.75|0.6|5|302|413 |
| chr2_2 | exon | 65476190 | 65476383 | 65476190 | ID=Msa0265250-mRNA-1:exon:20546;Parent=Msa0265250-mRNA-1 |
| chr2_2 | exon | 65477048 | 65477117 | 65477048 | ID=Msa0265250-mRNA-1:exon:20547;Parent=Msa0265250-mRNA-1 |
| chr2_2 | exon | 65477197 | 65477303 | 65477197 | ID=Msa0265250-mRNA-1:exon:20548;Parent=Msa0265250-mRNA-1 |
| chr2_2 | exon | 65477864 | 65478294 | 65477864 | ID=Msa0265250-mRNA-1:exon:20549;Parent=Msa0265250-mRNA-1 |
| chr2_2 | exon | 65478547 | 65479484 | 65478547 | ID=Msa0265250-mRNA-1:exon:20550;Parent=Msa0265250-mRNA-1 |
| chr2_2 | five_prime_UTR | 65476190 | 65476383 | 65476190 | ID=Msa0265250-mRNA-1:five_prime_utr;Parent=Msa0265250-mRNA-1 |
| chr2_2 | five_prime_UTR | 65477048 | 65477049 | 65477048 | ID=Msa0265250-mRNA-1:five_prime_utr;Parent=Msa0265250-mRNA-1 |
| chr2_2 | CDS | 65477050 | 65477117 | 65477050 | ID=Msa0265250-mRNA-1:cds;Parent=Msa0265250-mRNA-1 |
| chr2_2 | CDS | 65477197 | 65477303 | 65477197 | ID=Msa0265250-mRNA-1:cds;Parent=Msa0265250-mRNA-1 |
| chr2_2 | CDS | 65477864 | 65478294 | 65477864 | ID=Msa0265250-mRNA-1:cds;Parent=Msa0265250-mRNA-1 |
| chr2_2 | CDS | 65478547 | 65479182 | 65478547 | ID=Msa0265250-mRNA-1:cds;Parent=Msa0265250-mRNA-1 |
| chr2_2 | three_prime_UTR | 65479183 | 65479484 | 65479183 | ID=Msa0265250-mRNA-1:three_prime_utr;Parent=Msa0265250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
