Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091290 | XP_013447808.1 | 96.892 | 547 | 5 | 1 | 1 | 547 | 1 | 535 | 0.0 | 1080 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091290 | sp|Q9M888|TCPZA_ARATH | 88.483 | 547 | 51 | 1 | 1 | 547 | 1 | 535 | 0.0 | 996 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091290 | A0A072TVM3 | 96.892 | 547 | 5 | 1 | 1 | 547 | 1 | 535 | 0.0 | 1080 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016710 | Msa1091290 | 0.801628 | 8.231723e-49 | -8.615850e-47 |
| Msa0021290 | Msa1091290 | 0.814054 | 1.873110e-51 | -8.615850e-47 |
| Msa0021320 | Msa1091290 | 0.829798 | 4.207061e-55 | -8.615850e-47 |
| Msa0040220 | Msa1091290 | 0.833148 | 6.296978e-56 | -8.615850e-47 |
| Msa0648620 | Msa1091290 | 0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0701890 | Msa1091290 | 0.861422 | 1.037556e-63 | -8.615850e-47 |
| Msa0790450 | Msa1091290 | 0.818506 | 1.891838e-52 | -8.615850e-47 |
| Msa0192050 | Msa1091290 | 0.873103 | 1.904753e-67 | -8.615850e-47 |
| Msa0373830 | Msa1091290 | 0.835869 | 1.305362e-56 | -8.615850e-47 |
| Msa0388250 | Msa1091290 | 0.836114 | 1.130889e-56 | -8.615850e-47 |
| Msa0426250 | Msa1091290 | 0.805770 | 1.136846e-49 | -8.615850e-47 |
| Msa0474570 | Msa1091290 | 0.809364 | 1.963056e-50 | -8.615850e-47 |
| Msa0475810 | Msa1091290 | 0.833658 | 4.698262e-56 | -8.615850e-47 |
| Msa0982940 | Msa1091290 | 0.825323 | 4.989581e-54 | -8.615850e-47 |
| Msa1004780 | Msa1091290 | 0.817789 | 2.747808e-52 | -8.615850e-47 |
| Msa1047020 | Msa1091290 | 0.837059 | 6.498270e-57 | -8.615850e-47 |
| Msa1078980 | Msa1091290 | 0.810316 | 1.224874e-50 | -8.615850e-47 |
| Msa1089220 | Msa1091290 | 0.827781 | 1.294514e-54 | -8.615850e-47 |
| Msa1091290 | Msa1169180 | 0.803284 | 3.751393e-49 | -8.615850e-47 |
| Msa1091290 | Msa1218610 | 0.804263 | 2.349607e-49 | -8.615850e-47 |
| Msa1091290 | Msa1278130 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa1091290 | Msa1364110 | 0.812689 | 3.737121e-51 | -8.615850e-47 |
| Msa1091290 | Msa1426120 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa1091290 | Msa1444240 | 0.818880 | 1.555919e-52 | -8.615850e-47 |
| Msa1091290 | Msa1450560 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0265250 | Msa1091290 | 0.829281 | 5.621087e-55 | -8.615850e-47 |
| Msa0312740 | Msa1091290 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0532050 | Msa1091290 | 0.819631 | 1.049610e-52 | -8.615850e-47 |
| Msa0532160 | Msa1091290 | 0.864862 | 8.961203e-65 | -8.615850e-47 |
| Msa0860860 | Msa1091290 | 0.807819 | 4.194529e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091290 | MtrunA17_Chr7g0214841 | 96.892 | 547 | 5 | 1 | 1 | 547 | 1 | 535 | 0.0 | 1080 |
| Msa1091290 | MtrunA17_Chr2g0282161 | 26.063 | 541 | 356 | 12 | 20 | 546 | 22 | 532 | 1.19e-60 | 209 |
| Msa1091290 | MtrunA17_Chr7g0241881 | 29.828 | 523 | 323 | 12 | 26 | 537 | 27 | 516 | 7.85e-59 | 204 |
| Msa1091290 | MtrunA17_Chr7g0272821 | 29.480 | 519 | 332 | 9 | 25 | 537 | 26 | 516 | 1.44e-58 | 203 |
| Msa1091290 | MtrunA17_Chr3g0123341 | 28.843 | 527 | 343 | 10 | 18 | 537 | 29 | 530 | 3.58e-56 | 197 |
| Msa1091290 | MtrunA17_Chr8g0380331 | 26.071 | 537 | 352 | 9 | 22 | 538 | 24 | 535 | 4.13e-52 | 186 |
| Msa1091290 | MtrunA17_Chr5g0440381 | 25.698 | 537 | 348 | 10 | 19 | 538 | 25 | 527 | 3.76e-48 | 176 |
| Msa1091290 | MtrunA17_Chr6g0461541 | 25.093 | 538 | 359 | 13 | 18 | 546 | 22 | 524 | 3.62e-35 | 139 |
| Msa1091290 | MtrunA17_Chr1g0160221 | 23.962 | 530 | 366 | 11 | 18 | 539 | 25 | 525 | 5.92e-35 | 138 |
| Msa1091290 | MtrunA17_Chr3g0139481 | 23.563 | 522 | 315 | 10 | 22 | 537 | 29 | 472 | 3.40e-32 | 129 |
| Msa1091290 | MtrunA17_Chr1g0196761 | 23.105 | 541 | 343 | 18 | 29 | 537 | 54 | 553 | 8.98e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091290 | AT3G02530.1 | 88.483 | 547 | 51 | 1 | 1 | 547 | 1 | 535 | 0.0 | 996 |
| Msa1091290 | AT5G16070.1 | 89.031 | 547 | 47 | 2 | 1 | 547 | 1 | 534 | 0.0 | 994 |
| Msa1091290 | AT1G24510.1 | 30.740 | 527 | 333 | 10 | 18 | 537 | 29 | 530 | 5.69e-63 | 216 |
| Msa1091290 | AT5G26360.1 | 25.641 | 546 | 360 | 12 | 16 | 546 | 18 | 532 | 1.86e-55 | 196 |
| Msa1091290 | AT3G20050.1 | 26.208 | 538 | 350 | 9 | 22 | 538 | 24 | 535 | 9.74e-52 | 186 |
| Msa1091290 | AT1G24510.3 | 29.184 | 490 | 315 | 10 | 55 | 537 | 13 | 477 | 7.99e-51 | 181 |
| Msa1091290 | AT5G20890.1 | 27.514 | 527 | 348 | 9 | 25 | 545 | 26 | 524 | 1.71e-50 | 182 |
| Msa1091290 | AT3G18190.1 | 26.667 | 525 | 352 | 10 | 22 | 537 | 33 | 533 | 1.73e-48 | 176 |
| Msa1091290 | AT1G24510.2 | 28.810 | 479 | 309 | 10 | 66 | 537 | 1 | 454 | 7.78e-47 | 170 |
| Msa1091290 | AT3G11830.2 | 26.257 | 537 | 347 | 10 | 17 | 538 | 23 | 525 | 1.50e-45 | 169 |
| Msa1091290 | AT3G11830.1 | 25.981 | 535 | 353 | 9 | 17 | 538 | 23 | 527 | 3.60e-45 | 167 |
| Msa1091290 | AT3G03960.1 | 25.331 | 529 | 352 | 12 | 22 | 539 | 32 | 528 | 3.00e-35 | 139 |
Find 137 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCACAATCTTGATTAA+AGG | 0.165518 | 7_3:-6602415 | Msa1091290:intron |
| CCTGCCCAACCCAGGCATTC+AGG | 0.223982 | 7_3:+6602505 | None:intergenic |
| ACCCTCCATTTGAGGGTCTA+TGG | 0.226984 | 7_3:+6600860 | None:intergenic |
| TCATAATAGCCGTTGGATTC+TGG | 0.236868 | 7_3:+6605350 | None:intergenic |
| AGAAGCAATTGATCTGTTTA+TGG | 0.251737 | 7_3:-6604123 | Msa1091290:CDS |
| CAATTGCTTCTTCGGGCTTT+CGG | 0.277127 | 7_3:+6604135 | None:intergenic |
| CTATGGGCTCTCCACTGTTT+TGG | 0.277668 | 7_3:+6600877 | None:intergenic |
| ATCAGGCTTGTTGGTGGTTC+TGG | 0.280050 | 7_3:-6607124 | Msa1091290:intron |
| AAACATGGAGCGATTGGTTT+TGG | 0.281624 | 7_3:-6602569 | Msa1091290:CDS |
| TTGTTCAGAACTTCGGCGTT+AGG | 0.290610 | 7_3:+6607321 | None:intergenic |
| AACAGATCAATTGCTTCTTC+GGG | 0.317853 | 7_3:+6604128 | None:intergenic |
| AAACAGATCAATTGCTTCTT+CGG | 0.322370 | 7_3:+6604127 | None:intergenic |
| TGACTTGACCCCTGAATGCC+TGG | 0.322527 | 7_3:-6602515 | Msa1091290:CDS |
| ACTTCTACTGTCCTCTTCAT+TGG | 0.323741 | 7_3:-6605280 | Msa1091290:CDS |
| CGACAAAGAGATTCTCAAAA+TGG | 0.328490 | 7_3:-6604501 | Msa1091290:CDS |
| CTTCTACTGTCCTCTTCATT+GGG | 0.335093 | 7_3:-6605279 | Msa1091290:CDS |
| ACAAAATTGCTATCATTATC+AGG | 0.335253 | 7_3:+6602927 | None:intergenic |
| AGATGTGATTATTGCCCTTA+AGG | 0.341934 | 7_3:-6601050 | Msa1091290:intron |
| TTTGTCATCATCAACCAAAA+AGG | 0.363360 | 7_3:-6602909 | Msa1091290:CDS |
| GACCCCTGAATGCCTGGGTT+GGG | 0.363612 | 7_3:-6602509 | Msa1091290:CDS |
| TCTGCACGTCGCTTCATGTC+AGG | 0.371322 | 7_3:+6603927 | None:intergenic |
| AGCAATTGAGATGCTATAAC+TGG | 0.379506 | 7_3:+6600194 | None:intergenic |
| TATAGCATCTCAATTGCTAT+TGG | 0.381027 | 7_3:-6600189 | Msa1091290:CDS |
| TGCTGGGTTGCCTAGGTTGA+GGG | 0.390764 | 7_3:-6603978 | Msa1091290:intron |
| AATCAAGATTGTGCAAGAAA+AGG | 0.393989 | 7_3:+6602420 | None:intergenic |
| TTAAAAGAAGCATACCTTAA+GGG | 0.396817 | 7_3:+6601036 | None:intergenic |
| ATCAAGATTGTGCAAGAAAA+GGG | 0.396968 | 7_3:+6602421 | None:intergenic |
| TTGAGCTATCGTGTGGTCAT+TGG | 0.398725 | 7_3:+6602231 | None:intergenic |
| GAGGGTCTCGTCCTTGATCA+TGG | 0.404962 | 7_3:-6603960 | Msa1091290:CDS |
| CATCCACGTGTATTGGTTGA+TGG | 0.406867 | 7_3:-6604599 | Msa1091290:CDS |
| CATGACAGAGGGAATATTGT+TGG | 0.407042 | 7_3:-6600906 | Msa1091290:CDS |
| TCGCTTCATGTCAGGGTGTC+GGG | 0.419263 | 7_3:+6603935 | None:intergenic |
| TGAGCTATCGTGTGGTCATT+GGG | 0.419501 | 7_3:+6602232 | None:intergenic |
| CCTGAATGCCTGGGTTGGGC+AGG | 0.426320 | 7_3:-6602505 | Msa1091290:CDS |
| CTGCCCAACCCAGGCATTCA+GGG | 0.429900 | 7_3:+6602506 | None:intergenic |
| TGACCCCTGAATGCCTGGGT+TGG | 0.430026 | 7_3:-6602510 | Msa1091290:CDS |
| TTCAAGACTCCTGTTGTAAT+GGG | 0.436558 | 7_3:-6604533 | Msa1091290:CDS |
| CGCCGATTTGTTCAGAACTT+CGG | 0.437959 | 7_3:+6607314 | None:intergenic |
| CTAAGCTTTCTTAATGATCC+AGG | 0.447266 | 7_3:-6602256 | Msa1091290:CDS |
| AGCATCTCAATTGCTATTGG+TGG | 0.452107 | 7_3:-6600186 | Msa1091290:CDS |
| CCCTCCATTTGAGGGTCTAT+GGG | 0.452241 | 7_3:+6600861 | None:intergenic |
| GTTCAAGACTCCTGTTGTAA+TGG | 0.453647 | 7_3:-6604534 | Msa1091290:CDS |
| GTCAAAAGAAATAAAGCTAA+TGG | 0.458482 | 7_3:+6600077 | None:intergenic |
| TGCTAGGACAGCGGTTGCAC+AGG | 0.460244 | 7_3:-6605326 | Msa1091290:CDS |
| TGTTCAGAACTTCGGCGTTA+GGG | 0.466076 | 7_3:+6607322 | None:intergenic |
| TTCTCCTCTTTGCTCTGCGA+AGG | 0.466938 | 7_3:+6602590 | None:intergenic |
| GGCTCAGCACCCATTACAAC+AGG | 0.467685 | 7_3:+6604524 | None:intergenic |
| GTCGCTTCATGTCAGGGTGT+CGG | 0.468131 | 7_3:+6603934 | None:intergenic |
| TGGAAATGAAGAAGAGAAAG+CGG | 0.468460 | 7_3:+6607429 | None:intergenic |
| AACAACATGCTTAGATGCTT+AGG | 0.468672 | 7_3:+6599772 | None:intergenic |
| AAATCAAATCTCGGTCCTAA+AGG | 0.479532 | 7_3:-6607243 | Msa1091290:CDS |
| GATATTAAACTCACTAAAGA+TGG | 0.482698 | 7_3:-6607100 | Msa1091290:CDS |
| ATGCCGTCCGTGATGGTTTG+AGG | 0.483324 | 7_3:-6602201 | Msa1091290:CDS |
| GAAGTTAAGAAAACTGTTCA+AGG | 0.488692 | 7_3:-6601249 | Msa1091290:CDS |
| GACAACAGATTCATCTTCAA+TGG | 0.489255 | 7_3:+6602165 | None:intergenic |
| TATGAATAGTCTGCACTGAA+TGG | 0.489452 | 7_3:-6599845 | Msa1091290:three_prime_UTR |
| CATCGTTGGACATGCTTGCA+AGG | 0.489949 | 7_3:-6602875 | Msa1091290:CDS |
| TGAAGAGAAATATACATTTG+TGG | 0.490042 | 7_3:-6602458 | Msa1091290:CDS |
| TGCCGTCCGTGATGGTTTGA+GGG | 0.490496 | 7_3:-6602200 | Msa1091290:CDS |
| TATGAATGAATCAGGCTTGT+TGG | 0.499941 | 7_3:-6607133 | Msa1091290:intron |
| AACATCTTGTAAACCCTTAG+CGG | 0.500743 | 7_3:+6607269 | None:intergenic |
| GAGGAGAAACATGGAGCGAT+TGG | 0.503797 | 7_3:-6602575 | Msa1091290:CDS |
| TTGAAACAGCGTGCACAACT+TGG | 0.505401 | 7_3:-6601145 | Msa1091290:intron |
| CTGCACGTCGCTTCATGTCA+GGG | 0.505991 | 7_3:+6603928 | None:intergenic |
| TCTCCTCTTTGCTCTGCGAA+GGG | 0.509155 | 7_3:+6602591 | None:intergenic |
| AAGACACTTGCTGAAAACTC+TGG | 0.514511 | 7_3:-6601085 | Msa1091290:CDS |
| GTAAGAAAGAACGTCTAAGT+TGG | 0.515214 | 7_3:+6600128 | None:intergenic |
| GGTTGTAGCTGAAAGGCGTC+AGG | 0.521576 | 7_3:-6603139 | Msa1091290:CDS |
| CAATTCAAAAGAGAAGCTTC+AGG | 0.521718 | 7_3:+6600106 | None:intergenic |
| AATCATTGAACTGAAAAGAA+AGG | 0.521841 | 7_3:-6603097 | Msa1091290:intron |
| AAGCGTCAAATCATTAACTC+AGG | 0.523435 | 7_3:-6600816 | Msa1091290:CDS |
| ATGAATATCAATGCCGCTAA+GGG | 0.523845 | 7_3:-6607282 | Msa1091290:CDS |
| GACTTGACCCCTGAATGCCT+GGG | 0.524632 | 7_3:-6602514 | Msa1091290:CDS |
| TGCTGAACAGAGAGAGGCTA+TGG | 0.524727 | 7_3:-6603160 | Msa1091290:CDS |
| ATTAATGTAGTAGATCTAGT+TGG | 0.524958 | 7_3:-6599909 | Msa1091290:three_prime_UTR |
| AGGTATGCATCCACGTGTAT+TGG | 0.529801 | 7_3:-6604606 | Msa1091290:CDS |
| CGCCGAAGTTCTGAACAAAT+CGG | 0.534307 | 7_3:-6607316 | Msa1091290:CDS |
| GAGAAGAGTGAAGAATGAAG+TGG | 0.537046 | 7_3:+6607409 | None:intergenic |
| GTGGATGAAGTAATTCGTGC+TGG | 0.537192 | 7_3:-6600167 | Msa1091290:CDS |
| ATTTGATGTTGACACACGCT+TGG | 0.538547 | 7_3:-6604075 | Msa1091290:intron |
| AGAGCCCATAGACCCTCAAA+TGG | 0.543550 | 7_3:-6600865 | Msa1091290:CDS |
| TTGCAAGCATGTCCAACGAT+GGG | 0.544621 | 7_3:+6602877 | None:intergenic |
| AAAATCCACCTTTGTCCTCA+CGG | 0.544703 | 7_3:+6604466 | None:intergenic |
| TATCTCTTGAGTATGAAAAG+AGG | 0.548265 | 7_3:-6603878 | Msa1091290:intron |
| GATGTTCTTAAATCAAATCT+CGG | 0.550194 | 7_3:-6607252 | Msa1091290:CDS |
| CAACGGCTATTATGATTGCT+AGG | 0.550728 | 7_3:-6605342 | Msa1091290:CDS |
| ATTAAAGATGCCGTCCGTGA+TGG | 0.553606 | 7_3:-6602208 | Msa1091290:CDS |
| CAGAGCAAAGAGGAGAAACA+TGG | 0.556365 | 7_3:-6602584 | Msa1091290:CDS |
| GGAAATGAAGAAGAGAAAGC+GGG | 0.558827 | 7_3:+6607430 | None:intergenic |
| TGAAGATGAATCTGTTGTCT+TGG | 0.560777 | 7_3:-6602161 | Msa1091290:intron |
| TATGAATATCAATGCCGCTA+AGG | 0.563568 | 7_3:-6607283 | Msa1091290:CDS |
| TATTATGATTGCTAGGACAG+CGG | 0.565083 | 7_3:-6605335 | Msa1091290:CDS |
| CTAGCAATCATAATAGCCGT+TGG | 0.568498 | 7_3:+6605343 | None:intergenic |
| GCCCATAGACCCTCAAATGG+AGG | 0.573861 | 7_3:-6600862 | Msa1091290:CDS |
| AGGCTATGGTTGTAGCTGAA+AGG | 0.577063 | 7_3:-6603146 | Msa1091290:CDS |
| GTTGCACAGGATGACATTAG+TGG | 0.577599 | 7_3:-6605313 | Msa1091290:CDS |
| ATCGTGTGGTCATTGGGACC+TGG | 0.582494 | 7_3:+6602238 | None:intergenic |
| CTTTAATTTGAGCTATCGTG+TGG | 0.584126 | 7_3:+6602224 | None:intergenic |
| TTCGTGCTGGGCGTAACATG+CGG | 0.585794 | 7_3:-6600154 | Msa1091290:CDS |
| TCTGAGCGTTACATCGATGA+AGG | 0.585917 | 7_3:-6605241 | Msa1091290:intron |
| GAATGAATCAGGCTTGTTGG+TGG | 0.588106 | 7_3:-6607130 | Msa1091290:intron |
| CAGGATGACATTAGTGGTGA+TGG | 0.588583 | 7_3:-6605307 | Msa1091290:CDS |
| TTGGACATGCTTGCAAGGGA+AGG | 0.588595 | 7_3:-6602870 | Msa1091290:CDS |
| TTCAGGGAGAGCATGACAGA+GGG | 0.589444 | 7_3:-6600917 | Msa1091290:intron |
| CTCAAATGCTGAACAGAGAG+AGG | 0.590341 | 7_3:-6603166 | Msa1091290:CDS |
| CTTGCAAGCATGTCCAACGA+TGG | 0.590353 | 7_3:+6602876 | None:intergenic |
| GTTTACAGCCTCACCTCCAC+AGG | 0.594743 | 7_3:+6602546 | None:intergenic |
| GGTGTCGGGAACCATGATCA+AGG | 0.594859 | 7_3:+6603949 | None:intergenic |
| TCATAAGTTCCCCAATGAAG+AGG | 0.596505 | 7_3:+6605269 | None:intergenic |
| AAGTTAAGAAAACTGTTCAA+GGG | 0.601310 | 7_3:-6601248 | Msa1091290:CDS |
| TTCTACTGTCCTCTTCATTG+GGG | 0.604196 | 7_3:-6605278 | Msa1091290:CDS |
| ATCGTTGGACATGCTTGCAA+GGG | 0.605046 | 7_3:-6602874 | Msa1091290:CDS |
| TGCAAGCATGTCCAACGATG+GGG | 0.606757 | 7_3:+6602878 | None:intergenic |
| TGCCCAACCCAGGCATTCAG+GGG | 0.607667 | 7_3:+6602507 | None:intergenic |
| TGCCCTCAAACCATCACGGA+CGG | 0.608668 | 7_3:+6602198 | None:intergenic |
| CCCATAGACCCTCAAATGGA+GGG | 0.611798 | 7_3:-6600861 | Msa1091290:CDS |
| GACTAATATAATTGTTGATG+CGG | 0.612152 | 7_3:-6604304 | Msa1091290:intron |
| CTTCTCAAGAAATAGAAGAG+TGG | 0.619011 | 7_3:+6604556 | None:intergenic |
| AGTAGATCTAGTTGGAAATG+TGG | 0.623400 | 7_3:-6599901 | Msa1091290:three_prime_UTR |
| TTAGTGTATGAACATGTCCT+TGG | 0.624398 | 7_3:-6602481 | Msa1091290:CDS |
| GCGTGCACAACTTGGTGTTG+AGG | 0.626670 | 7_3:-6601137 | Msa1091290:CDS |
| AGTTAAGAAAACTGTTCAAG+GGG | 0.628362 | 7_3:-6601247 | Msa1091290:intron |
| ACACTAATCCTGCCCAACCC+AGG | 0.628728 | 7_3:+6602497 | None:intergenic |
| AAGAACAACCGTGAGGACAA+AGG | 0.629455 | 7_3:-6604474 | Msa1091290:intron |
| TGGTCGAGATTATGCACATG+CGG | 0.635900 | 7_3:-6604103 | Msa1091290:CDS |
| AGCGTCAAATCATTAACTCA+GGG | 0.638491 | 7_3:-6600815 | Msa1091290:intron |
| TGGATGAAGTAATTCGTGCT+GGG | 0.643019 | 7_3:-6600166 | Msa1091290:CDS |
| TTTCAGGGAGAGCATGACAG+AGG | 0.648677 | 7_3:-6600918 | Msa1091290:intron |
| GCAAGCATGTCCAACGATGG+GGG | 0.653147 | 7_3:+6602879 | None:intergenic |
| TCACTGCCCTCAAACCATCA+CGG | 0.655296 | 7_3:+6602194 | None:intergenic |
| TTGCCCTTCGCAGAGCAAAG+AGG | 0.664074 | 7_3:-6602594 | Msa1091290:CDS |
| TCAGCAAATCCAGAATCCAA+CGG | 0.674693 | 7_3:-6605359 | Msa1091290:intron |
| ATGTATATTTCTCTTCACCA+AGG | 0.675861 | 7_3:+6602464 | None:intergenic |
| AATCCATCAACCAATACACG+TGG | 0.689768 | 7_3:+6604596 | None:intergenic |
| GTTGGTTTGAGCCAAAACAG+TGG | 0.695683 | 7_3:-6600888 | Msa1091290:CDS |
| CGAAGTTCTGAACAAATCGG+CGG | 0.699525 | 7_3:-6607313 | Msa1091290:CDS |
| TGGTAGCAAGAACAACCGTG+AGG | 0.779725 | 7_3:-6604481 | Msa1091290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATTATTTTTTTTTGTTT+TGG | - | chr7_3:6600059-6600078 | Msa1091290:three_prime_UTR | 10.0% |
| !!! | TTTGTATTAGAATTTTTATT+TGG | + | chr7_3:6603576-6603595 | None:intergenic | 10.0% |
| !! | CAAATCAAATAAATAAAATT+TGG | + | chr7_3:6606036-6606055 | None:intergenic | 10.0% |
| !!! | TATTTTTTGATATTGTTAAC+TGG | - | chr7_3:6600378-6600397 | Msa1091290:intron | 15.0% |
| !!! | ATTTTTTGATATTGTTAACT+GGG | - | chr7_3:6600379-6600398 | Msa1091290:intron | 15.0% |
| !! | AGTATAATATTATGTTTACT+TGG | - | chr7_3:6600795-6600814 | Msa1091290:intron | 15.0% |
| !! | TTTATGTTTATTTGGAAAAA+AGG | - | chr7_3:6600953-6600972 | Msa1091290:intron | 15.0% |
| !!! | CATTTTCTGAAAATTATTAT+AGG | - | chr7_3:6601229-6601248 | Msa1091290:intron | 15.0% |
| !!! | ATTTTAACATAACCATTTTA+AGG | + | chr7_3:6601379-6601398 | None:intergenic | 15.0% |
| !! | ATCGATGTAAATATTATTAA+AGG | + | chr7_3:6601760-6601779 | None:intergenic | 15.0% |
| !!! | ACTAAATTTTCATATTAACA+AGG | + | chr7_3:6602985-6603004 | None:intergenic | 15.0% |
| !!! | TAATATGAAAATTTAGTTTG+TGG | - | chr7_3:6602988-6603007 | Msa1091290:intron | 15.0% |
| !! | ATTTATAATCTACATATTCA+AGG | + | chr7_3:6603022-6603041 | None:intergenic | 15.0% |
| !!! | TTATTTTGATCTTTTACAAT+CGG | - | chr7_3:6603041-6603060 | Msa1091290:intron | 15.0% |
| !!! | AGAATTTTTATTTGGAAAAT+GGG | + | chr7_3:6603568-6603587 | None:intergenic | 15.0% |
| !!! | TAGAATTTTTATTTGGAAAA+TGG | + | chr7_3:6603569-6603588 | None:intergenic | 15.0% |
| !!! | ATTTTTATCCTTGTATATAT+TGG | - | chr7_3:6604169-6604188 | Msa1091290:intron | 15.0% |
| !! | AAATAAACAAAAATATGGAT+TGG | + | chr7_3:6605181-6605200 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAGAGAAA+AGG | + | chr7_3:6605490-6605509 | None:intergenic | 15.0% |
| !!! | ATGTAAACTTAACATATTTT+TGG | - | chr7_3:6605584-6605603 | Msa1091290:intron | 15.0% |
| !!! | AGTTGATTTAAAAATCTAAT+TGG | - | chr7_3:6605678-6605697 | Msa1091290:intron | 15.0% |
| !!! | GTTGATTTAAAAATCTAATT+GGG | - | chr7_3:6605679-6605698 | Msa1091290:intron | 15.0% |
| !! | TATTTACAACTTAAAACAAA+TGG | + | chr7_3:6605750-6605769 | None:intergenic | 15.0% |
| !!! | ATATGTACAACATAATATTT+TGG | + | chr7_3:6606964-6606983 | None:intergenic | 15.0% |
| !! | CTAAAAGCAAATAAATATGT+AGG | + | chr7_3:6600288-6600307 | None:intergenic | 20.0% |
| !!! | CTACATATTTATTTGCTTTT+AGG | - | chr7_3:6600286-6600305 | Msa1091290:intron | 20.0% |
| !! | ATAGATCACACAAAAATAAA+AGG | + | chr7_3:6600554-6600573 | None:intergenic | 20.0% |
| !! | ATATGTATATATAGACTGAA+AGG | + | chr7_3:6600590-6600609 | None:intergenic | 20.0% |
| !! | AAGTTTATTAAAACCACAAA+GGG | - | chr7_3:6600666-6600685 | Msa1091290:intron | 20.0% |
| !! | ATATTATGTTTACTTGGAAA+CGG | - | chr7_3:6600801-6600820 | Msa1091290:intron | 20.0% |
| !! | TAGAATGTAACTATATGTAT+CGG | + | chr7_3:6600838-6600857 | None:intergenic | 20.0% |
| !! | AAGACATGTTTATGTTTATT+TGG | - | chr7_3:6600945-6600964 | Msa1091290:intron | 20.0% |
| !!! | CATTTTCTCAAATTATTACT+GGG | - | chr7_3:6601083-6601102 | Msa1091290:CDS | 20.0% |
| !!! | TGATAATGATTTGAGAAAAT+GGG | + | chr7_3:6601285-6601304 | None:intergenic | 20.0% |
| !!! | TTGATAATGATTTGAGAAAA+TGG | + | chr7_3:6601286-6601305 | None:intergenic | 20.0% |
| !!! | AATGCATTTTGAAAATTTTG+TGG | - | chr7_3:6601396-6601415 | Msa1091290:intron | 20.0% |
| !! | TAAAATAAAATGCATTTCTG+CGG | - | chr7_3:6601790-6601809 | Msa1091290:intron | 20.0% |
| !!! | TGTTTTTGTTGAAAATTTTG+TGG | - | chr7_3:6601823-6601842 | Msa1091290:intron | 20.0% |
| !!! | AAGTTCAGATGATATTTTAA+TGG | - | chr7_3:6602156-6602175 | Msa1091290:intron | 20.0% |
| !!! | CTAGATTGCAAAATTTTTAT+GGG | + | chr7_3:6602289-6602308 | None:intergenic | 20.0% |
| !! | ATTAATCACAAAAACTGTAA+GGG | + | chr7_3:6602369-6602388 | None:intergenic | 20.0% |
| !! | AGTATAGGAAAAATGTAATT+TGG | - | chr7_3:6602406-6602425 | Msa1091290:intron | 20.0% |
| !! | GTATAGGAAAAATGTAATTT+GGG | - | chr7_3:6602407-6602426 | Msa1091290:intron | 20.0% |
| !! | CATTTAATCCTTCTTTAAAT+TGG | - | chr7_3:6602796-6602815 | Msa1091290:intron | 20.0% |
| !!! | TATTTTGATCTTTTACAATC+GGG | - | chr7_3:6603042-6603061 | Msa1091290:intron | 20.0% |
| !!! | AACATGTTCATTATTTTTGT+TGG | - | chr7_3:6603208-6603227 | Msa1091290:intron | 20.0% |
| !! | ACATTTGTTTATAGTAATAG+GGG | + | chr7_3:6603407-6603426 | None:intergenic | 20.0% |
| !! | GACATTTGTTTATAGTAATA+GGG | + | chr7_3:6603408-6603427 | None:intergenic | 20.0% |
| !! | TGACATTTGTTTATAGTAAT+AGG | + | chr7_3:6603409-6603428 | None:intergenic | 20.0% |
| !!! | CTAACAGTTATATTATTTTC+TGG | + | chr7_3:6604500-6604519 | None:intergenic | 20.0% |
| !!! | TTTCATTTTATTGACATTGT+TGG | - | chr7_3:6604935-6604954 | Msa1091290:intron | 20.0% |
| !!! | AGTATACATTTTTTTTCTTC+AGG | - | chr7_3:6605130-6605149 | Msa1091290:intron | 20.0% |
| !! | TGAGGAAATAAACAAAAATA+TGG | + | chr7_3:6605186-6605205 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTCTTCTTTGTA+TGG | - | chr7_3:6605445-6605464 | Msa1091290:intron | 20.0% |
| !!! | TATGGCTAAATAAGAATTTT+TGG | - | chr7_3:6605463-6605482 | Msa1091290:intron | 20.0% |
| !!! | GTCATAATTTTTTTGCAATA+AGG | - | chr7_3:6605627-6605646 | Msa1091290:intron | 20.0% |
| !!! | TTGTTTTAAGTTGTAAATAG+TGG | - | chr7_3:6605751-6605770 | Msa1091290:intron | 20.0% |
| !!! | TGTTTTAAGTTGTAAATAGT+GGG | - | chr7_3:6605752-6605771 | Msa1091290:intron | 20.0% |
| !! | TGTATTATAGACATAACAAA+TGG | - | chr7_3:6606888-6606907 | Msa1091290:intron | 20.0% |
| ! | GATGTTCTTAAATCAAATCT+CGG | - | chr7_3:6599983-6600002 | Msa1091290:three_prime_UTR | 25.0% |
| !!! | TACATTTTGATAGTTCCTTT+AGG | + | chr7_3:6600010-6600029 | None:intergenic | 25.0% |
| ! | TTATTGTGTATGAATGAATC+AGG | - | chr7_3:6600094-6600113 | Msa1091290:three_prime_UTR | 25.0% |
| ! | GATATTAAACTCACTAAAGA+TGG | - | chr7_3:6600135-6600154 | Msa1091290:exon | 25.0% |
| !!! | TAACACTCTTTTGAAAGAAA+TGG | - | chr7_3:6600158-6600177 | Msa1091290:CDS | 25.0% |
| ! | CATAGCAAAACAAATACAAA+GGG | + | chr7_3:6600203-6600222 | None:intergenic | 25.0% |
| ! | TCATAGCAAAACAAATACAA+AGG | + | chr7_3:6600204-6600223 | None:intergenic | 25.0% |
| !! | TTTCTTGAGATTGATTTCAT+TGG | + | chr7_3:6600492-6600511 | None:intergenic | 25.0% |
| ! | AAATCAATCTCAAGAAAAGA+GGG | - | chr7_3:6600495-6600514 | Msa1091290:intron | 25.0% |
| ! | GAAGTTTATTAAAACCACAA+AGG | - | chr7_3:6600665-6600684 | Msa1091290:intron | 25.0% |
| ! | AATATAAAATACACCCTTTG+TGG | + | chr7_3:6600682-6600701 | None:intergenic | 25.0% |
| !!! | TTTTTGAGGTGCTTTTTATA+TGG | + | chr7_3:6600710-6600729 | None:intergenic | 25.0% |
| !!! | AAACTTAGCTACATTTTTTG+AGG | + | chr7_3:6600724-6600743 | None:intergenic | 25.0% |
| ! | TCTAGTATGCATAATTGTTA+TGG | - | chr7_3:6600763-6600782 | Msa1091290:intron | 25.0% |
| !!! | CTATTTTCTCAATTGATAAC+CGG | - | chr7_3:6600864-6600883 | Msa1091290:CDS | 25.0% |
| ! | CCAGTAATAATTTGAGAAAA+TGG | + | chr7_3:6601085-6601104 | None:intergenic | 25.0% |
| !! | CCATTTTCTCAAATTATTAC+TGG | - | chr7_3:6601082-6601101 | Msa1091290:CDS | 25.0% |
| ! | TGCAAAGTAAACATAATCTT+CGG | + | chr7_3:6601162-6601181 | None:intergenic | 25.0% |
| ! | TTGAATGTAAATACATGTGT+CGG | + | chr7_3:6601202-6601221 | None:intergenic | 25.0% |
| ! | TGACTATGTTTACCTTAAAA+TGG | - | chr7_3:6601364-6601383 | Msa1091290:intron | 25.0% |
| !!! | TTTGTTGTTATAACAGCAAA+CGG | - | chr7_3:6601437-6601456 | Msa1091290:intron | 25.0% |
| ! | TTTGTGAGATAAGTATCTTT+AGG | - | chr7_3:6601564-6601583 | Msa1091290:intron | 25.0% |
| ! | TATTTACATCGATACAGTTA+TGG | - | chr7_3:6601767-6601786 | Msa1091290:intron | 25.0% |
| ! | TTGAATACATTGTGTTATCA+AGG | - | chr7_3:6602070-6602089 | Msa1091290:intron | 25.0% |
| ! | TGAATACATTGTGTTATCAA+GGG | - | chr7_3:6602071-6602090 | Msa1091290:intron | 25.0% |
| ! | CTATAAATGTCAAAATGAAG+AGG | + | chr7_3:6602241-6602260 | None:intergenic | 25.0% |
| !! | CCTAGATTGCAAAATTTTTA+TGG | + | chr7_3:6602290-6602309 | None:intergenic | 25.0% |
| !! | CCATAAAAATTTTGCAATCT+AGG | - | chr7_3:6602287-6602306 | Msa1091290:intron | 25.0% |
| ! | GATTAATCACAAAAACTGTA+AGG | + | chr7_3:6602370-6602389 | None:intergenic | 25.0% |
| !! | CAGTTTTTGTGATTAATCAT+TGG | - | chr7_3:6602372-6602391 | Msa1091290:intron | 25.0% |
| !! | TTGGAATAGATTTAGAGTAT+AGG | - | chr7_3:6602391-6602410 | Msa1091290:intron | 25.0% |
| !!! | TTGCATCTGAAATAAGTTTT+TGG | - | chr7_3:6602490-6602509 | Msa1091290:CDS | 25.0% |
| !!! | TGCATCTGAAATAAGTTTTT+GGG | - | chr7_3:6602491-6602510 | Msa1091290:CDS | 25.0% |
| ! | AGACACAAAACAAAACAAAA+TGG | + | chr7_3:6602553-6602572 | None:intergenic | 25.0% |
| ! | GACTAATATAATTGTTGATG+CGG | - | chr7_3:6602931-6602950 | Msa1091290:CDS | 25.0% |
| !!! | AAATTTAGTTTGTGGTCATT+TGG | - | chr7_3:6602996-6603015 | Msa1091290:intron | 25.0% |
| !! | CTTTTCAGTGAAATAAATTC+TGG | - | chr7_3:6604037-6604056 | Msa1091290:intron | 25.0% |
| ! | AATCATTGAACTGAAAAGAA+AGG | - | chr7_3:6604138-6604157 | Msa1091290:CDS | 25.0% |
| !!! | ACTATTTTTTGCAATATAGC+AGG | + | chr7_3:6604230-6604249 | None:intergenic | 25.0% |
| ! | CTGAATAAATATAAGCATGA+AGG | + | chr7_3:6604282-6604301 | None:intergenic | 25.0% |
| ! | CTTCATGCTTATATTTATTC+AGG | - | chr7_3:6604280-6604299 | Msa1091290:intron | 25.0% |
| ! | ACAAAATTGCTATCATTATC+AGG | + | chr7_3:6604311-6604330 | None:intergenic | 25.0% |
| !!! | ATTTTCTGGTTTACATCATA+CGG | + | chr7_3:6604486-6604505 | None:intergenic | 25.0% |
| ! | AATATAACTGTTAGAACACT+CGG | - | chr7_3:6604506-6604525 | Msa1091290:CDS | 25.0% |
| ! | TGAAGAGAAATATACATTTG+TGG | - | chr7_3:6604777-6604796 | Msa1091290:intron | 25.0% |
| ! | CAAAAAAATAACAGAAGGAT+CGG | + | chr7_3:6604878-6604897 | None:intergenic | 25.0% |
| ! | ATGTCAATAAAATGAAACAG+AGG | + | chr7_3:6604932-6604951 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATGTACACTAC+AGG | + | chr7_3:6605238-6605257 | None:intergenic | 25.0% |
| !!! | TAGTGTACATTTTTTTCTTC+TGG | - | chr7_3:6605239-6605258 | Msa1091290:intron | 25.0% |
| !! | AGATTAAGCATTTTGTATCA+AGG | + | chr7_3:6605361-6605380 | None:intergenic | 25.0% |
| ! | TTGATACAAAATGCTTAATC+TGG | - | chr7_3:6605360-6605379 | Msa1091290:intron | 25.0% |
| !!! | TAAAGCATTGTATTACAGTT+AGG | + | chr7_3:6605527-6605546 | None:intergenic | 25.0% |
| ! | AAAATGCTTTGCATATGTTT+AGG | - | chr7_3:6605707-6605726 | Msa1091290:intron | 25.0% |
| ! | TCTATCACAATCAACATAAA+AGG | + | chr7_3:6605891-6605910 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAAACTGTTCAA+GGG | - | chr7_3:6605987-6606006 | Msa1091290:intron | 25.0% |
| !! | TTAAAAGAAGCATACCTTAA+GGG | + | chr7_3:6606202-6606221 | None:intergenic | 25.0% |
| !! | TTTAAAAGAAGCATACCTTA+AGG | + | chr7_3:6606203-6606222 | None:intergenic | 25.0% |
| ! | ATATGAAGTAGATGATTGAT+CGG | - | chr7_3:6606267-6606286 | Msa1091290:intron | 25.0% |
| !!! | ACATTTTGACTATTTTTTGC+TGG | - | chr7_3:6606452-6606471 | Msa1091290:intron | 25.0% |
| !!! | CATTTTGACTATTTTTTGCT+GGG | - | chr7_3:6606453-6606472 | Msa1091290:intron | 25.0% |
| ! | TAGTACAATTTCATTACCAA+GGG | - | chr7_3:6606502-6606521 | Msa1091290:intron | 25.0% |
| ! | ATTATACAATTTCATTGCCA+AGG | - | chr7_3:6606696-6606715 | Msa1091290:intron | 25.0% |
| ! | TTATACAATTTCATTGCCAA+GGG | - | chr7_3:6606697-6606716 | Msa1091290:intron | 25.0% |
| !!! | TGGTGTAGTTTTTTAATTTG+AGG | + | chr7_3:6606834-6606853 | None:intergenic | 25.0% |
| !! | TGTTGTACATATGTTCTTTT+TGG | - | chr7_3:6606972-6606991 | Msa1091290:intron | 25.0% |
| ! | GTCAAAAGAAATAAAGCTAA+TGG | + | chr7_3:6607161-6607180 | None:intergenic | 25.0% |
| !! | GTCTATTATGACTGAATTTT+TGG | - | chr7_3:6607278-6607297 | Msa1091290:CDS | 25.0% |
| ! | ATTAATGTAGTAGATCTAGT+TGG | - | chr7_3:6607326-6607345 | Msa1091290:CDS | 25.0% |
| GAAATCAATCTCAAGAAAAG+AGG | - | chr7_3:6600494-6600513 | Msa1091290:intron | 30.0% | |
| ! | AATAGTAAAACTGACTTACG+TGG | - | chr7_3:6600976-6600995 | Msa1091290:intron | 30.0% |
| !!! | TTCAGTTACTTCCTTTTTTC+TGG | - | chr7_3:6601009-6601028 | Msa1091290:intron | 30.0% |
| !!! | TCAGTTACTTCCTTTTTTCT+GGG | - | chr7_3:6601010-6601029 | Msa1091290:intron | 30.0% |
| TGATAGTAAACCCAGAAAAA+AGG | + | chr7_3:6601023-6601042 | None:intergenic | 30.0% | |
| GATAACACAATGTATTCAAC+TGG | + | chr7_3:6602069-6602088 | None:intergenic | 30.0% | |
| GAATACATTGTGTTATCAAG+GGG | - | chr7_3:6602072-6602091 | Msa1091290:intron | 30.0% | |
| TTGAAAAAGATTCCATAGCA+AGG | - | chr7_3:6602329-6602348 | Msa1091290:intron | 30.0% | |
| !!! | CATGTATTTTTTTATCCGAC+AGG | + | chr7_3:6602447-6602466 | None:intergenic | 30.0% |
| ! | AGAGTGTTCGTATATATCTT+AGG | + | chr7_3:6602609-6602628 | None:intergenic | 30.0% |
| AAGATATATACGAACACTCT+AGG | - | chr7_3:6602609-6602628 | Msa1091290:intron | 30.0% | |
| !! | ATTTTGAGAATCTCTTTGTC+GGG | + | chr7_3:6602735-6602754 | None:intergenic | 30.0% |
| !! | CATTTTGAGAATCTCTTTGT+CGG | + | chr7_3:6602736-6602755 | None:intergenic | 30.0% |
| TCAACTGACCAATTTAAAGA+AGG | + | chr7_3:6602807-6602826 | None:intergenic | 30.0% | |
| CGGATGCATAAAATCTATTA+GGG | + | chr7_3:6603083-6603102 | None:intergenic | 30.0% | |
| TCGGATGCATAAAATCTATT+AGG | + | chr7_3:6603084-6603103 | None:intergenic | 30.0% | |
| AAACAGATCAATTGCTTCTT+CGG | + | chr7_3:6603111-6603130 | None:intergenic | 30.0% | |
| AGAAGCAATTGATCTGTTTA+TGG | - | chr7_3:6603112-6603131 | Msa1091290:CDS | 30.0% | |
| ACTTATAATTCACTATGTGC+TGG | - | chr7_3:6603240-6603259 | Msa1091290:intron | 30.0% | |
| CTTATAATTCACTATGTGCT+GGG | - | chr7_3:6603241-6603260 | Msa1091290:intron | 30.0% | |
| TATCTCTTGAGTATGAAAAG+AGG | - | chr7_3:6603357-6603376 | Msa1091290:intron | 30.0% | |
| AAAGAGGTAATCAACTCAAT+CGG | - | chr7_3:6603373-6603392 | Msa1091290:intron | 30.0% | |
| GTTTATAGTAATAGGGGAAA+AGG | + | chr7_3:6603401-6603420 | None:intergenic | 30.0% | |
| TATAATCAAAACAGAGGAAC+CGG | + | chr7_3:6603658-6603677 | None:intergenic | 30.0% | |
| CCTACTTATAATCAAAACAG+AGG | + | chr7_3:6603664-6603683 | None:intergenic | 30.0% | |
| !!! | CCTCTGTTTTGATTATAAGT+AGG | - | chr7_3:6603661-6603680 | Msa1091290:intron | 30.0% |
| TGATTATAAGTAGGCATATC+TGG | - | chr7_3:6603670-6603689 | Msa1091290:intron | 30.0% | |
| GATTATAAGTAGGCATATCT+GGG | - | chr7_3:6603671-6603690 | Msa1091290:intron | 30.0% | |
| ACTTCCATCATAGTATCTAA+GGG | + | chr7_3:6603916-6603935 | None:intergenic | 30.0% | |
| TACTTCCATCATAGTATCTA+AGG | + | chr7_3:6603917-6603936 | None:intergenic | 30.0% | |
| ACTTTGTATGAGACTAACAT+TGG | - | chr7_3:6604004-6604023 | Msa1091290:intron | 30.0% | |
| TGTGAGAACCAATATATACA+AGG | + | chr7_3:6604180-6604199 | None:intergenic | 30.0% | |
| TTTGTCATCATCAACCAAAA+AGG | - | chr7_3:6604326-6604345 | Msa1091290:CDS | 30.0% | |
| ACTAAAAAAGACAGACAAGT+GGG | + | chr7_3:6604447-6604466 | None:intergenic | 30.0% | |
| TACTAAAAAAGACAGACAAG+TGG | + | chr7_3:6604448-6604467 | None:intergenic | 30.0% | |
| ACACACTAAAAACATGCAAT+TGG | + | chr7_3:6604536-6604555 | None:intergenic | 30.0% | |
| AAACGATCAACAGATGAAAT+AGG | + | chr7_3:6604602-6604621 | None:intergenic | 30.0% | |
| AGGGCAATTATCTAAACAAA+AGG | + | chr7_3:6604628-6604647 | None:intergenic | 30.0% | |
| ATGTATATTTCTCTTCACCA+AGG | + | chr7_3:6604774-6604793 | None:intergenic | 30.0% | |
| ATCAAGATTGTGCAAGAAAA+GGG | + | chr7_3:6604817-6604836 | None:intergenic | 30.0% | |
| AATCAAGATTGTGCAAGAAA+AGG | + | chr7_3:6604818-6604837 | None:intergenic | 30.0% | |
| TCTTGCACAATCTTGATTAA+AGG | - | chr7_3:6604820-6604839 | Msa1091290:intron | 30.0% | |
| ! | AAGGTACATTTTTGAACACA+TGG | - | chr7_3:6604839-6604858 | Msa1091290:intron | 30.0% |
| !!! | CGATCCTTCTGTTATTTTTT+TGG | - | chr7_3:6604876-6604895 | Msa1091290:intron | 30.0% |
| TCCTCAATCAACAAAAGTTT+CGG | - | chr7_3:6605200-6605219 | Msa1091290:intron | 30.0% | |
| ! | ATGTTATTTATCCACTCCAT+AGG | - | chr7_3:6605278-6605297 | Msa1091290:CDS | 30.0% |
| ! | AAAATGCTTAATCTGGTTTC+TGG | - | chr7_3:6605367-6605386 | Msa1091290:intron | 30.0% |
| ! | AAATGCTTAATCTGGTTTCT+GGG | - | chr7_3:6605368-6605387 | Msa1091290:intron | 30.0% |
| GATTCTCAAATAGAGAGAAA+TGG | + | chr7_3:6605553-6605572 | None:intergenic | 30.0% | |
| !!! | TGCTACTAGCTTTTGATAAT+AGG | - | chr7_3:6605819-6605838 | Msa1091290:intron | 30.0% |
| !!! | GCTACTAGCTTTTGATAATA+GGG | - | chr7_3:6605820-6605839 | Msa1091290:intron | 30.0% |
| TATCCTTCAATACAGAACTT+TGG | - | chr7_3:6605859-6605878 | Msa1091290:intron | 30.0% | |
| AAACCAAAGTTCTGTATTGA+AGG | + | chr7_3:6605865-6605884 | None:intergenic | 30.0% | |
| GAAGTTAAGAAAACTGTTCA+AGG | - | chr7_3:6605986-6606005 | Msa1091290:intron | 30.0% | |
| AGTTAAGAAAACTGTTCAAG+GGG | - | chr7_3:6605988-6606007 | Msa1091290:intron | 30.0% | |
| ACGTAATACAATCACATTAG+AGG | + | chr7_3:6606243-6606262 | None:intergenic | 30.0% | |
| !!! | GTTTGCTAAATGCTTTTTCA+GGG | - | chr7_3:6606302-6606321 | Msa1091290:intron | 30.0% |
| CTAGTACAATTTCATTACCA+AGG | - | chr7_3:6606501-6606520 | Msa1091290:intron | 30.0% | |
| !! | GCGTATGTTCTTTTTAAAAG+GGG | + | chr7_3:6606942-6606961 | None:intergenic | 30.0% |
| !! | GGCGTATGTTCTTTTTAAAA+GGG | + | chr7_3:6606943-6606962 | None:intergenic | 30.0% |
| ! | TGGCGTATGTTCTTTTTAAA+AGG | + | chr7_3:6606944-6606963 | None:intergenic | 30.0% |
| TATAGCATCTCAATTGCTAT+TGG | - | chr7_3:6607046-6607065 | Msa1091290:intron | 30.0% | |
| ! | TGAAGCTTCTCTTTTGAATT+GGG | - | chr7_3:6607131-6607150 | Msa1091290:intron | 30.0% |
| !!! | TTTGTGGTTTTGTGAAACGA+CGG | + | chr7_3:6599768-6599787 | None:intergenic | 35.0% |
| !!! | TTTCTAAGGGTTTGGTTTTG+TGG | + | chr7_3:6599784-6599803 | None:intergenic | 35.0% |
| TGGAAATGAAGAAGAGAAAG+CGG | + | chr7_3:6599809-6599828 | None:intergenic | 35.0% | |
| TATGAATATCAATGCCGCTA+AGG | - | chr7_3:6599952-6599971 | Msa1091290:three_prime_UTR | 35.0% | |
| ATGAATATCAATGCCGCTAA+GGG | - | chr7_3:6599953-6599972 | Msa1091290:three_prime_UTR | 35.0% | |
| AACATCTTGTAAACCCTTAG+CGG | + | chr7_3:6599969-6599988 | None:intergenic | 35.0% | |
| AAATCAAATCTCGGTCCTAA+AGG | - | chr7_3:6599992-6600011 | Msa1091290:three_prime_UTR | 35.0% | |
| TATGAATGAATCAGGCTTGT+TGG | - | chr7_3:6600102-6600121 | Msa1091290:three_prime_UTR | 35.0% | |
| ! | TGAGATTGATTTCATTGGCA+CGG | + | chr7_3:6600487-6600506 | None:intergenic | 35.0% |
| !! | AAGTTTTGTCCATTCTCAAG+TGG | - | chr7_3:6600738-6600757 | Msa1091290:intron | 35.0% |
| CATGTCTTACACTTTGAACT+TGG | + | chr7_3:6600933-6600952 | None:intergenic | 35.0% | |
| ACAAAGAACTGACATGGATA+TGG | + | chr7_3:6601137-6601156 | None:intergenic | 35.0% | |
| CATAGTCATAGACTGTAAAG+TGG | + | chr7_3:6601352-6601371 | None:intergenic | 35.0% | |
| TATTATGATTGCTAGGACAG+CGG | - | chr7_3:6601900-6601919 | Msa1091290:intron | 35.0% | |
| !! | AGGTTGATTTTTACACAGGT+TGG | + | chr7_3:6602221-6602240 | None:intergenic | 35.0% |
| !! | GAAGAGGTTGATTTTTACAC+AGG | + | chr7_3:6602225-6602244 | None:intergenic | 35.0% |
| TAATTTGGATCACCTTGCTA+TGG | + | chr7_3:6602344-6602363 | None:intergenic | 35.0% | |
| ATAGCAAGGTGATCCAAATT+AGG | - | chr7_3:6602343-6602362 | Msa1091290:intron | 35.0% | |
| AAAACTGTAAGGGCCTAATT+TGG | + | chr7_3:6602359-6602378 | None:intergenic | 35.0% | |
| GTGAAGATAAGAAATCCTGT+CGG | - | chr7_3:6602429-6602448 | Msa1091290:CDS | 35.0% | |
| CTTCTCAAGAAATAGAAGAG+TGG | + | chr7_3:6602682-6602701 | None:intergenic | 35.0% | |
| TTCAAGACTCCTGTTGTAAT+GGG | - | chr7_3:6602702-6602721 | Msa1091290:intron | 35.0% | |
| CGACAAAGAGATTCTCAAAA+TGG | - | chr7_3:6602734-6602753 | Msa1091290:intron | 35.0% | |
| TCATACAGCTGCAAATAAGA+AGG | + | chr7_3:6602893-6602912 | None:intergenic | 35.0% | |
| AACAGATCAATTGCTTCTTC+GGG | + | chr7_3:6603110-6603129 | None:intergenic | 35.0% | |
| AACATATATGGACGGCATAT+CGG | + | chr7_3:6603529-6603548 | None:intergenic | 35.0% | |
| ACAAAAAAGAAACCCAAACG+CGG | + | chr7_3:6603774-6603793 | None:intergenic | 35.0% | |
| ! | TTTTGTTACCCAACTCAACT+TGG | - | chr7_3:6603788-6603807 | Msa1091290:intron | 35.0% |
| ! | AACTCTATCCAAGTTGAGTT+GGG | + | chr7_3:6603799-6603818 | None:intergenic | 35.0% |
| GATAGTTAATACTCTGCATC+TGG | + | chr7_3:6603894-6603913 | None:intergenic | 35.0% | |
| CTATCCCTTAGATACTATGA+TGG | - | chr7_3:6603909-6603928 | Msa1091290:CDS | 35.0% | |
| TCAACAGATGAAATAGGACA+TGG | + | chr7_3:6604596-6604615 | None:intergenic | 35.0% | |
| TTAGTGTATGAACATGTCCT+TGG | - | chr7_3:6604754-6604773 | Msa1091290:intron | 35.0% | |
| CGTGCCAAAAAAATAACAGA+AGG | + | chr7_3:6604883-6604902 | None:intergenic | 35.0% | |
| CTAAGCTTTCTTAATGATCC+AGG | - | chr7_3:6604979-6604998 | Msa1091290:intron | 35.0% | |
| !! | CTTTAATTTGAGCTATCGTG+TGG | + | chr7_3:6605014-6605033 | None:intergenic | 35.0% |
| GACAACAGATTCATCTTCAA+TGG | + | chr7_3:6605073-6605092 | None:intergenic | 35.0% | |
| TGAAGATGAATCTGTTGTCT+TGG | - | chr7_3:6605074-6605093 | Msa1091290:intron | 35.0% | |
| TCAATCAACAAAAGTTTCGG+CGG | - | chr7_3:6605203-6605222 | Msa1091290:intron | 35.0% | |
| AATTAACACAACCTATGGAG+TGG | + | chr7_3:6605292-6605311 | None:intergenic | 35.0% | |
| GAGGAAATTAACACAACCTA+TGG | + | chr7_3:6605297-6605316 | None:intergenic | 35.0% | |
| GACTGAAATTTAGCTGATTG+AGG | + | chr7_3:6605316-6605335 | None:intergenic | 35.0% | |
| GTTAGAATGTTAGACGTTTC+CGG | - | chr7_3:6605403-6605422 | Msa1091290:intron | 35.0% | |
| TCCTATTTGACTCTTATGTC+CGG | + | chr7_3:6605425-6605444 | None:intergenic | 35.0% | |
| TTAAATCAACTCGAGCATGA+GGG | + | chr7_3:6605669-6605688 | None:intergenic | 35.0% | |
| TTTAAATCAACTCGAGCATG+AGG | + | chr7_3:6605670-6605689 | None:intergenic | 35.0% | |
| CAACAAAACTATGAGGACAA+CGG | - | chr7_3:6605783-6605802 | Msa1091290:intron | 35.0% | |
| AATTTCCTCGCCAATGTTTA+GGG | - | chr7_3:6605920-6605939 | Msa1091290:intron | 35.0% | |
| ! | CGCTGTTTCAAAGTTACAAA+CGG | + | chr7_3:6606081-6606100 | None:intergenic | 35.0% |
| AGATGTGATTATTGCCCTTA+AGG | - | chr7_3:6606185-6606204 | Msa1091290:intron | 35.0% | |
| !!! | CGTTTGCTAAATGCTTTTTC+AGG | - | chr7_3:6606301-6606320 | Msa1091290:intron | 35.0% |
| CAAAAATACCCTCCATTTGA+GGG | + | chr7_3:6606385-6606404 | None:intergenic | 35.0% | |
| TCAAAAATACCCTCCATTTG+AGG | + | chr7_3:6606386-6606405 | None:intergenic | 35.0% | |
| AAGCGTCAAATCATTAACTC+AGG | - | chr7_3:6606419-6606438 | Msa1091290:intron | 35.0% | |
| AGCGTCAAATCATTAACTCA+GGG | - | chr7_3:6606420-6606439 | Msa1091290:intron | 35.0% | |
| CAAATCATTAACTCAGGGTA+TGG | - | chr7_3:6606425-6606444 | Msa1091290:intron | 35.0% | |
| !!! | GACTATTTTTTGCTGGGTTA+TGG | - | chr7_3:6606459-6606478 | Msa1091290:intron | 35.0% |
| TACAATTTCATTACCAAGGG+TGG | - | chr7_3:6606505-6606524 | Msa1091290:intron | 35.0% | |
| ACAATTTCATTACCAAGGGT+GGG | - | chr7_3:6606506-6606525 | Msa1091290:intron | 35.0% | |
| ! | TTTTCAGCCAACTAACATGA+TGG | - | chr7_3:6606559-6606578 | Msa1091290:intron | 35.0% |
| AATTCATCATGTTAGTTGGC+TGG | + | chr7_3:6606760-6606779 | None:intergenic | 35.0% | |
| AGCCAACTAACATGATGAAT+TGG | - | chr7_3:6606759-6606778 | Msa1091290:intron | 35.0% | |
| !! | TCTTTTTAAAAGGGGAGAGA+GGG | + | chr7_3:6606934-6606953 | None:intergenic | 35.0% |
| !! | TTCTTTTTAAAAGGGGAGAG+AGG | + | chr7_3:6606935-6606954 | None:intergenic | 35.0% |
| TTTCACTGTGAATGCTATAC+AGG | - | chr7_3:6607018-6607037 | Msa1091290:intron | 35.0% | |
| AGCAATTGAGATGCTATAAC+TGG | + | chr7_3:6607044-6607063 | None:intergenic | 35.0% | |
| GTAAGAAAGAACGTCTAAGT+TGG | + | chr7_3:6607110-6607129 | None:intergenic | 35.0% | |
| CAATTCAAAAGAGAAGCTTC+AGG | + | chr7_3:6607132-6607151 | None:intergenic | 35.0% | |
| ! | CTGAAGCTTCTCTTTTGAAT+TGG | - | chr7_3:6607130-6607149 | Msa1091290:intron | 35.0% |
| ! | ATTTCTTTTGACGCGTCTAT+TGG | - | chr7_3:6607169-6607188 | Msa1091290:intron | 35.0% |
| ! | TTTCTTTTGACGCGTCTATT+GGG | - | chr7_3:6607170-6607189 | Msa1091290:intron | 35.0% |
| AGTAGATCTAGTTGGAAATG+TGG | - | chr7_3:6607334-6607353 | Msa1091290:CDS | 35.0% | |
| TATGAATAGTCTGCACTGAA+TGG | - | chr7_3:6607390-6607409 | Msa1091290:five_prime_UTR | 35.0% | |
| AACAACATGCTTAGATGCTT+AGG | + | chr7_3:6607466-6607485 | None:intergenic | 35.0% | |
| !!! | TTGTGGTTTTGTGAAACGAC+GGG | + | chr7_3:6599767-6599786 | None:intergenic | 40.0% |
| !! | AGAGAAAGCGGGTTTTCTAA+GGG | + | chr7_3:6599797-6599816 | None:intergenic | 40.0% |
| !! | AAGAGAAAGCGGGTTTTCTA+AGG | + | chr7_3:6599798-6599817 | None:intergenic | 40.0% |
| GGAAATGAAGAAGAGAAAGC+GGG | + | chr7_3:6599808-6599827 | None:intergenic | 40.0% | |
| GAGAAGAGTGAAGAATGAAG+TGG | + | chr7_3:6599829-6599848 | None:intergenic | 40.0% | |
| AATTATTAGCTAGCCCTGTC+AGG | - | chr7_3:6600329-6600348 | Msa1091290:intron | 40.0% | |
| ATTATTAGCTAGCCCTGTCA+GGG | - | chr7_3:6600330-6600349 | Msa1091290:intron | 40.0% | |
| ACTGTGTCAGTGTTTGTGTT+CGG | - | chr7_3:6600442-6600461 | Msa1091290:intron | 40.0% | |
| TACTAGACACCACTTGAGAA+TGG | + | chr7_3:6600750-6600769 | None:intergenic | 40.0% | |
| CCACACTAATAGATTGACAC+CGG | + | chr7_3:6600886-6600905 | None:intergenic | 40.0% | |
| GTGGTCTCATGTATATGTGT+CGG | - | chr7_3:6600902-6600921 | Msa1091290:CDS | 40.0% | |
| TGGTCTCATGTATATGTGTC+GGG | - | chr7_3:6600903-6600922 | Msa1091290:CDS | 40.0% | |
| AGATGTATCAGTGTCATGTC+TGG | - | chr7_3:6601108-6601127 | Msa1091290:CDS | 40.0% | |
| GCTGTGTTAGGTATATGTGT+CGG | - | chr7_3:6601513-6601532 | Msa1091290:intron | 40.0% | |
| ! | AATTTTGTGGAATGCTGAGC+TGG | - | chr7_3:6601836-6601855 | Msa1091290:intron | 40.0% |
| TCAGCAAATCCAGAATCCAA+CGG | - | chr7_3:6601876-6601895 | Msa1091290:intron | 40.0% | |
| TCATAATAGCCGTTGGATTC+TGG | + | chr7_3:6601888-6601907 | None:intergenic | 40.0% | |
| CTAGCAATCATAATAGCCGT+TGG | + | chr7_3:6601895-6601914 | None:intergenic | 40.0% | |
| CAACGGCTATTATGATTGCT+AGG | - | chr7_3:6601893-6601912 | Msa1091290:intron | 40.0% | |
| ACTTCTACTGTCCTCTTCAT+TGG | - | chr7_3:6601955-6601974 | Msa1091290:intron | 40.0% | |
| CTTCTACTGTCCTCTTCATT+GGG | - | chr7_3:6601956-6601975 | Msa1091290:intron | 40.0% | |
| TTCTACTGTCCTCTTCATTG+GGG | - | chr7_3:6601957-6601976 | Msa1091290:intron | 40.0% | |
| TCATAAGTTCCCCAATGAAG+AGG | + | chr7_3:6601969-6601988 | None:intergenic | 40.0% | |
| TTCAACTGGTGCAAATTGCT+TGG | + | chr7_3:6602055-6602074 | None:intergenic | 40.0% | |
| ! | AAAATTTTTATGGGTGCCCG+TGG | + | chr7_3:6602280-6602299 | None:intergenic | 40.0% |
| CTATTCACTCGCAGTTAAAG+AGG | + | chr7_3:6602530-6602549 | None:intergenic | 40.0% | |
| AATCCATCAACCAATACACG+TGG | + | chr7_3:6602642-6602661 | None:intergenic | 40.0% | |
| GTTCAAGACTCCTGTTGTAA+TGG | - | chr7_3:6602701-6602720 | Msa1091290:intron | 40.0% | |
| AAAATCCACCTTTGTCCTCA+CGG | + | chr7_3:6602772-6602791 | None:intergenic | 40.0% | |
| CTGCAACAGAGTTATTCACT+TGG | - | chr7_3:6602835-6602854 | Msa1091290:intron | 40.0% | |
| ATTTGATGTTGACACACGCT+TGG | - | chr7_3:6603160-6603179 | Msa1091290:CDS | 40.0% | |
| !! | ATGCAATGTTTGCTGTCACA+CGG | - | chr7_3:6603500-6603519 | Msa1091290:intron | 40.0% |
| GATATGCCGTCCATATATGT+TGG | - | chr7_3:6603528-6603547 | Msa1091290:intron | 40.0% | |
| ACTGCACCAACATATATGGA+CGG | + | chr7_3:6603537-6603556 | None:intergenic | 40.0% | |
| CGATACTGCACCAACATATA+TGG | + | chr7_3:6603541-6603560 | None:intergenic | 40.0% | |
| ! | TTTTATGAGCTGACATGACG+AGG | + | chr7_3:6603621-6603640 | None:intergenic | 40.0% |
| GGGATGAAGGAATGAAGTAA+TGG | - | chr7_3:6603733-6603752 | Msa1091290:intron | 40.0% | |
| ! | AGTATTCTTTTCTCCGCGTT+TGG | - | chr7_3:6603758-6603777 | Msa1091290:intron | 40.0% |
| ! | GTATTCTTTTCTCCGCGTTT+GGG | - | chr7_3:6603759-6603778 | Msa1091290:intron | 40.0% |
| ! | CAACTCTATCCAAGTTGAGT+TGG | + | chr7_3:6603800-6603819 | None:intergenic | 40.0% |
| ! | ATGGGGGATCAATTCCTTTT+TGG | + | chr7_3:6604343-6604362 | None:intergenic | 40.0% |
| AGATGAAATAGGACATGGCA+AGG | + | chr7_3:6604591-6604610 | None:intergenic | 40.0% | |
| !!! | AAACATGGAGCGATTGGTTT+TGG | - | chr7_3:6604666-6604685 | Msa1091290:intron | 40.0% |
| !! | GCCGAAACTTTTGTTGATTG+AGG | + | chr7_3:6605204-6605223 | None:intergenic | 40.0% |
| TCAGTCGTTAAAATGCAGAC+AGG | - | chr7_3:6605330-6605349 | Msa1091290:CDS | 40.0% | |
| TCCGGACATAAGAGTCAAAT+AGG | - | chr7_3:6605421-6605440 | Msa1091290:intron | 40.0% | |
| AAGCGAGCAACAAAACTATG+AGG | - | chr7_3:6605776-6605795 | Msa1091290:intron | 40.0% | |
| GAATTTCCTCGCCAATGTTT+AGG | - | chr7_3:6605919-6605938 | Msa1091290:intron | 40.0% | |
| ATTTCCTCGCCAATGTTTAG+GGG | - | chr7_3:6605921-6605940 | Msa1091290:intron | 40.0% | |
| ! | TTTTGCTGATGCACTTCTTG+TGG | - | chr7_3:6606122-6606141 | Msa1091290:intron | 40.0% |
| ! | GAGTTTTCAGCAAGTGTCTT+TGG | + | chr7_3:6606150-6606169 | None:intergenic | 40.0% |
| ! | AAGACACTTGCTGAAAACTC+TGG | - | chr7_3:6606150-6606169 | Msa1091290:intron | 40.0% |
| CATGACAGAGGGAATATTGT+TGG | - | chr7_3:6606329-6606348 | Msa1091290:intron | 40.0% | |
| ! | TTTTTGCTGGGTTATGGAAC+TGG | - | chr7_3:6606465-6606484 | Msa1091290:intron | 40.0% |
| ! | TTTTGCTGGGTTATGGAACT+GGG | - | chr7_3:6606466-6606485 | Msa1091290:intron | 40.0% |
| CGTCAATCCATCATGTTAGT+TGG | + | chr7_3:6606569-6606588 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTCATTAGCGACA+TGG | + | chr7_3:6606659-6606678 | None:intergenic | 40.0% |
| TACAATTTCATTGCCAAGGG+TGG | - | chr7_3:6606700-6606719 | Msa1091290:intron | 40.0% | |
| ACAATTTCATTGCCAAGGGT+GGG | - | chr7_3:6606701-6606720 | Msa1091290:intron | 40.0% | |
| CGCCAATTCATCATGTTAGT+TGG | + | chr7_3:6606764-6606783 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTCATTTGCGACA+TGG | + | chr7_3:6606854-6606873 | None:intergenic | 40.0% |
| ! | AGCATCTCAATTGCTATTGG+TGG | - | chr7_3:6607049-6607068 | Msa1091290:intron | 40.0% |
| TGGATGAAGTAATTCGTGCT+GGG | - | chr7_3:6607069-6607088 | Msa1091290:intron | 40.0% | |
| !!! | TGTGGTTTTGTGAAACGACG+GGG | + | chr7_3:6599766-6599785 | None:intergenic | 45.0% |
| !! | AAGCGGGTTTTCTAAGGGTT+TGG | + | chr7_3:6599792-6599811 | None:intergenic | 45.0% |
| TGTTCAGAACTTCGGCGTTA+GGG | + | chr7_3:6599916-6599935 | None:intergenic | 45.0% | |
| TTGTTCAGAACTTCGGCGTT+AGG | + | chr7_3:6599917-6599936 | None:intergenic | 45.0% | |
| !! | CGCCGAAGTTCTGAACAAAT+CGG | - | chr7_3:6599919-6599938 | Msa1091290:three_prime_UTR | 45.0% |
| !! | CGCCGATTTGTTCAGAACTT+CGG | + | chr7_3:6599924-6599943 | None:intergenic | 45.0% |
| !! | CGAAGTTCTGAACAAATCGG+CGG | - | chr7_3:6599922-6599941 | Msa1091290:three_prime_UTR | 45.0% |
| !! | GAATGAATCAGGCTTGTTGG+TGG | - | chr7_3:6600105-6600124 | Msa1091290:three_prime_UTR | 45.0% |
| CTGATTGAAGACGTCGTATC+TGG | - | chr7_3:6600251-6600270 | Msa1091290:intron | 45.0% | |
| AGACGTCGTATCTGGTTATG+AGG | - | chr7_3:6600259-6600278 | Msa1091290:intron | 45.0% | |
| ! | CCGGTGTCAATCTATTAGTG+TGG | - | chr7_3:6600883-6600902 | Msa1091290:CDS | 45.0% |
| !! | ACTATCAGTGTTGATGCGTG+TGG | - | chr7_3:6601036-6601055 | Msa1091290:intron | 45.0% |
| TCGGCTACAAAGAACTGACA+TGG | + | chr7_3:6601143-6601162 | None:intergenic | 45.0% | |
| CGATGTGTCAGTGTTGTGTT+TGG | - | chr7_3:6601309-6601328 | Msa1091290:intron | 45.0% | |
| ATCAACATAACTGCCAGTGC+AGG | - | chr7_3:6601610-6601629 | Msa1091290:intron | 45.0% | |
| AGCATCAACTTAACCTGCAC+TGG | + | chr7_3:6601626-6601645 | None:intergenic | 45.0% | |
| !! | GTGCAGGTTAAGTTGATGCT+AGG | - | chr7_3:6601626-6601645 | Msa1091290:intron | 45.0% |
| !! | GTTAAGTTGATGCTAGGTGC+AGG | - | chr7_3:6601632-6601651 | Msa1091290:intron | 45.0% |
| GTTGCACAGGATGACATTAG+TGG | - | chr7_3:6601922-6601941 | Msa1091290:intron | 45.0% | |
| CAGGATGACATTAGTGGTGA+TGG | - | chr7_3:6601928-6601947 | Msa1091290:intron | 45.0% | |
| TCTGAGCGTTACATCGATGA+AGG | - | chr7_3:6601994-6602013 | Msa1091290:intron | 45.0% | |
| AGGTATGCATCCACGTGTAT+TGG | - | chr7_3:6602629-6602648 | Msa1091290:intron | 45.0% | |
| !! | CATCCACGTGTATTGGTTGA+TGG | - | chr7_3:6602636-6602655 | Msa1091290:intron | 45.0% |
| AAGAACAACCGTGAGGACAA+AGG | - | chr7_3:6602761-6602780 | Msa1091290:intron | 45.0% | |
| CAATTGCTTCTTCGGGCTTT+CGG | + | chr7_3:6603103-6603122 | None:intergenic | 45.0% | |
| TGGTCGAGATTATGCACATG+CGG | - | chr7_3:6603132-6603151 | Msa1091290:CDS | 45.0% | |
| GAACATGTTCAGCAGAAGAG+TGG | + | chr7_3:6603197-6603216 | None:intergenic | 45.0% | |
| TAAAACTGAGAGACCGTTGC+CGG | - | chr7_3:6603636-6603655 | Msa1091290:intron | 45.0% | |
| ATATCTGGGTCTGTAGGACT+AGG | - | chr7_3:6603685-6603704 | Msa1091290:intron | 45.0% | |
| TATCTGGGTCTGTAGGACTA+GGG | - | chr7_3:6603686-6603705 | Msa1091290:intron | 45.0% | |
| CTCAAATGCTGAACAGAGAG+AGG | - | chr7_3:6604069-6604088 | Msa1091290:intron | 45.0% | |
| AGGCTATGGTTGTAGCTGAA+AGG | - | chr7_3:6604089-6604108 | Msa1091290:CDS | 45.0% | |
| TTGCAAGCATGTCCAACGAT+GGG | + | chr7_3:6604361-6604380 | None:intergenic | 45.0% | |
| ATCGTTGGACATGCTTGCAA+GGG | - | chr7_3:6604361-6604380 | Msa1091290:intron | 45.0% | |
| CAGAGCAAAGAGGAGAAACA+TGG | - | chr7_3:6604651-6604670 | Msa1091290:intron | 45.0% | |
| TGAGCTATCGTGTGGTCATT+GGG | + | chr7_3:6605006-6605025 | None:intergenic | 45.0% | |
| TTGAGCTATCGTGTGGTCAT+TGG | + | chr7_3:6605007-6605026 | None:intergenic | 45.0% | |
| ATTAAAGATGCCGTCCGTGA+TGG | - | chr7_3:6605027-6605046 | Msa1091290:intron | 45.0% | |
| TTTCCTCGCCAATGTTTAGG+GGG | - | chr7_3:6605922-6605941 | Msa1091290:intron | 45.0% | |
| TTGAAACAGCGTGCACAACT+TGG | - | chr7_3:6606090-6606109 | Msa1091290:intron | 45.0% | |
| !! | GTTGGTTTGAGCCAAAACAG+TGG | - | chr7_3:6606347-6606366 | Msa1091290:intron | 45.0% |
| GTGGATGAAGTAATTCGTGC+TGG | - | chr7_3:6607068-6607087 | Msa1091290:intron | 45.0% | |
| !!! | AAAAAAAAAAAAAGAATTTT+TGG | - | chr7_3:6605500-6605519 | Msa1091290:intron | 5.0% |
| !! | ATCAGGCTTGTTGGTGGTTC+TGG | - | chr7_3:6600111-6600130 | Msa1091290:three_prime_UTR | 50.0% |
| ! | CAACGTGTCACTGCTGTGTT+AGG | - | chr7_3:6601501-6601520 | Msa1091290:intron | 50.0% |
| ! | TTTTATGGGTGCCCGTGGAA+AGG | + | chr7_3:6602275-6602294 | None:intergenic | 50.0% |
| TGGTAGCAAGAACAACCGTG+AGG | - | chr7_3:6602754-6602773 | Msa1091290:intron | 50.0% | |
| AACAACCGTGAGGACAAAGG+TGG | - | chr7_3:6602764-6602783 | Msa1091290:intron | 50.0% | |
| CAAAACAGAGGAACCGGCAA+CGG | + | chr7_3:6603652-6603671 | None:intergenic | 50.0% | |
| GTAGGCATATCTGGGTCTGT+AGG | - | chr7_3:6603679-6603698 | Msa1091290:intron | 50.0% | |
| TGTAGGACTAGGGTGCAAGT+TGG | - | chr7_3:6603696-6603715 | Msa1091290:intron | 50.0% | |
| ! | ACTAGGGTGCAAGTTGGAGA+GGG | - | chr7_3:6603702-6603721 | Msa1091290:intron | 50.0% |
| TGCTGAACAGAGAGAGGCTA+TGG | - | chr7_3:6604075-6604094 | Msa1091290:intron | 50.0% | |
| GGTTCTCACATGTTCCTCAG+TGG | - | chr7_3:6604190-6604209 | Msa1091290:intron | 50.0% | |
| AGGAATTGATCCCCCATCGT+TGG | - | chr7_3:6604346-6604365 | Msa1091290:intron | 50.0% | |
| TGCAAGCATGTCCAACGATG+GGG | + | chr7_3:6604360-6604379 | None:intergenic | 50.0% | |
| CTTGCAAGCATGTCCAACGA+TGG | + | chr7_3:6604362-6604381 | None:intergenic | 50.0% | |
| CATCGTTGGACATGCTTGCA+AGG | - | chr7_3:6604360-6604379 | Msa1091290:intron | 50.0% | |
| TTGGACATGCTTGCAAGGGA+AGG | - | chr7_3:6604365-6604384 | Msa1091290:intron | 50.0% | |
| TCTCCTCTTTGCTCTGCGAA+GGG | + | chr7_3:6604647-6604666 | None:intergenic | 50.0% | |
| TTCTCCTCTTTGCTCTGCGA+AGG | + | chr7_3:6604648-6604667 | None:intergenic | 50.0% | |
| GAGGAGAAACATGGAGCGAT+TGG | - | chr7_3:6604660-6604679 | Msa1091290:intron | 50.0% | |
| TCACTGCCCTCAAACCATCA+CGG | + | chr7_3:6605044-6605063 | None:intergenic | 50.0% | |
| ! | GCTTAATCTGGTTTCTGGGC+AGG | - | chr7_3:6605372-6605391 | Msa1091290:intron | 50.0% |
| ! | AATCTGGTTTCTGGGCAGGA+TGG | - | chr7_3:6605376-6605395 | Msa1091290:intron | 50.0% |
| AATCAACTCGAGCATGAGGG+AGG | + | chr7_3:6605666-6605685 | None:intergenic | 50.0% | |
| ! | TTTCAGGGAGAGCATGACAG+AGG | - | chr7_3:6606317-6606336 | Msa1091290:intron | 50.0% |
| ! | TTCAGGGAGAGCATGACAGA+GGG | - | chr7_3:6606318-6606337 | Msa1091290:intron | 50.0% |
| ! | CTATGGGCTCTCCACTGTTT+TGG | + | chr7_3:6606361-6606380 | None:intergenic | 50.0% |
| AGAGCCCATAGACCCTCAAA+TGG | - | chr7_3:6606370-6606389 | Msa1091290:intron | 50.0% | |
| CCCTCCATTTGAGGGTCTAT+GGG | + | chr7_3:6606377-6606396 | None:intergenic | 50.0% | |
| CCCATAGACCCTCAAATGGA+GGG | - | chr7_3:6606374-6606393 | Msa1091290:intron | 50.0% | |
| ACCCTCCATTTGAGGGTCTA+TGG | + | chr7_3:6606378-6606397 | None:intergenic | 50.0% | |
| ATTTCATTGCCAAGGGTGGG+TGG | - | chr7_3:6606704-6606723 | Msa1091290:intron | 50.0% | |
| TTTCATTGCCAAGGGTGGGT+GGG | - | chr7_3:6606705-6606724 | Msa1091290:intron | 50.0% | |
| GAGGGATCATCACTCAAGCA+AGG | + | chr7_3:6606916-6606935 | None:intergenic | 50.0% | |
| CATCGAACACGACCCTGACA+GGG | + | chr7_3:6600345-6600364 | None:intergenic | 55.0% | |
| ACATCGAACACGACCCTGAC+AGG | + | chr7_3:6600346-6600365 | None:intergenic | 55.0% | |
| GCAGCTCCCTAACCTTTCCA+CGG | - | chr7_3:6602260-6602279 | Msa1091290:CDS | 55.0% | |
| CAGCTCCCTAACCTTTCCAC+GGG | - | chr7_3:6602261-6602280 | Msa1091290:CDS | 55.0% | |
| GGCTCAGCACCCATTACAAC+AGG | + | chr7_3:6602714-6602733 | None:intergenic | 55.0% | |
| CACTATGTGCTGGGTTGCCT+AGG | - | chr7_3:6603250-6603269 | Msa1091290:intron | 55.0% | |
| ! | TGCTGGGTTGCCTAGGTTGA+GGG | - | chr7_3:6603257-6603276 | Msa1091290:intron | 55.0% |
| AAGGACGAGACCCTCAACCT+AGG | + | chr7_3:6603270-6603289 | None:intergenic | 55.0% | |
| GAGGGTCTCGTCCTTGATCA+TGG | - | chr7_3:6603275-6603294 | Msa1091290:intron | 55.0% | |
| ! | GGTGTCGGGAACCATGATCA+AGG | + | chr7_3:6603289-6603308 | None:intergenic | 55.0% |
| ! | TCGCTTCATGTCAGGGTGTC+GGG | + | chr7_3:6603303-6603322 | None:intergenic | 55.0% |
| GTCGCTTCATGTCAGGGTGT+CGG | + | chr7_3:6603304-6603323 | None:intergenic | 55.0% | |
| CTGCACGTCGCTTCATGTCA+GGG | + | chr7_3:6603310-6603329 | None:intergenic | 55.0% | |
| TCTGCACGTCGCTTCATGTC+AGG | + | chr7_3:6603311-6603330 | None:intergenic | 55.0% | |
| ATGAGCTGACATGACGAGGC+AGG | + | chr7_3:6603617-6603636 | None:intergenic | 55.0% | |
| ! | GACTAGGGTGCAAGTTGGAG+AGG | - | chr7_3:6603701-6603720 | Msa1091290:intron | 55.0% |
| ! | CTAGGGTGCAAGTTGGAGAG+GGG | - | chr7_3:6603703-6603722 | Msa1091290:intron | 55.0% |
| ! | TAGGGTGCAAGTTGGAGAGG+GGG | - | chr7_3:6603704-6603723 | Msa1091290:intron | 55.0% |
| !! | GGTTGTAGCTGAAAGGCGTC+AGG | - | chr7_3:6604096-6604115 | Msa1091290:CDS | 55.0% |
| GTTCCTCAGTGGTCATGCTC+TGG | - | chr7_3:6604201-6604220 | Msa1091290:intron | 55.0% | |
| AGACCAGAGCATGACCACTG+AGG | + | chr7_3:6604207-6604226 | None:intergenic | 55.0% | |
| GCAAGCATGTCCAACGATGG+GGG | + | chr7_3:6604359-6604378 | None:intergenic | 55.0% | |
| TTGCCCTTCGCAGAGCAAAG+AGG | - | chr7_3:6604641-6604660 | Msa1091290:intron | 55.0% | |
| !!! | GAGCGATTGGTTTTGGCCTG+TGG | - | chr7_3:6604673-6604692 | Msa1091290:intron | 55.0% |
| !!! | CGATTGGTTTTGGCCTGTGG+AGG | - | chr7_3:6604676-6604695 | Msa1091290:intron | 55.0% |
| GTTTACAGCCTCACCTCCAC+AGG | + | chr7_3:6604692-6604711 | None:intergenic | 55.0% | |
| ATCGTGTGGTCATTGGGACC+TGG | + | chr7_3:6605000-6605019 | None:intergenic | 55.0% | |
| ATGCCGTCCGTGATGGTTTG+AGG | - | chr7_3:6605034-6605053 | Msa1091290:intron | 55.0% | |
| TGCCGTCCGTGATGGTTTGA+GGG | - | chr7_3:6605035-6605054 | Msa1091290:intron | 55.0% | |
| TGCCCTCAAACCATCACGGA+CGG | + | chr7_3:6605040-6605059 | None:intergenic | 55.0% | |
| AACTCGAGCATGAGGGAGGA+AGG | + | chr7_3:6605662-6605681 | None:intergenic | 55.0% | |
| TGCACCAGCCCCCTAAACAT+TGG | + | chr7_3:6605933-6605952 | None:intergenic | 55.0% | |
| !! | GCGTGCACAACTTGGTGTTG+AGG | - | chr7_3:6606098-6606117 | Msa1091290:intron | 55.0% |
| GCCCATAGACCCTCAAATGG+AGG | - | chr7_3:6606373-6606392 | Msa1091290:intron | 55.0% | |
| TTACCAAGGGTGGGTGTGCA+TGG | - | chr7_3:6606515-6606534 | Msa1091290:intron | 55.0% | |
| TACCAAGGGTGGGTGTGCAT+GGG | - | chr7_3:6606516-6606535 | Msa1091290:intron | 55.0% | |
| TTCGTGCTGGGCGTAACATG+CGG | - | chr7_3:6607081-6607100 | Msa1091290:CDS | 55.0% | |
| TGCTAGGACAGCGGTTGCAC+AGG | - | chr7_3:6601909-6601928 | Msa1091290:intron | 60.0% | |
| GGGTGCCCGTGGAAAGGTTA+GGG | + | chr7_3:6602269-6602288 | None:intergenic | 60.0% | |
| TGGGTGCCCGTGGAAAGGTT+AGG | + | chr7_3:6602270-6602289 | None:intergenic | 60.0% | |
| GTGCTGGGTTGCCTAGGTTG+AGG | - | chr7_3:6603256-6603275 | Msa1091290:intron | 60.0% | |
| ! | AGGGTGCAAGTTGGAGAGGG+GGG | - | chr7_3:6603705-6603724 | Msa1091290:intron | 60.0% |
| !! | GGTTTTGGCCTGTGGAGGTG+AGG | - | chr7_3:6604681-6604700 | Msa1091290:intron | 60.0% |
| CAGCCCCCTAAACATTGGCG+AGG | + | chr7_3:6605928-6605947 | None:intergenic | 60.0% | |
| CTCGCCAATGTTTAGGGGGC+TGG | - | chr7_3:6605926-6605945 | Msa1091290:intron | 60.0% | |
| AACCCATGCACACCCACCCT+TGG | + | chr7_3:6606521-6606540 | None:intergenic | 60.0% | |
| AAGGGTGGGTGTGCATGGGT+TGG | - | chr7_3:6606520-6606539 | Msa1091290:intron | 60.0% | |
| ! | GGGTGCAAGTTGGAGAGGGG+GGG | - | chr7_3:6603706-6603725 | Msa1091290:intron | 65.0% |
| ! | TGCAAGTTGGAGAGGGGGGG+AGG | - | chr7_3:6603709-6603728 | Msa1091290:intron | 65.0% |
| ! | GCAAGTTGGAGAGGGGGGGA+GGG | - | chr7_3:6603710-6603729 | Msa1091290:intron | 65.0% |
| ! | CAAGTTGGAGAGGGGGGGAG+GGG | - | chr7_3:6603711-6603730 | Msa1091290:intron | 65.0% |
| AAGTTGGAGAGGGGGGGAGG+GGG | - | chr7_3:6603712-6603731 | Msa1091290:intron | 65.0% | |
| TTGCCAAGGGTGGGTGGGCA+TGG | - | chr7_3:6606710-6606729 | Msa1091290:intron | 65.0% | |
| TGCCAAGGGTGGGTGGGCAT+GGG | - | chr7_3:6606711-6606730 | Msa1091290:intron | 65.0% | |
| AACCCATGCCCACCCACCCT+TGG | + | chr7_3:6606716-6606735 | None:intergenic | 65.0% | |
| AAGGGTGGGTGGGCATGGGT+TGG | - | chr7_3:6606715-6606734 | Msa1091290:intron | 65.0% | |
| AGTTGGAGAGGGGGGGAGGG+GGG | - | chr7_3:6603713-6603732 | Msa1091290:intron | 70.0% | |
| GAGGGGGGGAGGGGGGATGA+AGG | - | chr7_3:6603720-6603739 | Msa1091290:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 6599743 | 6607514 | 6599743 | ID=Msa1091290;Name=Msa1091290 |
| chr7_3 | mRNA | 6599743 | 6607514 | 6599743 | ID=Msa1091290-mRNA-1;Parent=Msa1091290;Name=Msa1091290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=150|0.92|0.93|1|1|1|15|399|547 |
| chr7_3 | exon | 6599743 | 6600217 | 6599743 | ID=Msa1091290-mRNA-1:exon:2051;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6600816 | 6600934 | 6600816 | ID=Msa1091290-mRNA-1:exon:2050;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6601051 | 6601158 | 6601051 | ID=Msa1091290-mRNA-1:exon:2049;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6601248 | 6601316 | 6601248 | ID=Msa1091290-mRNA-1:exon:2048;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6602162 | 6602292 | 6602162 | ID=Msa1091290-mRNA-1:exon:2047;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6602416 | 6602620 | 6602416 | ID=Msa1091290-mRNA-1:exon:2046;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6602869 | 6602955 | 6602869 | ID=Msa1091290-mRNA-1:exon:2045;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6603098 | 6603212 | 6603098 | ID=Msa1091290-mRNA-1:exon:2044;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6603879 | 6603985 | 6603879 | ID=Msa1091290-mRNA-1:exon:2043;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6604076 | 6604168 | 6604076 | ID=Msa1091290-mRNA-1:exon:2042;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6604305 | 6604352 | 6604305 | ID=Msa1091290-mRNA-1:exon:2041;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6604475 | 6604626 | 6604475 | ID=Msa1091290-mRNA-1:exon:2040;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6605242 | 6605377 | 6605242 | ID=Msa1091290-mRNA-1:exon:2039;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6607078 | 6607141 | 6607078 | ID=Msa1091290-mRNA-1:exon:2038;Parent=Msa1091290-mRNA-1 |
| chr7_3 | exon | 6607231 | 6607514 | 6607231 | ID=Msa1091290-mRNA-1:exon:2037;Parent=Msa1091290-mRNA-1 |
| chr7_3 | five_prime_UTR | 6607365 | 6607514 | 6607365 | ID=Msa1091290-mRNA-1:five_prime_utr;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6607231 | 6607364 | 6607231 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6607078 | 6607141 | 6607078 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6605242 | 6605377 | 6605242 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6604475 | 6604626 | 6604475 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6604305 | 6604352 | 6604305 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6604076 | 6604168 | 6604076 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6603879 | 6603985 | 6603879 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6603098 | 6603212 | 6603098 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6602869 | 6602955 | 6602869 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6602416 | 6602620 | 6602416 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6602162 | 6602292 | 6602162 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6601248 | 6601316 | 6601248 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6601051 | 6601158 | 6601051 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6600816 | 6600934 | 6600816 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | CDS | 6600142 | 6600217 | 6600142 | ID=Msa1091290-mRNA-1:cds;Parent=Msa1091290-mRNA-1 |
| chr7_3 | three_prime_UTR | 6599743 | 6600141 | 6599743 | ID=Msa1091290-mRNA-1:three_prime_utr;Parent=Msa1091290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
