AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0075300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075300 MtrunA17_Chr1g0183781 95.592 726 31 1 1 726 1 725 0.0 1361
Msa0075300 MtrunA17_Chr7g0261371 64.875 800 206 6 1 726 1 799 0.0 946
Msa0075300 MtrunA17_Chr3g0106931 67.742 279 90 0 438 716 551 829 8.93e-111 355
Msa0075300 MtrunA17_Chr3g0106931 39.130 299 182 0 14 312 6 304 2.21e-59 215
Msa0075300 MtrunA17_Chr1g0152561 53.237 278 129 1 440 716 61 338 5.18e-85 272
Msa0075300 MtrunA17_Chr3g0134761 47.468 316 159 3 414 724 27 340 1.51e-82 265
Msa0075300 MtrunA17_Chr2g0290151 52.143 280 133 1 444 722 179 458 7.73e-79 259
Msa0075300 MtrunA17_Chr4g0031431 46.263 281 150 1 438 717 351 631 1.48e-69 240
Msa0075300 MtrunA17_Chr4g0031431 25.610 656 389 18 31 634 23 631 3.07e-44 169
Msa0075300 MtrunA17_Chr4g0044411 46.545 275 146 1 440 713 373 647 2.51e-68 237
Msa0075300 MtrunA17_Chr4g0044411 31.579 380 226 10 241 611 273 627 3.24e-38 151
Msa0075300 MtrunA17_Chr7g0248251 48.327 269 136 3 443 709 370 637 7.21e-63 221
Msa0075300 MtrunA17_Chr1g0199321 49.077 271 137 1 440 709 345 615 1.55e-62 220
Msa0075300 MtrunA17_Chr1g0199321 26.878 599 374 14 14 587 15 574 7.88e-41 159
Msa0075300 MtrunA17_Chr7g0237931 43.110 283 157 2 427 709 324 602 9.48e-62 218
Msa0075300 MtrunA17_Chr7g0237931 25.926 459 279 14 172 591 171 607 4.84e-27 116
Msa0075300 MtrunA17_Chr8g0377151 33.060 487 257 14 242 716 283 712 1.74e-54 200
Msa0075300 MtrunA17_Chr5g0437411 39.935 308 179 5 408 709 373 680 4.32e-53 195
Msa0075300 MtrunA17_Chr2g0284461 41.577 279 156 7 441 713 397 674 1.17e-42 165
Msa0075300 MtrunA17_Chr5g0404311 28.629 496 277 14 242 716 274 713 2.85e-40 158
Msa0075300 MtrunA17_Chr5g0429231 37.770 278 167 4 443 714 37 314 1.98e-38 146
Msa0075300 MtrunA17_Chr3g0122721 30.584 497 272 16 236 717 273 711 1.26e-37 150
Msa0075300 MtrunA17_Chr8g0373031 27.122 483 293 11 242 714 276 709 6.69e-37 148
Msa0075300 MtrunA17_Chr7g0234671 33.904 292 181 8 426 709 159 446 1.03e-34 138
Msa0075300 MtrunA17_Chr7g0234671 41.905 105 54 1 210 307 40 144 3.22e-21 97.4
Msa0075300 MtrunA17_Chr7g0275081 37.828 267 157 5 451 709 182 447 2.31e-33 134
Msa0075300 MtrunA17_Chr7g0275081 40.870 115 54 2 210 310 33 147 9.66e-23 102
Msa0075300 MtrunA17_Chr5g0435041 32.990 291 185 6 431 714 11 298 1.04e-31 127
Msa0075300 MtrunA17_Chr4g0059201 32.727 275 177 5 455 721 437 711 2.15e-29 124
Msa0075300 MtrunA17_Chr4g0059201 24.654 361 230 9 242 586 320 654 9.30e-20 94.4
Msa0075300 MtrunA17_Chr3g0118001 31.387 274 184 2 443 713 214 486 2.36e-29 123
Msa0075300 MtrunA17_Chr6g0449461 32.862 283 176 8 442 714 4 282 5.51e-28 115
Msa0075300 MtrunA17_Chr3g0111451 34.028 288 180 6 433 713 34 318 8.75e-26 110
Msa0075300 MtrunA17_Chr6g0451581 28.889 270 188 2 443 709 241 509 1.65e-25 111
Msa0075300 MtrunA17_Chr3g0137061 30.822 292 186 7 434 713 107 394 1.09e-24 108
Msa0075300 MtrunA17_Chr1g0149941 32.632 285 178 8 442 713 175 458 1.65e-24 108
Msa0075300 MtrunA17_Chr3g0117851 31.752 274 146 7 453 720 391 629 2.42e-24 108
Msa0075300 MtrunA17_Chr3g0117851 26.913 379 227 8 242 596 276 628 2.82e-22 102
Msa0075300 MtrunA17_Chr5g0413681 28.212 358 227 10 245 591 284 622 6.94e-23 103
Msa0075300 MtrunA17_Chr5g0413681 32.609 276 177 5 443 709 386 661 1.70e-19 93.2
Msa0075300 MtrunA17_Chr1g0189811 25.792 442 237 12 214 596 34 443 4.44e-22 100
Msa0075300 MtrunA17_Chr1g0189811 36.015 261 157 5 458 709 174 433 6.62e-22 99.4
Msa0075300 MtrunA17_Chr4g0013091 57.971 69 29 0 242 310 314 382 7.61e-22 100
Msa0075300 MtrunA17_Chr4g0013091 31.803 305 189 10 434 726 411 708 2.50e-19 92.8
Msa0075300 MtrunA17_Chr4g0044631 52.703 74 35 0 238 311 11 84 6.88e-21 95.9
Msa0075300 MtrunA17_Chr4g0048811 32.353 204 132 4 514 714 121 321 8.61e-21 94.4
Msa0075300 MtrunA17_Chr4g0048811 46.377 69 36 1 240 307 4 72 5.82e-16 79.7
Msa0075300 MtrunA17_Chr8g0350681 29.675 246 160 7 480 717 238 478 5.07e-19 91.3
Msa0075300 MtrunA17_Chr3g0110121 47.297 74 39 0 240 313 35 108 1.67e-18 89.0
Msa0075300 MtrunA17_Chr1g0198984 55.932 59 26 0 254 312 1 59 1.96e-18 81.6
Msa0075300 MtrunA17_Chr2g0280671 29.167 240 161 4 484 717 147 383 5.61e-18 86.7
Msa0075300 MtrunA17_Chr2g0280671 53.125 64 30 0 244 307 18 81 2.96e-17 84.3
Msa0075300 MtrunA17_Chr5g0420471 45.205 73 40 0 242 314 26 98 5.77e-18 87.4
Msa0075300 MtrunA17_Chr5g0434171 41.892 74 43 0 240 313 34 107 1.48e-17 85.9
Msa0075300 MtrunA17_Chr6g0479261 43.836 73 41 0 242 314 26 98 1.56e-17 85.9
Msa0075300 MtrunA17_Chr1g0177261 46.753 77 35 2 243 313 9 85 6.33e-16 80.9
Msa0075300 MtrunA17_Chr8g0384041 44.928 69 38 0 239 307 8 76 1.05e-15 80.1
Msa0075300 MtrunA17_Chr1g0177271 46.753 77 35 2 243 313 9 85 1.14e-15 80.1
Msa0075300 MtrunA17_Chr1g0177281 46.753 77 35 2 243 313 9 85 1.52e-15 79.7
Msa0075300 MtrunA17_Chr2g0283691 28.723 282 196 5 440 717 86 366 1.57e-15 79.7
Msa0075300 MtrunA17_Chr3g0129811 42.857 70 40 0 240 309 82 151 3.90e-15 79.0
Msa0075300 MtrunA17_Chr2g0322021 47.297 74 35 2 242 311 7 80 4.62e-15 77.8
Msa0075300 MtrunA17_Chr5g0400971 42.529 87 50 0 242 328 68 154 5.26e-15 78.2
Msa0075300 MtrunA17_Chr7g0246731 30.081 246 159 7 480 717 237 477 7.52e-15 78.2
Msa0075300 MtrunA17_Chr1g0196911 34.351 131 77 4 242 368 507 632 1.38e-14 78.2
Msa0075300 MtrunA17_Chr7g0275961 21.807 321 223 8 10 311 14 325 2.05e-14 77.4
Msa0075300 MtrunA17_Chr7g0215741 31.792 173 114 2 469 638 588 759 3.43e-14 76.6
Msa0075300 MtrunA17_Chr7g0215741 26.102 295 163 7 476 716 464 757 1.33e-13 74.7
Msa0075300 MtrunA17_Chr7g0267501 48.649 74 33 4 242 311 9 81 3.71e-14 75.5
Msa0075300 MtrunA17_Chr1g0199031 40.171 117 52 2 517 632 18 117 4.02e-14 69.7
Msa0075300 MtrunA17_Chr1g0177301 45.833 72 37 2 242 311 7 78 9.24e-14 73.9
Msa0075300 MtrunA17_Chr1g0152291 39.080 87 53 0 242 328 46 132 2.06e-13 73.2
Msa0075300 MtrunA17_Chr8g0353271 26.042 288 194 7 440 709 8 294 2.18e-13 72.0
Msa0075300 MtrunA17_Chr4g0025501 43.243 74 39 2 241 311 6 79 2.82e-13 72.4
Msa0075300 MtrunA17_Chr7g0247831 35.514 107 65 3 205 309 790 894 3.08e-13 73.6
Msa0075300 MtrunA17_Chr1g0202971 45.455 66 36 0 242 307 649 714 4.97e-13 72.8
Msa0075300 MtrunA17_Chr8g0390311 38.679 106 59 4 211 311 362 466 2.06e-12 71.2
Msa0075300 MtrunA17_Chr3g0084371 33.333 132 88 0 480 611 297 428 4.46e-12 69.7
Msa0075300 MtrunA17_Chr3g0124431 41.748 103 59 1 622 723 515 617 4.76e-12 70.1
Msa0075300 MtrunA17_Chr1g0159781 30.894 246 150 9 485 719 476 712 5.36e-12 69.7
Msa0075300 MtrunA17_Chr1g0159781 37.079 89 56 0 632 720 502 590 4.77e-11 66.6
Msa0075300 MtrunA17_Chr1g0205751 27.138 269 179 6 399 650 143 411 2.24e-11 67.4
Msa0075300 MtrunA17_Chr8g0346441 22.121 330 225 10 4 311 10 329 3.13e-11 67.0
Msa0075300 MtrunA17_Chr3g0079031 31.148 122 81 3 188 307 675 795 5.34e-11 66.2
Msa0075300 MtrunA17_Chr2g0328101 40.909 66 39 0 242 307 741 806 8.71e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075300 AT3G54790.3 52.865 768 305 10 7 726 2 760 0.0 714
Msa0075300 AT3G54790.1 52.865 768 305 10 7 726 2 760 0.0 714
Msa0075300 AT3G54790.2 52.705 721 284 10 54 726 13 724 0.0 675
Msa0075300 AT5G67340.1 39.972 713 397 7 14 718 13 702 1.55e-163 488
Msa0075300 AT5G67340.2 39.972 713 397 7 14 718 13 702 1.55e-163 488
Msa0075300 AT2G23140.1 36.951 820 398 14 13 716 6 822 2.14e-144 443
Msa0075300 AT2G23140.2 36.951 820 398 14 13 716 3 819 3.83e-144 442
Msa0075300 AT2G23140.4 36.951 820 398 14 13 716 3 819 3.83e-144 442
Msa0075300 AT2G23140.3 67.742 279 90 0 438 716 352 630 1.93e-122 380
Msa0075300 AT2G23140.5 67.742 279 90 0 438 716 352 630 1.93e-122 380
Msa0075300 AT3G01400.1 51.971 279 132 2 440 716 64 342 5.68e-79 257
Msa0075300 AT4G16490.1 50.000 282 138 2 444 722 189 470 1.21e-72 244
Msa0075300 AT5G58680.1 47.059 306 156 4 414 716 39 341 1.35e-71 238
Msa0075300 AT1G71020.2 45.079 315 156 5 402 713 171 471 6.22e-67 229
Msa0075300 AT1G71020.2 31.688 385 227 11 239 612 93 452 6.45e-36 142
Msa0075300 AT1G71020.2 36.527 167 100 5 558 720 231 395 2.50e-14 76.6
Msa0075300 AT1G71020.1 45.079 315 156 5 402 713 319 619 1.98e-65 229
Msa0075300 AT1G71020.1 29.563 389 230 9 239 612 241 600 5.26e-35 141
Msa0075300 AT1G71020.1 36.527 167 100 5 558 720 379 543 4.58e-14 76.3
Msa0075300 AT3G54850.1 48.951 286 145 1 438 722 345 630 1.04e-64 227
Msa0075300 AT3G54850.1 26.227 652 391 16 37 667 35 617 2.21e-46 175
Msa0075300 AT3G46510.1 44.000 300 158 4 431 721 342 640 1.19e-64 227
Msa0075300 AT3G46510.1 26.615 650 393 18 35 640 29 638 1.27e-48 182
Msa0075300 AT1G23030.1 44.964 278 151 1 438 713 331 608 6.75e-64 224
Msa0075300 AT1G23030.1 30.851 376 222 11 239 586 239 604 5.12e-34 138
Msa0075300 AT2G28830.1 43.116 276 154 3 440 712 285 560 5.16e-62 218
Msa0075300 AT2G28830.1 60.000 70 28 0 242 311 185 254 7.43e-23 103
Msa0075300 AT1G24330.1 32.657 493 268 16 236 716 268 708 5.80e-62 222
Msa0075300 AT1G24330.2 32.657 493 268 16 236 716 268 708 5.80e-62 222
Msa0075300 AT5G42340.1 45.055 273 147 3 439 709 380 651 3.03e-52 192
Msa0075300 AT5G42340.1 27.880 599 373 18 36 612 75 636 1.01e-42 165
Msa0075300 AT1G27910.1 31.463 499 267 14 237 721 274 711 2.90e-46 177
Msa0075300 AT1G29340.1 40.210 286 164 7 440 719 408 692 7.61e-38 151
Msa0075300 AT1G29340.1 27.189 434 255 16 242 630 306 723 3.17e-20 96.3
Msa0075300 AT3G07360.5 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.3 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.9 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.6 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.2 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.8 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.10 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.7 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.4 36.749 283 166 8 441 713 37 316 1.25e-37 143
Msa0075300 AT3G07360.1 36.749 283 166 8 441 713 172 451 1.04e-36 144
Msa0075300 AT3G07360.1 27.385 325 210 9 210 526 39 345 7.66e-25 108
Msa0075300 AT1G67530.2 35.000 280 169 7 448 717 434 710 1.42e-32 135
Msa0075300 AT1G67530.2 59.722 72 29 0 242 313 273 344 3.12e-23 105
Msa0075300 AT1G67530.1 35.000 280 169 7 448 717 434 710 1.42e-32 135
Msa0075300 AT1G67530.1 59.722 72 29 0 242 313 273 344 3.12e-23 105
Msa0075300 AT1G67530.4 35.000 280 169 7 448 717 434 710 1.42e-32 135
Msa0075300 AT1G67530.4 59.722 72 29 0 242 313 273 344 3.12e-23 105
Msa0075300 AT4G12710.1 35.816 282 169 7 443 713 50 330 6.12e-31 126
Msa0075300 AT5G62560.1 33.852 257 164 3 462 713 258 513 1.55e-28 121
Msa0075300 AT3G03440.1 30.742 283 186 5 440 714 66 346 1.81e-28 119
Msa0075300 AT5G40140.1 29.749 279 191 3 443 717 233 510 3.85e-28 120
Msa0075300 AT5G65200.1 31.321 265 170 4 462 715 248 511 2.02e-26 114
Msa0075300 AT4G31890.3 31.365 271 172 8 455 713 160 428 1.63e-25 111
Msa0075300 AT4G31890.2 31.365 271 172 8 455 713 160 428 1.63e-25 111
Msa0075300 AT4G31890.1 31.365 271 172 8 455 713 160 428 1.63e-25 111
Msa0075300 AT3G47820.1 33.333 282 175 6 445 714 208 488 2.77e-24 108
Msa0075300 AT4G21350.1 36.364 242 149 3 448 687 104 342 4.60e-24 105
Msa0075300 AT4G21350.1 47.887 71 36 1 238 307 2 72 7.74e-16 80.5
Msa0075300 AT1G67530.3 59.722 72 29 0 242 313 273 344 1.98e-23 105
Msa0075300 AT2G25130.1 30.337 267 169 8 461 713 132 395 2.10e-23 104
Msa0075300 AT5G01830.1 26.633 398 223 10 237 589 270 643 3.72e-23 105
Msa0075300 AT5G01830.1 30.921 304 173 10 436 722 368 651 7.56e-21 98.2
Msa0075300 AT5G14510.1 34.025 241 146 8 484 714 43 280 6.94e-23 100
Msa0075300 AT5G18320.1 33.333 276 170 7 451 713 173 447 4.65e-22 100
Msa0075300 AT5G18320.1 26.648 364 205 10 213 575 45 347 2.75e-20 95.1
Msa0075300 AT1G49780.1 49.351 77 39 0 238 314 11 87 1.91e-20 95.1
Msa0075300 AT3G19380.1 51.282 78 37 1 238 314 11 88 2.58e-19 91.7
Msa0075300 AT2G35930.1 51.389 72 34 1 241 311 12 83 2.31e-18 88.6
Msa0075300 AT1G66160.1 50.000 70 35 0 239 308 31 100 2.57e-18 88.6
Msa0075300 AT5G37490.1 44.872 78 43 0 236 313 26 103 9.84e-18 87.0
Msa0075300 AT1G10560.1 25.797 345 210 12 247 573 294 610 1.05e-17 88.2
Msa0075300 AT1G10560.1 29.352 293 188 8 443 720 393 681 2.06e-17 87.0
Msa0075300 AT3G52450.1 50.000 72 35 1 241 311 7 78 1.17e-17 86.7
Msa0075300 AT1G60190.1 26.549 339 219 11 245 573 282 600 1.31e-17 87.8
Msa0075300 AT1G60190.1 30.588 255 155 9 432 671 372 619 6.24e-17 85.5
Msa0075300 AT1G08315.1 26.460 291 192 7 440 709 9 298 1.35e-17 85.1
Msa0075300 AT5G18340.1 35.507 138 82 3 184 317 15 149 6.84e-17 84.3
Msa0075300 AT5G64660.1 46.377 69 37 0 239 307 8 76 1.93e-16 82.8
Msa0075300 AT5G09800.1 41.975 81 45 1 240 320 10 88 5.94e-16 81.3
Msa0075300 AT3G49810.1 26.525 377 195 12 241 548 64 427 7.91e-16 81.3
Msa0075300 AT3G18710.1 42.254 71 41 0 239 309 10 80 1.60e-15 80.1
Msa0075300 AT4G36550.1 42.667 75 43 0 240 314 218 292 2.38e-15 80.5
Msa0075300 AT2G44900.1 27.797 295 158 8 476 716 475 768 2.49e-15 80.9
Msa0075300 AT2G44900.1 31.792 173 114 2 469 638 599 770 7.52e-14 75.9
Msa0075300 AT2G44900.1 31.771 192 118 3 480 659 390 580 1.28e-12 72.0
Msa0075300 AT2G44900.2 27.797 295 158 8 476 716 475 768 2.49e-15 80.9
Msa0075300 AT2G44900.2 31.792 173 114 2 469 638 599 770 7.52e-14 75.9
Msa0075300 AT2G44900.2 31.771 192 118 3 480 659 390 580 1.28e-12 72.0
Msa0075300 AT5G18330.1 36.697 109 67 2 212 320 37 143 2.63e-15 79.3
Msa0075300 AT1G01660.2 40.476 84 42 1 237 312 486 569 2.87e-15 80.1
Msa0075300 AT1G01660.1 40.476 84 42 1 237 312 485 568 2.94e-15 80.1
Msa0075300 AT5G65920.1 25.926 324 193 8 241 555 60 345 4.05e-15 79.0
Msa0075300 AT5G65920.2 25.926 324 193 8 241 555 60 345 4.05e-15 79.0
Msa0075300 AT3G11840.1 47.368 76 38 2 239 313 8 82 7.91e-15 78.2
Msa0075300 AT1G01680.1 44.776 67 37 0 245 311 237 303 1.52e-14 75.5
Msa0075300 AT2G45920.1 27.746 173 119 3 147 315 229 399 6.59e-14 74.7
Msa0075300 AT3G60350.1 33.333 171 109 3 472 638 592 761 3.15e-13 73.9
Msa0075300 AT3G60350.1 29.268 246 161 5 476 709 466 710 1.43e-12 72.0
Msa0075300 AT3G60350.1 32.331 266 160 8 462 709 362 625 3.10e-12 70.9
Msa0075300 AT3G60350.2 33.333 171 109 3 472 638 592 761 3.15e-13 73.9
Msa0075300 AT3G60350.2 29.268 246 161 5 476 709 466 710 1.43e-12 72.0
Msa0075300 AT3G60350.2 32.331 266 160 8 462 709 362 625 3.10e-12 70.9
Msa0075300 AT3G61390.4 30.114 176 98 6 138 307 188 344 4.65e-13 71.6
Msa0075300 AT3G61390.2 30.114 176 98 6 138 307 263 419 6.49e-13 72.0
Msa0075300 AT2G45910.2 41.429 70 41 0 242 311 764 833 1.03e-12 72.4
Msa0075300 AT2G45910.1 41.429 70 41 0 242 311 764 833 1.03e-12 72.4
Msa0075300 AT5G57035.1 42.424 66 38 0 242 307 709 774 1.64e-12 71.6
Msa0075300 AT2G27430.1 26.280 293 188 5 440 716 79 359 1.66e-11 67.4
Msa0075300 AT1G01670.3 38.571 70 43 0 242 311 211 280 3.59e-11 65.1
Msa0075300 AT2G22125.1 39.806 103 61 1 622 723 513 615 3.67e-11 67.4
Msa0075300 AT1G01670.2 38.571 70 43 0 242 311 295 364 4.01e-11 65.9
Msa0075300 AT1G01670.1 38.571 70 43 0 242 311 295 364 4.01e-11 65.9
Msa0075300 AT1G01830.1 27.551 294 201 7 431 717 203 491 4.36e-11 66.6
Msa0075300 AT1G01830.3 27.551 294 201 7 431 717 203 491 4.36e-11 66.6
Msa0075300 AT1G01830.2 27.551 294 201 7 431 717 203 491 4.36e-11 66.6
Msa0075300 AT5G51270.2 30.168 179 100 8 142 311 642 804 4.83e-11 66.6
Msa0075300 AT5G51270.1 30.168 179 100 8 142 311 642 804 4.83e-11 66.6

Find 197 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTAAATCACTCTATTT+TGG 0.115540 1_2:-50466389 Msa0075300:five_prime_UTR
CATAGCTTTGACAGTATAAT+TGG 0.135710 1_2:+50463382 None:intergenic
AGCTGGAGCTGTCAAATTTC+TGG 0.138706 1_2:-50462466 Msa0075300:CDS
CCTCCTGATTCTATAGATTT+AGG 0.142927 1_2:-50461376 Msa0075300:three_prime_UTR
AAACTTTCACTCATTCTTTA+TGG 0.144726 1_2:-50466366 Msa0075300:five_prime_UTR
GCCCATGATCAAGCCACTTT+TGG 0.245094 1_2:+50463456 None:intergenic
CCATATTATTGCAGATCTTC+TGG 0.260798 1_2:+50464675 None:intergenic
AAATTAAATAAAGGGTTATT+AGG 0.265992 1_2:+50466571 None:intergenic
ACTGCATTTGGGATTGGATT+AGG 0.281089 1_2:+50466705 None:intergenic
GATGCGGGAGGGATAGAAAA+TGG 0.285226 1_2:-50463071 Msa0075300:CDS
CAAATTTCTGGTTGAGTTAA+CGG 0.291686 1_2:-50462454 Msa0075300:CDS
TCACTTCAATTGATTCGTTT+TGG 0.293615 1_2:+50462928 None:intergenic
ACCACCATCTGCATCGGTTT+TGG 0.297018 1_2:-50464332 Msa0075300:CDS
GCCCTCTTGTTTGTAGTTGT+TGG 0.304502 1_2:-50466517 Msa0075300:five_prime_UTR
TGTCTTTAAAACATGGATAA+GGG 0.305967 1_2:+50462695 None:intergenic
CTGTGAATCTTGCTCATCTT+TGG 0.314982 1_2:+50464512 None:intergenic
GTAAGTCTTTGACGAGTCTT+TGG 0.320289 1_2:+50463422 None:intergenic
CTTGCCTCAGGAACACTTAG+AGG 0.322163 1_2:-50462558 Msa0075300:CDS
TTAGTTGAAATTGTTGAATC+AGG 0.322937 1_2:-50462327 Msa0075300:CDS
CTGCATTTGGGATTGGATTA+GGG 0.326683 1_2:+50466706 None:intergenic
TATATGTATATGTAGCATTA+TGG 0.327351 1_2:-50466599 Msa0075300:five_prime_UTR
AGACAACAAGGCCTTGATTA+TGG 0.328758 1_2:-50462736 Msa0075300:CDS
TCACTTCTGCTGTGAATATA+TGG 0.333005 1_2:+50463197 None:intergenic
CCAGAAGATCTGCAATAATA+TGG 0.335837 1_2:-50464675 Msa0075300:CDS
AGGGCATAGGTTTCACTGTT+TGG 0.338516 1_2:+50464699 None:intergenic
TATTGAATGAAGACTGCATT+TGG 0.339616 1_2:+50466693 None:intergenic
AAAGCTCCATGAACAATATA+AGG 0.342283 1_2:+50461067 None:intergenic
GAATATAGCAGCGAAATTAA+AGG 0.345847 1_2:+50462819 None:intergenic
CTTTCGTTGTCCTTTATCAT+TGG 0.349699 1_2:-50463537 Msa0075300:CDS
CTGTCTTTAAAACATGGATA+AGG 0.350895 1_2:+50462694 None:intergenic
TAATGCTACATATACATATA+TGG 0.361950 1_2:+50466602 None:intergenic
CCTCTTCTTTCCTTTCTCTC+AGG 0.364453 1_2:-50466492 Msa0075300:five_prime_UTR
TCTTGAGACACTGAAGTTCC+TGG 0.377501 1_2:+50463852 None:intergenic
AATTATGCCTACATAGTTCC+AGG 0.379327 1_2:-50462263 Msa0075300:CDS
TGCAGATGGTGGTGACTCTA+AGG 0.382186 1_2:+50464342 None:intergenic
TGACCGGAAGCCACAATAAC+AGG 0.383755 1_2:+50463500 None:intergenic
GCCAGTACTCGACGATGTTA+TGG 0.384564 1_2:-50464630 Msa0075300:CDS
ATGTAAAGTATGTGAAGAAT+TGG 0.384663 1_2:-50464579 Msa0075300:CDS
AGTAACTCTGAGCATAATAC+TGG 0.389481 1_2:-50463320 Msa0075300:CDS
AACATGAGTTCCAATGATAA+AGG 0.394131 1_2:+50463527 None:intergenic
TTTCTGTGTTATGCTTTGTA+AGG 0.397583 1_2:+50462877 None:intergenic
GATCCTGTTATTGTGGCTTC+CGG 0.400104 1_2:-50463503 Msa0075300:CDS
TTTATGGTTTGAAGTTGATC+AGG 0.406084 1_2:-50466350 Msa0075300:five_prime_UTR
TTAGTTGCATTATCTCAATC+TGG 0.415822 1_2:-50462201 Msa0075300:CDS
AATGCATTTGAAGAACAAAA+AGG 0.418610 1_2:-50463296 Msa0075300:CDS
ACTAGAAATTGAACTTGAAA+AGG 0.419589 1_2:+50463172 None:intergenic
AGTTTCACAACCATGCATAT+AGG 0.419904 1_2:-50466302 Msa0075300:intron
ACTGAACTGACTTGGGAGTT+GGG 0.420206 1_2:+50461144 None:intergenic
AATCCTAAATCTATAGAATC+AGG 0.421902 1_2:+50461373 None:intergenic
AGATCTGCAATAATATGGTT+GGG 0.424411 1_2:-50464670 Msa0075300:CDS
ACAGAAAACCGTATCATTGT+AGG 0.429397 1_2:-50462861 Msa0075300:CDS
TTCTATCCCTCCCGCATCTA+CGG 0.431968 1_2:+50463076 None:intergenic
ATCATGAAGATAGAAAGTTT+TGG 0.433620 1_2:-50461450 Msa0075300:exon
ATCCAAAAGTGGCTTGATCA+TGG 0.434849 1_2:-50463458 Msa0075300:CDS
CATTTCCTGTCTTTAAAACA+TGG 0.435893 1_2:+50462688 None:intergenic
TCTACTTTGGTGGCTGTACT+CGG 0.438981 1_2:-50461251 Msa0075300:three_prime_UTR
ATTGAATGAAGACTGCATTT+GGG 0.447488 1_2:+50466694 None:intergenic
AGAGACTATTGCTGTGGAAA+AGG 0.448997 1_2:-50463702 Msa0075300:CDS
GCATCCATTGCATTCTCCAT+TGG 0.451047 1_2:+50463256 None:intergenic
CACTGAACTGACTTGGGAGT+TGG 0.454317 1_2:+50461143 None:intergenic
CTACTAGAGCATAACTCATA+TGG 0.456974 1_2:-50461170 Msa0075300:three_prime_UTR
TACATGTATCATTCTGGAAA+CGG 0.460305 1_2:-50461316 Msa0075300:three_prime_UTR
TTTATCATTGGAACTCATGT+TGG 0.461750 1_2:-50463525 Msa0075300:CDS
TTCCCTCCGCAATTGTCGAC+AGG 0.465435 1_2:+50462385 None:intergenic
AAAGATGTATCAAGGGTGTC+TGG 0.466382 1_2:-50463125 Msa0075300:CDS
ATGAAGACTGCATTTGGGAT+TGG 0.467960 1_2:+50466699 None:intergenic
ATGCGGGAGGGATAGAAAAT+GGG 0.468697 1_2:-50463070 Msa0075300:CDS
CGCCAATGCTTTAATTGCAC+CGG 0.469718 1_2:+50462587 None:intergenic
AGATTGAGATAATGCAACTA+AGG 0.474539 1_2:+50462203 None:intergenic
TTCACATCTTGTTTCAAACT+CGG 0.478265 1_2:-50463003 Msa0075300:CDS
CCGTTTCAAAAGATGTATCA+AGG 0.481355 1_2:-50463133 Msa0075300:CDS
TCCATAACATCGTCGAGTAC+TGG 0.483296 1_2:+50464629 None:intergenic
TGCAGTCTTCATTCAATACT+AGG 0.484790 1_2:-50466688 Msa0075300:five_prime_UTR
TTGGCGGAACTTCTTGCCTC+AGG 0.485196 1_2:-50462570 Msa0075300:CDS
TCTGTAAAAGCCTGAGAGAA+AGG 0.486938 1_2:+50466482 None:intergenic
CTGAACTGACTTGGGAGTTG+GGG 0.490901 1_2:+50461145 None:intergenic
AGCAATGGTCTATATAGAAA+AGG 0.491210 1_2:-50463822 Msa0075300:CDS
ATAGCTTTGACAGTATAATT+GGG 0.493767 1_2:+50463383 None:intergenic
GAGTACTTTGCAGTCAAAAG+TGG 0.495169 1_2:-50463578 Msa0075300:CDS
TTCCGGTGCAATTAAAGCAT+TGG 0.495853 1_2:-50462589 Msa0075300:CDS
CAGATCTTCTGGAAGGGCAT+AGG 0.495873 1_2:+50464686 None:intergenic
TAAATAAAGGGTTATTAGGT+GGG 0.497122 1_2:+50466575 None:intergenic
TCTATTCAGCCTCTCTGTAA+TGG 0.503208 1_2:-50462637 Msa0075300:CDS
TCACATCTTGTTTCAAACTC+GGG 0.504312 1_2:-50463002 Msa0075300:CDS
AAGATCTGCAATAATATGGT+TGG 0.507887 1_2:-50464671 Msa0075300:CDS
CGGTGCAATTAAAGCATTGG+CGG 0.507977 1_2:-50462586 Msa0075300:CDS
TTAAATAAAGGGTTATTAGG+TGG 0.510389 1_2:+50466574 None:intergenic
TCAACAATTTCAACTAATGA+CGG 0.515732 1_2:+50462333 None:intergenic
TTGTCTCTCGTATGTTTGAC+CGG 0.516665 1_2:+50463484 None:intergenic
TTTCACTTAAACAGGTCAAA+CGG 0.517237 1_2:-50464783 Msa0075300:intron
TTGTCAACCATTCCATCGGC+AGG 0.519613 1_2:+50462429 None:intergenic
AGGAACACTTAGAGGAAAGA+AGG 0.519961 1_2:-50462550 Msa0075300:CDS
TACTCCAAGAGCAAAGGAAA+AGG 0.525058 1_2:-50462178 Msa0075300:intron
CAACAATTTCAACTAATGAC+GGG 0.525187 1_2:+50462334 None:intergenic
GAAGCAGCTACTACCACAAA+GGG 0.525301 1_2:-50461476 Msa0075300:CDS
CAAGGCCTTGATTATGGAAG+CGG 0.526592 1_2:-50462730 Msa0075300:CDS
AACGGATCCTGCCGATGGAA+TGG 0.527206 1_2:-50462436 Msa0075300:CDS
TTTCGCTGCTATATTCAGAC+GGG 0.527949 1_2:-50462812 Msa0075300:CDS
TCCAAAAGTGGCTTGATCAT+GGG 0.528426 1_2:-50463457 Msa0075300:CDS
AAGGCCTTGATTATGGAAGC+GGG 0.532774 1_2:-50462729 Msa0075300:CDS
ATATATGCACTGAACTGACT+TGG 0.533823 1_2:+50461136 None:intergenic
GATAAAGGACAACGAAAGTA+CGG 0.534573 1_2:+50463542 None:intergenic
TGTCGACAGGTTTGACAGAA+CGG 0.535793 1_2:+50462398 None:intergenic
AGAATATAGAAATAGAAAAG+TGG 0.536189 1_2:-50463232 Msa0075300:CDS
CATGTTGGATCCTGTTATTG+TGG 0.537393 1_2:-50463510 Msa0075300:CDS
TAAAACCAGTGTACAAAACC+TGG 0.538109 1_2:+50462245 None:intergenic
ATGAAATGAAGTGAAGAATG+AGG 0.538292 1_2:-50466440 Msa0075300:five_prime_UTR
ATCATTATAGAAAATTACTT+AGG 0.540893 1_2:+50461402 None:intergenic
CGTATCATTGTAGGGCAGTG+TGG 0.543384 1_2:-50462852 Msa0075300:CDS
ACATAAAATGAAAAGCGACT+TGG 0.550069 1_2:-50463660 Msa0075300:CDS
GTATCATTGTAGGGCAGTGT+GGG 0.550685 1_2:-50462851 Msa0075300:CDS
AGCTGCCGCAGAATTCTCCT+TGG 0.550863 1_2:+50462659 None:intergenic
CTCAGAGTTACTAGAACGGT+TGG 0.551734 1_2:+50463331 None:intergenic
ACCTTGCAAGGAAAATCTAA+AGG 0.552613 1_2:-50463771 Msa0075300:CDS
GTCTTTAAAACATGGATAAG+GGG 0.554803 1_2:+50462696 None:intergenic
AAGGTGTCGTCCGTAGATGC+GGG 0.555598 1_2:-50463086 Msa0075300:CDS
CACACTGCCCTACAATGATA+CGG 0.556153 1_2:+50462853 None:intergenic
ATTTCGCTGCTATATTCAGA+CGG 0.556954 1_2:-50462813 Msa0075300:CDS
AGATGATACTGAACCTTGCA+AGG 0.558284 1_2:-50463783 Msa0075300:CDS
AAAGCTCGAATAGTTCAAGC+TGG 0.558721 1_2:-50462483 Msa0075300:CDS
TACAAAACCTGGAACTATGT+AGG 0.558754 1_2:+50462256 None:intergenic
AGAGACAATCCATCCAAAAG+TGG 0.560254 1_2:-50463469 Msa0075300:CDS
TTGGTGGCTGTACTCGGAGG+AGG 0.562505 1_2:-50461245 Msa0075300:three_prime_UTR
AAATTACTTAGGCTAGGAGA+AGG 0.563697 1_2:+50461413 None:intergenic
TGTTGAATCAGGTTCTCAGA+GGG 0.564013 1_2:-50462316 Msa0075300:CDS
CTTTCCTCTAAGTGTTCCTG+AGG 0.564605 1_2:+50462554 None:intergenic
GAATATAGAAATAGAAAAGT+GGG 0.566712 1_2:-50463231 Msa0075300:CDS
GAAGGTGTCGTCCGTAGATG+CGG 0.567749 1_2:-50463087 Msa0075300:CDS
TAGTTTCTGAAGCTTTAGCT+TGG 0.570792 1_2:-50461217 Msa0075300:three_prime_UTR
TATAGAAAATTACTTAGGCT+AGG 0.570990 1_2:+50461407 None:intergenic
GGCCTTGATTATGGAAGCGG+GGG 0.573918 1_2:-50462727 Msa0075300:CDS
CAGAAAACCGTATCATTGTA+GGG 0.574472 1_2:-50462860 Msa0075300:CDS
GACAGGAAATGATGGTGCCA+AGG 0.574539 1_2:-50462676 Msa0075300:CDS
TATTCTCATGAAATATTGAG+AGG 0.577297 1_2:+50462505 None:intergenic
AAGGAAAGATTGAACGCTGA+AGG 0.579752 1_2:-50463683 Msa0075300:CDS
TATATGCACTGAACTGACTT+GGG 0.580003 1_2:+50461137 None:intergenic
ATGCTTTAATTGCACCGGAA+CGG 0.580585 1_2:+50462592 None:intergenic
CAATACTAGGCATCTCATAA+CGG 0.583764 1_2:-50466675 Msa0075300:five_prime_UTR
AGGTTAGAAATTGCAAGAGA+AGG 0.585061 1_2:-50462363 Msa0075300:CDS
GATCTGCAATAATATGGTTG+GGG 0.585533 1_2:-50464669 Msa0075300:CDS
GTCAAACCTGTCGACAATTG+CGG 0.586932 1_2:-50462391 Msa0075300:CDS
ATCTGGTACTCCAAGAGCAA+AGG 0.587517 1_2:-50462184 Msa0075300:CDS
ATTATTGCAGATCTTCTGGA+AGG 0.589284 1_2:+50464679 None:intergenic
AGAGTCACCACCATCTGCAT+CGG 0.589320 1_2:-50464338 Msa0075300:CDS
AGCCTCTCTGTAATGGAGAA+CGG 0.590485 1_2:-50462630 Msa0075300:CDS
AGATCCAATGGAGAATGCAA+TGG 0.591622 1_2:-50463260 Msa0075300:CDS
ACTTAAATTGACATCAACTC+AGG 0.593345 1_2:-50463735 Msa0075300:CDS
AATTAAAAGAATGAAATGAA+AGG 0.593597 1_2:+50461342 None:intergenic
AGCCTTGTCAACCATTCCAT+CGG 0.599214 1_2:+50462425 None:intergenic
TTAGAAATTGCAAGAGAAGG+TGG 0.599313 1_2:-50462360 Msa0075300:CDS
GGAACTTCAGTGTCTCAAGA+AGG 0.599469 1_2:-50463849 Msa0075300:CDS
ATCAGGTTCTCAGAGGGGAA+AGG 0.606091 1_2:-50462310 Msa0075300:CDS
AATTACTTAGGCTAGGAGAA+GGG 0.608524 1_2:+50461414 None:intergenic
GAGTTAACGGATCCTGCCGA+TGG 0.609363 1_2:-50462441 Msa0075300:CDS
CTGAGAGAAAGGAAAGAAGA+GGG 0.609919 1_2:+50466493 None:intergenic
TGTCGACAATTGCGGAGGGA+AGG 0.610973 1_2:-50462383 Msa0075300:CDS
GATATCTCTTTCAGATCCAA+TGG 0.611138 1_2:-50463272 Msa0075300:CDS
GATTGAGATAATGCAACTAA+GGG 0.611793 1_2:+50462204 None:intergenic
CTTGAAAGAGACTATTGCTG+TGG 0.614279 1_2:-50463708 Msa0075300:CDS
TTATTGCAGATCTTCTGGAA+GGG 0.616400 1_2:+50464680 None:intergenic
TCAAAGCTATGATAGCAACT+TGG 0.617844 1_2:-50463370 Msa0075300:CDS
ATCAATTAATGAAGACAACA+AGG 0.618009 1_2:-50462748 Msa0075300:CDS
CCTGAGAGAAAGGAAAGAAG+AGG 0.618981 1_2:+50466492 None:intergenic
CGTTTCAAAAGATGTATCAA+GGG 0.621464 1_2:-50463132 Msa0075300:CDS
ATATGCGTGTTAACGAAGCA+AGG 0.624151 1_2:-50464556 Msa0075300:CDS
GTCCAACAACTACAAACAAG+AGG 0.624311 1_2:+50466515 None:intergenic
TTAGCCAAAACCGATGCAGA+TGG 0.627265 1_2:+50464328 None:intergenic
TGAACTGACTTGGGAGTTGG+GGG 0.627771 1_2:+50461146 None:intergenic
CAATTTATTGACATGAGACG+AGG 0.630618 1_2:+50462962 None:intergenic
TATGATAGCAACTTGGTGTG+AGG 0.634224 1_2:-50463363 Msa0075300:CDS
GTGTCGTCCGTAGATGCGGG+AGG 0.637385 1_2:-50463083 Msa0075300:CDS
GCCAAAACCGATGCAGATGG+TGG 0.638983 1_2:+50464331 None:intergenic
AAACCTGTCGACAATTGCGG+AGG 0.639239 1_2:-50462388 Msa0075300:CDS
TGAGATAATGCAACTAAGGG+AGG 0.643063 1_2:+50462207 None:intergenic
TATGCGTGTTAACGAAGCAA+GGG 0.643177 1_2:-50464555 Msa0075300:CDS
TCTCAAGAAGGAAACAGCAA+TGG 0.643563 1_2:-50463837 Msa0075300:CDS
AGGCCTTGATTATGGAAGCG+GGG 0.646219 1_2:-50462728 Msa0075300:CDS
AACCTGTCGACAATTGCGGA+GGG 0.649763 1_2:-50462387 Msa0075300:CDS
TATCATTGTAGGGCAGTGTG+GGG 0.649782 1_2:-50462850 Msa0075300:CDS
CCTAAATCTATAGAATCAGG+AGG 0.654143 1_2:+50461376 None:intergenic
GGAAGCAGCTACTACCACAA+AGG 0.655836 1_2:-50461477 Msa0075300:CDS
TTTATTGACATGAGACGAGG+TGG 0.656546 1_2:+50462965 None:intergenic
TACCGTTCTCCATTACAGAG+AGG 0.659126 1_2:+50462628 None:intergenic
TGTCGTCCGTAGATGCGGGA+GGG 0.663917 1_2:-50463082 Msa0075300:CDS
TCCAACAACTACAAACAAGA+GGG 0.664710 1_2:+50466516 None:intergenic
TTGTTGAATCAGGTTCTCAG+AGG 0.664892 1_2:-50462317 Msa0075300:CDS
AAGGACAACGAAAGTACGGA+GGG 0.665746 1_2:+50463546 None:intergenic
GTTGAATCAGGTTCTCAGAG+GGG 0.666113 1_2:-50462315 Msa0075300:CDS
CTACTGCTGCAGAAGAACTG+AGG 0.670399 1_2:-50462902 Msa0075300:CDS
ACTTTGGTGGCTGTACTCGG+AGG 0.672026 1_2:-50461248 Msa0075300:three_prime_UTR
GAGGTTATATAAAGCAGTAG+CGG 0.675036 1_2:+50462524 None:intergenic
TATGCTCAGAGTTACTAGAA+CGG 0.677978 1_2:+50463327 None:intergenic
TGCCGATGGAATGGTTGACA+AGG 0.680641 1_2:-50462427 Msa0075300:CDS
AAAGGACAACGAAAGTACGG+AGG 0.702184 1_2:+50463545 None:intergenic
TGGTGCCAAGGAGAATTCTG+CGG 0.713773 1_2:-50462664 Msa0075300:CDS
TCACATAATCACGTAAGACG+CGG 0.714629 1_2:+50463609 None:intergenic
TGGTAAGTATCAAATTACGA+AGG 0.715980 1_2:-50463105 Msa0075300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAATTAAATAAA+GGG + chr1_2:50461260-50461279 None:intergenic 0.0%
!! AAAAATAAAAAATTAAATAA+AGG + chr1_2:50461261-50461280 None:intergenic 0.0%
!! AAATTAAATAAAGGGTTATT+AGG + chr1_2:50461252-50461271 None:intergenic 15.0%
!!! TTTTGTTTTTGCTTAAAAAA+TGG - chr1_2:50461579-50461598 Msa0075300:intron 15.0%
!! TAAATCAAAAACAAAAAACA+TGG + chr1_2:50461630-50461649 None:intergenic 15.0%
!!! GTTTTTTGTTTTTGATTTAT+AGG - chr1_2:50461631-50461650 Msa0075300:intron 15.0%
!! AAGTAGTAAAAAAATATTAG+TGG + chr1_2:50461979-50461998 None:intergenic 15.0%
!!! TTTTATATGTCATTTTCATT+GGG - chr1_2:50462040-50462059 Msa0075300:intron 15.0%
!! GTTATAAAAAATCAAACAAA+GGG + chr1_2:50462150-50462169 None:intergenic 15.0%
!! TTAAAAAATGAGTTTATATG+TGG - chr1_2:50462602-50462621 Msa0075300:CDS 15.0%
!! TAAAAAATGAGTTTATATGT+GGG - chr1_2:50462603-50462622 Msa0075300:CDS 15.0%
!! GAATTATTGTAAATGAATAT+AGG - chr1_2:50462920-50462939 Msa0075300:CDS 15.0%
!!! TTACATAAATTTTGATGTAA+AGG + chr1_2:50463227-50463246 None:intergenic 15.0%
!! TTCTTTCTTAAAATATGAAT+TGG + chr1_2:50466014-50466033 None:intergenic 15.0%
!!! ATTTTAAGAAAGAAAAACAA+AGG - chr1_2:50466020-50466039 Msa0075300:intron 15.0%
!!! TTTTAAGAAAGAAAAACAAA+GGG - chr1_2:50466021-50466040 Msa0075300:intron 15.0%
!! ATCATTATAGAAAATTACTT+AGG + chr1_2:50466421-50466440 None:intergenic 15.0%
!! AATTAAAAGAATGAAATGAA+AGG + chr1_2:50466481-50466500 None:intergenic 15.0%
!! TAATGCTACATATACATATA+TGG + chr1_2:50461221-50461240 None:intergenic 20.0%
!! TATATGTATATGTAGCATTA+TGG - chr1_2:50461221-50461240 Msa0075300:three_prime_UTR 20.0%
!!! ATTCTTAAATCACTCTATTT+TGG - chr1_2:50461431-50461450 Msa0075300:three_prime_UTR 20.0%
!!! TTTTGTTTTTGATTTATAGG+TGG - chr1_2:50461634-50461653 Msa0075300:intron 20.0%
!!! CAGATTTTAAGTATAAATGA+TGG + chr1_2:50461676-50461695 None:intergenic 20.0%
!!! TTAAAATCTGAACTTTTTGT+TGG - chr1_2:50461686-50461705 Msa0075300:intron 20.0%
!!! TAAAATCTGAACTTTTTGTT+GGG - chr1_2:50461687-50461706 Msa0075300:intron 20.0%
!!! AACTTATACATTTACCATTT+TGG - chr1_2:50461826-50461845 Msa0075300:intron 20.0%
!!! TTGAATTATGTTGATTTAAG+TGG - chr1_2:50461938-50461957 Msa0075300:intron 20.0%
!!! GTTTTATATGTCATTTTCAT+TGG - chr1_2:50462039-50462058 Msa0075300:intron 20.0%
!!! TTTATATGTCATTTTCATTG+GGG - chr1_2:50462041-50462060 Msa0075300:intron 20.0%
!! GGTTATAAAAAATCAAACAA+AGG + chr1_2:50462151-50462170 None:intergenic 20.0%
!! TCTTAATATGTGTTTATAAG+TGG - chr1_2:50462214-50462233 Msa0075300:CDS 20.0%
!! CTTAATATGTGTTTATAAGT+GGG - chr1_2:50462215-50462234 Msa0075300:CDS 20.0%
!! AATGAATATAGGACTAAATA+AGG - chr1_2:50462931-50462950 Msa0075300:CDS 20.0%
!! CAACTTGTATTTAAATACTA+TGG + chr1_2:50463635-50463654 None:intergenic 20.0%
!!! ATATCTTTATTCTTTTGAAC+TGG - chr1_2:50463779-50463798 Msa0075300:CDS 20.0%
!!! TATCTTTATTCTTTTGAACT+GGG - chr1_2:50463780-50463799 Msa0075300:CDS 20.0%
!!! ACTTTTCTATTTCTATATTC+TGG + chr1_2:50464589-50464608 None:intergenic 20.0%
!! AGAATATAGAAATAGAAAAG+TGG - chr1_2:50464588-50464607 Msa0075300:CDS 20.0%
!! GAATATAGAAATAGAAAAGT+GGG - chr1_2:50464589-50464608 Msa0075300:CDS 20.0%
!!! ATTTTTTACATGTATCATTC+TGG - chr1_2:50466498-50466517 Msa0075300:five_prime_UTR 20.0%
!!! CTTTAATTTTCTTTCTACTT+TGG - chr1_2:50466556-50466575 Msa0075300:five_prime_UTR 20.0%
! TAAATAAAGGGTTATTAGGT+GGG + chr1_2:50461248-50461267 None:intergenic 25.0%
! TTAAATAAAGGGTTATTAGG+TGG + chr1_2:50461249-50461268 None:intergenic 25.0%
! AAACTTTCACTCATTCTTTA+TGG - chr1_2:50461454-50461473 Msa0075300:exon 25.0%
!! AAATGATGGAAGAAAATGAA+TGG + chr1_2:50461662-50461681 None:intergenic 25.0%
!!! ACATTTACCATTTTGGTTTT+TGG - chr1_2:50461833-50461852 Msa0075300:intron 25.0%
!!! CATTTACCATTTTGGTTTTT+GGG - chr1_2:50461834-50461853 Msa0075300:intron 25.0%
!!! ATTTACCATTTTGGTTTTTG+GGG - chr1_2:50461835-50461854 Msa0075300:intron 25.0%
!!! TAGGAATGTTTTGTTTATTG+TGG - chr1_2:50461901-50461920 Msa0075300:intron 25.0%
! ATAAAAAATCAAACAAAGGG+TGG + chr1_2:50462147-50462166 None:intergenic 25.0%
! AAAACCAGATTGTAAAGTAA+GGG + chr1_2:50462247-50462266 None:intergenic 25.0%
! TAAAACCAGATTGTAAAGTA+AGG + chr1_2:50462248-50462267 None:intergenic 25.0%
!!! TACTTTACAATCTGGTTTTA+TGG - chr1_2:50462248-50462267 Msa0075300:CDS 25.0%
!!! ACTTTACAATCTGGTTTTAT+GGG - chr1_2:50462249-50462268 Msa0075300:CDS 25.0%
!!! TTTGGATTTTAGAATCCAAA+CGG + chr1_2:50462284-50462303 None:intergenic 25.0%
! TATCATCTTAGAATTTGCAT+TGG + chr1_2:50462360-50462379 None:intergenic 25.0%
! GCAAGATGTTCTTAAAATTT+GGG + chr1_2:50462512-50462531 None:intergenic 25.0%
! AGCAAGATGTTCTTAAAATT+TGG + chr1_2:50462513-50462532 None:intergenic 25.0%
! ATAAGTTCTTAGAATAGGTT+GGG + chr1_2:50462672-50462691 None:intergenic 25.0%
! AATAAGTTCTTAGAATAGGT+TGG + chr1_2:50462673-50462692 None:intergenic 25.0%
! GAAGAATAAGTTCTTAGAAT+AGG + chr1_2:50462677-50462696 None:intergenic 25.0%
! ATTATAAACCAAAGGTAGAT+AGG + chr1_2:50462716-50462735 None:intergenic 25.0%
! CCAATAGTATTATAAACCAA+AGG + chr1_2:50462724-50462743 None:intergenic 25.0%
!! CCTTTGGTTTATAATACTAT+TGG - chr1_2:50462721-50462740 Msa0075300:CDS 25.0%
!! ATAATGATTTTGCCATGAAT+TGG - chr1_2:50462888-50462907 Msa0075300:CDS 25.0%
! TTCAATGTAATTCCAATTCA+TGG + chr1_2:50462903-50462922 None:intergenic 25.0%
! AAGCAATATATGATTTACTG+GGG + chr1_2:50462981-50463000 None:intergenic 25.0%
! GAAGCAATATATGATTTACT+GGG + chr1_2:50462982-50463001 None:intergenic 25.0%
! TGAAGCAATATATGATTTAC+TGG + chr1_2:50462983-50463002 None:intergenic 25.0%
! ATGTAAAGTATGTGAAGAAT+TGG - chr1_2:50463241-50463260 Msa0075300:CDS 25.0%
! AAGGGATTTCATTGAAAAAT+GGG - chr1_2:50463283-50463302 Msa0075300:CDS 25.0%
! AATTGCATCCTGATAAAATT+AGG - chr1_2:50463849-50463868 Msa0075300:CDS 25.0%
!! TTTATGCTCCTAATTTTATC+AGG + chr1_2:50463860-50463879 None:intergenic 25.0%
!! ATTAGGAGCATAAAGTATTA+TGG - chr1_2:50463866-50463885 Msa0075300:intron 25.0%
!!! ATAGCTTTGACAGTATAATT+GGG + chr1_2:50464440-50464459 None:intergenic 25.0%
! AATGCATTTGAAGAACAAAA+AGG - chr1_2:50464524-50464543 Msa0075300:CDS 25.0%
! ACTAGAAATTGAACTTGAAA+AGG + chr1_2:50464651-50464670 None:intergenic 25.0%
! ATCAATTAATGAAGACAACA+AGG - chr1_2:50465072-50465091 Msa0075300:intron 25.0%
!!! TGTCTTTAAAACATGGATAA+GGG + chr1_2:50465128-50465147 None:intergenic 25.0%
! TATTCTCATGAAATATTGAG+AGG + chr1_2:50465318-50465337 None:intergenic 25.0%
! TCAACAATTTCAACTAATGA+CGG + chr1_2:50465490-50465509 None:intergenic 25.0%
! TTAGTTGAAATTGTTGAATC+AGG - chr1_2:50465493-50465512 Msa0075300:intron 25.0%
! AAGTAAAGGAATGAATTGTT+AGG + chr1_2:50466116-50466135 None:intergenic 25.0%
! TTCATTAACTGAGATACTAT+TGG + chr1_2:50466234-50466253 None:intergenic 25.0%
!! ATCATGAAGATAGAAAGTTT+TGG - chr1_2:50466370-50466389 Msa0075300:five_prime_UTR 25.0%
! TATAGAAAATTACTTAGGCT+AGG + chr1_2:50466416-50466435 None:intergenic 25.0%
! AATCCTAAATCTATAGAATC+AGG + chr1_2:50466450-50466469 None:intergenic 25.0%
!! TAATTTTCTTTCTACTTTGG+TGG - chr1_2:50466559-50466578 Msa0075300:five_prime_UTR 25.0%
ATTGAATGAAGACTGCATTT+GGG + chr1_2:50461129-50461148 None:intergenic 30.0%
TATTGAATGAAGACTGCATT+TGG + chr1_2:50461130-50461149 None:intergenic 30.0%
ATGAAATGAAGTGAAGAATG+AGG - chr1_2:50461380-50461399 Msa0075300:three_prime_UTR 30.0%
! TTTATGGTTTGAAGTTGATC+AGG - chr1_2:50461470-50461489 Msa0075300:CDS 30.0%
! ATTTTGCATACCTATATGCA+TGG + chr1_2:50461531-50461550 None:intergenic 30.0%
!! GTTGTTTCTGTGGAAAATTT+GGG - chr1_2:50461709-50461728 Msa0075300:intron 30.0%
ATGAAAGCTATTTGTCAAGT+TGG - chr1_2:50461755-50461774 Msa0075300:intron 30.0%
!! GTTGATTGCTATTGATTTGT+TGG - chr1_2:50461792-50461811 Msa0075300:intron 30.0%
!! TTGCTATTGATTTGTTGGAT+TGG - chr1_2:50461797-50461816 Msa0075300:intron 30.0%
AAGGGATGTTGAATTTGATT+AGG - chr1_2:50461882-50461901 Msa0075300:intron 30.0%
! ACAGAAGAAGAAAGAACTTT+TGG + chr1_2:50462007-50462026 None:intergenic 30.0%
AAAAGTTCTTTCTTCTTCTG+TGG - chr1_2:50462006-50462025 Msa0075300:intron 30.0%
ATATGTCAACACAAAAGGTA+AGG - chr1_2:50462072-50462091 Msa0075300:intron 30.0%
CTAGCACAAAATTACAAAAG+AGG + chr1_2:50462172-50462191 None:intergenic 30.0%
AATATGTGTTTATAAGTGGG+AGG - chr1_2:50462218-50462237 Msa0075300:CDS 30.0%
!!! CTTTACAATCTGGTTTTATG+GGG - chr1_2:50462250-50462269 Msa0075300:CDS 30.0%
!! TTCTAAAATCCAAACTGCAT+AGG - chr1_2:50462290-50462309 Msa0075300:CDS 30.0%
! TCTAAAATCCAAACTGCATA+GGG - chr1_2:50462291-50462310 Msa0075300:CDS 30.0%
TGGTTTAATAGAGTTGAGTA+AGG - chr1_2:50462333-50462352 Msa0075300:CDS 30.0%
AAAATGAGTTTATATGTGGG+AGG - chr1_2:50462606-50462625 Msa0075300:CDS 30.0%
!!! GTACATTTCCTTTTTAAGTG+CGG - chr1_2:50462766-50462785 Msa0075300:CDS 30.0%
TTTGAAAACCGCACTTAAAA+AGG + chr1_2:50462777-50462796 None:intergenic 30.0%
ATATATGATTTACTGGGGAA+TGG + chr1_2:50462976-50462995 None:intergenic 30.0%
TTTCACTTAAACAGGTCAAA+CGG - chr1_2:50463037-50463056 Msa0075300:CDS 30.0%
AAGATCTGCAATAATATGGT+TGG - chr1_2:50463149-50463168 Msa0075300:CDS 30.0%
AGATCTGCAATAATATGGTT+GGG - chr1_2:50463150-50463169 Msa0075300:CDS 30.0%
CAAGGGATTTCATTGAAAAA+TGG - chr1_2:50463282-50463301 Msa0075300:CDS 30.0%
AGGGATTTCATTGAAAAATG+GGG - chr1_2:50463284-50463303 Msa0075300:CDS 30.0%
AGTCAAACTAAGTATTCTGT+TGG - chr1_2:50463364-50463383 Msa0075300:CDS 30.0%
! TTGGAATCATTCCTATTTTC+AGG - chr1_2:50463383-50463402 Msa0075300:CDS 30.0%
ACTTTGTAGAACCTGAAAAT+AGG + chr1_2:50463397-50463416 None:intergenic 30.0%
!!! TATTTTCAGGTTCTACAAAG+TGG - chr1_2:50463396-50463415 Msa0075300:CDS 30.0%
TAGGGGTAATTGTTGTAATA+TGG - chr1_2:50463608-50463627 Msa0075300:CDS 30.0%
! TTATTCTTTTGAACTGGGAT+TGG - chr1_2:50463785-50463804 Msa0075300:CDS 30.0%
AGCAATGGTCTATATAGAAA+AGG - chr1_2:50463998-50464017 Msa0075300:intron 30.0%
ACTTAAATTGACATCAACTC+AGG - chr1_2:50464085-50464104 Msa0075300:intron 30.0%
ACATAAAATGAAAAGCGACT+TGG - chr1_2:50464160-50464179 Msa0075300:intron 30.0%
AACATGAGTTCCAATGATAA+AGG + chr1_2:50464296-50464315 None:intergenic 30.0%
TTTATCATTGGAACTCATGT+TGG - chr1_2:50464295-50464314 Msa0075300:intron 30.0%
!! CATAGCTTTGACAGTATAAT+TGG + chr1_2:50464441-50464460 None:intergenic 30.0%
!! CCTTGATACATCTTTTGAAA+CGG + chr1_2:50464690-50464709 None:intergenic 30.0%
CGTTTCAAAAGATGTATCAA+GGG - chr1_2:50464688-50464707 Msa0075300:CDS 30.0%
TGGTAAGTATCAAATTACGA+AGG - chr1_2:50464715-50464734 Msa0075300:CDS 30.0%
! TTCACATCTTGTTTCAAACT+CGG - chr1_2:50464817-50464836 Msa0075300:intron 30.0%
!!! TCACTTCAATTGATTCGTTT+TGG + chr1_2:50464895-50464914 None:intergenic 30.0%
TTTCTGTGTTATGCTTTGTA+AGG + chr1_2:50464946-50464965 None:intergenic 30.0%
GAATATAGCAGCGAAATTAA+AGG + chr1_2:50465004-50465023 None:intergenic 30.0%
!! GTCTTTAAAACATGGATAAG+GGG + chr1_2:50465127-50465146 None:intergenic 30.0%
!! CTGTCTTTAAAACATGGATA+AGG + chr1_2:50465129-50465148 None:intergenic 30.0%
!!! CTTATCCATGTTTTAAAGAC+AGG - chr1_2:50465127-50465146 Msa0075300:intron 30.0%
!! CATTTCCTGTCTTTAAAACA+TGG + chr1_2:50465135-50465154 None:intergenic 30.0%
!!! GTTTTAAAGACAGGAAATGA+TGG - chr1_2:50465136-50465155 Msa0075300:intron 30.0%
!! CAAATTTCTGGTTGAGTTAA+CGG - chr1_2:50465366-50465385 Msa0075300:intron 30.0%
CAACAATTTCAACTAATGAC+GGG + chr1_2:50465489-50465508 None:intergenic 30.0%
GATTGAGATAATGCAACTAA+GGG + chr1_2:50465619-50465638 None:intergenic 30.0%
AGATTGAGATAATGCAACTA+AGG + chr1_2:50465620-50465639 None:intergenic 30.0%
TTAGTTGCATTATCTCAATC+TGG - chr1_2:50465619-50465638 Msa0075300:intron 30.0%
TAATTGAATGTTACCACATG+TGG - chr1_2:50465829-50465848 Msa0075300:intron 30.0%
! CCACTTATAAACTCATTTTC+GGG + chr1_2:50465944-50465963 None:intergenic 30.0%
! CCCACTTATAAACTCATTTT+CGG + chr1_2:50465945-50465964 None:intergenic 30.0%
CCGAAAATGAGTTTATAAGT+GGG - chr1_2:50465942-50465961 Msa0075300:intron 30.0%
AAAATGAGTTTATAAGTGGG+AGG - chr1_2:50465945-50465964 Msa0075300:intron 30.0%
!!! ACCTAAAAAACTGGTTTTGT+AGG - chr1_2:50465976-50465995 Msa0075300:intron 30.0%
!!! CCTAAAAAACTGGTTTTGTA+GGG - chr1_2:50465977-50465996 Msa0075300:intron 30.0%
AATGACTTCACTAGTAGTAT+AGG + chr1_2:50466055-50466074 None:intergenic 30.0%
!! TACAATACTTTTGGGAAAAG+GGG + chr1_2:50466145-50466164 None:intergenic 30.0%
!! CTACAATACTTTTGGGAAAA+GGG + chr1_2:50466146-50466165 None:intergenic 30.0%
!! TCTACAATACTTTTGGGAAA+AGG + chr1_2:50466147-50466166 None:intergenic 30.0%
!! TTTCCCAAAAGTATTGTAGA+AGG - chr1_2:50466147-50466166 Msa0075300:intron 30.0%
! CTTCCTTCTACAATACTTTT+GGG + chr1_2:50466153-50466172 None:intergenic 30.0%
! ACTTCCTTCTACAATACTTT+TGG + chr1_2:50466154-50466173 None:intergenic 30.0%
TAAACATAACTCCAGACAAA+AGG + chr1_2:50466183-50466202 None:intergenic 30.0%
!! TCAGTCATTTTCGTAATCAA+CGG - chr1_2:50466321-50466340 Msa0075300:five_prime_UTR 30.0%
! TACATGTATCATTCTGGAAA+CGG - chr1_2:50466504-50466523 Msa0075300:five_prime_UTR 30.0%
!!! GAAACGGTTTTTTATCTTAG+CGG - chr1_2:50466520-50466539 Msa0075300:five_prime_UTR 30.0%
!!! TATCTTAGCGGTTTTTTGTA+CGG - chr1_2:50466532-50466551 Msa0075300:five_prime_UTR 30.0%
TGCAGTCTTCATTCAATACT+AGG - chr1_2:50461132-50461151 Msa0075300:three_prime_UTR 35.0%
CAATACTAGGCATCTCATAA+CGG - chr1_2:50461145-50461164 Msa0075300:three_prime_UTR 35.0%
TCCAACAACTACAAACAAGA+GGG + chr1_2:50461307-50461326 None:intergenic 35.0%
! GCTTTTACAGACAACTTTGT+TGG - chr1_2:50461350-50461369 Msa0075300:three_prime_UTR 35.0%
! AGGATCTGTTTTACTTGTGT+CGG - chr1_2:50461490-50461509 Msa0075300:CDS 35.0%
AGTTTCACAACCATGCATAT+AGG - chr1_2:50461518-50461537 Msa0075300:intron 35.0%
!!! TTTTTGTTGGGTTGTTTCTG+TGG - chr1_2:50461699-50461718 Msa0075300:intron 35.0%
!! GGTTGTTTCTGTGGAAAATT+TGG - chr1_2:50461708-50461727 Msa0075300:intron 35.0%
TTTCACCCCAAAAACCAAAA+TGG + chr1_2:50461843-50461862 None:intergenic 35.0%
!!! ATGTCATTTTCATTGGGGTT+AGG - chr1_2:50462046-50462065 Msa0075300:intron 35.0%
GGCATATATGTCAACACAAA+AGG - chr1_2:50462067-50462086 Msa0075300:intron 35.0%
AGAGCTATCCAAGATCTATT+AGG - chr1_2:50462382-50462401 Msa0075300:CDS 35.0%
GTAGTTAAGAGGTTCTCATT+CGG - chr1_2:50462471-50462490 Msa0075300:CDS 35.0%
AACATTATCTCATCCGATGT+GGG + chr1_2:50462583-50462602 None:intergenic 35.0%
AAACATTATCTCATCCGATG+TGG + chr1_2:50462584-50462603 None:intergenic 35.0%
ATAAACCAAAGGTAGATAGG+TGG + chr1_2:50462713-50462732 None:intergenic 35.0%
! TTATTGCAGATCTTCTGGAA+GGG + chr1_2:50463143-50463162 None:intergenic 35.0%
ATTATTGCAGATCTTCTGGA+AGG + chr1_2:50463144-50463163 None:intergenic 35.0%
CCATATTATTGCAGATCTTC+TGG + chr1_2:50463148-50463167 None:intergenic 35.0%
CCAGAAGATCTGCAATAATA+TGG - chr1_2:50463145-50463164 Msa0075300:CDS 35.0%
GATCTGCAATAATATGGTTG+GGG - chr1_2:50463151-50463170 Msa0075300:CDS 35.0%
ATACTCAACAGAAGCGATTA+AGG + chr1_2:50463550-50463569 None:intergenic 35.0%
ACAGATAAACACACGATGTT+TGG + chr1_2:50463749-50463768 None:intergenic 35.0%
ACCTTGCAAGGAAAATCTAA+AGG - chr1_2:50464049-50464068 Msa0075300:intron 35.0%
! TCCTTTAGATTTTCCTTGCA+AGG + chr1_2:50464053-50464072 None:intergenic 35.0%
GATAAAGGACAACGAAAGTA+CGG + chr1_2:50464281-50464300 None:intergenic 35.0%
CTTTCGTTGTCCTTTATCAT+TGG - chr1_2:50464283-50464302 Msa0075300:intron 35.0%
TCAAAGCTATGATAGCAACT+TGG - chr1_2:50464450-50464469 Msa0075300:intron 35.0%
TATGCTCAGAGTTACTAGAA+CGG + chr1_2:50464496-50464515 None:intergenic 35.0%
AGTAACTCTGAGCATAATAC+TGG - chr1_2:50464500-50464519 Msa0075300:intron 35.0%
GATATCTCTTTCAGATCCAA+TGG - chr1_2:50464548-50464567 Msa0075300:CDS 35.0%
TCACTTCTGCTGTGAATATA+TGG + chr1_2:50464626-50464645 None:intergenic 35.0%
CCGTTTCAAAAGATGTATCA+AGG - chr1_2:50464687-50464706 Msa0075300:CDS 35.0%
! TCACATCTTGTTTCAAACTC+GGG - chr1_2:50464818-50464837 Msa0075300:intron 35.0%
CAATTTATTGACATGAGACG+AGG + chr1_2:50464861-50464880 None:intergenic 35.0%
ACAGAAAACCGTATCATTGT+AGG - chr1_2:50464959-50464978 Msa0075300:intron 35.0%
CAGAAAACCGTATCATTGTA+GGG - chr1_2:50464960-50464979 Msa0075300:intron 35.0%
ATTTCGCTGCTATATTCAGA+CGG - chr1_2:50465007-50465026 Msa0075300:intron 35.0%
GAGAACGGTAAAGCAAAAAT+CGG - chr1_2:50465205-50465224 Msa0075300:intron 35.0%
GAGGTTATATAAAGCAGTAG+CGG + chr1_2:50465299-50465318 None:intergenic 35.0%
AGGTTAGAAATTGCAAGAGA+AGG - chr1_2:50465457-50465476 Msa0075300:intron 35.0%
TTAGAAATTGCAAGAGAAGG+TGG - chr1_2:50465460-50465479 Msa0075300:intron 35.0%
AATTATGCCTACATAGTTCC+AGG - chr1_2:50465557-50465576 Msa0075300:intron 35.0%
TACAAAACCTGGAACTATGT+AGG + chr1_2:50465567-50465586 None:intergenic 35.0%
TAAAACCAGTGTACAAAACC+TGG + chr1_2:50465578-50465597 None:intergenic 35.0%
!!! TGTACACTGGTTTTACAAGA+AGG - chr1_2:50465583-50465602 Msa0075300:intron 35.0%
GCACTAACATTTCGGATTAA+AGG + chr1_2:50465904-50465923 None:intergenic 35.0%
TAGCAGTAGCACTAACATTT+CGG + chr1_2:50465912-50465931 None:intergenic 35.0%
CCCGAAAATGAGTTTATAAG+TGG - chr1_2:50465941-50465960 Msa0075300:intron 35.0%
GAATTCCTCACCTAAAAAAC+TGG - chr1_2:50465967-50465986 Msa0075300:intron 35.0%
!!! CAAAACCAGTTTTTTAGGTG+AGG + chr1_2:50465975-50465994 None:intergenic 35.0%
!!! CCCTACAAAACCAGTTTTTT+AGG + chr1_2:50465980-50465999 None:intergenic 35.0%
AAAAGGGGTTATGGAAGTAA+AGG + chr1_2:50466130-50466149 None:intergenic 35.0%
!! CAGTCATTTTCGTAATCAAC+GGG - chr1_2:50466322-50466341 Msa0075300:five_prime_UTR 35.0%
! TCTTCATGATTTTCCCTTTG+TGG + chr1_2:50466360-50466379 None:intergenic 35.0%
AATTACTTAGGCTAGGAGAA+GGG + chr1_2:50466409-50466428 None:intergenic 35.0%
AAATTACTTAGGCTAGGAGA+AGG + chr1_2:50466410-50466429 None:intergenic 35.0%
CCTAAATCTATAGAATCAGG+AGG + chr1_2:50466447-50466466 None:intergenic 35.0%
CCTCCTGATTCTATAGATTT+AGG - chr1_2:50466444-50466463 Msa0075300:five_prime_UTR 35.0%
!!! ATCTTAGCGGTTTTTTGTAC+GGG - chr1_2:50466533-50466552 Msa0075300:five_prime_UTR 35.0%
!! TAGTTTCTGAAGCTTTAGCT+TGG - chr1_2:50466603-50466622 Msa0075300:five_prime_UTR 35.0%
CTACTAGAGCATAACTCATA+TGG - chr1_2:50466650-50466669 Msa0075300:five_prime_UTR 35.0%
! TATATGCACTGAACTGACTT+GGG + chr1_2:50466686-50466705 None:intergenic 35.0%
ATATATGCACTGAACTGACT+TGG + chr1_2:50466687-50466706 None:intergenic 35.0%
! CTGCATTTGGGATTGGATTA+GGG + chr1_2:50461117-50461136 None:intergenic 40.0%
! ACTGCATTTGGGATTGGATT+AGG + chr1_2:50461118-50461137 None:intergenic 40.0%
! ATGAAGACTGCATTTGGGAT+TGG + chr1_2:50461124-50461143 None:intergenic 40.0%
GTCCAACAACTACAAACAAG+AGG + chr1_2:50461308-50461327 None:intergenic 40.0%
CTGAGAGAAAGGAAAGAAGA+GGG + chr1_2:50461330-50461349 None:intergenic 40.0%
TCTGTAAAAGCCTGAGAGAA+AGG + chr1_2:50461341-50461360 None:intergenic 40.0%
TGAGGAGAGGTTGTAAAGAA+GGG - chr1_2:50461864-50461883 Msa0075300:intron 40.0%
TGCATTTCCAGACTCTACAA+TGG - chr1_2:50462101-50462120 Msa0075300:intron 40.0%
ATTTCCAGACTCTACAATGG+TGG - chr1_2:50462104-50462123 Msa0075300:intron 40.0%
TTTCCAGACTCTACAATGGT+GGG - chr1_2:50462105-50462124 Msa0075300:intron 40.0%
GACCTGTGTTATAAAGAGTC+AGG - chr1_2:50462191-50462210 Msa0075300:CDS 40.0%
GACCTGACTCTTTATAACAC+AGG + chr1_2:50462196-50462215 None:intergenic 40.0%
GTAGCCCTTACTTTACAATC+TGG - chr1_2:50462240-50462259 Msa0075300:CDS 40.0%
! TATGGGGTTTTTATGCCGTT+TGG - chr1_2:50462266-50462285 Msa0075300:CDS 40.0%
AAAATCCAAACTGCATAGGG+TGG - chr1_2:50462294-50462313 Msa0075300:CDS 40.0%
AAATCCAAACTGCATAGGGT+GGG - chr1_2:50462295-50462314 Msa0075300:CDS 40.0%
! ACAAAACCGGCTTAAAGTGA+GGG + chr1_2:50462635-50462654 None:intergenic 40.0%
! TACAAAACCGGCTTAAAGTG+AGG + chr1_2:50462636-50462655 None:intergenic 40.0%
!! TCACTTTAAGCCGGTTTTGT+AGG - chr1_2:50462635-50462654 Msa0075300:CDS 40.0%
!! CACTTTAAGCCGGTTTTGTA+GGG - chr1_2:50462636-50462655 Msa0075300:CDS 40.0%
CTATCTCAACCCTACAAAAC+CGG + chr1_2:50462648-50462667 None:intergenic 40.0%
GATAGGTGGAATTGACATGA+AGG + chr1_2:50462699-50462718 None:intergenic 40.0%
CAATTCCACCTATCTACCTT+TGG - chr1_2:50462705-50462724 Msa0075300:CDS 40.0%
CTTGCATGAAGAGAAACTTG+TGG - chr1_2:50462836-50462855 Msa0075300:CDS 40.0%
CTGTGCGATTTCACTTAAAC+AGG - chr1_2:50463029-50463048 Msa0075300:CDS 40.0%
ATATGCGTGTTAACGAAGCA+AGG - chr1_2:50463264-50463283 Msa0075300:CDS 40.0%
TATGCGTGTTAACGAAGCAA+GGG - chr1_2:50463265-50463284 Msa0075300:CDS 40.0%
CTGTGAATCTTGCTCATCTT+TGG + chr1_2:50463311-50463330 None:intergenic 40.0%
! TTCTTTTGAACTGGGATTGG+CGG - chr1_2:50463788-50463807 Msa0075300:CDS 40.0%
! ACTTTTGCAGCACTATATCC+AGG - chr1_2:50463950-50463969 Msa0075300:intron 40.0%
TCTCAAGAAGGAAACAGCAA+TGG - chr1_2:50463983-50464002 Msa0075300:intron 40.0%
AGATGATACTGAACCTTGCA+AGG - chr1_2:50464037-50464056 Msa0075300:intron 40.0%
CTTGAAAGAGACTATTGCTG+TGG - chr1_2:50464112-50464131 Msa0075300:intron 40.0%
AGAGACTATTGCTGTGGAAA+AGG - chr1_2:50464118-50464137 Msa0075300:intron 40.0%
AAGGAAAGATTGAACGCTGA+AGG - chr1_2:50464137-50464156 Msa0075300:intron 40.0%
TCACATAATCACGTAAGACG+CGG + chr1_2:50464214-50464233 None:intergenic 40.0%
GAGTACTTTGCAGTCAAAAG+TGG - chr1_2:50464242-50464261 Msa0075300:intron 40.0%
CATGTTGGATCCTGTTATTG+TGG - chr1_2:50464310-50464329 Msa0075300:intron 40.0%
TTGTCTCTCGTATGTTTGAC+CGG + chr1_2:50464339-50464358 None:intergenic 40.0%
AGAGACAATCCATCCAAAAG+TGG - chr1_2:50464351-50464370 Msa0075300:CDS 40.0%
!!! ATGATCAAGCCACTTTTGGA+TGG + chr1_2:50464363-50464382 None:intergenic 40.0%
ATCCAAAAGTGGCTTGATCA+TGG - chr1_2:50464362-50464381 Msa0075300:CDS 40.0%
TCCAAAAGTGGCTTGATCAT+GGG - chr1_2:50464363-50464382 Msa0075300:CDS 40.0%
GTAAGTCTTTGACGAGTCTT+TGG + chr1_2:50464401-50464420 None:intergenic 40.0%
!! TATGATAGCAACTTGGTGTG+AGG - chr1_2:50464457-50464476 Msa0075300:intron 40.0%
AGATCCAATGGAGAATGCAA+TGG - chr1_2:50464560-50464579 Msa0075300:CDS 40.0%
!! AAAGATGTATCAAGGGTGTC+TGG - chr1_2:50464695-50464714 Msa0075300:CDS 40.0%
TTTATTGACATGAGACGAGG+TGG + chr1_2:50464858-50464877 None:intergenic 40.0%
TTTCGCTGCTATATTCAGAC+GGG - chr1_2:50465008-50465027 Msa0075300:intron 40.0%
AGACAACAAGGCCTTGATTA+TGG - chr1_2:50465084-50465103 Msa0075300:intron 40.0%
TCTATTCAGCCTCTCTGTAA+TGG - chr1_2:50465183-50465202 Msa0075300:intron 40.0%
ATGCTTTAATTGCACCGGAA+CGG + chr1_2:50465231-50465250 None:intergenic 40.0%
TTCCGGTGCAATTAAAGCAT+TGG - chr1_2:50465231-50465250 Msa0075300:intron 40.0%
AGGAACACTTAGAGGAAAGA+AGG - chr1_2:50465270-50465289 Msa0075300:intron 40.0%
AAAGCTCGAATAGTTCAAGC+TGG - chr1_2:50465337-50465356 Msa0075300:intron 40.0%
TTGTTGAATCAGGTTCTCAG+AGG - chr1_2:50465503-50465522 Msa0075300:intron 40.0%
TGTTGAATCAGGTTCTCAGA+GGG - chr1_2:50465504-50465523 Msa0075300:intron 40.0%
!! TAGTTCCAGGTTTTGTACAC+TGG - chr1_2:50465570-50465589 Msa0075300:intron 40.0%
TGAGATAATGCAACTAAGGG+AGG + chr1_2:50465616-50465635 None:intergenic 40.0%
TACTCCAAGAGCAAAGGAAA+AGG - chr1_2:50465642-50465661 Msa0075300:intron 40.0%
! CATACCTTTTCCTTTGCTCT+TGG + chr1_2:50465649-50465668 None:intergenic 40.0%
CAAGAGCAAAGGAAAAGGTA+TGG - chr1_2:50465647-50465666 Msa0075300:intron 40.0%
! TCCTTTGCTATGCTTATGAG+TGG - chr1_2:50465685-50465704 Msa0075300:intron 40.0%
TCCACTCATAAGCATAGCAA+AGG + chr1_2:50465689-50465708 None:intergenic 40.0%
! TGTTCAACATGTGTCGCTAT+CGG + chr1_2:50465872-50465891 None:intergenic 40.0%
!! TTTCGGATTAAAGGAGTGTC+CGG + chr1_2:50465895-50465914 None:intergenic 40.0%
!!! TGGTTTTGTAGGGTTGAGTT+CGG - chr1_2:50465987-50466006 Msa0075300:intron 40.0%
!! ACTTTTGGGAAAAGGGGTTA+TGG + chr1_2:50466139-50466158 None:intergenic 40.0%
!! GAAGTTCTGATCCTTTTGTC+TGG - chr1_2:50466169-50466188 Msa0075300:intron 40.0%
! CTTGTTGTAAACATTCACGC+AGG - chr1_2:50466286-50466305 Msa0075300:intron 40.0%
! GCCCTCTTGTTTGTAGTTGT+TGG - chr1_2:50461303-50461322 Msa0075300:three_prime_UTR 45.0%
CCTGAGAGAAAGGAAAGAAG+AGG + chr1_2:50461331-50461350 None:intergenic 45.0%
CCTCTTCTTTCCTTTCTCTC+AGG - chr1_2:50461328-50461347 Msa0075300:three_prime_UTR 45.0%
!!! TGGTTTTTGGGGTGAAACTG+AGG - chr1_2:50461846-50461865 Msa0075300:intron 45.0%
CTGAGGAGAGGTTGTAAAGA+AGG - chr1_2:50461863-50461882 Msa0075300:intron 45.0%
! TTTTCCCACCCTATGCAGTT+TGG + chr1_2:50462302-50462321 None:intergenic 45.0%
GTGGGAAAAGAAACAGTCTC+TGG - chr1_2:50462313-50462332 Msa0075300:CDS 45.0%
ATGTCTAGTGCTCAGTGTGA+GGG - chr1_2:50462542-50462561 Msa0075300:CDS 45.0%
AGGGCATAGGTTTCACTGTT+TGG + chr1_2:50463124-50463143 None:intergenic 45.0%
TCCATAACATCGTCGAGTAC+TGG + chr1_2:50463194-50463213 None:intergenic 45.0%
TTAGCCAAAACCGATGCAGA+TGG + chr1_2:50463495-50463514 None:intergenic 45.0%
CTTCCAACTTTGCACATACC+TGG + chr1_2:50463521-50463540 None:intergenic 45.0%
CAGGTATGTGCAAAGTTGGA+AGG - chr1_2:50463519-50463538 Msa0075300:CDS 45.0%
CTCAACAGAAGCGATTAAGG+AGG + chr1_2:50463547-50463566 None:intergenic 45.0%
! TGACAATGCCTCTTGCTGTA+CGG - chr1_2:50463583-50463602 Msa0075300:CDS 45.0%
AACTGTTGCCACTCTGTAGT+TGG - chr1_2:50463692-50463711 Msa0075300:CDS 45.0%
CACTCTGTAGTTGGAGACAT+GGG - chr1_2:50463701-50463720 Msa0075300:CDS 45.0%
TCTTGAGACACTGAAGTTCC+TGG + chr1_2:50463971-50463990 None:intergenic 45.0%
GGAACTTCAGTGTCTCAAGA+AGG - chr1_2:50463971-50463990 Msa0075300:intron 45.0%
! AAGGACAACGAAAGTACGGA+GGG + chr1_2:50464277-50464296 None:intergenic 45.0%
! AAAGGACAACGAAAGTACGG+AGG + chr1_2:50464278-50464297 None:intergenic 45.0%
GATCCTGTTATTGTGGCTTC+CGG - chr1_2:50464317-50464336 Msa0075300:intron 45.0%
CTCAGAGTTACTAGAACGGT+TGG + chr1_2:50464492-50464511 None:intergenic 45.0%
GCATCCATTGCATTCTCCAT+TGG + chr1_2:50464567-50464586 None:intergenic 45.0%
ATGCGGGAGGGATAGAAAAT+GGG - chr1_2:50464750-50464769 Msa0075300:CDS 45.0%
CACACTGCCCTACAATGATA+CGG + chr1_2:50464970-50464989 None:intergenic 45.0%
GTATCATTGTAGGGCAGTGT+GGG - chr1_2:50464969-50464988 Msa0075300:intron 45.0%
TATCATTGTAGGGCAGTGTG+GGG - chr1_2:50464970-50464989 Msa0075300:intron 45.0%
CAAGGCCTTGATTATGGAAG+CGG - chr1_2:50465090-50465109 Msa0075300:intron 45.0%
AAGGCCTTGATTATGGAAGC+GGG - chr1_2:50465091-50465110 Msa0075300:intron 45.0%
! AGCCTCTCTGTAATGGAGAA+CGG - chr1_2:50465190-50465209 Msa0075300:intron 45.0%
TACCGTTCTCCATTACAGAG+AGG + chr1_2:50465195-50465214 None:intergenic 45.0%
AAAGCAAAAATCGGCCGTTC+CGG - chr1_2:50465214-50465233 Msa0075300:intron 45.0%
CGCCAATGCTTTAATTGCAC+CGG + chr1_2:50465236-50465255 None:intergenic 45.0%
!! CGGTGCAATTAAAGCATTGG+CGG - chr1_2:50465234-50465253 Msa0075300:intron 45.0%
CTTTCCTCTAAGTGTTCCTG+AGG + chr1_2:50465269-50465288 None:intergenic 45.0%
AGCTGGAGCTGTCAAATTTC+TGG - chr1_2:50465354-50465373 Msa0075300:intron 45.0%
! AGCCTTGTCAACCATTCCAT+CGG + chr1_2:50465398-50465417 None:intergenic 45.0%
TGTCGACAGGTTTGACAGAA+CGG + chr1_2:50465425-50465444 None:intergenic 45.0%
GTCAAACCTGTCGACAATTG+CGG - chr1_2:50465429-50465448 Msa0075300:intron 45.0%
GTTGAATCAGGTTCTCAGAG+GGG - chr1_2:50465505-50465524 Msa0075300:intron 45.0%
ATCTGGTACTCCAAGAGCAA+AGG - chr1_2:50465636-50465655 Msa0075300:intron 45.0%
TGTCTGCGTCTTTGCTTCAT+AGG + chr1_2:50465759-50465778 None:intergenic 45.0%
TAGCGACACATGTTGAACAC+CGG - chr1_2:50465873-50465892 Msa0075300:intron 45.0%
GAAGCAGCTACTACCACAAA+GGG - chr1_2:50466344-50466363 Msa0075300:five_prime_UTR 45.0%
! TCTACTTTGGTGGCTGTACT+CGG - chr1_2:50466569-50466588 Msa0075300:five_prime_UTR 45.0%
!! ACTGAACTGACTTGGGAGTT+GGG + chr1_2:50466679-50466698 None:intergenic 45.0%
! TTTGGGGTGAAACTGAGGAG+AGG - chr1_2:50461851-50461870 Msa0075300:intron 50.0%
TCTCCCACCATTGTAGAGTC+TGG + chr1_2:50462111-50462130 None:intergenic 50.0%
GCGGATGGCCTAATAGATCT+TGG + chr1_2:50462393-50462412 None:intergenic 50.0%
! GGACATCTGGAGCATAACCA+GGG + chr1_2:50462423-50462442 None:intergenic 50.0%
! TGGACATCTGGAGCATAACC+AGG + chr1_2:50462424-50462443 None:intergenic 50.0%
CATGTCTAGTGCTCAGTGTG+AGG - chr1_2:50462541-50462560 Msa0075300:CDS 50.0%
TGTCTAGTGCTCAGTGTGAG+GGG - chr1_2:50462543-50462562 Msa0075300:CDS 50.0%
GTGTGTTAGGAGTCCCACAT+CGG - chr1_2:50462567-50462586 Msa0075300:CDS 50.0%
AGGCATCCCTCACTTTAAGC+CGG - chr1_2:50462626-50462645 Msa0075300:CDS 50.0%
! CAGATCTTCTGGAAGGGCAT+AGG + chr1_2:50463137-50463156 None:intergenic 50.0%
GCCAGTACTCGACGATGTTA+TGG - chr1_2:50463190-50463209 Msa0075300:CDS 50.0%
! TGCAGATGGTGGTGACTCTA+AGG + chr1_2:50463481-50463500 None:intergenic 50.0%
AGAGTCACCACCATCTGCAT+CGG - chr1_2:50463482-50463501 Msa0075300:CDS 50.0%
!!! ACCACCATCTGCATCGGTTT+TGG - chr1_2:50463488-50463507 Msa0075300:CDS 50.0%
!!! ATCGGTTTTGGCTAACCTCC+AGG - chr1_2:50463500-50463519 Msa0075300:CDS 50.0%
CCAACTTTGCACATACCTGG+AGG + chr1_2:50463518-50463537 None:intergenic 50.0%
CCTCCAGGTATGTGCAAAGT+TGG - chr1_2:50463515-50463534 Msa0075300:CDS 50.0%
! TGCCTCTTGCTGTACGGTTT+AGG - chr1_2:50463589-50463608 Msa0075300:CDS 50.0%
! GCCTCTTGCTGTACGGTTTA+GGG - chr1_2:50463590-50463609 Msa0075300:CDS 50.0%
! CCTCTTGCTGTACGGTTTAG+GGG - chr1_2:50463591-50463610 Msa0075300:CDS 50.0%
CCATGTCTCCAACTACAGAG+TGG + chr1_2:50463703-50463722 None:intergenic 50.0%
CCACTCTGTAGTTGGAGACA+TGG - chr1_2:50463700-50463719 Msa0075300:CDS 50.0%
TGACCGGAAGCCACAATAAC+AGG + chr1_2:50464323-50464342 None:intergenic 50.0%
!! GCCCATGATCAAGCCACTTT+TGG + chr1_2:50464367-50464386 None:intergenic 50.0%
TTCTATCCCTCCCGCATCTA+CGG + chr1_2:50464747-50464766 None:intergenic 50.0%
GATGCGGGAGGGATAGAAAA+TGG - chr1_2:50464749-50464768 Msa0075300:CDS 50.0%
CTACTGCTGCAGAAGAACTG+AGG - chr1_2:50464918-50464937 Msa0075300:intron 50.0%
CGTATCATTGTAGGGCAGTG+TGG - chr1_2:50464968-50464987 Msa0075300:intron 50.0%
AGGCCTTGATTATGGAAGCG+GGG - chr1_2:50465092-50465111 Msa0075300:intron 50.0%
! GACAGGAAATGATGGTGCCA+AGG - chr1_2:50465144-50465163 Msa0075300:intron 50.0%
! TGGTGCCAAGGAGAATTCTG+CGG - chr1_2:50465156-50465175 Msa0075300:intron 50.0%
CTTGCCTCAGGAACACTTAG+AGG - chr1_2:50465262-50465281 Msa0075300:intron 50.0%
TTGTCAACCATTCCATCGGC+AGG + chr1_2:50465394-50465413 None:intergenic 50.0%
TGCCGATGGAATGGTTGACA+AGG - chr1_2:50465393-50465412 Msa0075300:intron 50.0%
AAACCTGTCGACAATTGCGG+AGG - chr1_2:50465432-50465451 Msa0075300:intron 50.0%
AACCTGTCGACAATTGCGGA+GGG - chr1_2:50465433-50465452 Msa0075300:intron 50.0%
ATCAGGTTCTCAGAGGGGAA+AGG - chr1_2:50465510-50465529 Msa0075300:intron 50.0%
GTCCCACACTAGATGAGACA+TGG - chr1_2:50465733-50465752 Msa0075300:intron 50.0%
GGCCATGTCTCATCTAGTGT+GGG + chr1_2:50465738-50465757 None:intergenic 50.0%
AGGCCATGTCTCATCTAGTG+TGG + chr1_2:50465739-50465758 None:intergenic 50.0%
TGAAGCAAAGACGCAGACAC+TGG - chr1_2:50465760-50465779 Msa0075300:intron 50.0%
GGAAGCAGCTACTACCACAA+AGG - chr1_2:50466343-50466362 Msa0075300:five_prime_UTR 50.0%
!! TGAACTGACTTGGGAGTTGG+GGG + chr1_2:50466677-50466696 None:intergenic 50.0%
!! CTGAACTGACTTGGGAGTTG+GGG + chr1_2:50466678-50466697 None:intergenic 50.0%
!! CACTGAACTGACTTGGGAGT+TGG + chr1_2:50466680-50466699 None:intergenic 50.0%
! ATGGTGGGAGAGATGCGTAG+TGG - chr1_2:50462120-50462139 Msa0075300:intron 55.0%
TGGTGGGAGAGATGCGTAGT+GGG - chr1_2:50462121-50462140 Msa0075300:intron 55.0%
! GCATAACCAGGGAGGCATAG+CGG + chr1_2:50462412-50462431 None:intergenic 55.0%
! CATCTGGAGCATAACCAGGG+AGG + chr1_2:50462420-50462439 None:intergenic 55.0%
ATGCTCCAGATGTCCAGTCC+TGG - chr1_2:50462428-50462447 Msa0075300:CDS 55.0%
TGCTCCAGATGTCCAGTCCT+GGG - chr1_2:50462429-50462448 Msa0075300:CDS 55.0%
! CAGTGTGAGGGGTGTGTGTT+AGG - chr1_2:50462554-50462573 Msa0075300:CDS 55.0%
GCCAAAACCGATGCAGATGG+TGG + chr1_2:50463492-50463511 None:intergenic 55.0%
CCCCTAAACCGTACAGCAAG+AGG + chr1_2:50463594-50463613 None:intergenic 55.0%
!! GAAGGTGTCGTCCGTAGATG+CGG - chr1_2:50464733-50464752 Msa0075300:CDS 55.0%
!! AAGGTGTCGTCCGTAGATGC+GGG - chr1_2:50464734-50464753 Msa0075300:CDS 55.0%
GGCCTTGATTATGGAAGCGG+GGG - chr1_2:50465093-50465112 Msa0075300:intron 55.0%
AGCCCCCGCTTCCATAATCA+AGG + chr1_2:50465098-50465117 None:intergenic 55.0%
AGCTGCCGCAGAATTCTCCT+TGG + chr1_2:50465164-50465183 None:intergenic 55.0%
TTGGCGGAACTTCTTGCCTC+AGG - chr1_2:50465250-50465269 Msa0075300:intron 55.0%
! GAGTTAACGGATCCTGCCGA+TGG - chr1_2:50465379-50465398 Msa0075300:intron 55.0%
AACGGATCCTGCCGATGGAA+TGG - chr1_2:50465384-50465403 Msa0075300:intron 55.0%
TTCCCTCCGCAATTGTCGAC+AGG + chr1_2:50465438-50465457 None:intergenic 55.0%
TGTCGACAATTGCGGAGGGA+AGG - chr1_2:50465437-50465456 Msa0075300:intron 55.0%
CGACACGACATAGCCACATG+TGG + chr1_2:50465845-50465864 None:intergenic 55.0%
! ACTTTGGTGGCTGTACTCGG+AGG - chr1_2:50466572-50466591 Msa0075300:five_prime_UTR 55.0%
! AACCAGGGAGGCATAGCGGA+TGG + chr1_2:50462408-50462427 None:intergenic 60.0%
TGTCGTCCGTAGATGCGGGA+GGG - chr1_2:50464738-50464757 Msa0075300:CDS 60.0%
! TTGGTGGCTGTACTCGGAGG+AGG - chr1_2:50466575-50466594 Msa0075300:five_prime_UTR 60.0%
CACGCCCAGGACTGGACATC+TGG + chr1_2:50462436-50462455 None:intergenic 65.0%
TGTCCAGTCCTGGGCGTGTG+AGG - chr1_2:50462438-50462457 Msa0075300:CDS 65.0%
GTCCAGTCCTGGGCGTGTGA+GGG - chr1_2:50462439-50462458 Msa0075300:CDS 65.0%
TCCAGTCCTGGGCGTGTGAG+GGG - chr1_2:50462440-50462459 Msa0075300:CDS 65.0%
GGGGGTGGGGGGTAGTTAAG+AGG - chr1_2:50462460-50462479 Msa0075300:CDS 65.0%
GTGTCGTCCGTAGATGCGGG+AGG - chr1_2:50464737-50464756 Msa0075300:CDS 65.0%
GGCCATCCGCTATGCCTCCC+TGG - chr1_2:50462403-50462422 Msa0075300:CDS 70.0%
CCAGTCCTGGGCGTGTGAGG+GGG - chr1_2:50462441-50462460 Msa0075300:CDS 70.0%
CAGTCCTGGGCGTGTGAGGG+GGG - chr1_2:50462442-50462461 Msa0075300:CDS 70.0%
CCCCCTCACACGCCCAGGAC+TGG + chr1_2:50462444-50462463 None:intergenic 75.0%
TCCTGGGCGTGTGAGGGGGG+TGG - chr1_2:50462445-50462464 Msa0075300:CDS 75.0%
CCTGGGCGTGTGAGGGGGGT+GGG - chr1_2:50462446-50462465 Msa0075300:CDS 75.0%
CTGGGCGTGTGAGGGGGGTG+GGG - chr1_2:50462447-50462466 Msa0075300:CDS 75.0%
TGGGCGTGTGAGGGGGGTGG+GGG - chr1_2:50462448-50462467 Msa0075300:CDS 75.0%
! CCCACCCCCCTCACACGCCC+AGG + chr1_2:50462449-50462468 None:intergenic 80.0%
! GGGCGTGTGAGGGGGGTGGG+GGG - chr1_2:50462449-50462468 Msa0075300:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 50461077 50466765 50461077 ID=Msa0075300;Name=Msa0075300
chr1_2 mRNA 50461077 50466765 50461077 ID=Msa0075300-mRNA-1;Parent=Msa0075300;Name=Msa0075300-mRNA-1;_AED=0.02;_eAED=0.02;_QI=453|1|1|1|0.75|0.6|5|389|726
chr1_2 exon 50461077 50461534 50461077 ID=Msa0075300-mRNA-1:exon:15558;Parent=Msa0075300-mRNA-1
chr1_2 exon 50462179 50463882 50462179 ID=Msa0075300-mRNA-1:exon:15557;Parent=Msa0075300-mRNA-1
chr1_2 exon 50464321 50464437 50464321 ID=Msa0075300-mRNA-1:exon:15556;Parent=Msa0075300-mRNA-1
chr1_2 exon 50464511 50464791 50464511 ID=Msa0075300-mRNA-1:exon:15555;Parent=Msa0075300-mRNA-1
chr1_2 exon 50466303 50466765 50466303 ID=Msa0075300-mRNA-1:exon:15554;Parent=Msa0075300-mRNA-1
chr1_2 five_prime_UTR 50466313 50466765 50466313 ID=Msa0075300-mRNA-1:five_prime_utr;Parent=Msa0075300-mRNA-1
chr1_2 CDS 50466303 50466312 50466303 ID=Msa0075300-mRNA-1:cds;Parent=Msa0075300-mRNA-1
chr1_2 CDS 50464511 50464791 50464511 ID=Msa0075300-mRNA-1:cds;Parent=Msa0075300-mRNA-1
chr1_2 CDS 50464321 50464437 50464321 ID=Msa0075300-mRNA-1:cds;Parent=Msa0075300-mRNA-1
chr1_2 CDS 50462179 50463882 50462179 ID=Msa0075300-mRNA-1:cds;Parent=Msa0075300-mRNA-1
chr1_2 CDS 50461466 50461534 50461466 ID=Msa0075300-mRNA-1:cds;Parent=Msa0075300-mRNA-1
chr1_2 three_prime_UTR 50461077 50461465 50461077 ID=Msa0075300-mRNA-1:three_prime_utr;Parent=Msa0075300-mRNA-1
Gene Sequence

>Msa0075300

ATGCATATAGGTCAAACGGATACAGCGTCAGTAACATGTCTGATCAACAGCATTTCTCGATTCGTTCATCTAGTTTCTTGCCAAACAGTGAAACCTATGCCCTTCCAGAAGATCTGCAATAATATGGTTGGGGTGTTAAAGCGTTTGAAGCCAGTACTCGACGATGTTATGGATTACAAAATTCCTTTACATCAAAATTTATGTAAAGTATGTGAAGAATTGGATATGCGTGTTAACGAAGCAAGGGATTTCATTGAAAAATGGGGTCCAAAGATGAGCAAGATTCACAGTGTTCTACAAAGTGGTACATTGTTGATCAAGTTACAAAGCACTTCACTTGACATTTGTCACATGATAGTTAAATCCTTAGAGTCACCACCATCTGCATCGGTTTTGGCTAACCTCCAGCACTATATCCAGGAACTTCAGTGTCTCAAGAAGGAAACAGCAATGGTCTATATAGAAAAGGCAATGAGAGAGCAAAGAGATGATACTGAACCTTGCAAGGAAAATCTAAAGGAAATGATTGAGTTACTTAAATTGACATCAACTCAGGAGCTCTTGAAAGAGACTATTGCTGTGGAAAAGGAAAGATTGAACGCTGAAGGACATAAAATGAAAAGCGACTTGGAAGAAATCAATGAAATTGTGAATCTTGTCCGCGTCTTACGTGATTATGTGATGAAAACTGAGTACTTTGCAGTCAAAAGTGGTTTCTCATTCCCTCCGTACTTTCGTTGTCCTTTATCATTGGAACTCATGTTGGATCCTGTTATTGTGGCTTCCGGTCAAACATACGAGAGACAATCCATCCAAAAGTGGCTTGATCATGGGCTGACTGTTTGTCCAAAGACTCGTCAAAGACTTACTCATACAAATCTCATTCCCAATTATACTGTCAAAGCTATGATAGCAACTTGGTGTGAGGAAAATAACACCAACCGTTCTAGTAACTCTGAGCATAATACTGGAAATGCATTTGAAGAACAAAAAGGCGATATCTCTTTCAGATCCAATGGAGAATGCAATGGATGCCAGAATATAGAAATAGAAAAGTGGGAGCTACAATCACCATATATTCACAGCAGAAGTGAATCCTTTTCAAGTTCAATTTCTAGTAGTGATTGTCTACTTGCCGTTTCAAAAGATGTATCAAGGGTGTCTGGTAAGTATCAAATTACGAAGGTGTCGTCCGTAGATGCGGGAGGGATAGAAAATGGGAAAAATAATAACAGTAATACTACTAATAGTCATTCAAGAGTTGATTCACATCTTGTTTCAAACTCGGGATTGAATGAATTGACCACCTCGTCTCATGTCAATAAATTGATCGAAGATCTCCAAAACGAATCAATTGAAGTGAAAACTACTGCTGCAGAAGAACTGAGGCTCCTTACAAAGCATAACACAGAAAACCGTATCATTGTAGGGCAGTGTGGGGCTGTCATGCCTTTAATTTCGCTGCTATATTCAGACGGGAAAGTAACACAAGAGCATGCTGTGACAGCTCTGCTTAATTTATCAATTAATGAAGACAACAAGGCCTTGATTATGGAAGCGGGGGCTATTGAACCCCTTATCCATGTTTTAAAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCGGCAGCTCTATTCAGCCTCTCTGTAATGGAGAACGGTAAAGCAAAAATCGGCCGTTCCGGTGCAATTAAAGCATTGGCGGAACTTCTTGCCTCAGGAACACTTAGAGGAAAGAAGGATGCCGCTACTGCTTTATATAACCTCTCAATATTTCATGAGAATAAAGCTCGAATAGTTCAAGCTGGAGCTGTCAAATTTCTGGTTGAGTTAACGGATCCTGCCGATGGAATGGTTGACAAGGCTGTTGCCGTTCTGTCAAACCTGTCGACAATTGCGGAGGGAAGGTTAGAAATTGCAAGAGAAGGTGGCATCCCGTCATTAGTTGAAATTGTTGAATCAGGTTCTCAGAGGGGAAAGGAAAATGCTGCTTCAATTCTCTTACAATTATGCCTACATAGTTCCAGGTTTTGTACACTGGTTTTACAAGAAGGAGCTGTACCTCCCTTAGTTGCATTATCTCAATCTGGTACTCCAAGAGCAAAGGAAAAGGCACAACAACTTCTCAGTCATTTTCGTAATCAACGGGAAGCAGCTACTACCACAAAGGGAAAATCATGA
Protein sequence

>Msa0075300

MHIGQTDTASVTCLINSISRFVHLVSCQTVKPMPFQKICNNMVGVLKRLKPVLDDVMDYKIPLHQNLCKVCEELDMRVNEARDFIEKWGPKMSKIHSVLQSGTLLIKLQSTSLDICHMIVKSLESPPSASVLANLQHYIQELQCLKKETAMVYIEKAMREQRDDTEPCKENLKEMIELLKLTSTQELLKETIAVEKERLNAEGHKMKSDLEEINEIVNLVRVLRDYVMKTEYFAVKSGFSFPPYFRCPLSLELMLDPVIVASGQTYERQSIQKWLDHGLTVCPKTRQRLTHTNLIPNYTVKAMIATWCEENNTNRSSNSEHNTGNAFEEQKGDISFRSNGECNGCQNIEIEKWELQSPYIHSRSESFSSSISSSDCLLAVSKDVSRVSGKYQITKVSSVDAGGIENGKNNNSNTTNSHSRVDSHLVSNSGLNELTTSSHVNKLIEDLQNESIEVKTTAAEELRLLTKHNTENRIIVGQCGAVMPLISLLYSDGKVTQEHAVTALLNLSINEDNKALIMEAGAIEPLIHVLKTGNDGAKENSAAALFSLSVMENGKAKIGRSGAIKALAELLASGTLRGKKDAATALYNLSIFHENKARIVQAGAVKFLVELTDPADGMVDKAVAVLSNLSTIAEGRLEIAREGGIPSLVEIVESGSQRGKENAASILLQLCLHSSRFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQREAATTTKGKS*