Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429250 | XP_013461079.1 | 72.653 | 245 | 29 | 3 | 2 | 208 | 15 | 259 | 9.84e-118 | 345 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429250 | sp|Q9FMX0|SODF3_ARATH | 59.155 | 213 | 49 | 3 | 31 | 205 | 45 | 257 | 5.24e-86 | 258 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429250 | A0A072V160 | 72.653 | 245 | 29 | 3 | 2 | 208 | 15 | 259 | 4.70e-118 | 345 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001950 | Msa1429250 | 0.814854 | 1.246364e-51 | -8.615850e-47 |
Msa0014920 | Msa1429250 | 0.804643 | 1.957914e-49 | -8.615850e-47 |
Msa0016670 | Msa1429250 | 0.810738 | 9.930184e-51 | -8.615850e-47 |
Msa0017510 | Msa1429250 | 0.820743 | 5.838029e-53 | -8.615850e-47 |
Msa0022640 | Msa1429250 | 0.807496 | 4.913943e-50 | -8.615850e-47 |
Msa0027540 | Msa1429250 | 0.819971 | 8.775781e-53 | -8.615850e-47 |
Msa0030430 | Msa1429250 | 0.817394 | 3.374447e-52 | -8.615850e-47 |
Msa0030730 | Msa1429250 | 0.828277 | 9.829063e-55 | -8.615850e-47 |
Msa0032120 | Msa1429250 | 0.841197 | 5.499375e-58 | -8.615850e-47 |
Msa0032400 | Msa1429250 | 0.822064 | 2.892257e-53 | -8.615850e-47 |
Msa0032840 | Msa1429250 | -0.821950 | 3.074694e-53 | -8.615850e-47 |
Msa0036430 | Msa1429250 | 0.800416 | 1.455864e-48 | -8.615850e-47 |
Msa0038350 | Msa1429250 | -0.841134 | 5.713542e-58 | -8.615850e-47 |
Msa0044020 | Msa1429250 | 0.809502 | 1.833085e-50 | -8.615850e-47 |
Msa0046750 | Msa1429250 | 0.805910 | 1.062357e-49 | -8.615850e-47 |
Msa0048020 | Msa1429250 | 0.811153 | 8.073523e-51 | -8.615850e-47 |
Msa0050580 | Msa1429250 | 0.804998 | 1.650117e-49 | -8.615850e-47 |
Msa0050940 | Msa1429250 | 0.810243 | 1.270019e-50 | -8.615850e-47 |
Msa0052080 | Msa1429250 | 0.808548 | 2.934778e-50 | -8.615850e-47 |
Msa0053110 | Msa1429250 | 0.805770 | 1.137279e-49 | -8.615850e-47 |
Msa0054640 | Msa1429250 | 0.805466 | 1.317097e-49 | -8.615850e-47 |
Msa0063580 | Msa1429250 | 0.833548 | 5.007495e-56 | -8.615850e-47 |
Msa0075310 | Msa1429250 | 0.817071 | 3.988245e-52 | -8.615850e-47 |
Msa0090590 | Msa1429250 | 0.803639 | 3.167398e-49 | -8.615850e-47 |
Msa0091770 | Msa1429250 | 0.826504 | 2.616390e-54 | -8.615850e-47 |
Msa0094100 | Msa1429250 | 0.816585 | 5.126541e-52 | -8.615850e-47 |
Msa0101320 | Msa1429250 | -0.808278 | 3.349772e-50 | -8.615850e-47 |
Msa0101810 | Msa1429250 | -0.812464 | 4.184530e-51 | -8.615850e-47 |
Msa0103000 | Msa1429250 | 0.827244 | 1.741413e-54 | -8.615850e-47 |
Msa0105420 | Msa1429250 | 0.811527 | 6.695029e-51 | -8.615850e-47 |
Msa0106790 | Msa1429250 | 0.810149 | 1.330672e-50 | -8.615850e-47 |
Msa0110970 | Msa1429250 | 0.826238 | 3.027183e-54 | -8.615850e-47 |
Msa0114540 | Msa1429250 | -0.807472 | 4.971844e-50 | -8.615850e-47 |
Msa0118400 | Msa1429250 | 0.810157 | 1.325142e-50 | -8.615850e-47 |
Msa0120330 | Msa1429250 | 0.810670 | 1.026822e-50 | -8.615850e-47 |
Msa1346370 | Msa1429250 | 0.804298 | 2.310144e-49 | -8.615850e-47 |
Msa1362510 | Msa1429250 | 0.805719 | 1.165599e-49 | -8.615850e-47 |
Msa1367080 | Msa1429250 | 0.819807 | 9.564120e-53 | -8.615850e-47 |
Msa1379990 | Msa1429250 | 0.829503 | 4.963096e-55 | -8.615850e-47 |
Msa1382310 | Msa1429250 | 0.832854 | 7.454139e-56 | -8.615850e-47 |
Msa1385620 | Msa1429250 | 0.837666 | 4.543449e-57 | -8.615850e-47 |
Msa1385900 | Msa1429250 | 0.813836 | 2.092493e-51 | -8.615850e-47 |
Msa1390310 | Msa1429250 | 0.815888 | 7.338014e-52 | -8.615850e-47 |
Msa1395230 | Msa1429250 | -0.810279 | 1.247416e-50 | -8.615850e-47 |
Msa1398480 | Msa1429250 | 0.844789 | 6.083105e-59 | -8.615850e-47 |
Msa1410430 | Msa1429250 | -0.800507 | 1.395123e-48 | -8.615850e-47 |
Msa1417870 | Msa1429250 | 0.807697 | 4.453868e-50 | -8.615850e-47 |
Msa1420060 | Msa1429250 | 0.820497 | 6.646883e-53 | -8.615850e-47 |
Msa1425250 | Msa1429250 | 0.800092 | 1.694782e-48 | -8.615850e-47 |
Msa1427760 | Msa1429250 | 0.809751 | 1.620929e-50 | -8.615850e-47 |
Msa1429250 | Msa1429360 | -0.842168 | 3.048455e-58 | -8.615850e-47 |
Msa1429250 | Msa1431000 | 0.803786 | 2.952204e-49 | -8.615850e-47 |
Msa1429250 | Msa1443290 | -0.800059 | 1.721321e-48 | -8.615850e-47 |
Msa1429250 | Msa1447230 | 0.809865 | 1.531446e-50 | -8.615850e-47 |
Msa1429250 | Msa1449880 | 0.802677 | 5.007450e-49 | -8.615850e-47 |
Msa1429250 | Msa1464560 | 0.804688 | 1.915961e-49 | -8.615850e-47 |
Msa0604360 | Msa1429250 | 0.802958 | 4.381367e-49 | -8.615850e-47 |
Msa0607200 | Msa1429250 | 0.823137 | 1.628713e-53 | -8.615850e-47 |
Msa0621120 | Msa1429250 | 0.832740 | 7.953427e-56 | -8.615850e-47 |
Msa0621890 | Msa1429250 | 0.802325 | 5.918960e-49 | -8.615850e-47 |
Msa0625530 | Msa1429250 | -0.811366 | 7.256388e-51 | -8.615850e-47 |
Msa0629290 | Msa1429250 | 0.803522 | 3.349170e-49 | -8.615850e-47 |
Msa0629370 | Msa1429250 | 0.800894 | 1.163335e-48 | -8.615850e-47 |
Msa0631120 | Msa1429250 | 0.817432 | 3.307462e-52 | -8.615850e-47 |
Msa0638320 | Msa1429250 | 0.800995 | 1.109197e-48 | -8.615850e-47 |
Msa0669850 | Msa1429250 | 0.805951 | 1.041795e-49 | -8.615850e-47 |
Msa0677820 | Msa1429250 | 0.843472 | 1.372516e-58 | -8.615850e-47 |
Msa0681890 | Msa1429250 | 0.807891 | 4.049956e-50 | -8.615850e-47 |
Msa0716450 | Msa1429250 | 0.817994 | 2.469836e-52 | -8.615850e-47 |
Msa0717260 | Msa1429250 | 0.802196 | 6.292276e-49 | -8.615850e-47 |
Msa0730180 | Msa1429250 | 0.804845 | 1.776468e-49 | -8.615850e-47 |
Msa0741900 | Msa1429250 | 0.805945 | 1.044856e-49 | -8.615850e-47 |
Msa0746600 | Msa1429250 | 0.829892 | 3.992602e-55 | -8.615850e-47 |
Msa0748930 | Msa1429250 | 0.800390 | 1.473996e-48 | -8.615850e-47 |
Msa0756630 | Msa1429250 | -0.815601 | 8.503839e-52 | -8.615850e-47 |
Msa0761580 | Msa1429250 | 0.803300 | 3.722823e-49 | -8.615850e-47 |
Msa0789570 | Msa1429250 | 0.820563 | 6.419045e-53 | -8.615850e-47 |
Msa0813320 | Msa1429250 | -0.807787 | 4.260815e-50 | -8.615850e-47 |
Msa0822990 | Msa1429250 | 0.823250 | 1.532134e-53 | -8.615850e-47 |
Msa0837980 | Msa1429250 | 0.800242 | 1.579675e-48 | -8.615850e-47 |
Msa0842230 | Msa1429250 | 0.830014 | 3.726349e-55 | -8.615850e-47 |
Msa0130570 | Msa1429250 | 0.807648 | 4.562245e-50 | -8.615850e-47 |
Msa0140570 | Msa1429250 | 0.815622 | 8.414090e-52 | -8.615850e-47 |
Msa0141430 | Msa1429250 | 0.810682 | 1.020776e-50 | -8.615850e-47 |
Msa0141830 | Msa1429250 | 0.818351 | 2.050653e-52 | -8.615850e-47 |
Msa0143080 | Msa1429250 | 0.807616 | 4.632751e-50 | -8.615850e-47 |
Msa0143430 | Msa1429250 | 0.802795 | 4.734516e-49 | -8.615850e-47 |
Msa0145670 | Msa1429250 | 0.829834 | 4.123347e-55 | -8.615850e-47 |
Msa0147560 | Msa1429250 | 0.821511 | 3.883590e-53 | -8.615850e-47 |
Msa0156650 | Msa1429250 | -0.807570 | 4.739575e-50 | -8.615850e-47 |
Msa0157290 | Msa1429250 | 0.820572 | 6.388830e-53 | -8.615850e-47 |
Msa0161680 | Msa1429250 | 0.812128 | 4.954277e-51 | -8.615850e-47 |
Msa0168100 | Msa1429250 | 0.822036 | 2.936333e-53 | -8.615850e-47 |
Msa0172350 | Msa1429250 | 0.821611 | 3.682913e-53 | -8.615850e-47 |
Msa0172960 | Msa1429250 | -0.813325 | 2.710823e-51 | -8.615850e-47 |
Msa0183610 | Msa1429250 | 0.816414 | 5.599215e-52 | -8.615850e-47 |
Msa0183620 | Msa1429250 | 0.830490 | 2.852311e-55 | -8.615850e-47 |
Msa0185700 | Msa1429250 | 0.836109 | 1.134261e-56 | -8.615850e-47 |
Msa0187070 | Msa1429250 | 0.801336 | 9.445896e-49 | -8.615850e-47 |
Msa0188680 | Msa1429250 | -0.800149 | 1.650159e-48 | -8.615850e-47 |
Msa0203030 | Msa1429250 | 0.839939 | 1.174029e-57 | -8.615850e-47 |
Msa0203640 | Msa1429250 | 0.805521 | 1.282485e-49 | -8.615850e-47 |
Msa0207000 | Msa1429250 | 0.822165 | 2.741192e-53 | -8.615850e-47 |
Msa0208630 | Msa1429250 | 0.800083 | 1.701690e-48 | -8.615850e-47 |
Msa0215320 | Msa1429250 | -0.804653 | 1.948242e-49 | -8.615850e-47 |
Msa0219190 | Msa1429250 | 0.818147 | 2.280999e-52 | -8.615850e-47 |
Msa0230550 | Msa1429250 | -0.821257 | 4.446111e-53 | -8.615850e-47 |
Msa0235890 | Msa1429250 | 0.800260 | 1.566656e-48 | -8.615850e-47 |
Msa1226620 | Msa1429250 | 0.802294 | 6.005501e-49 | -8.615850e-47 |
Msa1243170 | Msa1429250 | 0.811816 | 5.794788e-51 | -8.615850e-47 |
Msa1264020 | Msa1429250 | 0.834400 | 3.063465e-56 | -8.615850e-47 |
Msa1265960 | Msa1429250 | 0.815745 | 7.898150e-52 | -8.615850e-47 |
Msa1269580 | Msa1429250 | -0.839339 | 1.681060e-57 | -8.615850e-47 |
Msa1280120 | Msa1429250 | 0.827734 | 1.328196e-54 | -8.615850e-47 |
Msa1280130 | Msa1429250 | 0.817627 | 2.988997e-52 | -8.615850e-47 |
Msa1284520 | Msa1429250 | 0.844212 | 8.696238e-59 | -8.615850e-47 |
Msa1309240 | Msa1429250 | 0.840195 | 1.006544e-57 | -8.615850e-47 |
Msa1310110 | Msa1429250 | 0.800213 | 1.601894e-48 | -8.615850e-47 |
Msa1321000 | Msa1429250 | 0.800587 | 1.343850e-48 | -8.615850e-47 |
Msa1323190 | Msa1429250 | 0.820510 | 6.604339e-53 | -8.615850e-47 |
Msa1324000 | Msa1429250 | 0.831876 | 1.301809e-55 | -8.615850e-47 |
Msa1335860 | Msa1429250 | 0.817121 | 3.885885e-52 | -8.615850e-47 |
Msa0369570 | Msa1429250 | 0.800324 | 1.520109e-48 | -8.615850e-47 |
Msa0374850 | Msa1429250 | 0.802271 | 6.071420e-49 | -8.615850e-47 |
Msa0376510 | Msa1429250 | 0.829010 | 6.537998e-55 | -8.615850e-47 |
Msa0378080 | Msa1429250 | 0.841363 | 4.972759e-58 | -8.615850e-47 |
Msa0378500 | Msa1429250 | 0.802401 | 5.709988e-49 | -8.615850e-47 |
Msa0380310 | Msa1429250 | 0.801636 | 8.201294e-49 | -8.615850e-47 |
Msa0413720 | Msa1429250 | 0.813947 | 1.977713e-51 | -8.615850e-47 |
Msa0414950 | Msa1429250 | -0.809230 | 2.096547e-50 | -8.615850e-47 |
Msa0419820 | Msa1429250 | 0.899566 | 1.746273e-77 | -8.615850e-47 |
Msa0422830 | Msa1429250 | 0.801934 | 7.124301e-49 | -8.615850e-47 |
Msa0422910 | Msa1429250 | 0.802441 | 5.601873e-49 | -8.615850e-47 |
Msa0423360 | Msa1429250 | -0.822309 | 2.537822e-53 | -8.615850e-47 |
Msa0425050 | Msa1429250 | 0.826289 | 2.943829e-54 | -8.615850e-47 |
Msa0425940 | Msa1429250 | 0.826993 | 1.999149e-54 | -8.615850e-47 |
Msa0426020 | Msa1429250 | 0.828637 | 8.047224e-55 | -8.615850e-47 |
Msa0426160 | Msa1429250 | 0.825776 | 3.898048e-54 | -8.615850e-47 |
Msa0431430 | Msa1429250 | 0.817278 | 3.582151e-52 | -8.615850e-47 |
Msa0436280 | Msa1429250 | -0.840550 | 8.127462e-58 | -8.615850e-47 |
Msa0436460 | Msa1429250 | 0.832165 | 1.104708e-55 | -8.615850e-47 |
Msa0436500 | Msa1429250 | 0.805463 | 1.318639e-49 | -8.615850e-47 |
Msa0437710 | Msa1429250 | 0.831541 | 1.574207e-55 | -8.615850e-47 |
Msa0443500 | Msa1429250 | 0.813359 | 2.663824e-51 | -8.615850e-47 |
Msa0450050 | Msa1429250 | 0.812581 | 3.944548e-51 | -8.615850e-47 |
Msa0459770 | Msa1429250 | -0.823435 | 1.387281e-53 | -8.615850e-47 |
Msa0470180 | Msa1429250 | 0.835786 | 1.370033e-56 | -8.615850e-47 |
Msa0480320 | Msa1429250 | 0.819136 | 1.360714e-52 | -8.615850e-47 |
Msa0480980 | Msa1429250 | 0.823366 | 1.440009e-53 | -8.615850e-47 |
Msa0980440 | Msa1429250 | 0.803688 | 3.093591e-49 | -8.615850e-47 |
Msa0981000 | Msa1429250 | 0.833138 | 6.335701e-56 | -8.615850e-47 |
Msa0981820 | Msa1429250 | -0.807458 | 5.006380e-50 | -8.615850e-47 |
Msa0996080 | Msa1429250 | 0.812942 | 3.288901e-51 | -8.615850e-47 |
Msa1007610 | Msa1429250 | -0.834525 | 2.850602e-56 | -8.615850e-47 |
Msa1008490 | Msa1429250 | 0.813154 | 2.954173e-51 | -8.615850e-47 |
Msa1014270 | Msa1429250 | 0.806035 | 1.000224e-49 | -8.615850e-47 |
Msa1018790 | Msa1429250 | 0.802689 | 4.980738e-49 | -8.615850e-47 |
Msa1033560 | Msa1429250 | 0.802049 | 6.746788e-49 | -8.615850e-47 |
Msa1038050 | Msa1429250 | 0.809720 | 1.645953e-50 | -8.615850e-47 |
Msa1040120 | Msa1429250 | 0.808084 | 3.685177e-50 | -8.615850e-47 |
Msa1041530 | Msa1429250 | 0.803112 | 4.072957e-49 | -8.615850e-47 |
Msa1044340 | Msa1429250 | 0.805086 | 1.581749e-49 | -8.615850e-47 |
Msa1055260 | Msa1429250 | 0.806281 | 8.879083e-50 | -8.615850e-47 |
Msa1055280 | Msa1429250 | 0.810713 | 1.005115e-50 | -8.615850e-47 |
Msa1055690 | Msa1429250 | 0.818646 | 1.758178e-52 | -8.615850e-47 |
Msa1069100 | Msa1429250 | 0.801003 | 1.104995e-48 | -8.615850e-47 |
Msa1073840 | Msa1429250 | 0.807637 | 4.586710e-50 | -8.615850e-47 |
Msa1082700 | Msa1429250 | 0.809265 | 2.060856e-50 | -8.615850e-47 |
Msa1097640 | Msa1429250 | 0.800784 | 1.224969e-48 | -8.615850e-47 |
Msa1106560 | Msa1429250 | 0.802726 | 4.892928e-49 | -8.615850e-47 |
Msa0239660 | Msa1429250 | 0.809410 | 1.918860e-50 | -8.615850e-47 |
Msa0244270 | Msa1429250 | 0.804619 | 1.980784e-49 | -8.615850e-47 |
Msa0246690 | Msa1429250 | 0.824216 | 9.102051e-54 | -8.615850e-47 |
Msa0257680 | Msa1429250 | 0.808291 | 3.329516e-50 | -8.615850e-47 |
Msa0264350 | Msa1429250 | 0.800413 | 1.458053e-48 | -8.615850e-47 |
Msa0265820 | Msa1429250 | 0.817529 | 3.145908e-52 | -8.615850e-47 |
Msa0267760 | Msa1429250 | 0.829354 | 5.396652e-55 | -8.615850e-47 |
Msa0272480 | Msa1429250 | -0.813398 | 2.611966e-51 | -8.615850e-47 |
Msa0280900 | Msa1429250 | 0.814907 | 1.213201e-51 | -8.615850e-47 |
Msa0289890 | Msa1429250 | 0.812079 | 5.078387e-51 | -8.615850e-47 |
Msa0294560 | Msa1429250 | -0.803161 | 3.977881e-49 | -8.615850e-47 |
Msa0296760 | Msa1429250 | 0.802351 | 5.846815e-49 | -8.615850e-47 |
Msa0298940 | Msa1429250 | 0.816198 | 6.258606e-52 | -8.615850e-47 |
Msa0298970 | Msa1429250 | 0.811714 | 6.097157e-51 | -8.615850e-47 |
Msa0306300 | Msa1429250 | 0.818009 | 2.451125e-52 | -8.615850e-47 |
Msa0308830 | Msa1429250 | 0.811821 | 5.779070e-51 | -8.615850e-47 |
Msa0312690 | Msa1429250 | -0.810842 | 9.427015e-51 | -8.615850e-47 |
Msa0320100 | Msa1429250 | 0.816106 | 6.561060e-52 | -8.615850e-47 |
Msa0335270 | Msa1429250 | 0.814220 | 1.721228e-51 | -8.615850e-47 |
Msa0342200 | Msa1429250 | 0.820100 | 8.199784e-53 | -8.615850e-47 |
Msa0358170 | Msa1429250 | 0.804366 | 2.236404e-49 | -8.615850e-47 |
Msa1111630 | Msa1429250 | 0.803542 | 3.316371e-49 | -8.615850e-47 |
Msa1124680 | Msa1429250 | -0.807300 | 5.405681e-50 | -8.615850e-47 |
Msa1129560 | Msa1429250 | 0.816853 | 4.462887e-52 | -8.615850e-47 |
Msa1139810 | Msa1429250 | 0.821731 | 3.454015e-53 | -8.615850e-47 |
Msa1159100 | Msa1429250 | 0.827200 | 1.784257e-54 | -8.615850e-47 |
Msa1160400 | Msa1429250 | 0.810981 | 8.795256e-51 | -8.615850e-47 |
Msa1171690 | Msa1429250 | 0.841188 | 5.527265e-58 | -8.615850e-47 |
Msa1184730 | Msa1429250 | 0.806785 | 6.950447e-50 | -8.615850e-47 |
Msa1188940 | Msa1429250 | 0.840617 | 7.804559e-58 | -8.615850e-47 |
Msa1217860 | Msa1429250 | 0.805570 | 1.252277e-49 | -8.615850e-47 |
Msa1221560 | Msa1429250 | 0.800550 | 1.367411e-48 | -8.615850e-47 |
Msa1222970 | Msa1429250 | 0.824607 | 7.366739e-54 | -8.615850e-47 |
Msa1223460 | Msa1429250 | 0.817147 | 3.834418e-52 | -8.615850e-47 |
Msa0503580 | Msa1429250 | 0.801401 | 9.164178e-49 | -8.615850e-47 |
Msa0505370 | Msa1429250 | 0.812528 | 4.051051e-51 | -8.615850e-47 |
Msa0509970 | Msa1429250 | 0.836729 | 7.888059e-57 | -8.615850e-47 |
Msa0516450 | Msa1429250 | 0.816832 | 4.511878e-52 | -8.615850e-47 |
Msa0518040 | Msa1429250 | 0.830576 | 2.716917e-55 | -8.615850e-47 |
Msa0521880 | Msa1429250 | 0.802190 | 6.309300e-49 | -8.615850e-47 |
Msa0524120 | Msa1429250 | 0.813108 | 3.024207e-51 | -8.615850e-47 |
Msa0526640 | Msa1429250 | -0.846727 | 1.810566e-59 | -8.615850e-47 |
Msa0526710 | Msa1429250 | 0.825717 | 4.026300e-54 | -8.615850e-47 |
Msa0527590 | Msa1429250 | 0.800426 | 1.449480e-48 | -8.615850e-47 |
Msa0527600 | Msa1429250 | 0.822817 | 1.933931e-53 | -8.615850e-47 |
Msa0532300 | Msa1429250 | 0.810903 | 9.142574e-51 | -8.615850e-47 |
Msa0532330 | Msa1429250 | 0.802865 | 4.581014e-49 | -8.615850e-47 |
Msa0534590 | Msa1429250 | 0.804554 | 2.042926e-49 | -8.615850e-47 |
Msa0535030 | Msa1429250 | 0.819294 | 1.252734e-52 | -8.615850e-47 |
Msa0535060 | Msa1429250 | 0.825522 | 4.478403e-54 | -8.615850e-47 |
Msa0546380 | Msa1429250 | 0.844305 | 8.207622e-59 | -8.615850e-47 |
Msa0546840 | Msa1429250 | 0.828931 | 6.832620e-55 | -8.615850e-47 |
Msa0547140 | Msa1429250 | 0.803778 | 2.962841e-49 | -8.615850e-47 |
Msa0563530 | Msa1429250 | 0.813513 | 2.464688e-51 | -8.615850e-47 |
Msa0577940 | Msa1429250 | -0.812615 | 3.878764e-51 | -8.615850e-47 |
Msa0579290 | Msa1429250 | 0.805185 | 1.508440e-49 | -8.615850e-47 |
Msa0579390 | Msa1429250 | 0.808133 | 3.598002e-50 | -8.615850e-47 |
Msa0581760 | Msa1429250 | 0.831489 | 1.621448e-55 | -8.615850e-47 |
Msa0589150 | Msa1429250 | 0.808948 | 2.409536e-50 | -8.615850e-47 |
Msa0590680 | Msa1429250 | 0.808989 | 2.361872e-50 | -8.615850e-47 |
Msa0591770 | Msa1429250 | 0.817768 | 2.779087e-52 | -8.615850e-47 |
Msa0844560 | Msa1429250 | 0.822343 | 2.492139e-53 | -8.615850e-47 |
Msa0854570 | Msa1429250 | 0.831508 | 1.604481e-55 | -8.615850e-47 |
Msa0862100 | Msa1429250 | 0.808075 | 3.700787e-50 | -8.615850e-47 |
Msa0867050 | Msa1429250 | -0.802853 | 4.605784e-49 | -8.615850e-47 |
Msa0873190 | Msa1429250 | 0.800129 | 1.665883e-48 | -8.615850e-47 |
Msa0880140 | Msa1429250 | 0.819607 | 1.062800e-52 | -8.615850e-47 |
Msa0883030 | Msa1429250 | 0.811834 | 5.740812e-51 | -8.615850e-47 |
Msa0890250 | Msa1429250 | 0.830485 | 2.859624e-55 | -8.615850e-47 |
Msa0909710 | Msa1429250 | 0.801226 | 9.950637e-49 | -8.615850e-47 |
Msa0925160 | Msa1429250 | 0.820154 | 7.969333e-53 | -8.615850e-47 |
Msa0936270 | Msa1429250 | 0.809126 | 2.207474e-50 | -8.615850e-47 |
Msa0937940 | Msa1429250 | 0.828003 | 1.144773e-54 | -8.615850e-47 |
Msa0941730 | Msa1429250 | 0.821584 | 3.735495e-53 | -8.615850e-47 |
Msa0941750 | Msa1429250 | 0.804787 | 1.827042e-49 | -8.615850e-47 |
Msa0952950 | Msa1429250 | 0.808428 | 3.111744e-50 | -8.615850e-47 |
Msa0955260 | Msa1429250 | 0.817287 | 3.565582e-52 | -8.615850e-47 |
Msa0969400 | Msa1429250 | 0.812950 | 3.276097e-51 | -8.615850e-47 |
Msa0969570 | Msa1429250 | 0.802163 | 6.392126e-49 | -8.615850e-47 |
Msa0969700 | Msa1429250 | 0.825740 | 3.975625e-54 | -8.615850e-47 |
Msa0971800 | Msa1429250 | 0.809159 | 2.171814e-50 | -8.615850e-47 |
Msa0975580 | Msa1429250 | 0.802791 | 4.743569e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429250 | MtrunA17_Chr3g0118421 | 72.653 | 245 | 29 | 3 | 2 | 208 | 15 | 259 | 9.05e-122 | 345 |
Msa1429250 | MtrunA17_Chr1g0170691 | 41.057 | 246 | 89 | 4 | 12 | 201 | 30 | 275 | 1.26e-48 | 161 |
Msa1429250 | MtrunA17_Chr3g0128941 | 26.457 | 223 | 115 | 7 | 13 | 192 | 13 | 229 | 5.73e-19 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429250 | AT5G23310.1 | 59.155 | 213 | 49 | 3 | 31 | 205 | 45 | 257 | 5.33e-87 | 258 |
Msa1429250 | AT5G51100.1 | 42.544 | 228 | 78 | 4 | 20 | 194 | 36 | 263 | 7.07e-57 | 182 |
Msa1429250 | AT5G51100.5 | 43.379 | 219 | 80 | 5 | 20 | 194 | 36 | 254 | 2.70e-55 | 178 |
Msa1429250 | AT4G25100.3 | 44.019 | 209 | 82 | 2 | 26 | 199 | 1 | 209 | 3.65e-51 | 165 |
Msa1429250 | AT4G25100.5 | 44.019 | 209 | 82 | 2 | 26 | 199 | 1 | 209 | 3.65e-51 | 165 |
Msa1429250 | AT4G25100.1 | 44.019 | 209 | 82 | 2 | 26 | 199 | 1 | 209 | 3.65e-51 | 165 |
Msa1429250 | AT4G25100.2 | 44.019 | 209 | 82 | 2 | 26 | 199 | 1 | 209 | 3.65e-51 | 165 |
Msa1429250 | AT5G51100.2 | 41.538 | 195 | 62 | 3 | 52 | 194 | 1 | 195 | 8.56e-47 | 154 |
Msa1429250 | AT5G51100.6 | 41.538 | 195 | 62 | 3 | 52 | 194 | 1 | 195 | 8.56e-47 | 154 |
Msa1429250 | AT5G51100.4 | 49.660 | 147 | 54 | 2 | 20 | 146 | 36 | 182 | 1.65e-44 | 148 |
Msa1429250 | AT5G51100.3 | 49.660 | 147 | 54 | 2 | 20 | 146 | 36 | 182 | 1.65e-44 | 148 |
Msa1429250 | AT4G25100.4 | 42.077 | 183 | 71 | 2 | 52 | 199 | 1 | 183 | 1.79e-40 | 137 |
Msa1429250 | AT3G10920.1 | 30.045 | 223 | 108 | 9 | 15 | 192 | 5 | 224 | 1.58e-22 | 91.7 |
Msa1429250 | AT3G10920.2 | 29.596 | 223 | 108 | 10 | 15 | 192 | 5 | 223 | 3.35e-20 | 85.5 |
Msa1429250 | AT3G56350.1 | 31.429 | 175 | 80 | 5 | 42 | 177 | 42 | 215 | 7.03e-20 | 85.1 |
Find 83 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGATCCACTCCTTCCTTTC+TGG | 0.052374 | tig0026478:-2789 | None:intergenic |
CAACAGATTGAAAAGGATTT+TGG | 0.090800 | tig0026478:+1619 | Msa1429250:CDS |
GCGTCCCATGTGCTTCTTTC+TGG | 0.097898 | tig0026478:+2837 | Msa1429250:three_prime_UTR |
CTCCGTGCAGCAAATCAATT+TGG | 0.210001 | tig0026478:+2300 | Msa1429250:CDS |
TTTGGAATCATGACTTCTTC+TGG | 0.232976 | tig0026478:+1548 | Msa1429250:CDS |
TATGAACAAGGCATCTTAAA+TGG | 0.246552 | tig0026478:+2712 | Msa1429250:three_prime_UTR |
GGGATGTAGTGAACTTAGTA+TGG | 0.265185 | tig0026478:+2912 | Msa1429250:three_prime_UTR |
ATCATTGAGTTTCAAATAAT+AGG | 0.287785 | tig0026478:-3153 | None:intergenic |
GCACTTACATTGTTTGGTTC+TGG | 0.289790 | tig0026478:+1679 | Msa1429250:CDS |
GAAGCTGCACTTACATTGTT+TGG | 0.294047 | tig0026478:+1673 | Msa1429250:CDS |
TCAAAGGCTTCACATGTCAT+AGG | 0.312294 | tig0026478:+2749 | Msa1429250:three_prime_UTR |
TTACATTGTTTGGTTCTGGC+TGG | 0.329309 | tig0026478:+1683 | Msa1429250:CDS |
TCCTTAAGGATTTATCAGTA+TGG | 0.332324 | tig0026478:+3033 | Msa1429250:three_prime_UTR |
GGAGGTGATAGGCCCATTCT+AGG | 0.369142 | tig0026478:+1589 | Msa1429250:CDS |
ACTGAGGAAAATCTGCAAAA+TGG | 0.375899 | tig0026478:+2888 | Msa1429250:three_prime_UTR |
TGTTTGGTTCTGGCTGGGTT+TGG | 0.376067 | tig0026478:+1689 | Msa1429250:CDS |
TTGGAATCATGACTTCTTCT+GGG | 0.399356 | tig0026478:+1549 | Msa1429250:CDS |
AATGCAGCATGCATACTATC+TGG | 0.401361 | tig0026478:+2445 | Msa1429250:intron |
AAATCCTTAAGGAGAAGTTT+AGG | 0.403849 | tig0026478:-3023 | None:intergenic |
ATTGTCTGCTTGCTCATATA+TGG | 0.406654 | tig0026478:-716 | None:intergenic |
TTCTGAACCACCTTGTGTCT+TGG | 0.411846 | tig0026478:+2585 | Msa1429250:CDS |
GCAAATCAATTTGGATTTGT+GGG | 0.413151 | tig0026478:+2309 | Msa1429250:CDS |
TCCACTCCTTCCTTTCTGGC+TGG | 0.414148 | tig0026478:-2785 | None:intergenic |
CTTCTGGGAATCCATGCAAC+CGG | 0.415502 | tig0026478:+1564 | Msa1429250:CDS |
AGCAAATCAATTTGGATTTG+TGG | 0.418009 | tig0026478:+2308 | Msa1429250:CDS |
TACATTGTTTGGTTCTGGCT+GGG | 0.439690 | tig0026478:+1684 | Msa1429250:CDS |
CAAGGCATCTTAAATGGAGT+TGG | 0.440705 | tig0026478:+2718 | Msa1429250:three_prime_UTR |
GCTGCCTAAACTTCTCCTTA+AGG | 0.445159 | tig0026478:+3019 | Msa1429250:three_prime_UTR |
GGAGTTGGTTTGAAATTCAA+AGG | 0.467292 | tig0026478:+2733 | Msa1429250:three_prime_UTR |
AGCAGACAATCGACATGCAC+TGG | 0.468183 | tig0026478:+729 | Msa1429250:CDS |
TCCATACTGATAAATCCTTA+AGG | 0.475628 | tig0026478:-3034 | None:intergenic |
ATCACCTCCTCCCGGTTGCA+TGG | 0.477767 | tig0026478:-1575 | None:intergenic |
GCACATCTACGTGGCAATCC+AGG | 0.491071 | tig0026478:-3099 | None:intergenic |
CTGTTGAAGGAGACCTAGAA+TGG | 0.492826 | tig0026478:-1602 | None:intergenic |
TGCAACCGGGAGGAGGTGAT+AGG | 0.497633 | tig0026478:+1578 | Msa1429250:CDS |
TTTCTGCTTAAATACAATTG+AGG | 0.500446 | tig0026478:-205 | None:intergenic |
TCTCCTTCAACAGATTGAAA+AGG | 0.504146 | tig0026478:+1612 | Msa1429250:CDS |
CAAAGGCTTCACATGTCATA+GGG | 0.515600 | tig0026478:+2750 | Msa1429250:three_prime_UTR |
CACTTACATGTTCGTAGGGA+GGG | 0.519044 | tig0026478:-287 | None:intergenic |
CTGCAACGGAACGCTTGACA+TGG | 0.522432 | tig0026478:+2612 | Msa1429250:CDS |
TGCACTGGGGAGAGCATCAT+CGG | 0.535998 | tig0026478:+744 | Msa1429250:CDS |
CTGCTTAAATACAATTGAGG+AGG | 0.544378 | tig0026478:-202 | None:intergenic |
TGGTACACTTACATGTTCGT+AGG | 0.546092 | tig0026478:-292 | None:intergenic |
ATCCAAATTGATTTGCTGCA+CGG | 0.555435 | tig0026478:-2302 | None:intergenic |
TTCTGGGAATCCATGCAACC+GGG | 0.558653 | tig0026478:+1565 | Msa1429250:CDS |
GAATCCATGCAACCGGGAGG+AGG | 0.560022 | tig0026478:+1571 | Msa1429250:CDS |
GGCTTCACATGTCATAGGGT+TGG | 0.560208 | tig0026478:+2754 | Msa1429250:three_prime_UTR |
GCAGACAATCGACATGCACT+GGG | 0.561935 | tig0026478:+730 | Msa1429250:CDS |
GGATGTAGTGAACTTAGTAT+GGG | 0.562995 | tig0026478:+2913 | Msa1429250:three_prime_UTR |
GCCAGCCAGAAAGGAAGGAG+TGG | 0.563875 | tig0026478:+2784 | Msa1429250:three_prime_UTR |
GGTCGTACAGCCAGCCAGAA+AGG | 0.565896 | tig0026478:+2775 | Msa1429250:three_prime_UTR |
TGCATACTATCTGGATTACA+AGG | 0.567151 | tig0026478:+2454 | Msa1429250:CDS |
GTACAGCCAGCCAGAAAGGA+AGG | 0.569051 | tig0026478:+2779 | Msa1429250:three_prime_UTR |
ACTTACATGTTCGTAGGGAG+GGG | 0.579268 | tig0026478:-286 | None:intergenic |
TGCAACGGAACGCTTGACAT+GGG | 0.580555 | tig0026478:+2613 | Msa1429250:CDS |
TGTTGAAGGAGACCTAGAAT+GGG | 0.585469 | tig0026478:-1601 | None:intergenic |
GGAACGCTTGACATGGGGAG+AGG | 0.586433 | tig0026478:+2619 | Msa1429250:CDS |
AGGAAAATCTGCAAAATGGA+GGG | 0.588466 | tig0026478:+2892 | Msa1429250:three_prime_UTR |
GGTACACTTACATGTTCGTA+GGG | 0.593745 | tig0026478:-291 | None:intergenic |
GAGGAAAATCTGCAAAATGG+AGG | 0.597242 | tig0026478:+2891 | Msa1429250:three_prime_UTR |
TTAAGGAGAAGTTTAGGCAG+CGG | 0.597707 | tig0026478:-3017 | None:intergenic |
GCATTGTTGAACTCAGGTGA+GGG | 0.599120 | tig0026478:-865 | None:intergenic |
TGCATTGTTGAACTCAGGTG+AGG | 0.604713 | tig0026478:-866 | None:intergenic |
TCAGCTGCATTGTTGAACTC+AGG | 0.612280 | tig0026478:-871 | None:intergenic |
TGAGTTCAACAATGCAGCTG+AGG | 0.616915 | tig0026478:+873 | Msa1429250:CDS |
ATGGGCCTATCACCTCCTCC+CGG | 0.618331 | tig0026478:-1583 | None:intergenic |
AATCAATTTGGATTTGTGGG+AGG | 0.621467 | tig0026478:+2312 | Msa1429250:CDS |
TGTGTCTTGGAATACTGCAA+CGG | 0.632552 | tig0026478:+2598 | Msa1429250:CDS |
AAGTTTAGGCAGCGGCAATG+TGG | 0.636851 | tig0026478:-3009 | None:intergenic |
TGAACTTAGTATGGGAGACA+AGG | 0.637041 | tig0026478:+2921 | Msa1429250:three_prime_UTR |
GATTACTATACTTATGAACA+AGG | 0.639840 | tig0026478:+2700 | Msa1429250:three_prime_UTR |
AAGGATTTATCAGTATGGAA+CGG | 0.648053 | tig0026478:+3038 | Msa1429250:three_prime_UTR |
CAGTATTCCAAGACACAAGG+TGG | 0.655045 | tig0026478:-2592 | None:intergenic |
ACACTTACATGTTCGTAGGG+AGG | 0.658707 | tig0026478:-288 | None:intergenic |
GATAACCAGAAAGAAGCACA+TGG | 0.662417 | tig0026478:-2842 | None:intergenic |
TTCATTGGAGCACATCTACG+TGG | 0.664036 | tig0026478:-3108 | None:intergenic |
GTCAAAGTGACATACAACAA+TGG | 0.665004 | tig0026478:+838 | Msa1429250:intron |
GCAACGGAACGCTTGACATG+GGG | 0.668746 | tig0026478:+2614 | Msa1429250:CDS |
TTGCAGTATTCCAAGACACA+AGG | 0.680864 | tig0026478:-2595 | None:intergenic |
TGGGAATCCATGCAACCGGG+AGG | 0.708383 | tig0026478:+1568 | Msa1429250:CDS |
GCTGTGTTAGTGTAGGACTG+AGG | 0.717498 | tig0026478:+2872 | Msa1429250:three_prime_UTR |
ATAACCAGAAAGAAGCACAT+GGG | 0.744709 | tig0026478:-2841 | None:intergenic |
CAGACAATCGACATGCACTG+GGG | 0.790084 | tig0026478:+731 | Msa1429250:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTATATTACATAATAAAATT+AGG | + | tig0026478:996-1015 | Msa1429250:intron | 10.0% |
!!! | TTCAATAAATGATTTTTATT+TGG | + | tig0026478:1266-1285 | Msa1429250:intron | 10.0% |
!! | TCTGTATTAAAAAAAAAAAA+AGG | - | tig0026478:3234-3253 | None:intergenic | 10.0% |
!! | ATCATTTATTTGGTTAAAAT+CGG | - | tig0026478:475-494 | None:intergenic | 15.0% |
!! | TTCTTTCTTTATCATTTATT+TGG | - | tig0026478:485-504 | None:intergenic | 15.0% |
!!! | TATGACTAAATACATTTTTA+TGG | - | tig0026478:1109-1128 | None:intergenic | 15.0% |
!!! | TAATTTTTCATGAACTTTTT+TGG | - | tig0026478:3205-3224 | None:intergenic | 15.0% |
!!! | CAATTTTTTTTTCTGATTTG+TGG | + | tig0026478:169-188 | Msa1429250:CDS | 20.0% |
!!! | TACATTTTTGAGTTTGTTAA+AGG | - | tig0026478:632-651 | None:intergenic | 20.0% |
!!! | TGATCTTTTAAAGTTGATTA+TGG | + | tig0026478:924-943 | Msa1429250:intron | 20.0% |
!!! | TTTGAAACTATATCAATGTA+AGG | + | tig0026478:1153-1172 | Msa1429250:intron | 20.0% |
!! | TTATTAATGACACGTAAAAA+TGG | - | tig0026478:1228-1247 | None:intergenic | 20.0% |
!! | CAATAACAAAATTACAATTG+TGG | + | tig0026478:1450-1469 | Msa1429250:intron | 20.0% |
!! | GCATATTAAGAAGATAATAT+GGG | - | tig0026478:1792-1811 | None:intergenic | 20.0% |
!! | TTAATATGCCATAAAATCAT+TGG | + | tig0026478:1803-1822 | Msa1429250:intron | 20.0% |
!! | AATTCAGAAAAACAAAATCT+TGG | - | tig0026478:1884-1903 | None:intergenic | 20.0% |
!!! | ATTTACATATTTTATGCTTG+AGG | + | tig0026478:1935-1954 | Msa1429250:intron | 20.0% |
!!! | GACAGATTTTATATAATGAA+GGG | - | tig0026478:2245-2264 | None:intergenic | 20.0% |
!!! | ATTTCAATATTTTATGCAAC+AGG | - | tig0026478:2673-2692 | None:intergenic | 20.0% |
!!! | TTCATAACTTTTGTTTTCAT+TGG | - | tig0026478:3126-3145 | None:intergenic | 20.0% |
!! | ATCATTGAGTTTCAAATAAT+AGG | - | tig0026478:3156-3175 | None:intergenic | 20.0% |
! | TTTCTGCTTAAATACAATTG+AGG | - | tig0026478:208-227 | None:intergenic | 25.0% |
! | TTGTATTTAAGCAGAAAAAG+AGG | + | tig0026478:211-230 | Msa1429250:CDS | 25.0% |
!! | TCAAAAGTTACAGCATTTTA+TGG | + | tig0026478:255-274 | Msa1429250:CDS | 25.0% |
! | TATATCTCCAATCAAAAACA+TGG | - | tig0026478:333-352 | None:intergenic | 25.0% |
!!! | ACTGTTTTAACCTATATACT+TGG | + | tig0026478:352-371 | Msa1429250:intron | 25.0% |
! | TTCAACTAATCCAAGTATAT+AGG | - | tig0026478:365-384 | None:intergenic | 25.0% |
! | TAATTGAAGGATCAACAAAA+AGG | - | tig0026478:602-621 | None:intergenic | 25.0% |
!!! | TTTTTGAGTTTGTTAAAGGT+TGG | - | tig0026478:628-647 | None:intergenic | 25.0% |
! | AAGTTAGAATCATGATATGA+AGG | - | tig0026478:660-679 | None:intergenic | 25.0% |
!! | TTTGTTGCTTCAATATTCAT+AGG | + | tig0026478:682-701 | Msa1429250:intron | 25.0% |
! | ATGTCTTTAATTGTAGAATG+TGG | + | tig0026478:1129-1148 | Msa1429250:intron | 25.0% |
! | TGTCTTTAATTGTAGAATGT+GGG | + | tig0026478:1130-1149 | Msa1429250:intron | 25.0% |
! | ATAAATGAATACTCTTTCTG+TGG | + | tig0026478:1187-1206 | Msa1429250:intron | 25.0% |
! | GGCATATTAAGAAGATAATA+TGG | - | tig0026478:1793-1812 | None:intergenic | 25.0% |
!!! | AATTCTCATTTTTATCTCAC+TGG | + | tig0026478:1908-1927 | Msa1429250:intron | 25.0% |
!!! | ATTCTCATTTTTATCTCACT+GGG | + | tig0026478:1909-1928 | Msa1429250:intron | 25.0% |
! | AAACATTTGCAACAATCAAT+CGG | - | tig0026478:2122-2141 | None:intergenic | 25.0% |
!! | GGACAGATTTTATATAATGA+AGG | - | tig0026478:2246-2265 | None:intergenic | 25.0% |
!! | GTCCTATTTGAAATTTGAAA+TGG | + | tig0026478:2262-2281 | Msa1429250:intron | 25.0% |
! | CTCCATTTCAAATTTCAAAT+AGG | - | tig0026478:2267-2286 | None:intergenic | 25.0% |
!! | TTTTATGCAACAGGAATTTT+AGG | - | tig0026478:2664-2683 | None:intergenic | 25.0% |
! | GATTACTATACTTATGAACA+AGG | + | tig0026478:2700-2719 | Msa1429250:three_prime_UTR | 25.0% |
! | ACTCAATGATAAAAACTTGT+TGG | + | tig0026478:3166-3185 | Msa1429250:three_prime_UTR | 25.0% |
TTTAAGCAGAAAAAGAGGTT+TGG | + | tig0026478:216-235 | Msa1429250:CDS | 30.0% | |
TCCAATCAAAAACATGGATT+CGG | - | tig0026478:327-346 | None:intergenic | 30.0% | |
AAAACATTAGTGATCGACAA+AGG | + | tig0026478:518-537 | Msa1429250:intron | 30.0% | |
AAACATTAGTGATCGACAAA+GGG | + | tig0026478:519-538 | Msa1429250:intron | 30.0% | |
TAAAGGTTGGACTTAATTGA+AGG | - | tig0026478:615-634 | None:intergenic | 30.0% | |
TGGAAGGATGATATACTTTA+TGG | + | tig0026478:796-815 | Msa1429250:intron | 30.0% | |
TATACTTTATGGTTACACCT+TGG | + | tig0026478:807-826 | Msa1429250:intron | 30.0% | |
! | GCATTTTGAATAGGTTTATG+TGG | - | tig0026478:970-989 | None:intergenic | 30.0% |
!! | TACACTGAAGCATTTTGAAT+AGG | - | tig0026478:979-998 | None:intergenic | 30.0% |
!! | ATCCCAAGTGTTGATAATAT+TGG | + | tig0026478:1026-1045 | Msa1429250:intron | 30.0% |
TGCCAATATTATCAACACTT+GGG | - | tig0026478:1031-1050 | None:intergenic | 30.0% | |
ATGCCAATATTATCAACACT+TGG | - | tig0026478:1032-1051 | None:intergenic | 30.0% | |
GAAACTATATCAATGTAAGG+TGG | + | tig0026478:1156-1175 | Msa1429250:intron | 30.0% | |
CCAAAAATATCTACATCACA+TGG | - | tig0026478:1405-1424 | None:intergenic | 30.0% | |
! | CCATGTGATGTAGATATTTT+TGG | + | tig0026478:1402-1421 | Msa1429250:intron | 30.0% |
CGGAAGAGGAAAAAATAATT+AGG | - | tig0026478:1523-1542 | None:intergenic | 30.0% | |
!!! | TTATTTTTTCCTCTTCCGAA+AGG | + | tig0026478:1525-1544 | Msa1429250:intron | 30.0% |
! | AATCCTTTTCAATCTGTTGA+AGG | - | tig0026478:1618-1637 | None:intergenic | 30.0% |
! | CAACAGATTGAAAAGGATTT+TGG | + | tig0026478:1619-1638 | Msa1429250:CDS | 30.0% |
! | AGAGAAGTCCAATGATTTTA+TGG | - | tig0026478:1814-1833 | None:intergenic | 30.0% |
!! | GTGGTTTAGTTCTACAATAA+TGG | + | tig0026478:1982-2001 | Msa1429250:intron | 30.0% |
ACCTTATTGTTTGATATTGC+CGG | + | tig0026478:2057-2076 | Msa1429250:intron | 30.0% | |
AGTAAAAAAAAAGGGCAACT+TGG | - | tig0026478:2095-2114 | None:intergenic | 30.0% | |
TGATTGTTGCAAATGTTTGT+TGG | + | tig0026478:2124-2143 | Msa1429250:intron | 30.0% | |
!! | GGCATTTGAAGTTTTAACAA+TGG | - | tig0026478:2183-2202 | None:intergenic | 30.0% |
AGCAAATCAATTTGGATTTG+TGG | + | tig0026478:2308-2327 | Msa1429250:CDS | 30.0% | |
GCAAATCAATTTGGATTTGT+GGG | + | tig0026478:2309-2328 | Msa1429250:CDS | 30.0% | |
ATAGCAACAACCTTTATGTT+AGG | + | tig0026478:2397-2416 | Msa1429250:intron | 30.0% | |
AAATAAGCGACGATATATGA+TGG | - | tig0026478:2487-2506 | None:intergenic | 30.0% | |
! | TATGAACAAGGCATCTTAAA+TGG | + | tig0026478:2712-2731 | Msa1429250:three_prime_UTR | 30.0% |
!! | TATTTTTGCTGTGTTAGTGT+AGG | + | tig0026478:2865-2884 | Msa1429250:three_prime_UTR | 30.0% |
AAATCCTTAAGGAGAAGTTT+AGG | - | tig0026478:3026-3045 | None:intergenic | 30.0% | |
TCCTTAAGGATTTATCAGTA+TGG | + | tig0026478:3033-3052 | Msa1429250:three_prime_UTR | 30.0% | |
TCCATACTGATAAATCCTTA+AGG | - | tig0026478:3037-3056 | None:intergenic | 30.0% | |
AAGGATTTATCAGTATGGAA+CGG | + | tig0026478:3038-3057 | Msa1429250:three_prime_UTR | 30.0% | |
GGAACGGTAAGTTAAAAATA+AGG | + | tig0026478:3054-3073 | Msa1429250:three_prime_UTR | 30.0% | |
! | TTGCAATTTTGTATGAAACC+TGG | + | tig0026478:3081-3100 | Msa1429250:three_prime_UTR | 30.0% |
!!! | TTCATGAACTTTTTTGGACT+TGG | - | tig0026478:3199-3218 | None:intergenic | 30.0% |
CTGCTTAAATACAATTGAGG+AGG | - | tig0026478:205-224 | None:intergenic | 35.0% | |
!! | GCTGTAACTTTTGAAGATCT+GGG | - | tig0026478:249-268 | None:intergenic | 35.0% |
!! | TGCTGTAACTTTTGAAGATC+TGG | - | tig0026478:250-269 | None:intergenic | 35.0% |
CCAATCAAAAACATGGATTC+GGG | - | tig0026478:326-345 | None:intergenic | 35.0% | |
AAATATGACGATGCAACGTA+TGG | - | tig0026478:422-441 | None:intergenic | 35.0% | |
ATGAACAGCAACAAAAGCAA+TGG | - | tig0026478:570-589 | None:intergenic | 35.0% | |
TTGAAGGATCAACAAAAAGG+AGG | - | tig0026478:599-618 | None:intergenic | 35.0% | |
ATTGTCTGCTTGCTCATATA+TGG | - | tig0026478:719-738 | None:intergenic | 35.0% | |
! | CATCATCGGAATTTTGTTGA+AGG | + | tig0026478:758-777 | Msa1429250:CDS | 35.0% |
GTCAAAGTGACATACAACAA+TGG | + | tig0026478:838-857 | Msa1429250:intron | 35.0% | |
ACAAGTTTCCGGTTATGAAT+GGG | - | tig0026478:1059-1078 | None:intergenic | 35.0% | |
! | GTAAAAATGGAAAAGAGTGC+AGG | - | tig0026478:1215-1234 | None:intergenic | 35.0% |
! | TTACCTAGCTTGCATGAAAT+TGG | + | tig0026478:1300-1319 | Msa1429250:intron | 35.0% |
TTTCCAATTTCATGCAAGCT+AGG | - | tig0026478:1306-1325 | None:intergenic | 35.0% | |
ATATCTACATCACATGGACT+GGG | - | tig0026478:1399-1418 | None:intergenic | 35.0% | |
AATATCTACATCACATGGAC+TGG | - | tig0026478:1400-1419 | None:intergenic | 35.0% | |
AGTCATGATTCCAAACCTTT+CGG | - | tig0026478:1543-1562 | None:intergenic | 35.0% | |
! | TTTGGAATCATGACTTCTTC+TGG | + | tig0026478:1548-1567 | Msa1429250:CDS | 35.0% |
TTGGAATCATGACTTCTTCT+GGG | + | tig0026478:1549-1568 | Msa1429250:CDS | 35.0% | |
TCTCCTTCAACAGATTGAAA+AGG | + | tig0026478:1612-1631 | Msa1429250:CDS | 35.0% | |
AAGGGGGAATCAATTAGAAA+AGG | - | tig0026478:1728-1747 | None:intergenic | 35.0% | |
! | GTCACTTGTCTTTTGTCATT+TGG | + | tig0026478:1960-1979 | Msa1429250:intron | 35.0% |
!! | ACTTGTCTTTTGTCATTTGG+TGG | + | tig0026478:1963-1982 | Msa1429250:intron | 35.0% |
! | ATAGTTCTACACAACAGTCT+GGG | - | tig0026478:2012-2031 | None:intergenic | 35.0% |
TCGGCAGCAGTAAAAAAAAA+GGG | - | tig0026478:2103-2122 | None:intergenic | 35.0% | |
ATCGGCAGCAGTAAAAAAAA+AGG | - | tig0026478:2104-2123 | None:intergenic | 35.0% | |
!! | ATCCAAATTGATTTGCTGCA+CGG | - | tig0026478:2305-2324 | None:intergenic | 35.0% |
AATCAATTTGGATTTGTGGG+AGG | + | tig0026478:2312-2331 | Msa1429250:CDS | 35.0% | |
!!! | CTTGTGTTGTTTTGTGTTGT+AGG | - | tig0026478:2357-2376 | None:intergenic | 35.0% |
TGCATACTATCTGGATTACA+AGG | + | tig0026478:2454-2473 | Msa1429250:CDS | 35.0% | |
!! | GGAGTTGGTTTGAAATTCAA+AGG | + | tig0026478:2733-2752 | Msa1429250:three_prime_UTR | 35.0% |
! | ATAACCAGAAAGAAGCACAT+GGG | - | tig0026478:2844-2863 | None:intergenic | 35.0% |
ACTGAGGAAAATCTGCAAAA+TGG | + | tig0026478:2888-2907 | Msa1429250:three_prime_UTR | 35.0% | |
AGGAAAATCTGCAAAATGGA+GGG | + | tig0026478:2892-2911 | Msa1429250:three_prime_UTR | 35.0% | |
GGATGTAGTGAACTTAGTAT+GGG | + | tig0026478:2913-2932 | Msa1429250:three_prime_UTR | 35.0% | |
GGTACACTTACATGTTCGTA+GGG | - | tig0026478:294-313 | None:intergenic | 40.0% | |
TGGTACACTTACATGTTCGT+AGG | - | tig0026478:295-314 | None:intergenic | 40.0% | |
CATGGATTCGGGTAACTATA+TGG | - | tig0026478:315-334 | None:intergenic | 40.0% | |
!! | CCCGAATCCATGTTTTTGAT+TGG | + | tig0026478:323-342 | Msa1429250:intron | 40.0% |
CAGCAACAAAAGCAATGGAA+AGG | - | tig0026478:565-584 | None:intergenic | 40.0% | |
! | CACTTTGACTAGTTCATCCA+AGG | - | tig0026478:827-846 | None:intergenic | 40.0% |
! | AGTTGATTATGGCTCTGTAG+CGG | + | tig0026478:935-954 | Msa1429250:intron | 40.0% |
CAAGTTTCCGGTTATGAATG+GGG | - | tig0026478:1058-1077 | None:intergenic | 40.0% | |
CACAAGTTTCCGGTTATGAA+TGG | - | tig0026478:1060-1079 | None:intergenic | 40.0% | |
TCAGAAGAGTTTCAGACTCT+CGG | - | tig0026478:1084-1103 | None:intergenic | 40.0% | |
! | TTTTCCTCTTCCGAAAGGTT+TGG | + | tig0026478:1530-1549 | Msa1429250:intron | 40.0% |
TGTTGAAGGAGACCTAGAAT+GGG | - | tig0026478:1604-1623 | None:intergenic | 40.0% | |
GAAGCTGCACTTACATTGTT+TGG | + | tig0026478:1673-1692 | Msa1429250:CDS | 40.0% | |
! | GCACTTACATTGTTTGGTTC+TGG | + | tig0026478:1679-1698 | Msa1429250:CDS | 40.0% |
!! | TTACATTGTTTGGTTCTGGC+TGG | + | tig0026478:1683-1702 | Msa1429250:CDS | 40.0% |
!! | TACATTGTTTGGTTCTGGCT+GGG | + | tig0026478:1684-1703 | Msa1429250:CDS | 40.0% |
CACATCACTTTAGCAAGACA+GGG | - | tig0026478:1753-1772 | None:intergenic | 40.0% | |
ACACATCACTTTAGCAAGAC+AGG | - | tig0026478:1754-1773 | None:intergenic | 40.0% | |
! | CATAGTTCTACACAACAGTC+TGG | - | tig0026478:2013-2032 | None:intergenic | 40.0% |
GCCGGCAATATCAAACAATA+AGG | - | tig0026478:2061-2080 | None:intergenic | 40.0% | |
CTATATCACCCCACACAATT+GGG | - | tig0026478:2211-2230 | None:intergenic | 40.0% | |
ACTATATCACCCCACACAAT+TGG | - | tig0026478:2212-2231 | None:intergenic | 40.0% | |
GTCAGTGATGCCTAACATAA+AGG | - | tig0026478:2410-2429 | None:intergenic | 40.0% | |
AGATAGTATGCATGCTGCAT+TGG | - | tig0026478:2446-2465 | None:intergenic | 40.0% | |
AATGCAGCATGCATACTATC+TGG | + | tig0026478:2445-2464 | Msa1429250:intron | 40.0% | |
! | TTCTCACGTCGTGTAACTTT+TGG | + | tig0026478:2530-2549 | Msa1429250:intron | 40.0% |
TTGCAGTATTCCAAGACACA+AGG | - | tig0026478:2598-2617 | None:intergenic | 40.0% | |
TGTGTCTTGGAATACTGCAA+CGG | + | tig0026478:2598-2617 | Msa1429250:CDS | 40.0% | |
! | CAAGGCATCTTAAATGGAGT+TGG | + | tig0026478:2718-2737 | Msa1429250:three_prime_UTR | 40.0% |
TCAAAGGCTTCACATGTCAT+AGG | + | tig0026478:2749-2768 | Msa1429250:three_prime_UTR | 40.0% | |
CAAAGGCTTCACATGTCATA+GGG | + | tig0026478:2750-2769 | Msa1429250:three_prime_UTR | 40.0% | |
! | GATAACCAGAAAGAAGCACA+TGG | - | tig0026478:2845-2864 | None:intergenic | 40.0% |
GAGGAAAATCTGCAAAATGG+AGG | + | tig0026478:2891-2910 | Msa1429250:three_prime_UTR | 40.0% | |
GGGATGTAGTGAACTTAGTA+TGG | + | tig0026478:2912-2931 | Msa1429250:three_prime_UTR | 40.0% | |
TGAACTTAGTATGGGAGACA+AGG | + | tig0026478:2921-2940 | Msa1429250:three_prime_UTR | 40.0% | |
TTAAGGAGAAGTTTAGGCAG+CGG | - | tig0026478:3020-3039 | None:intergenic | 40.0% | |
ACTTACATGTTCGTAGGGAG+GGG | - | tig0026478:289-308 | None:intergenic | 45.0% | |
CACTTACATGTTCGTAGGGA+GGG | - | tig0026478:290-309 | None:intergenic | 45.0% | |
ACACTTACATGTTCGTAGGG+AGG | - | tig0026478:291-310 | None:intergenic | 45.0% | |
GAAGGTTTGAACGAACAGCT+TGG | + | tig0026478:776-795 | Msa1429250:intron | 45.0% | |
GTTTGAACGAACAGCTTGGA+AGG | + | tig0026478:780-799 | Msa1429250:intron | 45.0% | |
GCATTGTTGAACTCAGGTGA+GGG | - | tig0026478:868-887 | None:intergenic | 45.0% | |
TGCATTGTTGAACTCAGGTG+AGG | - | tig0026478:869-888 | None:intergenic | 45.0% | |
TCAGCTGCATTGTTGAACTC+AGG | - | tig0026478:874-893 | None:intergenic | 45.0% | |
TGAGTTCAACAATGCAGCTG+AGG | + | tig0026478:873-892 | Msa1429250:CDS | 45.0% | |
GCATCTTCCCCATTCATAAC+CGG | + | tig0026478:1048-1067 | Msa1429250:intron | 45.0% | |
CAGAAGAGTTTCAGACTCTC+GGG | - | tig0026478:1083-1102 | None:intergenic | 45.0% | |
AATTGTCTGCCCAATCTGTG+TGG | + | tig0026478:1324-1343 | Msa1429250:intron | 45.0% | |
ATTGTCTGCCCAATCTGTGT+GGG | + | tig0026478:1325-1344 | Msa1429250:intron | 45.0% | |
! | AGCCTTATCCCACACAGATT+GGG | - | tig0026478:1336-1355 | None:intergenic | 45.0% |
! | AAGCCTTATCCCACACAGAT+TGG | - | tig0026478:1337-1356 | None:intergenic | 45.0% |
AATCTGTGTGGGATAAGGCT+TGG | + | tig0026478:1336-1355 | Msa1429250:intron | 45.0% | |
GATTCCAAACCTTTCGGAAG+AGG | - | tig0026478:1537-1556 | None:intergenic | 45.0% | |
CTGTTGAAGGAGACCTAGAA+TGG | - | tig0026478:1605-1624 | None:intergenic | 45.0% | |
TTTAGCAAGACAGGGAGAAG+GGG | - | tig0026478:1745-1764 | None:intergenic | 45.0% | |
CTTTAGCAAGACAGGGAGAA+GGG | - | tig0026478:1746-1765 | None:intergenic | 45.0% | |
ACTTTAGCAAGACAGGGAGA+AGG | - | tig0026478:1747-1766 | None:intergenic | 45.0% | |
!! | AACTTGGTGCACTAAATCGC+CGG | - | tig0026478:2079-2098 | None:intergenic | 45.0% |
! | ATGCCATTTGCCCAATTGTG+TGG | + | tig0026478:2198-2217 | Msa1429250:intron | 45.0% |
! | TGCCATTTGCCCAATTGTGT+GGG | + | tig0026478:2199-2218 | Msa1429250:intron | 45.0% |
CTCCGTGCAGCAAATCAATT+TGG | + | tig0026478:2300-2319 | Msa1429250:CDS | 45.0% | |
TTCTGAACCACCTTGTGTCT+TGG | + | tig0026478:2585-2604 | Msa1429250:CDS | 45.0% | |
CAGTATTCCAAGACACAAGG+TGG | - | tig0026478:2595-2614 | None:intergenic | 45.0% | |
! | GGAGAGGCTTTTGTGAACTT+GGG | + | tig0026478:2635-2654 | Msa1429250:CDS | 45.0% |
GCTGCCTAAACTTCTCCTTA+AGG | + | tig0026478:3019-3038 | Msa1429250:three_prime_UTR | 45.0% | |
TTCATTGGAGCACATCTACG+TGG | - | tig0026478:3111-3130 | None:intergenic | 45.0% | |
AGCAGACAATCGACATGCAC+TGG | + | tig0026478:729-748 | Msa1429250:CDS | 50.0% | |
GCAGACAATCGACATGCACT+GGG | + | tig0026478:730-749 | Msa1429250:CDS | 50.0% | |
CAGACAATCGACATGCACTG+GGG | + | tig0026478:731-750 | Msa1429250:CDS | 50.0% | |
TGCCCAATCTGTGTGGGATA+AGG | + | tig0026478:1331-1350 | Msa1429250:intron | 50.0% | |
! | CTTCTGGGAATCCATGCAAC+CGG | + | tig0026478:1564-1583 | Msa1429250:CDS | 50.0% |
! | TTCTGGGAATCCATGCAACC+GGG | + | tig0026478:1565-1584 | Msa1429250:CDS | 50.0% |
!! | TGTTTGGTTCTGGCTGGGTT+TGG | + | tig0026478:1689-1708 | Msa1429250:CDS | 50.0% |
TTAGCAAGACAGGGAGAAGG+GGG | - | tig0026478:1744-1763 | None:intergenic | 50.0% | |
GCCATTTGCCCAATTGTGTG+GGG | + | tig0026478:2200-2219 | Msa1429250:intron | 50.0% | |
ACCCCACACAATTGGGCAAA+TGG | - | tig0026478:2204-2223 | None:intergenic | 50.0% | |
TGCAACGGAACGCTTGACAT+GGG | + | tig0026478:2613-2632 | Msa1429250:CDS | 50.0% | |
! | GGGAGAGGCTTTTGTGAACT+TGG | + | tig0026478:2634-2653 | Msa1429250:CDS | 50.0% |
GGCTTCACATGTCATAGGGT+TGG | + | tig0026478:2754-2773 | Msa1429250:three_prime_UTR | 50.0% | |
CTGATCCACTCCTTCCTTTC+TGG | - | tig0026478:2792-2811 | None:intergenic | 50.0% | |
GCTGTGTTAGTGTAGGACTG+AGG | + | tig0026478:2872-2891 | Msa1429250:three_prime_UTR | 50.0% | |
AAGTTTAGGCAGCGGCAATG+TGG | - | tig0026478:3012-3031 | None:intergenic | 50.0% | |
!! | TGCACTGGGGAGAGCATCAT+CGG | + | tig0026478:744-763 | Msa1429250:CDS | 55.0% |
GACTCTCGGGCACAAGTTTC+CGG | - | tig0026478:1070-1089 | None:intergenic | 55.0% | |
GGAGGTGATAGGCCCATTCT+AGG | + | tig0026478:1589-1608 | Msa1429250:CDS | 55.0% | |
CTGCAACGGAACGCTTGACA+TGG | + | tig0026478:2612-2631 | Msa1429250:CDS | 55.0% | |
GCAACGGAACGCTTGACATG+GGG | + | tig0026478:2614-2633 | Msa1429250:CDS | 55.0% | |
GTACAGCCAGCCAGAAAGGA+AGG | + | tig0026478:2779-2798 | Msa1429250:three_prime_UTR | 55.0% | |
! | TCCACTCCTTCCTTTCTGGC+TGG | - | tig0026478:2788-2807 | None:intergenic | 55.0% |
GCGTCCCATGTGCTTCTTTC+TGG | + | tig0026478:2837-2856 | Msa1429250:three_prime_UTR | 55.0% | |
GCACATCTACGTGGCAATCC+AGG | - | tig0026478:3102-3121 | None:intergenic | 55.0% | |
TGGGAATCCATGCAACCGGG+AGG | + | tig0026478:1568-1587 | Msa1429250:CDS | 60.0% | |
GAATCCATGCAACCGGGAGG+AGG | + | tig0026478:1571-1590 | Msa1429250:CDS | 60.0% | |
ATCACCTCCTCCCGGTTGCA+TGG | - | tig0026478:1578-1597 | None:intergenic | 60.0% | |
TGCAACCGGGAGGAGGTGAT+AGG | + | tig0026478:1578-1597 | Msa1429250:CDS | 60.0% | |
ATGGGCCTATCACCTCCTCC+CGG | - | tig0026478:1586-1605 | None:intergenic | 60.0% | |
GGAACGCTTGACATGGGGAG+AGG | + | tig0026478:2619-2638 | Msa1429250:CDS | 60.0% | |
GGTCGTACAGCCAGCCAGAA+AGG | + | tig0026478:2775-2794 | Msa1429250:three_prime_UTR | 60.0% | |
GCCAGCCAGAAAGGAAGGAG+TGG | + | tig0026478:2784-2803 | Msa1429250:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0026478 | gene | 168 | 3258 | 168 | ID=Msa1429250;Name=Msa1429250 |
tig0026478 | mRNA | 168 | 3258 | 168 | ID=Msa1429250-mRNA-1;Parent=Msa1429250;Name=Msa1429250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.66|0.42|1|0.83|0.85|7|561|216 |
tig0026478 | exon | 168 | 302 | 168 | ID=Msa1429250-mRNA-1:exon:6437;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 704 | 779 | 704 | ID=Msa1429250-mRNA-1:exon:6438;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 839 | 894 | 839 | ID=Msa1429250-mRNA-1:exon:6439;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 1547 | 1718 | 1547 | ID=Msa1429250-mRNA-1:exon:6440;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 2287 | 2333 | 2287 | ID=Msa1429250-mRNA-1:exon:6441;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 2452 | 2475 | 2452 | ID=Msa1429250-mRNA-1:exon:6442;Parent=Msa1429250-mRNA-1 |
tig0026478 | exon | 2557 | 3258 | 2557 | ID=Msa1429250-mRNA-1:exon:6443;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 168 | 302 | 168 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 704 | 779 | 704 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 839 | 894 | 839 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 1547 | 1718 | 1547 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 2287 | 2333 | 2287 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 2452 | 2475 | 2452 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | CDS | 2557 | 2697 | 2557 | ID=Msa1429250-mRNA-1:cds;Parent=Msa1429250-mRNA-1 |
tig0026478 | three_prime_UTR | 2698 | 3258 | 2698 | ID=Msa1429250-mRNA-1:three_prime_utr;Parent=Msa1429250-mRNA-1 |
Gene Sequence |
Protein sequence |