Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052080 | XP_024631107.1 | 96.122 | 722 | 10 | 1 | 17 | 738 | 326 | 1029 | 0.0 | 1418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052080 | sp|Q8GS71|KN4A_ARATH | 73.103 | 725 | 163 | 7 | 17 | 735 | 333 | 1031 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052080 | G7I2C6 | 95.983 | 722 | 10 | 1 | 17 | 738 | 326 | 1028 | 0.0 | 1416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0052080 | 0.831854 | 1.318270e-55 | -8.615850e-47 |
| Msa0017510 | Msa0052080 | 0.809003 | 2.345417e-50 | -8.615850e-47 |
| Msa0018250 | Msa0052080 | 0.944692 | 1.220906e-103 | -8.615850e-47 |
| Msa0050940 | Msa0052080 | 0.804821 | 1.796743e-49 | -8.615850e-47 |
| Msa0052080 | Msa0054640 | 0.800447 | 1.434975e-48 | -8.615850e-47 |
| Msa0052080 | Msa0076310 | 0.804270 | 2.341301e-49 | -8.615850e-47 |
| Msa0052080 | Msa0090590 | 0.809698 | 1.664204e-50 | -8.615850e-47 |
| Msa0052080 | Msa0110970 | 0.804585 | 2.013313e-49 | -8.615850e-47 |
| Msa0052080 | Msa0140570 | 0.805105 | 1.567140e-49 | -8.615850e-47 |
| Msa0052080 | Msa0145670 | 0.809670 | 1.686866e-50 | -8.615850e-47 |
| Msa0052080 | Msa0157290 | 0.808748 | 2.659580e-50 | -8.615850e-47 |
| Msa0052080 | Msa0436050 | 0.802862 | 4.586142e-49 | -8.615850e-47 |
| Msa0052080 | Msa0467300 | 0.803465 | 3.441862e-49 | -8.615850e-47 |
| Msa0052080 | Msa0521880 | 0.800056 | 1.723748e-48 | -8.615850e-47 |
| Msa0052080 | Msa0710070 | 0.804112 | 2.526109e-49 | -8.615850e-47 |
| Msa0052080 | Msa0880140 | 0.809547 | 1.793089e-50 | -8.615850e-47 |
| Msa0052080 | Msa0936270 | 0.825684 | 4.098564e-54 | -8.615850e-47 |
| Msa0052080 | Msa0969400 | 0.817224 | 3.684674e-52 | -8.615850e-47 |
| Msa0052080 | Msa0969700 | 0.847746 | 9.517823e-60 | -8.615850e-47 |
| Msa0052080 | Msa1038050 | 0.806400 | 8.378688e-50 | -8.615850e-47 |
| Msa0052080 | Msa1040120 | 0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa0052080 | Msa1128160 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0052080 | Msa1193340 | 0.800321 | 1.522728e-48 | -8.615850e-47 |
| Msa0052080 | Msa1264020 | 0.806837 | 6.774431e-50 | -8.615850e-47 |
| Msa0052080 | Msa1329920 | 0.802508 | 5.426079e-49 | -8.615850e-47 |
| Msa0052080 | Msa1364470 | -0.801530 | 8.622506e-49 | -8.615850e-47 |
| Msa0052080 | Msa1427760 | 0.804263 | 2.349607e-49 | -8.615850e-47 |
| Msa0052080 | Msa1429250 | 0.808548 | 2.934778e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052080 | MtrunA17_Chr1g0153061 | 95.983 | 722 | 10 | 1 | 17 | 738 | 326 | 1028 | 0.0 | 1416 |
| Msa0052080 | MtrunA17_Chr3g0134191 | 81.025 | 722 | 114 | 3 | 17 | 737 | 326 | 1025 | 0.0 | 1174 |
| Msa0052080 | MtrunA17_Chr4g0053211 | 66.158 | 721 | 224 | 5 | 17 | 737 | 334 | 1034 | 0.0 | 936 |
| Msa0052080 | MtrunA17_Chr5g0427481 | 47.196 | 642 | 258 | 12 | 17 | 601 | 320 | 937 | 6.40e-162 | 501 |
| Msa0052080 | MtrunA17_Chr3g0132911 | 45.833 | 480 | 202 | 6 | 166 | 602 | 14 | 478 | 4.63e-117 | 367 |
| Msa0052080 | MtrunA17_Chr3g0132901 | 43.830 | 235 | 121 | 4 | 233 | 467 | 24 | 247 | 3.88e-36 | 142 |
| Msa0052080 | MtrunA17_Chr3g0132921 | 57.983 | 119 | 47 | 1 | 17 | 132 | 311 | 429 | 4.92e-32 | 131 |
| Msa0052080 | MtrunA17_Chr1g0178411 | 33.540 | 161 | 88 | 3 | 17 | 164 | 323 | 477 | 1.35e-12 | 71.6 |
| Msa0052080 | MtrunA17_Chr7g0266631 | 51.429 | 70 | 33 | 1 | 17 | 85 | 319 | 388 | 4.06e-12 | 70.1 |
| Msa0052080 | MtrunA17_Chr2g0322291 | 46.250 | 80 | 41 | 2 | 17 | 95 | 388 | 466 | 6.28e-12 | 69.7 |
| Msa0052080 | MtrunA17_Chr2g0327581 | 50.000 | 70 | 34 | 1 | 17 | 85 | 354 | 423 | 1.90e-11 | 67.8 |
| Msa0052080 | MtrunA17_Chr4g0045381 | 50.746 | 67 | 32 | 1 | 17 | 83 | 493 | 558 | 3.79e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052080 | AT5G47820.2 | 73.103 | 725 | 163 | 7 | 17 | 735 | 333 | 1031 | 0.0 | 1059 |
| Msa0052080 | AT5G47820.1 | 73.103 | 725 | 163 | 7 | 17 | 735 | 333 | 1031 | 0.0 | 1059 |
| Msa0052080 | AT3G50240.3 | 58.149 | 724 | 262 | 10 | 17 | 732 | 241 | 931 | 0.0 | 737 |
| Msa0052080 | AT3G50240.1 | 58.564 | 724 | 259 | 11 | 17 | 732 | 343 | 1033 | 0.0 | 736 |
| Msa0052080 | AT3G50240.4 | 58.149 | 724 | 257 | 10 | 17 | 732 | 343 | 1028 | 0.0 | 734 |
| Msa0052080 | AT3G50240.2 | 59.967 | 602 | 217 | 5 | 17 | 618 | 343 | 920 | 0.0 | 646 |
| Msa0052080 | AT5G60930.1 | 50.000 | 422 | 191 | 3 | 186 | 600 | 537 | 945 | 2.13e-118 | 386 |
| Msa0052080 | AT5G60930.3 | 49.764 | 424 | 193 | 3 | 186 | 602 | 537 | 947 | 2.30e-118 | 386 |
| Msa0052080 | AT5G60930.2 | 49.764 | 424 | 193 | 3 | 186 | 602 | 537 | 947 | 5.73e-118 | 385 |
| Msa0052080 | AT5G33300.1 | 34.862 | 218 | 126 | 3 | 236 | 451 | 22 | 225 | 4.43e-21 | 97.4 |
| Msa0052080 | AT2G36200.1 | 36.000 | 150 | 77 | 3 | 17 | 153 | 322 | 465 | 1.46e-13 | 75.1 |
| Msa0052080 | AT2G36200.2 | 54.286 | 70 | 31 | 1 | 17 | 85 | 322 | 391 | 8.42e-13 | 72.8 |
| Msa0052080 | AT3G44050.1 | 48.052 | 77 | 38 | 2 | 17 | 92 | 393 | 468 | 1.02e-11 | 69.3 |
| Msa0052080 | AT3G17360.2 | 34.959 | 123 | 69 | 3 | 17 | 139 | 468 | 579 | 2.51e-11 | 68.2 |
| Msa0052080 | AT3G17360.3 | 34.677 | 124 | 70 | 3 | 17 | 140 | 468 | 580 | 7.03e-11 | 66.6 |
| Msa0052080 | AT3G17360.1 | 34.677 | 124 | 70 | 3 | 17 | 140 | 468 | 580 | 7.52e-11 | 66.6 |
Find 193 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGCTGCTTGAGTGTTTC+AGG | 0.179023 | 1_2:+6299556 | None:intergenic |
| CATATATTGAAGCAAAATTT+TGG | 0.181552 | 1_2:+6296936 | None:intergenic |
| ACAGAGTGTTTCAATGAATT+TGG | 0.185752 | 1_2:+6295720 | None:intergenic |
| TAACAATTCCTTTAACTTCT+TGG | 0.212874 | 1_2:+6297873 | None:intergenic |
| CTTGAATCCCCTGCTAAAAT+TGG | 0.213490 | 1_2:+6300012 | None:intergenic |
| TTTCTTACATCATTTGTAAA+AGG | 0.236610 | 1_2:-6294424 | Msa0052080:three_prime_UTR |
| GCAAATCCGTTCTTCCCTTT+TGG | 0.237050 | 1_2:+6297275 | None:intergenic |
| TAAAGACTGATGGACTTAAA+AGG | 0.241902 | 1_2:-6300217 | Msa0052080:CDS |
| GTTCTCCAGTGAAGCTATTC+TGG | 0.259060 | 1_2:+6297080 | None:intergenic |
| TCCTTAATGTTATGTTTCTA+TGG | 0.291702 | 1_2:-6294647 | Msa0052080:three_prime_UTR |
| TATTTCCAGACAAATTATAT+TGG | 0.298172 | 1_2:-6294759 | Msa0052080:three_prime_UTR |
| TCTAAATCAGCGTCAGAAAA+TGG | 0.306534 | 1_2:-6298538 | Msa0052080:intron |
| TACTTACGATAGGCTTATTT+CGG | 0.306949 | 1_2:+6301071 | None:intergenic |
| CCAACACTAGAAGGAGAAAA+AGG | 0.307171 | 1_2:-6294719 | Msa0052080:three_prime_UTR |
| ATGCTGTAACTAACTAACTA+TGG | 0.320902 | 1_2:+6294878 | None:intergenic |
| AGACAGGATCTTACCGAAAC+TGG | 0.325139 | 1_2:+6296419 | None:intergenic |
| CTTCTCCCATTGAGCGCAAC+TGG | 0.330511 | 1_2:+6296959 | None:intergenic |
| TCCTCAAGGAAAGAATTTCT+TGG | 0.334203 | 1_2:-6300559 | Msa0052080:CDS |
| GAGAAATGAAAGATCAAATC+AGG | 0.338207 | 1_2:-6296541 | Msa0052080:CDS |
| AACAAGAGGCAGAACAATTT+CGG | 0.340705 | 1_2:-6298947 | Msa0052080:CDS |
| AATTTCCAATATAATTTGTC+TGG | 0.343918 | 1_2:+6294754 | None:intergenic |
| GCAGAACTTTGTGCTCGTTC+TGG | 0.349147 | 1_2:-6300873 | Msa0052080:CDS |
| ACCATAGAAACATAACATTA+AGG | 0.349618 | 1_2:+6294646 | None:intergenic |
| AATGGCCACCAAGAAGTTAA+AGG | 0.350268 | 1_2:-6297881 | Msa0052080:CDS |
| TATGTTGTAGTTACAATGAA+TGG | 0.351362 | 1_2:-6297652 | Msa0052080:intron |
| TTGAAGAAGTAGCGAAAGAG+TGG | 0.366836 | 1_2:-6299984 | Msa0052080:CDS |
| TTACCCGTTGCTTCACTCAT+TGG | 0.373024 | 1_2:+6300167 | None:intergenic |
| TGCATACTTCAGAGTGTTAA+GGG | 0.380509 | 1_2:+6301111 | None:intergenic |
| CACATTGGCCAAGCCAGTTT+CGG | 0.381161 | 1_2:-6296432 | Msa0052080:intron |
| CCGTGATGAGCGACATGATT+AGG | 0.382052 | 1_2:-6302075 | None:intergenic |
| TAGATTGTATTTCATCTTGA+AGG | 0.385584 | 1_2:+6299082 | None:intergenic |
| GCAGTTGCAGGACAAGCTTC+TGG | 0.386327 | 1_2:-6295461 | Msa0052080:CDS |
| CGCTGTTTCGATGCTGGCAC+AGG | 0.388568 | 1_2:+6295666 | None:intergenic |
| AGTATATACCTCTATCAGTC+TGG | 0.389412 | 1_2:-6294931 | Msa0052080:three_prime_UTR |
| GCAAGATAGAGACCGTCTTT+TGG | 0.389757 | 1_2:-6299378 | Msa0052080:CDS |
| TTGCATACTTCAGAGTGTTA+AGG | 0.393243 | 1_2:+6301110 | None:intergenic |
| TTCTCCTTCTAGTGTTGGTA+TGG | 0.393322 | 1_2:+6294724 | None:intergenic |
| TTCATTGACAATTGCCCAAT+GGG | 0.393915 | 1_2:+6295491 | None:intergenic |
| GGCACAGGATCCGGAGATAA+AGG | 0.395926 | 1_2:+6295681 | None:intergenic |
| AGTTGCTTGCTTGGAGGCAT+TGG | 0.398435 | 1_2:-6294788 | Msa0052080:three_prime_UTR |
| TGGCTCTTCCGATGAAGTTC+AGG | 0.398959 | 1_2:-6300850 | Msa0052080:intron |
| TATCAAATTCACTTGATTTG+AGG | 0.400059 | 1_2:+6295296 | None:intergenic |
| TTCGATGCTGGCACAGGATC+CGG | 0.401136 | 1_2:+6295672 | None:intergenic |
| GCTTCACTCATTGGATAGTC+GGG | 0.401714 | 1_2:+6300176 | None:intergenic |
| TACACTTCTTCAAAACAGTA+TGG | 0.413521 | 1_2:-6299956 | Msa0052080:CDS |
| TGGCTGCAGGGTGATGTAAA+TGG | 0.423265 | 1_2:-6294962 | Msa0052080:intron |
| TCAATTATTTGATAACTGTC+AGG | 0.424363 | 1_2:+6294822 | None:intergenic |
| GAAATCTAAGCCACGACAAA+TGG | 0.425273 | 1_2:+6295259 | None:intergenic |
| ATCTAATTCACTTGTGGCAA+TGG | 0.425321 | 1_2:-6297043 | Msa0052080:CDS |
| ATCTTCAGGCGGGCTGCACT+TGG | 0.426046 | 1_2:-6297356 | Msa0052080:intron |
| AAAGACTGATGGACTTAAAA+GGG | 0.429784 | 1_2:-6300216 | Msa0052080:CDS |
| TGGAACCAGTTGCGCTCAAT+GGG | 0.432142 | 1_2:-6296964 | Msa0052080:CDS |
| TGCTTCACTCATTGGATAGT+CGG | 0.436997 | 1_2:+6300175 | None:intergenic |
| TCTTTCTATGTCTTGTGCCT+AGG | 0.437417 | 1_2:+6295213 | None:intergenic |
| CTGGAACCAGTTGCGCTCAA+TGG | 0.440080 | 1_2:-6296965 | Msa0052080:CDS |
| CTGTCCATACCAACACTAGA+AGG | 0.442261 | 1_2:-6294728 | Msa0052080:three_prime_UTR |
| GATCAAATCAGGGAACTTGT+AGG | 0.450119 | 1_2:-6296530 | Msa0052080:CDS |
| AGTGGCTAATACAATTCAAA+TGG | 0.451166 | 1_2:-6295406 | Msa0052080:CDS |
| TATACACCAGGCATTGCTAA+TGG | 0.452970 | 1_2:-6295639 | Msa0052080:CDS |
| GCAAGCTATGGAGGTGGAAA+AGG | 0.461364 | 1_2:-6295439 | Msa0052080:CDS |
| GCTAAACAGTTAAAGAAAGA+AGG | 0.462165 | 1_2:-6298597 | Msa0052080:intron |
| ATGGAAGATAGTTGCTTGCT+TGG | 0.463654 | 1_2:-6294797 | Msa0052080:three_prime_UTR |
| ATGTTGTAGTTACAATGAAT+GGG | 0.465944 | 1_2:-6297651 | Msa0052080:intron |
| TATTTGCGCTGTTTCGATGC+TGG | 0.466599 | 1_2:+6295660 | None:intergenic |
| TGGGAGTGGAACAACTAAAC+AGG | 0.467589 | 1_2:-6297632 | Msa0052080:intron |
| ACAATCTATAAAAGCCCAAA+AGG | 0.470007 | 1_2:-6299067 | Msa0052080:intron |
| CATGTCACTAAATGCAAGAA+TGG | 0.477519 | 1_2:-6297103 | Msa0052080:CDS |
| TCCTCGGCATTAATGTCAGC+AGG | 0.480865 | 1_2:+6301136 | None:intergenic |
| AATGGCCAGAATAGCTTCAC+TGG | 0.482049 | 1_2:-6297085 | Msa0052080:CDS |
| AATCTTGCTGCTGGTTCTGA+CGG | 0.489374 | 1_2:-6299344 | Msa0052080:CDS |
| GAAGATAGTTGCTTGCTTGG+AGG | 0.489492 | 1_2:-6294794 | Msa0052080:three_prime_UTR |
| GAAGTTGAAAATCTTGCTGC+TGG | 0.489563 | 1_2:-6299353 | Msa0052080:CDS |
| GAAACACTCAAGCAGCACTT+TGG | 0.490880 | 1_2:-6299553 | Msa0052080:CDS |
| TTGGCTTGAAGCAGCTAATG+AGG | 0.491992 | 1_2:-6300540 | Msa0052080:CDS |
| TGAGGCAGAAGAACGAGAAC+GGG | 0.495043 | 1_2:-6297007 | Msa0052080:CDS |
| TTTGCTTTAGAAGCTGAACC+TGG | 0.496058 | 1_2:+6299133 | None:intergenic |
| TGATGCAGATGGTACCCATT+GGG | 0.496391 | 1_2:-6295505 | Msa0052080:intron |
| CAGAGTGTTAAGGGTTTCCT+CGG | 0.498400 | 1_2:+6301120 | None:intergenic |
| CAATTCCTTTAACTTCTTGG+TGG | 0.499502 | 1_2:+6297876 | None:intergenic |
| ACTTGGCCATTAGCAATGCC+TGG | 0.503323 | 1_2:+6295633 | None:intergenic |
| GGATGAGAAGAGAACTGTCC+AGG | 0.504809 | 1_2:-6299509 | Msa0052080:intron |
| TCTTCTAGCCGAGATGCATC+AGG | 0.507391 | 1_2:-6297838 | Msa0052080:intron |
| GACAAGCTTCTGGCAAGCTA+TGG | 0.507510 | 1_2:-6295451 | Msa0052080:CDS |
| CATTCTTGCATTTAGTGACA+TGG | 0.508450 | 1_2:+6297104 | None:intergenic |
| CTCAAAACTTCTATGACTCA+TGG | 0.508864 | 1_2:-6300044 | Msa0052080:CDS |
| ACATGAATTGAATAAACGCT+TGG | 0.509616 | 1_2:-6299923 | Msa0052080:CDS |
| GAATATCGTAGTAGGTGCTC+TGG | 0.510635 | 1_2:-6300497 | Msa0052080:CDS |
| CAGCAGCTCTTTCTCTCTAG+AGG | 0.511454 | 1_2:+6298914 | None:intergenic |
| TACGATATTCATGAAGTTCG+CGG | 0.512546 | 1_2:+6300510 | None:intergenic |
| AGTGGTCTTAGTCCTCCAAA+AGG | 0.512838 | 1_2:-6297290 | Msa0052080:CDS |
| TTTCTTACAACAGTGATCCT+AGG | 0.515169 | 1_2:-6295230 | Msa0052080:three_prime_UTR |
| AATGGAAGTGGCAGAAGCCA+TGG | 0.519447 | 1_2:-6295388 | Msa0052080:CDS |
| TGGTGCAGTACAAAGTGAAA+AGG | 0.520685 | 1_2:-6300477 | Msa0052080:CDS |
| ATCTTGCTGCTGGTTCTGAC+GGG | 0.523809 | 1_2:-6299343 | Msa0052080:CDS |
| TTCATTTACTTGTTTCAGCA+TGG | 0.524549 | 1_2:+6297322 | None:intergenic |
| GAAGAAGAAACAAGATAGCC+AGG | 0.525033 | 1_2:-6299151 | Msa0052080:CDS |
| ATTAAAAGCACTCGAAGCCC+AGG | 0.526108 | 1_2:-6299285 | Msa0052080:intron |
| TCAACTCTCTTGCGGACACT+AGG | 0.526415 | 1_2:-6296912 | Msa0052080:intron |
| AGGCAGAACAATTTCGGCAG+TGG | 0.527675 | 1_2:-6298941 | Msa0052080:CDS |
| CAAGAGGAAGGAAGTTGAGA+AGG | 0.527753 | 1_2:-6296486 | Msa0052080:CDS |
| CAGGCGGGCTGCACTTGGAG+AGG | 0.529621 | 1_2:-6297351 | Msa0052080:CDS |
| AACAGCAGAACTGTTATGAT+AGG | 0.530116 | 1_2:-6301303 | Msa0052080:intron |
| GGATCTTACCGAAACTGGCT+TGG | 0.533866 | 1_2:+6296424 | None:intergenic |
| ATCCGTTCAGAAAGTTTCCA+TGG | 0.534353 | 1_2:+6295371 | None:intergenic |
| CACTCAAGCAGCACTTTGGA+AGG | 0.535297 | 1_2:-6299549 | Msa0052080:CDS |
| AATGATTTGCAGGACTCACT+TGG | 0.535891 | 1_2:-6301330 | Msa0052080:intron |
| AAGAACATTTAACTAAGTAC+AGG | 0.538715 | 1_2:-6295194 | Msa0052080:intron |
| AAGGAAGATCATGGAACTTG+AGG | 0.540327 | 1_2:-6299530 | Msa0052080:CDS |
| AGTTAGTTAGTTACAGCATA+CGG | 0.540542 | 1_2:-6294874 | Msa0052080:three_prime_UTR |
| GCGTGATCAGCCATTTGTCG+TGG | 0.541827 | 1_2:-6295269 | Msa0052080:three_prime_UTR |
| GAAGAAGAAACGAATTTGAA+AGG | 0.543337 | 1_2:-6298575 | Msa0052080:CDS |
| CATCAAGGAACCTTTATCTC+CGG | 0.543732 | 1_2:-6295691 | Msa0052080:CDS |
| TTTCATTGACAATTGCCCAA+TGG | 0.545543 | 1_2:+6295490 | None:intergenic |
| ACTAAATACCTGAACTTCAT+CGG | 0.545766 | 1_2:+6300842 | None:intergenic |
| GAACTTTGTGCTCGTTCTGG+TGG | 0.547658 | 1_2:-6300870 | Msa0052080:CDS |
| ATTTATAGATCAAAGTAGAA+AGG | 0.548227 | 1_2:-6295595 | Msa0052080:intron |
| ATTGTATTAGCCACTGATGA+TGG | 0.550043 | 1_2:+6295414 | None:intergenic |
| TAATACAATTCAAATGGAAG+TGG | 0.552376 | 1_2:-6295400 | Msa0052080:CDS |
| AAGCTTCTGGCAAGCTATGG+AGG | 0.552380 | 1_2:-6295448 | Msa0052080:CDS |
| CTTCACTCATTGGATAGTCG+GGG | 0.556388 | 1_2:+6300177 | None:intergenic |
| ATATATGTTCAACTCTCTTG+CGG | 0.557483 | 1_2:-6296920 | Msa0052080:CDS |
| ATGCTGCTGATTCCCTCACT+TGG | 0.557504 | 1_2:+6295616 | None:intergenic |
| GCCAAGAAATTCTTTCCTTG+AGG | 0.557551 | 1_2:+6300558 | None:intergenic |
| CAATTATTTGATAACTGTCA+GGG | 0.557777 | 1_2:+6294823 | None:intergenic |
| TAAACTACAGGTGTCAAATG+TGG | 0.560150 | 1_2:-6296583 | Msa0052080:intron |
| GCACTTTGGAAGGAAGATCA+TGG | 0.561078 | 1_2:-6299539 | Msa0052080:CDS |
| GTATTGACCCAGACTGATAG+AGG | 0.563957 | 1_2:+6294923 | None:intergenic |
| TTGATGCAGATGGTACCCAT+TGG | 0.564529 | 1_2:-6295506 | Msa0052080:intron |
| TATTTCGGATATTGCGTGCA+CGG | 0.564572 | 1_2:+6301086 | None:intergenic |
| AACTTCATGAATATCGTAGT+AGG | 0.566084 | 1_2:-6300505 | Msa0052080:CDS |
| GCCAGGTACAATTGCAACAA+AGG | 0.566601 | 1_2:-6298974 | Msa0052080:intron |
| AGAACAATTTCGGCAGTGGA+AGG | 0.566753 | 1_2:-6298937 | Msa0052080:CDS |
| TCAAATGTGGGAGAAGGACA+TGG | 0.567867 | 1_2:-6296570 | Msa0052080:CDS |
| GTGATCAACCCACCGTTGCA+AGG | 0.568414 | 1_2:+6297514 | None:intergenic |
| GATTTGCAGGACTCACTTGG+TGG | 0.568979 | 1_2:-6301327 | Msa0052080:intron |
| AGCACACAGGCTAGGAGAGG+GGG | 0.569434 | 1_2:+6294526 | None:intergenic |
| AAACTACAGGTGTCAAATGT+GGG | 0.571725 | 1_2:-6296582 | Msa0052080:intron |
| CTGAGGCAGAAGAACGAGAA+CGG | 0.572667 | 1_2:-6297008 | Msa0052080:CDS |
| TAAACGCTTGGAGCAGAAAG+AGG | 0.572986 | 1_2:-6299911 | Msa0052080:intron |
| TATCCAATGAGTGAAGCAAC+GGG | 0.574685 | 1_2:-6300170 | Msa0052080:intron |
| CAAGCACACAGGCTAGGAGA+GGG | 0.577772 | 1_2:+6294524 | None:intergenic |
| GTATATACCTCTATCAGTCT+GGG | 0.581159 | 1_2:-6294930 | Msa0052080:three_prime_UTR |
| TTTCAACTTCAGCCAAAAGA+CGG | 0.583433 | 1_2:+6299366 | None:intergenic |
| CCTTCACTAATCGTGGACAC+TGG | 0.584818 | 1_2:-6296984 | Msa0052080:CDS |
| AGAAATGAAAGATCAAATCA+GGG | 0.585288 | 1_2:-6296540 | Msa0052080:CDS |
| ACTGGCTATGTAGGTCCTCA+AGG | 0.585452 | 1_2:-6300573 | Msa0052080:intron |
| AAAGTTTGTAGTCTACCATA+CGG | 0.586388 | 1_2:-6294470 | Msa0052080:three_prime_UTR |
| TTAATCATCTCATTGGACAT+CGG | 0.586506 | 1_2:+6300924 | None:intergenic |
| AAGGGAAGAACGGATTTGCT+AGG | 0.587045 | 1_2:-6297271 | Msa0052080:intron |
| GTGGTCTTAGTCCTCCAAAA+GGG | 0.588275 | 1_2:-6297289 | Msa0052080:CDS |
| AAGTCATACCTGATGCATCT+CGG | 0.588976 | 1_2:+6297830 | None:intergenic |
| TACGGCAAAGCGAGATCAAG+AGG | 0.592696 | 1_2:-6296502 | Msa0052080:CDS |
| AGTTATCAAATAATTGAGCA+TGG | 0.594964 | 1_2:-6294816 | Msa0052080:three_prime_UTR |
| ACATGATTAGGAGAAGTGCT+TGG | 0.595961 | 1_2:-6302063 | Msa0052080:CDS |
| TGATCACGAGCTAGAAGTCA+TGG | 0.598324 | 1_2:-6297498 | Msa0052080:CDS |
| CTTCTGGCAAGCTATGGAGG+TGG | 0.598981 | 1_2:-6295445 | Msa0052080:CDS |
| ACACTCTGTAGACGACATCA+AGG | 0.598982 | 1_2:-6295706 | Msa0052080:CDS |
| TCCTGCTGACATTAATGCCG+AGG | 0.601534 | 1_2:-6301137 | Msa0052080:CDS |
| ATGAGACGATGATGAGAGCA+AGG | 0.602763 | 1_2:-6295337 | Msa0052080:CDS |
| CATATCATCTAATTCACTTG+TGG | 0.602900 | 1_2:-6297049 | Msa0052080:CDS |
| CTATCCAATGAGTGAAGCAA+CGG | 0.605530 | 1_2:-6300171 | Msa0052080:CDS |
| GGGAACTTGTAGGTCTACTA+CGG | 0.607471 | 1_2:-6296520 | Msa0052080:CDS |
| GTAGTTACAATGAATGGGAG+TGG | 0.607541 | 1_2:-6297646 | Msa0052080:intron |
| AGCCATGGAAACTTTCTGAA+CGG | 0.607658 | 1_2:-6295373 | Msa0052080:CDS |
| ACAAGCACACAGGCTAGGAG+AGG | 0.608260 | 1_2:+6294523 | None:intergenic |
| GCTAGATGATGCAACCACAT+TGG | 0.610741 | 1_2:-6296447 | Msa0052080:CDS |
| AGTCCTCCAAAAGGGAAGAA+CGG | 0.612101 | 1_2:-6297281 | Msa0052080:CDS |
| CATTGCTAATGGCCAAGTGA+GGG | 0.612831 | 1_2:-6295628 | Msa0052080:CDS |
| TGAGAAGTCCTTGCAACGGT+GGG | 0.614533 | 1_2:-6297522 | Msa0052080:CDS |
| AAGCACACAGGCTAGGAGAG+GGG | 0.614614 | 1_2:+6294525 | None:intergenic |
| GAACGGGCCTTCACTAATCG+TGG | 0.616221 | 1_2:-6296991 | Msa0052080:CDS |
| AAGACTGATGGACTTAAAAG+GGG | 0.618179 | 1_2:-6300215 | Msa0052080:CDS |
| TTCACTCATTGGATAGTCGG+GGG | 0.618297 | 1_2:+6300178 | None:intergenic |
| GTAAATGAATTTGCTGCCAG+TGG | 0.619263 | 1_2:-6297308 | Msa0052080:CDS |
| AATGGCTTCTCAACTATCTG+AGG | 0.620100 | 1_2:-6297025 | Msa0052080:CDS |
| TACACACAAGCACACAGGCT+AGG | 0.622160 | 1_2:+6294518 | None:intergenic |
| GCATTGCTAATGGCCAAGTG+AGG | 0.623226 | 1_2:-6295629 | Msa0052080:CDS |
| ATGTACAATGTAAAGACTGA+TGG | 0.625277 | 1_2:-6300227 | Msa0052080:CDS |
| GCAACAAAGGATAAAACAAG+AGG | 0.626597 | 1_2:-6298961 | Msa0052080:CDS |
| CCAGTGTCCACGATTAGTGA+AGG | 0.632081 | 1_2:+6296984 | None:intergenic |
| GCAAAGCGAGATCAAGAGGA+AGG | 0.634660 | 1_2:-6296498 | Msa0052080:CDS |
| ATGAGAAGTCCTTGCAACGG+TGG | 0.637273 | 1_2:-6297523 | Msa0052080:CDS |
| GGAAAAGGAGCCATCATCAG+TGG | 0.643577 | 1_2:-6295424 | Msa0052080:CDS |
| CGAAACTGGCTTGGCCAATG+TGG | 0.646367 | 1_2:+6296433 | None:intergenic |
| CAGGTGTCAAATGTGGGAGA+AGG | 0.651873 | 1_2:-6296576 | Msa0052080:CDS |
| CAAGTCTTGAAAATGTGTCG+AGG | 0.654976 | 1_2:-6294678 | Msa0052080:three_prime_UTR |
| TGAAGAAGTAGCGAAAGAGT+GGG | 0.656878 | 1_2:-6299983 | Msa0052080:CDS |
| AAACAGCGCAAATATACACC+AGG | 0.669804 | 1_2:-6295651 | Msa0052080:CDS |
| CGGGCAAACACACAAATCAG+AGG | 0.672647 | 1_2:-6299324 | Msa0052080:CDS |
| TCATTTACACACAAGCACAC+AGG | 0.673880 | 1_2:+6294513 | None:intergenic |
| GCAATGAGAAGTCCTTGCAA+CGG | 0.682235 | 1_2:-6297526 | Msa0052080:CDS |
| TGAGGCAAAGTATGTGAACG+TGG | 0.706746 | 1_2:+6295314 | None:intergenic |
| AATGTCAGCAGGACTTACGC+AGG | 0.708970 | 1_2:+6301147 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATCATTATTTTTTATTT+TGG | + | chr1_2:6296778-6296797 | None:intergenic | 10.0% |
| !! | GTTATTTATAATTATTTACA+AGG | + | chr1_2:6298502-6298521 | None:intergenic | 10.0% |
| !! | ACAATTACAATATTAAAATT+GGG | + | chr1_2:6298771-6298790 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTATTTTGATTAT+GGG | + | chr1_2:6300221-6300240 | None:intergenic | 10.0% |
| !!! | ATTTTTGTTTATTTTGATTA+TGG | + | chr1_2:6300222-6300241 | None:intergenic | 10.0% |
| !!! | ACTTTTTATCTATAAATTTT+AGG | - | chr1_2:6300242-6300261 | Msa0052080:intron | 10.0% |
| !!! | CTTTTTATCTATAAATTTTA+GGG | - | chr1_2:6300243-6300262 | Msa0052080:intron | 10.0% |
| !! | TGTCTATAATATTAATACAT+AGG | + | chr1_2:6295459-6295478 | None:intergenic | 15.0% |
| !!! | TTTTAATATTTTCCTGTAAT+AGG | - | chr1_2:6295652-6295671 | Msa0052080:CDS | 15.0% |
| !! | AATGTTTATGATGATAATAA+TGG | + | chr1_2:6296125-6296144 | None:intergenic | 15.0% |
| !! | TAATTATATTATTTATCGCA+AGG | - | chr1_2:6296731-6296750 | Msa0052080:intron | 15.0% |
| !! | AATTATATTATTTATCGCAA+GGG | - | chr1_2:6296732-6296751 | Msa0052080:intron | 15.0% |
| !! | GAAAAAAATATACAAAAAAG+AGG | + | chr1_2:6297575-6297594 | None:intergenic | 15.0% |
| !!! | GTATATTTTTTTCATTTCAT+TGG | - | chr1_2:6297582-6297601 | Msa0052080:intron | 15.0% |
| !! | CAAAAATATTAAGTAGAATA+AGG | + | chr1_2:6297970-6297989 | None:intergenic | 15.0% |
| !!! | CATTATTTTATGATGTAATT+TGG | - | chr1_2:6298339-6298358 | Msa0052080:intron | 15.0% |
| !! | AAATAACTGAATATTTATTC+AGG | - | chr1_2:6298515-6298534 | Msa0052080:intron | 15.0% |
| !! | GACAATTACAATATTAAAAT+TGG | + | chr1_2:6298772-6298791 | None:intergenic | 15.0% |
| !! | AGAAAAAATTTAAATATCTG+GGG | + | chr1_2:6299574-6299593 | None:intergenic | 15.0% |
| !! | GAGAAAAAATTTAAATATCT+GGG | + | chr1_2:6299575-6299594 | None:intergenic | 15.0% |
| !!! | AAACCATTTATTTTATTCAT+AGG | - | chr1_2:6299685-6299704 | Msa0052080:intron | 15.0% |
| !! | CTAAGAATTTGAAAATAAAT+TGG | - | chr1_2:6300072-6300091 | Msa0052080:intron | 15.0% |
| !! | GTATATTATTTGAACTTTGA+AGG | + | chr1_2:6294580-6294599 | None:intergenic | 20.0% |
| !! | GATGATAAAACAAATAAAAG+AGG | - | chr1_2:6294995-6295014 | Msa0052080:intron | 20.0% |
| !! | AAATATATAGATTTGGATAG+AGG | + | chr1_2:6295186-6295205 | None:intergenic | 20.0% |
| !!! | TATATTTTTCCTCCTATTAT+TGG | - | chr1_2:6295199-6295218 | Msa0052080:three_prime_UTR | 20.0% |
| !! | ATCAATTGCATATATTGATA+TGG | - | chr1_2:6295817-6295836 | Msa0052080:intron | 20.0% |
| !!! | AAAATAAAAAGCACATATCT+AGG | + | chr1_2:6296071-6296090 | None:intergenic | 20.0% |
| !!! | TAGATATGTGCTTTTTATTT+TGG | - | chr1_2:6296070-6296089 | Msa0052080:intron | 20.0% |
| !!! | TGCTTTTTATTTTGGTATTT+GGG | - | chr1_2:6296078-6296097 | Msa0052080:intron | 20.0% |
| !!! | ATTTTATTAACATGCGTATT+CGG | - | chr1_2:6296822-6296841 | Msa0052080:intron | 20.0% |
| !! | AATATTAAGTAGAATAAGGT+TGG | + | chr1_2:6297966-6297985 | None:intergenic | 20.0% |
| !! | ATATATATTGTACAAGTCAT+TGG | - | chr1_2:6298006-6298025 | Msa0052080:intron | 20.0% |
| !! | TATATATTGTACAAGTCATT+GGG | - | chr1_2:6298007-6298026 | Msa0052080:intron | 20.0% |
| !! | TGCAAAATATTAATTTAGAG+AGG | - | chr1_2:6298182-6298201 | Msa0052080:intron | 20.0% |
| !!! | TTCTTTAGAAAAAGAATGAA+TGG | - | chr1_2:6298423-6298442 | Msa0052080:intron | 20.0% |
| !! | TCCTAACCAAAAAATAATAT+TGG | + | chr1_2:6298468-6298487 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTAAATGCGTAC+CGG | - | chr1_2:6298689-6298708 | Msa0052080:intron | 20.0% |
| !!! | CATATATTGAAGCAAAATTT+TGG | + | chr1_2:6299514-6299533 | None:intergenic | 20.0% |
| !! | GAAAAAATTTAAATATCTGG+GGG | + | chr1_2:6299573-6299592 | None:intergenic | 20.0% |
| !! | GGAGAAAAAATTTAAATATC+TGG | + | chr1_2:6299576-6299595 | None:intergenic | 20.0% |
| !!! | GATATTTAAATTTTTTCTCC+TGG | - | chr1_2:6299576-6299595 | Msa0052080:CDS | 20.0% |
| !! | CTTCCTATGAATAAAATAAA+TGG | + | chr1_2:6299691-6299710 | None:intergenic | 20.0% |
| !! | AAAATAAAGTAGAGATATAG+AGG | - | chr1_2:6299775-6299794 | Msa0052080:intron | 20.0% |
| !! | AAATAAAGTAGAGATATAGA+GGG | - | chr1_2:6299776-6299795 | Msa0052080:intron | 20.0% |
| !! | TGTTAAATTTGATGTATGAA+AGG | - | chr1_2:6299840-6299859 | Msa0052080:intron | 20.0% |
| !!! | TTTCTTTTGAATTTTAAGAC+AGG | + | chr1_2:6300047-6300066 | None:intergenic | 20.0% |
| !! | AGATTTATAGTTTCATTCTA+GGG | + | chr1_2:6300131-6300150 | None:intergenic | 20.0% |
| !! | TAGATTTATAGTTTCATTCT+AGG | + | chr1_2:6300132-6300151 | None:intergenic | 20.0% |
| !! | ATTTATAGATCAAAGTAGAA+AGG | - | chr1_2:6300852-6300871 | Msa0052080:CDS | 20.0% |
| !! | ATATAATTTGAAAGCTTGTA+TGG | + | chr1_2:6301326-6301345 | None:intergenic | 20.0% |
| !!! | ATATTTGTGTTAAATGGATT+CGG | + | chr1_2:6301353-6301372 | None:intergenic | 20.0% |
| !! | TGATACATATTTGTGTTAAA+TGG | + | chr1_2:6301359-6301378 | None:intergenic | 20.0% |
| !! | TATTTCCAGACAAATTATAT+TGG | - | chr1_2:6301688-6301707 | Msa0052080:intron | 20.0% |
| !!! | AATTTCCAATATAATTTGTC+TGG | + | chr1_2:6301696-6301715 | None:intergenic | 20.0% |
| !! | TTTCTTACATCATTTGTAAA+AGG | - | chr1_2:6302023-6302042 | Msa0052080:intron | 20.0% |
| ! | TTGGAAAAAAGCAAATTCTT+TGG | - | chr1_2:6294403-6294422 | Msa0052080:three_prime_UTR | 25.0% |
| !!! | AATTTGCATTTTGGGTATAT+AGG | + | chr1_2:6294461-6294480 | None:intergenic | 25.0% |
| ! | ATATACCCAAAATGCAAATT+TGG | - | chr1_2:6294461-6294480 | Msa0052080:three_prime_UTR | 25.0% |
| !!! | TTAGACTTTGTTTTAGAGTT+TGG | - | chr1_2:6294649-6294668 | Msa0052080:three_prime_UTR | 25.0% |
| !!! | TAGACTTTGTTTTAGAGTTT+GGG | - | chr1_2:6294650-6294669 | Msa0052080:three_prime_UTR | 25.0% |
| !! | GTTGATGAATATTGAGTAAT+GGG | + | chr1_2:6294869-6294888 | None:intergenic | 25.0% |
| !! | TGTTGATGAATATTGAGTAA+TGG | + | chr1_2:6294870-6294889 | None:intergenic | 25.0% |
| !! | TGTTAAGTTAAATGATTTGC+AGG | - | chr1_2:6295107-6295126 | Msa0052080:intron | 25.0% |
| ! | GGAGGAAAAATATATAGATT+TGG | + | chr1_2:6295193-6295212 | None:intergenic | 25.0% |
| !!! | TTTTGAAGCTAATCATTTGA+GGG | + | chr1_2:6295225-6295244 | None:intergenic | 25.0% |
| !!! | TTTTTGAAGCTAATCATTTG+AGG | + | chr1_2:6295226-6295245 | None:intergenic | 25.0% |
| ! | AAAATCATATCCAATCTTCA+TGG | - | chr1_2:6295242-6295261 | Msa0052080:three_prime_UTR | 25.0% |
| !! | GTTTTTCCAAATGAATGAAA+GGG | + | chr1_2:6295421-6295440 | None:intergenic | 25.0% |
| !! | AGTTTTTCCAAATGAATGAA+AGG | + | chr1_2:6295422-6295441 | None:intergenic | 25.0% |
| ! | TTTGGAAAAACTGAGATAAT+TGG | - | chr1_2:6295430-6295449 | Msa0052080:CDS | 25.0% |
| ! | TTTACAAGTTCTGTAAATAG+AGG | + | chr1_2:6295783-6295802 | None:intergenic | 25.0% |
| !!! | GTGCTTTTTATTTTGGTATT+TGG | - | chr1_2:6296077-6296096 | Msa0052080:intron | 25.0% |
| !!! | TTTCAAACCTTCATTTTTTC+AGG | - | chr1_2:6296189-6296208 | Msa0052080:intron | 25.0% |
| !! | ACTTGACTAAATTTAAGACA+TGG | + | chr1_2:6296377-6296396 | None:intergenic | 25.0% |
| !!! | TTACAATTACCAATTTTAGC+AGG | - | chr1_2:6296426-6296445 | Msa0052080:intron | 25.0% |
| !!! | TACAATTACCAATTTTAGCA+GGG | - | chr1_2:6296427-6296446 | Msa0052080:intron | 25.0% |
| ! | ATAATGATGAAAACATCAAG+TGG | - | chr1_2:6296787-6296806 | Msa0052080:intron | 25.0% |
| !!! | TTCGAGTGCTTTTAATTTTT+GGG | + | chr1_2:6297158-6297177 | None:intergenic | 25.0% |
| ! | AATATATGAATGCTAGATTC+TGG | - | chr1_2:6297269-6297288 | Msa0052080:intron | 25.0% |
| ! | TAGATTGTATTTCATCTTGA+AGG | + | chr1_2:6297368-6297387 | None:intergenic | 25.0% |
| ! | GCAAACATATAGTTAATAGA+AGG | + | chr1_2:6297832-6297851 | None:intergenic | 25.0% |
| ! | ATATATTGTACAAGTCATTG+GGG | - | chr1_2:6298008-6298027 | Msa0052080:intron | 25.0% |
| !! | TAGTAACTCAAATTTTCCAA+CGG | + | chr1_2:6298047-6298066 | None:intergenic | 25.0% |
| ! | TTACATGAGTACATGTTAAA+TGG | + | chr1_2:6298091-6298110 | None:intergenic | 25.0% |
| ! | ATTTAACATGTACTCATGTA+AGG | - | chr1_2:6298090-6298109 | Msa0052080:intron | 25.0% |
| ! | ATCTGAAAAATATACTCTTC+TGG | + | chr1_2:6298159-6298178 | None:intergenic | 25.0% |
| !!! | GACAACATGTCATTTTAATT+TGG | + | chr1_2:6298370-6298389 | None:intergenic | 25.0% |
| !!! | GCCAATATTATTTTTTGGTT+AGG | - | chr1_2:6298464-6298483 | Msa0052080:intron | 25.0% |
| !! | TAACAATTCCTTTAACTTCT+TGG | + | chr1_2:6298577-6298596 | None:intergenic | 25.0% |
| !!! | CTTTCAAGTTTTTTAAGCTA+AGG | - | chr1_2:6298658-6298677 | Msa0052080:intron | 25.0% |
| ! | ATGGTTTATTCACTAAAAGA+GGG | + | chr1_2:6298725-6298744 | None:intergenic | 25.0% |
| !! | TTTTAGTGAATAAACCATGA+GGG | - | chr1_2:6298727-6298746 | Msa0052080:intron | 25.0% |
| ! | TATGTTGTAGTTACAATGAA+TGG | - | chr1_2:6298795-6298814 | Msa0052080:intron | 25.0% |
| ! | ATGTTGTAGTTACAATGAAT+GGG | - | chr1_2:6298796-6298815 | Msa0052080:intron | 25.0% |
| ! | ATCAGTAAGAAACATAGATT+AGG | + | chr1_2:6299037-6299056 | None:intergenic | 25.0% |
| !!! | TCTTCAGCTTTTGAAAATAT+CGG | - | chr1_2:6299235-6299254 | Msa0052080:intron | 25.0% |
| !!! | AATGGTTTGTTGAATTGAAT+CGG | + | chr1_2:6299673-6299692 | None:intergenic | 25.0% |
| ! | AGAAATGAAAGATCAAATCA+GGG | - | chr1_2:6299907-6299926 | Msa0052080:intron | 25.0% |
| ! | ACTATCAAAAGTAACAACTT+AGG | - | chr1_2:6300156-6300175 | Msa0052080:intron | 25.0% |
| !! | TTATAGTTGTCATTTCTATG+AGG | + | chr1_2:6300371-6300390 | None:intergenic | 25.0% |
| !! | GGGATGTGTAAAATTTTATT+TGG | + | chr1_2:6300490-6300509 | None:intergenic | 25.0% |
| ! | TATATGAAATCCGGTAAATA+GGG | + | chr1_2:6300510-6300529 | None:intergenic | 25.0% |
| ! | ATATATGAAATCCGGTAAAT+AGG | + | chr1_2:6300511-6300530 | None:intergenic | 25.0% |
| ! | CATGACAATTAAAATACTAG+TGG | + | chr1_2:6300889-6300908 | None:intergenic | 25.0% |
| !! | TAATTGTCATGTCTTTTCAT+TGG | - | chr1_2:6300898-6300917 | Msa0052080:CDS | 25.0% |
| ! | TAATACAATTCAAATGGAAG+TGG | - | chr1_2:6301047-6301066 | Msa0052080:intron | 25.0% |
| !! | TATCAAATTCACTTGATTTG+AGG | + | chr1_2:6301154-6301173 | None:intergenic | 25.0% |
| ! | AAGAACATTTAACTAAGTAC+AGG | - | chr1_2:6301253-6301272 | Msa0052080:intron | 25.0% |
| !! | ATCTTAGCTTCTTTTATAGA+TGG | - | chr1_2:6301436-6301455 | Msa0052080:intron | 25.0% |
| !!! | ATGGAATCATTTTCAAGATT+GGG | + | chr1_2:6301553-6301572 | None:intergenic | 25.0% |
| !!! | TATGGAATCATTTTCAAGAT+TGG | + | chr1_2:6301554-6301573 | None:intergenic | 25.0% |
| !! | CAATTATTTGATAACTGTCA+GGG | + | chr1_2:6301627-6301646 | None:intergenic | 25.0% |
| !! | TCAATTATTTGATAACTGTC+AGG | + | chr1_2:6301628-6301647 | None:intergenic | 25.0% |
| ! | AGTTATCAAATAATTGAGCA+TGG | - | chr1_2:6301631-6301650 | Msa0052080:intron | 25.0% |
| !! | TCCTTAATGTTATGTTTCTA+TGG | - | chr1_2:6301800-6301819 | Msa0052080:intron | 25.0% |
| ! | ACCATAGAAACATAACATTA+AGG | + | chr1_2:6301804-6301823 | None:intergenic | 25.0% |
| ! | AGCAAATTCTTTGGTAATAG+TGG | - | chr1_2:6294412-6294431 | Msa0052080:three_prime_UTR | 30.0% |
| ! | GCAAATTCTTTGGTAATAGT+GGG | - | chr1_2:6294413-6294432 | Msa0052080:three_prime_UTR | 30.0% |
| ! | ACCAACCAAATTTGCATTTT+GGG | + | chr1_2:6294469-6294488 | None:intergenic | 30.0% |
| ACTCAATACATCTACAACTA+GGG | - | chr1_2:6294493-6294512 | Msa0052080:three_prime_UTR | 30.0% | |
| ! | TATTTGAACTTTGAAGGCAA+AGG | + | chr1_2:6294574-6294593 | None:intergenic | 30.0% |
| !!! | AGACTTTGTTTTAGAGTTTG+GGG | - | chr1_2:6294651-6294670 | Msa0052080:three_prime_UTR | 30.0% |
| AATAAAAGCTCCATGAAGAT+TGG | + | chr1_2:6295255-6295274 | None:intergenic | 30.0% | |
| TACTTACGATAGGCTTATTT+CGG | + | chr1_2:6295379-6295398 | None:intergenic | 30.0% | |
| TTTGTTCCCTTTCATTCATT+TGG | - | chr1_2:6295412-6295431 | Msa0052080:CDS | 30.0% | |
| TTAATCATCTCATTGGACAT+CGG | + | chr1_2:6295526-6295545 | None:intergenic | 30.0% | |
| !! | TCGCATTTTAATCATCTCAT+TGG | + | chr1_2:6295533-6295552 | None:intergenic | 30.0% |
| ACTAAATACCTGAACTTCAT+CGG | + | chr1_2:6295608-6295627 | None:intergenic | 30.0% | |
| ! | ATTTTCCTGTAATAGGTAAG+TGG | - | chr1_2:6295659-6295678 | Msa0052080:CDS | 30.0% |
| ATCCTAACCTCAAATGTAAT+TGG | - | chr1_2:6295756-6295775 | Msa0052080:intron | 30.0% | |
| TCCTAACCTCAAATGTAATT+GGG | - | chr1_2:6295757-6295776 | Msa0052080:intron | 30.0% | |
| ! | ATATATAACCGTTTTGTCAC+TGG | - | chr1_2:6295856-6295875 | Msa0052080:intron | 30.0% |
| AACTTCATGAATATCGTAGT+AGG | - | chr1_2:6295942-6295961 | Msa0052080:intron | 30.0% | |
| ATGTACAATGTAAAGACTGA+TGG | - | chr1_2:6296220-6296239 | Msa0052080:intron | 30.0% | |
| !! | TAAAGACTGATGGACTTAAA+AGG | - | chr1_2:6296230-6296249 | Msa0052080:intron | 30.0% |
| !! | AAAGACTGATGGACTTAAAA+GGG | - | chr1_2:6296231-6296250 | Msa0052080:intron | 30.0% |
| !! | ACAATTACCAATTTTAGCAG+GGG | - | chr1_2:6296428-6296447 | Msa0052080:intron | 30.0% |
| TACACTTCTTCAAAACAGTA+TGG | - | chr1_2:6296491-6296510 | Msa0052080:CDS | 30.0% | |
| ACATGAATTGAATAAACGCT+TGG | - | chr1_2:6296524-6296543 | Msa0052080:CDS | 30.0% | |
| !! | CGTTGATTTAAAGGGTTATT+AGG | + | chr1_2:6296609-6296628 | None:intergenic | 30.0% |
| !!! | CTTCGAGTGCTTTTAATTTT+TGG | + | chr1_2:6297159-6297178 | None:intergenic | 30.0% |
| TGAAAAACACTATTTCACCT+GGG | + | chr1_2:6297182-6297201 | None:intergenic | 30.0% | |
| ATGAAAAACACTATTTCACC+TGG | + | chr1_2:6297183-6297202 | None:intergenic | 30.0% | |
| ACAATCTATAAAAGCCCAAA+AGG | - | chr1_2:6297380-6297399 | Msa0052080:intron | 30.0% | |
| ! | AGTACAACAATCAACCTTTT+GGG | + | chr1_2:6297397-6297416 | None:intergenic | 30.0% |
| ! | AAGTACAACAATCAACCTTT+TGG | + | chr1_2:6297398-6297417 | None:intergenic | 30.0% |
| GCTTGAACTTAAATGATATG+TGG | - | chr1_2:6297678-6297697 | Msa0052080:intron | 30.0% | |
| ! | ATTGAGTTGTTTGAAAGCTT+TGG | + | chr1_2:6297708-6297727 | None:intergenic | 30.0% |
| AGCTTTCAAACAACTCAATT+TGG | - | chr1_2:6297709-6297728 | Msa0052080:intron | 30.0% | |
| GCTTTCAAACAACTCAATTT+GGG | - | chr1_2:6297710-6297729 | Msa0052080:intron | 30.0% | |
| GCTAAACAGTTAAAGAAAGA+AGG | - | chr1_2:6297850-6297869 | Msa0052080:CDS | 30.0% | |
| GAAGAAGAAACGAATTTGAA+AGG | - | chr1_2:6297872-6297891 | Msa0052080:CDS | 30.0% | |
| !! | AGTATTCTAAAGTTGTTGGA+TGG | - | chr1_2:6297934-6297953 | Msa0052080:intron | 30.0% |
| ATTAAGTAGAATAAGGTTGG+CGG | + | chr1_2:6297963-6297982 | None:intergenic | 30.0% | |
| ACATATGAATAACGAATCGA+AGG | + | chr1_2:6298228-6298247 | None:intergenic | 30.0% | |
| CATGGTTTATTCACTAAAAG+AGG | + | chr1_2:6298726-6298745 | None:intergenic | 30.0% | |
| ! | CTTTTAGTGAATAAACCATG+AGG | - | chr1_2:6298726-6298745 | Msa0052080:intron | 30.0% |
| TTCATTTACTTGTTTCAGCA+TGG | + | chr1_2:6299128-6299147 | None:intergenic | 30.0% | |
| ! | GATATTTTCAAAAGCTGAAG+AGG | + | chr1_2:6299236-6299255 | None:intergenic | 30.0% |
| CATATCATCTAATTCACTTG+TGG | - | chr1_2:6299398-6299417 | Msa0052080:intron | 30.0% | |
| ATATATGTTCAACTCTCTTG+CGG | - | chr1_2:6299527-6299546 | Msa0052080:CDS | 30.0% | |
| TGTATGAAAGGTTAAACTAC+AGG | - | chr1_2:6299852-6299871 | Msa0052080:intron | 30.0% | |
| GAGAAATGAAAGATCAAATC+AGG | - | chr1_2:6299906-6299925 | Msa0052080:intron | 30.0% | |
| AAGTAACAACTTAGGTAAGT+AGG | - | chr1_2:6300164-6300183 | Msa0052080:intron | 30.0% | |
| !! | AATTCCACTATTTTTCCCTT+AGG | - | chr1_2:6300268-6300287 | Msa0052080:intron | 30.0% |
| !! | ATTCCACTATTTTTCCCTTA+GGG | - | chr1_2:6300269-6300288 | Msa0052080:intron | 30.0% |
| CATAATTTCAGTATCCCTAA+GGG | + | chr1_2:6300286-6300305 | None:intergenic | 30.0% | |
| ACATAATTTCAGTATCCCTA+AGG | + | chr1_2:6300287-6300306 | None:intergenic | 30.0% | |
| ! | CATTTTCAGATATCAAGACA+GGG | + | chr1_2:6300312-6300331 | None:intergenic | 30.0% |
| ! | ACATTTTCAGATATCAAGAC+AGG | + | chr1_2:6300313-6300332 | None:intergenic | 30.0% |
| TGTCTTGATATCTGAAAATG+TGG | - | chr1_2:6300312-6300331 | Msa0052080:intron | 30.0% | |
| ! | TTTTACACATCCCTATTTAC+CGG | - | chr1_2:6300497-6300516 | Msa0052080:CDS | 30.0% |
| CTACGAAGATATATGAAATC+CGG | + | chr1_2:6300519-6300538 | None:intergenic | 30.0% | |
| ATCACAAAATATCAGCTACA+AGG | + | chr1_2:6300583-6300602 | None:intergenic | 30.0% | |
| GACTAATTAGCTAATGACAA+TGG | + | chr1_2:6300680-6300699 | None:intergenic | 30.0% | |
| ! | ACAGAGTGTTTCAATGAATT+TGG | + | chr1_2:6300730-6300749 | None:intergenic | 30.0% |
| !! | AGATTTGTTATTGATGCAGA+TGG | - | chr1_2:6300931-6300950 | Msa0052080:CDS | 30.0% |
| AGTGGCTAATACAATTCAAA+TGG | - | chr1_2:6301041-6301060 | Msa0052080:intron | 30.0% | |
| AAAGAAGCTAAGATTGTGTT+TGG | + | chr1_2:6301430-6301449 | None:intergenic | 30.0% | |
| !! | TGGAATCATTTTCAAGATTG+GGG | + | chr1_2:6301552-6301571 | None:intergenic | 30.0% |
| ATGCTGTAACTAACTAACTA+TGG | + | chr1_2:6301572-6301591 | None:intergenic | 30.0% | |
| AGTTAGTTAGTTACAGCATA+CGG | - | chr1_2:6301573-6301592 | Msa0052080:intron | 30.0% | |
| ! | TTTTGTCACATAGTAACAGA+AGG | - | chr1_2:6301881-6301900 | Msa0052080:intron | 30.0% |
| AAAGTTTGTAGTCTACCATA+CGG | - | chr1_2:6301977-6301996 | Msa0052080:intron | 30.0% | |
| ! | CTTTTACAACAAAATCCGTA+TGG | + | chr1_2:6301995-6302014 | None:intergenic | 30.0% |
| ! | AATTCTTTGGTAATAGTGGG+TGG | - | chr1_2:6294416-6294435 | Msa0052080:three_prime_UTR | 35.0% |
| ACCCAAAATGCAAATTTGGT+TGG | - | chr1_2:6294465-6294484 | Msa0052080:three_prime_UTR | 35.0% | |
| ! | GACCAACCAAATTTGCATTT+TGG | + | chr1_2:6294470-6294489 | None:intergenic | 35.0% |
| GACTCAATACATCTACAACT+AGG | - | chr1_2:6294492-6294511 | Msa0052080:three_prime_UTR | 35.0% | |
| !!! | CTACAACTAGGGTTTTATTC+AGG | - | chr1_2:6294504-6294523 | Msa0052080:three_prime_UTR | 35.0% |
| TCATGATGTATATTGACCCA+TGG | - | chr1_2:6294618-6294637 | Msa0052080:three_prime_UTR | 35.0% | |
| TTTGGGGAAACGAAAATAGA+AGG | - | chr1_2:6294667-6294686 | Msa0052080:three_prime_UTR | 35.0% | |
| ACGAAAATAGAAGGATTTCG+AGG | - | chr1_2:6294676-6294695 | Msa0052080:three_prime_UTR | 35.0% | |
| CGAAAATAGAAGGATTTCGA+GGG | - | chr1_2:6294677-6294696 | Msa0052080:three_prime_UTR | 35.0% | |
| ! | TTCGAGGGTGTGAATATAAT+AGG | - | chr1_2:6294692-6294711 | Msa0052080:three_prime_UTR | 35.0% |
| ! | GAATATTGAGTAATGGGAAC+TGG | + | chr1_2:6294863-6294882 | None:intergenic | 35.0% |
| AAAGAGGAAAAAACGTACGA+AGG | - | chr1_2:6295011-6295030 | Msa0052080:intron | 35.0% | |
| AACAGCAGAACTGTTATGAT+AGG | - | chr1_2:6295144-6295163 | Msa0052080:intron | 35.0% | |
| TATAGATTTGGATAGAGGCA+AGG | + | chr1_2:6295181-6295200 | None:intergenic | 35.0% | |
| ATCATTTGAGGGCCAATAAT+AGG | + | chr1_2:6295214-6295233 | None:intergenic | 35.0% | |
| ! | TGCATACTTCAGAGTGTTAA+GGG | + | chr1_2:6295339-6295358 | None:intergenic | 35.0% |
| ! | TTGCATACTTCAGAGTGTTA+AGG | + | chr1_2:6295340-6295359 | None:intergenic | 35.0% |
| CTTATGCAGATACTTACGAT+AGG | + | chr1_2:6295389-6295408 | None:intergenic | 35.0% | |
| !!! | TGTTTTGTTTATTGTGCCAC+AGG | - | chr1_2:6295489-6295508 | Msa0052080:CDS | 35.0% |
| TCCTCAAGGAAAGAATTTCT+TGG | - | chr1_2:6295888-6295907 | Msa0052080:intron | 35.0% | |
| TACGATATTCATGAAGTTCG+CGG | + | chr1_2:6295940-6295959 | None:intergenic | 35.0% | |
| CATCTGCTGATAATCTTCTT+TGG | - | chr1_2:6296015-6296034 | Msa0052080:intron | 35.0% | |
| ATGGAAATCACTTCATGTAG+TGG | + | chr1_2:6296106-6296125 | None:intergenic | 35.0% | |
| ACATTAGTGAAAGTGAGTTC+AGG | - | chr1_2:6296140-6296159 | Msa0052080:intron | 35.0% | |
| CTACAGTCCTGAAAAAATGA+AGG | + | chr1_2:6296199-6296218 | None:intergenic | 35.0% | |
| !! | AAGACTGATGGACTTAAAAG+GGG | - | chr1_2:6296232-6296251 | Msa0052080:intron | 35.0% |
| !!! | GGTAAGACTCTTTTTTGATC+TGG | - | chr1_2:6296298-6296317 | Msa0052080:intron | 35.0% |
| AAGACATGGCAGATAAAGTA+AGG | + | chr1_2:6296363-6296382 | None:intergenic | 35.0% | |
| CTCAAAACTTCTATGACTCA+TGG | - | chr1_2:6296403-6296422 | Msa0052080:intron | 35.0% | |
| !! | AATTTTAGCAGGGGATTCAA+GGG | - | chr1_2:6296437-6296456 | Msa0052080:CDS | 35.0% |
| ! | CTTCGCTTTAGCTTACAAAA+TGG | - | chr1_2:6296645-6296664 | Msa0052080:intron | 35.0% |
| TGCAGAATTTCTATTGAACC+TGG | + | chr1_2:6296959-6296978 | None:intergenic | 35.0% | |
| TTTCAACTTCAGCCAAAAGA+CGG | + | chr1_2:6297084-6297103 | None:intergenic | 35.0% | |
| !!! | GTGCTTTTAATTTTTGGGCA+TGG | + | chr1_2:6297153-6297172 | None:intergenic | 35.0% |
| ACTGATGCGAATCAAGTAAA+CGG | + | chr1_2:6297220-6297239 | None:intergenic | 35.0% | |
| CTAAATTGAATACTGTTGCC+AGG | - | chr1_2:6297456-6297475 | Msa0052080:CDS | 35.0% | |
| GCAACAAAGGATAAAACAAG+AGG | - | chr1_2:6297486-6297505 | Msa0052080:CDS | 35.0% | |
| AACAAGAGGCAGAACAATTT+CGG | - | chr1_2:6297500-6297519 | Msa0052080:CDS | 35.0% | |
| TTTGGGCAAAAATTAGAAGC+TGG | - | chr1_2:6297727-6297746 | Msa0052080:intron | 35.0% | |
| GAAGTCAAGTTAATAGTGTG+TGG | + | chr1_2:6297789-6297808 | None:intergenic | 35.0% | |
| ! | AGAAGGTCAAAGAGCATATA+TGG | + | chr1_2:6297815-6297834 | None:intergenic | 35.0% |
| TCTAAATCAGCGTCAGAAAA+TGG | - | chr1_2:6297909-6297928 | Msa0052080:CDS | 35.0% | |
| !! | GGTGAGTATTCTAAAGTTGT+TGG | - | chr1_2:6297930-6297949 | Msa0052080:intron | 35.0% |
| ! | TTGTTCTCCATTTTCAGCAA+TGG | - | chr1_2:6298120-6298139 | Msa0052080:intron | 35.0% |
| AAAGCAACCATTGCTGAAAA+TGG | + | chr1_2:6298130-6298149 | None:intergenic | 35.0% | |
| GTATCTGATAATACTCTCAG+AGG | + | chr1_2:6298294-6298313 | None:intergenic | 35.0% | |
| GAATGGTTTAGAGAAACAAC+TGG | - | chr1_2:6298440-6298459 | Msa0052080:intron | 35.0% | |
| !!! | CTGGCGCCAATATTATTTTT+TGG | - | chr1_2:6298459-6298478 | Msa0052080:intron | 35.0% |
| ! | CAATTCCTTTAACTTCTTGG+TGG | + | chr1_2:6298574-6298593 | None:intergenic | 35.0% |
| ! | TTTTCAAAAGCTGAAGAGGT+AGG | + | chr1_2:6299232-6299251 | None:intergenic | 35.0% |
| CATTCTTGCATTTAGTGACA+TGG | + | chr1_2:6299346-6299365 | None:intergenic | 35.0% | |
| CATGTCACTAAATGCAAGAA+TGG | - | chr1_2:6299344-6299363 | Msa0052080:CDS | 35.0% | |
| ATCTAATTCACTTGTGGCAA+TGG | - | chr1_2:6299404-6299423 | Msa0052080:intron | 35.0% | |
| !! | TTTCTCCTGGTCTTTTTCTT+TGG | - | chr1_2:6299589-6299608 | Msa0052080:CDS | 35.0% |
| AAGTAGAGATATAGAGGGAA+AGG | - | chr1_2:6299781-6299800 | Msa0052080:intron | 35.0% | |
| TAAACTACAGGTGTCAAATG+TGG | - | chr1_2:6299864-6299883 | Msa0052080:intron | 35.0% | |
| AAACTACAGGTGTCAAATGT+GGG | - | chr1_2:6299865-6299884 | Msa0052080:intron | 35.0% | |
| TATCCCTAAGGGAAAAATAG+TGG | + | chr1_2:6300275-6300294 | None:intergenic | 35.0% | |
| ! | TTGGACATCTAAAATCTCAG+TGG | + | chr1_2:6300471-6300490 | None:intergenic | 35.0% |
| ACAATAATAAATCCGACCGA+AGG | + | chr1_2:6300551-6300570 | None:intergenic | 35.0% | |
| TTCATTGACAATTGCCCAAT+GGG | + | chr1_2:6300959-6300978 | None:intergenic | 35.0% | |
| TTTCATTGACAATTGCCCAA+TGG | + | chr1_2:6300960-6300979 | None:intergenic | 35.0% | |
| ATGAAAAAACTAGCAGTTGC+AGG | - | chr1_2:6300974-6300993 | Msa0052080:intron | 35.0% | |
| ATTGTATTAGCCACTGATGA+TGG | + | chr1_2:6301036-6301055 | None:intergenic | 35.0% | |
| TTTCTTACAACAGTGATCCT+AGG | - | chr1_2:6301217-6301236 | Msa0052080:intron | 35.0% | |
| !! | CTAACATTCTGACTTGTTTC+TGG | - | chr1_2:6301465-6301484 | Msa0052080:intron | 35.0% |
| AGTATATACCTCTATCAGTC+TGG | - | chr1_2:6301516-6301535 | Msa0052080:intron | 35.0% | |
| GTATATACCTCTATCAGTCT+GGG | - | chr1_2:6301517-6301536 | Msa0052080:intron | 35.0% | |
| !! | ACATGATTAGGAGAAGTGCT+TGG | - | chr1_2:6294384-6294403 | Msa0052080:three_prime_UTR | 40.0% |
| GATGTATATTGACCCATGGA+TGG | - | chr1_2:6294622-6294641 | Msa0052080:three_prime_UTR | 40.0% | |
| AAGTCTAAGAGACCATCCAT+GGG | + | chr1_2:6294637-6294656 | None:intergenic | 40.0% | |
| AAAGTCTAAGAGACCATCCA+TGG | + | chr1_2:6294638-6294657 | None:intergenic | 40.0% | |
| ! | AATGATTTGCAGGACTCACT+TGG | - | chr1_2:6295117-6295136 | Msa0052080:intron | 40.0% |
| GCAGAACTGTTATGATAGGT+TGG | - | chr1_2:6295148-6295167 | Msa0052080:intron | 40.0% | |
| ATTTGAGGGCCAATAATAGG+AGG | + | chr1_2:6295211-6295230 | None:intergenic | 40.0% | |
| TATTTCGGATATTGCGTGCA+CGG | + | chr1_2:6295364-6295383 | None:intergenic | 40.0% | |
| TGTGACCACTTACCTATTAC+AGG | + | chr1_2:6295667-6295686 | None:intergenic | 40.0% | |
| ! | GCCCAATTACATTTGAGGTT+AGG | + | chr1_2:6295761-6295780 | None:intergenic | 40.0% |
| TAGAGGCCCAATTACATTTG+AGG | + | chr1_2:6295766-6295785 | None:intergenic | 40.0% | |
| CTACATAGCCAGTGACAAAA+CGG | + | chr1_2:6295867-6295886 | None:intergenic | 40.0% | |
| GCCAAGAAATTCTTTCCTTG+AGG | + | chr1_2:6295892-6295911 | None:intergenic | 40.0% | |
| TGGTGCAGTACAAAGTGAAA+AGG | - | chr1_2:6295970-6295989 | Msa0052080:intron | 40.0% | |
| TGCTTCACTCATTGGATAGT+CGG | + | chr1_2:6296275-6296294 | None:intergenic | 40.0% | |
| CTATCCAATGAGTGAAGCAA+CGG | - | chr1_2:6296276-6296295 | Msa0052080:intron | 40.0% | |
| TATCCAATGAGTGAAGCAAC+GGG | - | chr1_2:6296277-6296296 | Msa0052080:intron | 40.0% | |
| CTTGAATCCCCTGCTAAAAT+TGG | + | chr1_2:6296438-6296457 | None:intergenic | 40.0% | |
| !! | CAATTTTAGCAGGGGATTCA+AGG | - | chr1_2:6296436-6296455 | Msa0052080:CDS | 40.0% |
| TTGAAGAAGTAGCGAAAGAG+TGG | - | chr1_2:6296463-6296482 | Msa0052080:CDS | 40.0% | |
| TGAAGAAGTAGCGAAAGAGT+GGG | - | chr1_2:6296464-6296483 | Msa0052080:CDS | 40.0% | |
| !! | CCATGGTGCGTTGATTTAAA+GGG | + | chr1_2:6296617-6296636 | None:intergenic | 40.0% |
| CCTTTAAATCAACGCACCAT+GGG | - | chr1_2:6296615-6296634 | Msa0052080:intron | 40.0% | |
| AAGCTTCATCTCAGACTGTA+TGG | + | chr1_2:6296856-6296875 | None:intergenic | 40.0% | |
| !! | CAGTCTGAGATGAAGCTTTT+TGG | - | chr1_2:6296858-6296877 | Msa0052080:intron | 40.0% |
| AAGGAAGATCATGGAACTTG+AGG | - | chr1_2:6296917-6296936 | Msa0052080:CDS | 40.0% | |
| ATCTTGCTGCATCACAAATG+AGG | + | chr1_2:6297056-6297075 | None:intergenic | 40.0% | |
| GAAGTTGAAAATCTTGCTGC+TGG | - | chr1_2:6297094-6297113 | Msa0052080:CDS | 40.0% | |
| GAAGAAGAAACAAGATAGCC+AGG | - | chr1_2:6297296-6297315 | Msa0052080:CDS | 40.0% | |
| !! | TTTGCTTTAGAAGCTGAACC+TGG | + | chr1_2:6297317-6297336 | None:intergenic | 40.0% |
| TCCTTTGTTGCAATTGTACC+TGG | + | chr1_2:6297477-6297496 | None:intergenic | 40.0% | |
| ! | AGGTCAAAGAGCATATATGG+CGG | + | chr1_2:6297812-6297831 | None:intergenic | 40.0% |
| GGGATTGAACTATATACCGT+TGG | - | chr1_2:6298028-6298047 | Msa0052080:intron | 40.0% | |
| GGTTCTTCAGAGAAAAACTG+AGG | - | chr1_2:6298536-6298555 | Msa0052080:intron | 40.0% | |
| AAAAACTGAGGAAGCTGCAA+TGG | - | chr1_2:6298548-6298567 | Msa0052080:CDS | 40.0% | |
| AATGGCCACCAAGAAGTTAA+AGG | - | chr1_2:6298566-6298585 | Msa0052080:CDS | 40.0% | |
| AAGTCATACCTGATGCATCT+CGG | + | chr1_2:6298620-6298639 | None:intergenic | 40.0% | |
| TTTAAATGCGTACCGGAAAG+TGG | - | chr1_2:6298696-6298715 | Msa0052080:intron | 40.0% | |
| AAAAGAGGGTTTCCACTTTC+CGG | + | chr1_2:6298711-6298730 | None:intergenic | 40.0% | |
| TAAATGCACTGAAACCCTCA+TGG | + | chr1_2:6298744-6298763 | None:intergenic | 40.0% | |
| GTAGTTACAATGAATGGGAG+TGG | - | chr1_2:6298801-6298820 | Msa0052080:intron | 40.0% | |
| GAATATGTGCTGCATACACT+TGG | + | chr1_2:6299015-6299034 | None:intergenic | 40.0% | |
| AACACTGTGTCACAATCTTC+AGG | - | chr1_2:6299077-6299096 | Msa0052080:CDS | 40.0% | |
| !! | GTAAATGAATTTGCTGCCAG+TGG | - | chr1_2:6299139-6299158 | Msa0052080:CDS | 40.0% |
| AATGGCTTCTCAACTATCTG+AGG | - | chr1_2:6299422-6299441 | Msa0052080:intron | 40.0% | |
| GATCAAATCAGGGAACTTGT+AGG | - | chr1_2:6299917-6299936 | Msa0052080:CDS | 40.0% | |
| TTGCAGTGATGTCTTCCAAA+AGG | - | chr1_2:6300095-6300114 | Msa0052080:intron | 40.0% | |
| ! | TAGGGCTATATCTGACCTTT+TGG | + | chr1_2:6300113-6300132 | None:intergenic | 40.0% |
| TTCGTAGTGACTATCTCCTT+CGG | - | chr1_2:6300532-6300551 | Msa0052080:CDS | 40.0% | |
| AGTTTCCCTGTTGAAGTCAA+GGG | + | chr1_2:6300705-6300724 | None:intergenic | 40.0% | |
| CATCAAGGAACCTTTATCTC+CGG | - | chr1_2:6300756-6300775 | Msa0052080:intron | 40.0% | |
| AAACAGCGCAAATATACACC+AGG | - | chr1_2:6300796-6300815 | Msa0052080:intron | 40.0% | |
| ! | TATACACCAGGCATTGCTAA+TGG | - | chr1_2:6300808-6300827 | Msa0052080:intron | 40.0% |
| AGCCATGGAAACTTTCTGAA+CGG | - | chr1_2:6301074-6301093 | Msa0052080:intron | 40.0% | |
| ATCCGTTCAGAAAGTTTCCA+TGG | + | chr1_2:6301079-6301098 | None:intergenic | 40.0% | |
| GAAATCTAAGCCACGACAAA+TGG | + | chr1_2:6301191-6301210 | None:intergenic | 40.0% | |
| TCTTTCTATGTCTTGTGCCT+AGG | + | chr1_2:6301237-6301256 | None:intergenic | 40.0% | |
| ATGGAAGATAGTTGCTTGCT+TGG | - | chr1_2:6301650-6301669 | Msa0052080:intron | 40.0% | |
| !! | TTCTCCTTCTAGTGTTGGTA+TGG | + | chr1_2:6301726-6301745 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTTCTAGTGT+TGG | + | chr1_2:6301731-6301750 | None:intergenic | 40.0% |
| CCAACACTAGAAGGAGAAAA+AGG | - | chr1_2:6301728-6301747 | Msa0052080:intron | 40.0% | |
| CAAGTCTTGAAAATGTGTCG+AGG | - | chr1_2:6301769-6301788 | Msa0052080:intron | 40.0% | |
| TCATTTACACACAAGCACAC+AGG | + | chr1_2:6301937-6301956 | None:intergenic | 40.0% | |
| !! | TTTGGTAATAGTGGGTGGTG+TGG | - | chr1_2:6294421-6294440 | Msa0052080:three_prime_UTR | 45.0% |
| CAATCTTGGAGTTGGAGGTA+AGG | + | chr1_2:6294544-6294563 | None:intergenic | 45.0% | |
| GTTGCAGTCAATCTTGGAGT+TGG | + | chr1_2:6294552-6294571 | None:intergenic | 45.0% | |
| GCAAAGGTTGCAGTCAATCT+TGG | + | chr1_2:6294558-6294577 | None:intergenic | 45.0% | |
| ! | CAGAGTGTTAAGGGTTTCCT+CGG | + | chr1_2:6295330-6295349 | None:intergenic | 45.0% |
| ATCGGATCTCTATTGACCTG+TGG | + | chr1_2:6295508-6295527 | None:intergenic | 45.0% | |
| !! | CGTTTTGTCACTGGCTATGT+AGG | - | chr1_2:6295865-6295884 | Msa0052080:intron | 45.0% |
| ! | TTGGCTTGAAGCAGCTAATG+AGG | - | chr1_2:6295907-6295926 | Msa0052080:intron | 45.0% |
| GAATATCGTAGTAGGTGCTC+TGG | - | chr1_2:6295950-6295969 | Msa0052080:intron | 45.0% | |
| TGAGTTCAGGATATGCTGCA+AGG | - | chr1_2:6296153-6296172 | Msa0052080:intron | 45.0% | |
| TTCACTCATTGGATAGTCGG+GGG | + | chr1_2:6296272-6296291 | None:intergenic | 45.0% | |
| CTTCACTCATTGGATAGTCG+GGG | + | chr1_2:6296273-6296292 | None:intergenic | 45.0% | |
| GCTTCACTCATTGGATAGTC+GGG | + | chr1_2:6296274-6296293 | None:intergenic | 45.0% | |
| TTACCCGTTGCTTCACTCAT+TGG | + | chr1_2:6296283-6296302 | None:intergenic | 45.0% | |
| TAAACGCTTGGAGCAGAAAG+AGG | - | chr1_2:6296536-6296555 | Msa0052080:CDS | 45.0% | |
| CCCTTTAAATCAACGCACCA+TGG | - | chr1_2:6296614-6296633 | Msa0052080:intron | 45.0% | |
| !! | CCCATGGTGCGTTGATTTAA+AGG | + | chr1_2:6296618-6296637 | None:intergenic | 45.0% |
| TTAAATCAACGCACCATGGG+TGG | - | chr1_2:6296618-6296637 | Msa0052080:intron | 45.0% | |
| AAAGCGAAGAATACCACCCA+TGG | + | chr1_2:6296634-6296653 | None:intergenic | 45.0% | |
| !! | AAGTGCTGCTTGAGTGTTTC+AGG | + | chr1_2:6296894-6296913 | None:intergenic | 45.0% |
| GAAACACTCAAGCAGCACTT+TGG | - | chr1_2:6296894-6296913 | Msa0052080:intron | 45.0% | |
| ! | GCACTTTGGAAGGAAGATCA+TGG | - | chr1_2:6296908-6296927 | Msa0052080:intron | 45.0% |
| ! | GCAAGATAGAGACCGTCTTT+TGG | - | chr1_2:6297069-6297088 | Msa0052080:CDS | 45.0% |
| !! | AATCTTGCTGCTGGTTCTGA+CGG | - | chr1_2:6297103-6297122 | Msa0052080:CDS | 45.0% |
| !! | ATTAAAAGCACTCGAAGCCC+AGG | - | chr1_2:6297162-6297181 | Msa0052080:intron | 45.0% |
| GCCAGGTACAATTGCAACAA+AGG | - | chr1_2:6297473-6297492 | Msa0052080:CDS | 45.0% | |
| AGAACAATTTCGGCAGTGGA+AGG | - | chr1_2:6297510-6297529 | Msa0052080:CDS | 45.0% | |
| GGCAAAAATTAGAAGCTGGC+CGG | - | chr1_2:6297731-6297750 | Msa0052080:intron | 45.0% | |
| GTCGTGATCAGTTATCACAC+CGG | + | chr1_2:6297753-6297772 | None:intergenic | 45.0% | |
| ! | GGTCAAAGAGCATATATGGC+GGG | + | chr1_2:6297811-6297830 | None:intergenic | 45.0% |
| TGGGAGTGGAACAACTAAAC+AGG | - | chr1_2:6298815-6298834 | Msa0052080:intron | 45.0% | |
| GCAATGAGAAGTCCTTGCAA+CGG | - | chr1_2:6298921-6298940 | Msa0052080:CDS | 45.0% | |
| TGATCACGAGCTAGAAGTCA+TGG | - | chr1_2:6298949-6298968 | Msa0052080:CDS | 45.0% | |
| ACTGTGTCACAATCTTCAGG+CGG | - | chr1_2:6299080-6299099 | Msa0052080:CDS | 45.0% | |
| !! | TTTTGGAGGACTAAGACCAC+TGG | + | chr1_2:6299158-6299177 | None:intergenic | 45.0% |
| ! | AGTGGTCTTAGTCCTCCAAA+AGG | - | chr1_2:6299157-6299176 | Msa0052080:CDS | 45.0% |
| ! | GTGGTCTTAGTCCTCCAAAA+GGG | - | chr1_2:6299158-6299177 | Msa0052080:CDS | 45.0% |
| AGTCCTCCAAAAGGGAAGAA+CGG | - | chr1_2:6299166-6299185 | Msa0052080:intron | 45.0% | |
| ! | AATCCGTTCTTCCCTTTTGG+AGG | + | chr1_2:6299172-6299191 | None:intergenic | 45.0% |
| ! | GCAAATCCGTTCTTCCCTTT+TGG | + | chr1_2:6299175-6299194 | None:intergenic | 45.0% |
| ! | AAGGGAAGAACGGATTTGCT+AGG | - | chr1_2:6299176-6299195 | Msa0052080:intron | 45.0% |
| CGTGTCCAAAGAAAAAGACC+AGG | + | chr1_2:6299597-6299616 | None:intergenic | 45.0% | |
| TCAAATGTGGGAGAAGGACA+TGG | - | chr1_2:6299877-6299896 | Msa0052080:intron | 45.0% | |
| GGGAACTTGTAGGTCTACTA+CGG | - | chr1_2:6299927-6299946 | Msa0052080:CDS | 45.0% | |
| CAAGAGGAAGGAAGTTGAGA+AGG | - | chr1_2:6299961-6299980 | Msa0052080:CDS | 45.0% | |
| GCTAGATGATGCAACCACAT+TGG | - | chr1_2:6300000-6300019 | Msa0052080:CDS | 45.0% | |
| AGACAGGATCTTACCGAAAC+TGG | + | chr1_2:6300031-6300050 | None:intergenic | 45.0% | |
| ! | TGATTATGGGTTGACTCTGC+TGG | + | chr1_2:6300208-6300227 | None:intergenic | 45.0% |
| TAGTGACTATCTCCTTCGGT+CGG | - | chr1_2:6300536-6300555 | Msa0052080:CDS | 45.0% | |
| AGTCTTCCCTTGACTTCAAC+AGG | - | chr1_2:6300696-6300715 | Msa0052080:intron | 45.0% | |
| GTCTTCCCTTGACTTCAACA+GGG | - | chr1_2:6300697-6300716 | Msa0052080:intron | 45.0% | |
| GAGTTTCCCTGTTGAAGTCA+AGG | + | chr1_2:6300706-6300725 | None:intergenic | 45.0% | |
| ACACTCTGTAGACGACATCA+AGG | - | chr1_2:6300741-6300760 | Msa0052080:intron | 45.0% | |
| ! | TATTTGCGCTGTTTCGATGC+TGG | + | chr1_2:6300790-6300809 | None:intergenic | 45.0% |
| CATTGCTAATGGCCAAGTGA+GGG | - | chr1_2:6300819-6300838 | Msa0052080:intron | 45.0% | |
| TTGATGCAGATGGTACCCAT+TGG | - | chr1_2:6300941-6300960 | Msa0052080:intron | 45.0% | |
| TGATGCAGATGGTACCCATT+GGG | - | chr1_2:6300942-6300961 | Msa0052080:intron | 45.0% | |
| ATGAGACGATGATGAGAGCA+AGG | - | chr1_2:6301110-6301129 | Msa0052080:CDS | 45.0% | |
| TGAGGCAAAGTATGTGAACG+TGG | + | chr1_2:6301136-6301155 | None:intergenic | 45.0% | |
| TTGAAAGCTTGTATGGCGCA+AGG | + | chr1_2:6301319-6301338 | None:intergenic | 45.0% | |
| ! | GTATTGACCCAGACTGATAG+AGG | + | chr1_2:6301527-6301546 | None:intergenic | 45.0% |
| GAAGATAGTTGCTTGCTTGG+AGG | - | chr1_2:6301653-6301672 | Msa0052080:intron | 45.0% | |
| CTGTCCATACCAACACTAGA+AGG | - | chr1_2:6301719-6301738 | Msa0052080:intron | 45.0% | |
| AGGAGAGGGGGAAAAAATAG+AGG | + | chr1_2:6301912-6301931 | None:intergenic | 45.0% | |
| !! | TTAAATATAAAAATAAACAA+GGG | + | chr1_2:6301285-6301304 | None:intergenic | 5.0% |
| !! | TTTAAATATAAAAATAAACA+AGG | + | chr1_2:6301286-6301305 | None:intergenic | 5.0% |
| AGTTGGAGGTAAGGTGGTAG+GGG | + | chr1_2:6294535-6294554 | None:intergenic | 50.0% | |
| GAGTTGGAGGTAAGGTGGTA+GGG | + | chr1_2:6294536-6294555 | None:intergenic | 50.0% | |
| TCTTGGAGTTGGAGGTAAGG+TGG | + | chr1_2:6294541-6294560 | None:intergenic | 50.0% | |
| GCAGTCAATCTTGGAGTTGG+AGG | + | chr1_2:6294549-6294568 | None:intergenic | 50.0% | |
| GATTTGCAGGACTCACTTGG+TGG | - | chr1_2:6295120-6295139 | Msa0052080:intron | 50.0% | |
| AATGTCAGCAGGACTTACGC+AGG | + | chr1_2:6295303-6295322 | None:intergenic | 50.0% | |
| TCCTGCTGACATTAATGCCG+AGG | - | chr1_2:6295310-6295329 | Msa0052080:CDS | 50.0% | |
| TCCTCGGCATTAATGTCAGC+AGG | + | chr1_2:6295314-6295333 | None:intergenic | 50.0% | |
| GCAGAACTTTGTGCTCGTTC+TGG | - | chr1_2:6295574-6295593 | Msa0052080:intron | 50.0% | |
| GAACTTTGTGCTCGTTCTGG+TGG | - | chr1_2:6295577-6295596 | Msa0052080:intron | 50.0% | |
| TGGCTCTTCCGATGAAGTTC+AGG | - | chr1_2:6295597-6295616 | Msa0052080:CDS | 50.0% | |
| ACTGGCTATGTAGGTCCTCA+AGG | - | chr1_2:6295874-6295893 | Msa0052080:intron | 50.0% | |
| CACTCAAGCAGCACTTTGGA+AGG | - | chr1_2:6296898-6296917 | Msa0052080:intron | 50.0% | |
| GGATGAGAAGAGAACTGTCC+AGG | - | chr1_2:6296938-6296957 | Msa0052080:CDS | 50.0% | |
| !! | ATCTTGCTGCTGGTTCTGAC+GGG | - | chr1_2:6297104-6297123 | Msa0052080:CDS | 50.0% |
| CGGGCAAACACACAAATCAG+AGG | - | chr1_2:6297123-6297142 | Msa0052080:intron | 50.0% | |
| AGGCAGAACAATTTCGGCAG+TGG | - | chr1_2:6297506-6297525 | Msa0052080:CDS | 50.0% | |
| CAGCAGCTCTTTCTCTCTAG+AGG | + | chr1_2:6297536-6297555 | None:intergenic | 50.0% | |
| TCTTCTAGCCGAGATGCATC+AGG | - | chr1_2:6298609-6298628 | Msa0052080:intron | 50.0% | |
| ATGAGAAGTCCTTGCAACGG+TGG | - | chr1_2:6298924-6298943 | Msa0052080:CDS | 50.0% | |
| TGAGAAGTCCTTGCAACGGT+GGG | - | chr1_2:6298925-6298944 | Msa0052080:CDS | 50.0% | |
| CTGTGTCACAATCTTCAGGC+GGG | - | chr1_2:6299081-6299100 | Msa0052080:CDS | 50.0% | |
| AAGCGAGCAGAAAGCAAGAG+AGG | + | chr1_2:6299301-6299320 | None:intergenic | 50.0% | |
| CTGAGGCAGAAGAACGAGAA+CGG | - | chr1_2:6299439-6299458 | Msa0052080:intron | 50.0% | |
| TGAGGCAGAAGAACGAGAAC+GGG | - | chr1_2:6299440-6299459 | Msa0052080:intron | 50.0% | |
| CCAGTGTCCACGATTAGTGA+AGG | + | chr1_2:6299466-6299485 | None:intergenic | 50.0% | |
| CCTTCACTAATCGTGGACAC+TGG | - | chr1_2:6299463-6299482 | Msa0052080:intron | 50.0% | |
| TGGAACCAGTTGCGCTCAAT+GGG | - | chr1_2:6299483-6299502 | Msa0052080:intron | 50.0% | |
| TCAACTCTCTTGCGGACACT+AGG | - | chr1_2:6299535-6299554 | Msa0052080:CDS | 50.0% | |
| CAGGTGTCAAATGTGGGAGA+AGG | - | chr1_2:6299871-6299890 | Msa0052080:intron | 50.0% | |
| TACGGCAAAGCGAGATCAAG+AGG | - | chr1_2:6299945-6299964 | Msa0052080:CDS | 50.0% | |
| GCAAAGCGAGATCAAGAGGA+AGG | - | chr1_2:6299949-6299968 | Msa0052080:CDS | 50.0% | |
| CACATTGGCCAAGCCAGTTT+CGG | - | chr1_2:6300015-6300034 | Msa0052080:CDS | 50.0% | |
| GGATCTTACCGAAACTGGCT+TGG | + | chr1_2:6300026-6300045 | None:intergenic | 50.0% | |
| TGCTGGTGCAAGACTGTATG+GGG | + | chr1_2:6300191-6300210 | None:intergenic | 50.0% | |
| CTGCTGGTGCAAGACTGTAT+GGG | + | chr1_2:6300192-6300211 | None:intergenic | 50.0% | |
| TCTGCTGGTGCAAGACTGTA+TGG | + | chr1_2:6300193-6300212 | None:intergenic | 50.0% | |
| ACTTGGCCATTAGCAATGCC+TGG | + | chr1_2:6300817-6300836 | None:intergenic | 50.0% | |
| GCATTGCTAATGGCCAAGTG+AGG | - | chr1_2:6300818-6300837 | Msa0052080:intron | 50.0% | |
| !! | ATGCTGCTGATTCCCTCACT+TGG | + | chr1_2:6300834-6300853 | None:intergenic | 50.0% |
| GACAAGCTTCTGGCAAGCTA+TGG | - | chr1_2:6300996-6301015 | Msa0052080:intron | 50.0% | |
| AAGCTTCTGGCAAGCTATGG+AGG | - | chr1_2:6300999-6301018 | Msa0052080:intron | 50.0% | |
| GCAAGCTATGGAGGTGGAAA+AGG | - | chr1_2:6301008-6301027 | Msa0052080:intron | 50.0% | |
| GGAAAAGGAGCCATCATCAG+TGG | - | chr1_2:6301023-6301042 | Msa0052080:intron | 50.0% | |
| AATGGAAGTGGCAGAAGCCA+TGG | - | chr1_2:6301059-6301078 | Msa0052080:intron | 50.0% | |
| !! | TCTGACTTGTTTCTGGCTGC+AGG | - | chr1_2:6301472-6301491 | Msa0052080:intron | 50.0% |
| !! | CTGACTTGTTTCTGGCTGCA+GGG | - | chr1_2:6301473-6301492 | Msa0052080:intron | 50.0% |
| TGGCTGCAGGGTGATGTAAA+TGG | - | chr1_2:6301485-6301504 | Msa0052080:intron | 50.0% | |
| ! | AGTTGCTTGCTTGGAGGCAT+TGG | - | chr1_2:6301659-6301678 | Msa0052080:intron | 50.0% |
| TACACACAAGCACACAGGCT+AGG | + | chr1_2:6301932-6301951 | None:intergenic | 50.0% | |
| GGAGTTGGAGGTAAGGTGGT+AGG | + | chr1_2:6294537-6294556 | None:intergenic | 55.0% | |
| GTGATCAACCCACCGTTGCA+AGG | + | chr1_2:6298936-6298955 | None:intergenic | 55.0% | |
| GAACGGGCCTTCACTAATCG+TGG | - | chr1_2:6299456-6299475 | Msa0052080:intron | 55.0% | |
| CTGGAACCAGTTGCGCTCAA+TGG | - | chr1_2:6299482-6299501 | Msa0052080:intron | 55.0% | |
| CTTCTCCCATTGAGCGCAAC+TGG | + | chr1_2:6299491-6299510 | None:intergenic | 55.0% | |
| !! | CGAAACTGGCTTGGCCAATG+TGG | + | chr1_2:6300017-6300036 | None:intergenic | 55.0% |
| GGCACAGGATCCGGAGATAA+AGG | + | chr1_2:6300769-6300788 | None:intergenic | 55.0% | |
| TTCGATGCTGGCACAGGATC+CGG | + | chr1_2:6300778-6300797 | None:intergenic | 55.0% | |
| GCAGTTGCAGGACAAGCTTC+TGG | - | chr1_2:6300986-6301005 | Msa0052080:intron | 55.0% | |
| CTTCTGGCAAGCTATGGAGG+TGG | - | chr1_2:6301002-6301021 | Msa0052080:intron | 55.0% | |
| GCGTGATCAGCCATTTGTCG+TGG | - | chr1_2:6301178-6301197 | Msa0052080:intron | 55.0% | |
| AAGCACACAGGCTAGGAGAG+GGG | + | chr1_2:6301925-6301944 | None:intergenic | 55.0% | |
| CAAGCACACAGGCTAGGAGA+GGG | + | chr1_2:6301926-6301945 | None:intergenic | 55.0% | |
| ACAAGCACACAGGCTAGGAG+AGG | + | chr1_2:6301927-6301946 | None:intergenic | 55.0% | |
| GAGGTAAGGTGGTAGGGGTG+GGG | + | chr1_2:6294530-6294549 | None:intergenic | 60.0% | |
| GGAGGTAAGGTGGTAGGGGT+GGG | + | chr1_2:6294531-6294550 | None:intergenic | 60.0% | |
| TGGAGGTAAGGTGGTAGGGG+TGG | + | chr1_2:6294532-6294551 | None:intergenic | 60.0% | |
| TACGCAGGCTGGGATAGAGC+AGG | + | chr1_2:6295288-6295307 | None:intergenic | 60.0% | |
| CAGCAGGACTTACGCAGGCT+GGG | + | chr1_2:6295298-6295317 | None:intergenic | 60.0% | |
| TCAGCAGGACTTACGCAGGC+TGG | + | chr1_2:6295299-6295318 | None:intergenic | 60.0% | |
| GGATAGTCGGGGGCTGTGAA+AGG | + | chr1_2:6296262-6296281 | None:intergenic | 60.0% | |
| !! | ATCTTCAGGCGGGCTGCACT+TGG | - | chr1_2:6299091-6299110 | Msa0052080:CDS | 60.0% |
| ! | CGCTGTTTCGATGCTGGCAC+AGG | + | chr1_2:6300784-6300803 | None:intergenic | 60.0% |
| AGCACACAGGCTAGGAGAGG+GGG | + | chr1_2:6301924-6301943 | None:intergenic | 60.0% | |
| !! | CAGGCGGGCTGCACTTGGAG+AGG | - | chr1_2:6299096-6299115 | Msa0052080:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6294377 | 6302092 | 6294377 | ID=Msa0052080;Name=Msa0052080 |
| chr1_2 | mRNA | 6294377 | 6302092 | 6294377 | ID=Msa0052080-mRNA-1;Parent=Msa0052080;Name=Msa0052080-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.85|0.80|0.95|0.95|0.95|21|708|738 |
| chr1_2 | exon | 6294377 | 6294975 | 6294377 | ID=Msa0052080-mRNA-1:exon:2055;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6295195 | 6295519 | 6295195 | ID=Msa0052080-mRNA-1:exon:2054;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6295596 | 6295751 | 6295596 | ID=Msa0052080-mRNA-1:exon:2053;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6296433 | 6296595 | 6296433 | ID=Msa0052080-mRNA-1:exon:2052;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6296913 | 6297134 | 6296913 | ID=Msa0052080-mRNA-1:exon:2051;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6297272 | 6297370 | 6297272 | ID=Msa0052080-mRNA-1:exon:2050;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6297452 | 6297549 | 6297452 | ID=Msa0052080-mRNA-1:exon:2049;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6297633 | 6297664 | 6297633 | ID=Msa0052080-mRNA-1:exon:2048;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6297839 | 6297932 | 6297839 | ID=Msa0052080-mRNA-1:exon:2047;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6298539 | 6298610 | 6298539 | ID=Msa0052080-mRNA-1:exon:2046;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6298911 | 6298991 | 6298911 | ID=Msa0052080-mRNA-1:exon:2045;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6299068 | 6299184 | 6299068 | ID=Msa0052080-mRNA-1:exon:2044;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6299286 | 6299399 | 6299286 | ID=Msa0052080-mRNA-1:exon:2043;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6299510 | 6299608 | 6299510 | ID=Msa0052080-mRNA-1:exon:2042;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6299912 | 6300078 | 6299912 | ID=Msa0052080-mRNA-1:exon:2041;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6300171 | 6300258 | 6300171 | ID=Msa0052080-mRNA-1:exon:2040;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6300469 | 6300582 | 6300469 | ID=Msa0052080-mRNA-1:exon:2039;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6300851 | 6300958 | 6300851 | ID=Msa0052080-mRNA-1:exon:2038;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6301078 | 6301169 | 6301078 | ID=Msa0052080-mRNA-1:exon:2037;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6301304 | 6301340 | 6301304 | ID=Msa0052080-mRNA-1:exon:2036;Parent=Msa0052080-mRNA-1 |
| chr1_2 | exon | 6302045 | 6302092 | 6302045 | ID=Msa0052080-mRNA-1:exon:2035;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6302045 | 6302092 | 6302045 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6301304 | 6301340 | 6301304 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6301078 | 6301169 | 6301078 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6300851 | 6300958 | 6300851 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6300469 | 6300582 | 6300469 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6300171 | 6300258 | 6300171 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6299912 | 6300078 | 6299912 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6299510 | 6299608 | 6299510 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6299286 | 6299399 | 6299286 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6299068 | 6299184 | 6299068 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6298911 | 6298991 | 6298911 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6298539 | 6298610 | 6298539 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6297839 | 6297932 | 6297839 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6297633 | 6297664 | 6297633 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6297452 | 6297549 | 6297452 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6297272 | 6297370 | 6297272 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6296913 | 6297134 | 6296913 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6296433 | 6296595 | 6296433 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6295596 | 6295751 | 6295596 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | CDS | 6295304 | 6295519 | 6295304 | ID=Msa0052080-mRNA-1:cds;Parent=Msa0052080-mRNA-1 |
| chr1_2 | three_prime_UTR | 6295195 | 6295303 | 6295195 | ID=Msa0052080-mRNA-1:three_prime_utr;Parent=Msa0052080-mRNA-1 |
| chr1_2 | three_prime_UTR | 6294377 | 6294975 | 6294377 | ID=Msa0052080-mRNA-1:three_prime_utr;Parent=Msa0052080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
