Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083880 | XP_013469364.1 | 86.555 | 119 | 5 | 3 | 44 | 156 | 49 | 162 | 6.43e-53 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083880 | A0A072VNP0 | 86.555 | 119 | 5 | 3 | 44 | 156 | 49 | 162 | 3.07e-53 | 175 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0083880 | 0.802274 | 6.064794e-49 | -8.615850e-47 |
| Msa0047470 | Msa0083880 | 0.827483 | 1.525734e-54 | -8.615850e-47 |
| Msa0083880 | Msa0148360 | 0.802120 | 6.521747e-49 | -8.615850e-47 |
| Msa0083880 | Msa0203180 | 0.803974 | 2.698086e-49 | -8.615850e-47 |
| Msa0083880 | Msa0284870 | 0.806874 | 6.654591e-50 | -8.615850e-47 |
| Msa0083880 | Msa0323640 | 0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0083880 | Msa0417150 | 0.821060 | 4.934577e-53 | -8.615850e-47 |
| Msa0083880 | Msa0421800 | 0.809855 | 1.539589e-50 | -8.615850e-47 |
| Msa0083880 | Msa0467800 | 0.823627 | 1.251345e-53 | -8.615850e-47 |
| Msa0083880 | Msa0467880 | 0.816024 | 6.841899e-52 | -8.615850e-47 |
| Msa0083880 | Msa0514260 | 0.803925 | 2.761919e-49 | -8.615850e-47 |
| Msa0083880 | Msa0534420 | 0.809352 | 1.974492e-50 | -8.615850e-47 |
| Msa0083880 | Msa0576600 | 0.804488 | 2.108700e-49 | -8.615850e-47 |
| Msa0083880 | Msa0617830 | 0.814644 | 1.386960e-51 | -8.615850e-47 |
| Msa0083880 | Msa0630970 | 0.807125 | 5.887252e-50 | -8.615850e-47 |
| Msa0083880 | Msa0656270 | 0.800073 | 1.709920e-48 | -8.615850e-47 |
| Msa0083880 | Msa0656680 | 0.808296 | 3.320849e-50 | -8.615850e-47 |
| Msa0083880 | Msa0724050 | 0.809194 | 2.134962e-50 | -8.615850e-47 |
| Msa0083880 | Msa0763880 | 0.810391 | 1.179735e-50 | -8.615850e-47 |
| Msa0083880 | Msa0763910 | 0.801709 | 7.924191e-49 | -8.615850e-47 |
| Msa0083880 | Msa0899700 | 0.818114 | 2.321288e-52 | -8.615850e-47 |
| Msa0083880 | Msa0934830 | 0.823753 | 1.168960e-53 | -8.615850e-47 |
| Msa0083880 | Msa0971860 | 0.815605 | 8.484319e-52 | -8.615850e-47 |
| Msa0083880 | Msa1198450 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0083880 | Msa1440180 | 0.821757 | 3.407902e-53 | -8.615850e-47 |
| Msa0083880 | Msa1449740 | 0.822302 | 2.547530e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083880 | MtrunA17_Chr1g0198071 | 86.555 | 119 | 5 | 3 | 44 | 156 | 49 | 162 | 5.91e-57 | 175 |
| Msa0083880 | MtrunA17_Chr1g0198051 | 86.275 | 102 | 3 | 3 | 44 | 139 | 44 | 140 | 2.57e-56 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083880 | AT3G52230.1 | 34.586 | 133 | 78 | 2 | 13 | 145 | 3 | 126 | 3.93e-15 | 68.6 |
Find 64 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCTCCTTCCTGCAATTT+TGG | 0.050590 | 1_2:+63057579 | None:intergenic |
| TGAAAATTGAAATTGAAATT+AGG | 0.148572 | 1_2:+63057669 | None:intergenic |
| TAGAAATAGAAAGATTATTT+TGG | 0.195043 | 1_2:+63055875 | None:intergenic |
| AACAACAGCAAGTTGGGTTT+TGG | 0.222737 | 1_2:+63057527 | None:intergenic |
| TCTTTATTTCAAGATGGATT+TGG | 0.256743 | 1_2:-63056174 | Msa0083880:CDS |
| TGCAACTTTAAATTATTTAT+AGG | 0.269038 | 1_2:+63057880 | None:intergenic |
| ATGGAGAGGGAAGAGGAATT+TGG | 0.280219 | 1_2:+63057838 | None:intergenic |
| GAAAATTGAAATTGAAATTA+GGG | 0.298998 | 1_2:+63057670 | None:intergenic |
| TGTTGTTTCTGAACCTCTTC+AGG | 0.303068 | 1_2:-63057511 | Msa0083880:CDS |
| TTGTCGAGTAGTAGTAATTT+GGG | 0.309843 | 1_2:+63057761 | None:intergenic |
| CTTTATTTCAAGATGGATTT+GGG | 0.314460 | 1_2:-63056173 | Msa0083880:CDS |
| GTTGTCGAGTAGTAGTAATT+TGG | 0.315340 | 1_2:+63057760 | None:intergenic |
| TATGAGAGGATTAGAAGTTT+TGG | 0.318592 | 1_2:+63057467 | None:intergenic |
| TAATCCTCTCATACTCTATC+AGG | 0.377669 | 1_2:-63057457 | Msa0083880:intron |
| TTCAGAAACAACAGCAAGTT+GGG | 0.389578 | 1_2:+63057521 | None:intergenic |
| TAAGAACAAACCAAAATTGC+AGG | 0.405475 | 1_2:-63057589 | Msa0083880:CDS |
| TTGGGGAAAGTCACAACGTT+GGG | 0.448722 | 1_2:+63057546 | None:intergenic |
| ATTAGGGAAGAAAGGAAGAA+AGG | 0.454254 | 1_2:+63057686 | None:intergenic |
| TTAGGGAAGAAAGGAAGAAA+GGG | 0.457038 | 1_2:+63057687 | None:intergenic |
| GGGTGATGGTCGTGGATCTC+AGG | 0.463654 | 1_2:-63056098 | Msa0083880:CDS |
| AAATTGAAATTAGGGAAGAA+AGG | 0.474895 | 1_2:+63057678 | None:intergenic |
| GAGCATTCTTTATTTCAAGA+TGG | 0.479735 | 1_2:-63056180 | Msa0083880:CDS |
| TGTCACATTCTATGTTTGAA+AGG | 0.487687 | 1_2:-63056020 | Msa0083880:three_prime_UTR |
| ACTTTAAATTATTTATAGGT+AGG | 0.488505 | 1_2:+63057884 | None:intergenic |
| GATGGTGAGGGTGATGGTCG+TGG | 0.498810 | 1_2:-63056106 | Msa0083880:CDS |
| GTCTTCCGATGAGGATGGTG+AGG | 0.508946 | 1_2:-63056119 | Msa0083880:CDS |
| TTTGGGCAAGGTGGAATGAA+AGG | 0.512598 | 1_2:-63056156 | Msa0083880:CDS |
| GATGACAATGGAGAGGGAAG+AGG | 0.523679 | 1_2:+63057831 | None:intergenic |
| ATTTCAGATTCAGCCTGAAG+AGG | 0.539031 | 1_2:+63057498 | None:intergenic |
| CCAAAATTGCAGGAAGGAGG+AGG | 0.542821 | 1_2:-63057579 | Msa0083880:CDS |
| GTTCAGAAACAACAGCAAGT+TGG | 0.545868 | 1_2:+63057520 | None:intergenic |
| TGATATTACCAAGGGGTGGT+TGG | 0.552007 | 1_2:-63055952 | Msa0083880:three_prime_UTR |
| TTTCAAGATGGATTTGGGCA+AGG | 0.557537 | 1_2:-63056168 | Msa0083880:CDS |
| AAATTGCAGGAAGGAGGAGG+AGG | 0.559286 | 1_2:-63057576 | Msa0083880:CDS |
| ATACTCTTTGATATTACCAA+GGG | 0.564141 | 1_2:-63055960 | Msa0083880:three_prime_UTR |
| GGGTGATTCTGAAGCAGCAG+AGG | 0.569470 | 1_2:+63057716 | None:intergenic |
| GATATATACCAACCACCCCT+TGG | 0.580704 | 1_2:+63055944 | None:intergenic |
| CAAGATGGATTTGGGCAAGG+TGG | 0.583805 | 1_2:-63056165 | Msa0083880:CDS |
| AGATTGATTTCTCTATGCAG+TGG | 0.589329 | 1_2:+63057804 | None:intergenic |
| ATCACCCTCACCATCCTCAT+CGG | 0.589365 | 1_2:+63056114 | None:intergenic |
| GATGAGGATGGTGAGGGTGA+TGG | 0.591873 | 1_2:-63056112 | Msa0083880:CDS |
| GGGAGGTCTTCCGATGAGGA+TGG | 0.593536 | 1_2:-63056124 | Msa0083880:CDS |
| GGAATGAAAGGAAGGCTCGA+GGG | 0.594291 | 1_2:-63056144 | Msa0083880:CDS |
| GGCGGAGATGACAATGGAGA+GGG | 0.594481 | 1_2:+63057825 | None:intergenic |
| TCGAGTAGTAGTAATTTGGG+TGG | 0.595051 | 1_2:+63057764 | None:intergenic |
| GGCAAGGTGGAATGAAAGGA+AGG | 0.600306 | 1_2:-63056152 | Msa0083880:CDS |
| TTTGGGGAAAGTCACAACGT+TGG | 0.610783 | 1_2:+63057545 | None:intergenic |
| AGTACCTGATAGAGTATGAG+AGG | 0.614267 | 1_2:+63057453 | None:intergenic |
| AAACCAAAATTGCAGGAAGG+AGG | 0.614386 | 1_2:-63057582 | Msa0083880:CDS |
| GATACTCTTTGATATTACCA+AGG | 0.619631 | 1_2:-63055961 | Msa0083880:three_prime_UTR |
| TCTTTGATATTACCAAGGGG+TGG | 0.624366 | 1_2:-63055956 | Msa0083880:three_prime_UTR |
| CTATGCATTTCTAGACCGTG+AGG | 0.631616 | 1_2:-63055855 | Msa0083880:three_prime_UTR |
| TGCAGTGGCGGAGATGACAA+TGG | 0.636530 | 1_2:+63057819 | None:intergenic |
| AACAAACCAAAATTGCAGGA+AGG | 0.638606 | 1_2:-63057585 | Msa0083880:CDS |
| TGCATTTCTAGACCGTGAGG+AGG | 0.642936 | 1_2:-63055852 | Msa0083880:three_prime_UTR |
| TCGAGGGAGGTCTTCCGATG+AGG | 0.649068 | 1_2:-63056128 | Msa0083880:CDS |
| TGGCGGAGATGACAATGGAG+AGG | 0.649352 | 1_2:+63057824 | None:intergenic |
| AAGCATCAACACGATGATGG+TGG | 0.656376 | 1_2:-63057615 | Msa0083880:CDS |
| TGGTAGTTGTAACCTCCTCA+CGG | 0.660430 | 1_2:+63055840 | None:intergenic |
| TGGAATGAAAGGAAGGCTCG+AGG | 0.662530 | 1_2:-63056145 | Msa0083880:CDS |
| TCTTCCGATGAGGATGGTGA+GGG | 0.672492 | 1_2:-63056118 | Msa0083880:CDS |
| TTGATTTCTCTATGCAGTGG+CGG | 0.675125 | 1_2:+63057807 | None:intergenic |
| ATGAAAGGAAGGCTCGAGGG+AGG | 0.675624 | 1_2:-63056141 | Msa0083880:CDS |
| TACTCTTTGATATTACCAAG+GGG | 0.704126 | 1_2:-63055959 | Msa0083880:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTGTCTATATAAATA+TGG | + | chr1_2:63057154-63057173 | None:intergenic | 10.0% |
| !!! | GTTTTTAATGAAATTTTTTT+TGG | + | chr1_2:63057514-63057533 | None:intergenic | 10.0% |
| !! | TAAAATTGTCTATATAAATA+TGG | + | chr1_2:63057154-63057173 | None:intergenic | 10.0% |
| !!! | GTTTTTAATGAAATTTTTTT+TGG | + | chr1_2:63057514-63057533 | None:intergenic | 10.0% |
| !! | ACTTTAAATTATTTATAGGT+AGG | + | chr1_2:63055866-63055885 | None:intergenic | 15.0% |
| !! | TGCAACTTTAAATTATTTAT+AGG | + | chr1_2:63055870-63055889 | None:intergenic | 15.0% |
| !! | GAAAATTGAAATTGAAATTA+GGG | + | chr1_2:63056080-63056099 | None:intergenic | 15.0% |
| !! | TGAAAATTGAAATTGAAATT+AGG | + | chr1_2:63056081-63056100 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGATTTTTAGTTC+AGG | - | chr1_2:63056368-63056387 | Msa0083880:intron | 15.0% |
| !!! | TTTTTTTGATTTTTAGTTCA+GGG | - | chr1_2:63056369-63056388 | Msa0083880:intron | 15.0% |
| !! | ATGTATGTATTTATGAAATT+AGG | - | chr1_2:63056419-63056438 | Msa0083880:intron | 15.0% |
| !! | TGTATGTATTTATGAAATTA+GGG | - | chr1_2:63056420-63056439 | Msa0083880:intron | 15.0% |
| !!! | TCTTACAAATTTTAAAACTT+TGG | - | chr1_2:63056455-63056474 | Msa0083880:intron | 15.0% |
| !!! | TATATAGACAATTTTATGTA+TGG | - | chr1_2:63057158-63057177 | Msa0083880:intron | 15.0% |
| !!! | TAGAAATAGAAAGATTATTT+TGG | + | chr1_2:63057875-63057894 | None:intergenic | 15.0% |
| !! | ACTTTAAATTATTTATAGGT+AGG | + | chr1_2:63055866-63055885 | None:intergenic | 15.0% |
| !! | TGCAACTTTAAATTATTTAT+AGG | + | chr1_2:63055870-63055889 | None:intergenic | 15.0% |
| !! | GAAAATTGAAATTGAAATTA+GGG | + | chr1_2:63056080-63056099 | None:intergenic | 15.0% |
| !! | TGAAAATTGAAATTGAAATT+AGG | + | chr1_2:63056081-63056100 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGATTTTTAGTTC+AGG | - | chr1_2:63056368-63056387 | Msa0083880:intron | 15.0% |
| !!! | TTTTTTTGATTTTTAGTTCA+GGG | - | chr1_2:63056369-63056388 | Msa0083880:intron | 15.0% |
| !! | ATGTATGTATTTATGAAATT+AGG | - | chr1_2:63056419-63056438 | Msa0083880:intron | 15.0% |
| !! | TGTATGTATTTATGAAATTA+GGG | - | chr1_2:63056420-63056439 | Msa0083880:intron | 15.0% |
| !!! | TCTTACAAATTTTAAAACTT+TGG | - | chr1_2:63056455-63056474 | Msa0083880:intron | 15.0% |
| !!! | TATATAGACAATTTTATGTA+TGG | - | chr1_2:63057158-63057177 | Msa0083880:intron | 15.0% |
| !!! | TAGAAATAGAAAGATTATTT+TGG | + | chr1_2:63057875-63057894 | None:intergenic | 15.0% |
| !!! | TATTTATGAAATTAGGGTTT+TGG | - | chr1_2:63056426-63056445 | Msa0083880:intron | 20.0% |
| !!! | ATTTATGAAATTAGGGTTTT+GGG | - | chr1_2:63056427-63056446 | Msa0083880:intron | 20.0% |
| !!! | TTTTAAAACTTTGGAAAGAT+AGG | - | chr1_2:63056464-63056483 | Msa0083880:intron | 20.0% |
| !!! | TTTAAAACTTTGGAAAGATA+GGG | - | chr1_2:63056465-63056484 | Msa0083880:intron | 20.0% |
| !!! | ATGAATGTAATCATATGTTT+TGG | - | chr1_2:63056639-63056658 | Msa0083880:intron | 20.0% |
| !! | GAACAATATTAAGATATGAA+TGG | - | chr1_2:63056748-63056767 | Msa0083880:intron | 20.0% |
| !! | TAACAAAAATAAGTTGTTCT+TGG | - | chr1_2:63057264-63057283 | Msa0083880:intron | 20.0% |
| !!! | TTTTCTAAAGAGTAAAATGT+TGG | - | chr1_2:63057762-63057781 | Msa0083880:CDS | 20.0% |
| !!! | TATTTATGAAATTAGGGTTT+TGG | - | chr1_2:63056426-63056445 | Msa0083880:intron | 20.0% |
| !!! | ATTTATGAAATTAGGGTTTT+GGG | - | chr1_2:63056427-63056446 | Msa0083880:intron | 20.0% |
| !!! | TTTTAAAACTTTGGAAAGAT+AGG | - | chr1_2:63056464-63056483 | Msa0083880:intron | 20.0% |
| !!! | TTTAAAACTTTGGAAAGATA+GGG | - | chr1_2:63056465-63056484 | Msa0083880:intron | 20.0% |
| !!! | ATGAATGTAATCATATGTTT+TGG | - | chr1_2:63056639-63056658 | Msa0083880:intron | 20.0% |
| !! | GAACAATATTAAGATATGAA+TGG | - | chr1_2:63056748-63056767 | Msa0083880:intron | 20.0% |
| !! | TAACAAAAATAAGTTGTTCT+TGG | - | chr1_2:63057264-63057283 | Msa0083880:intron | 20.0% |
| !!! | TTTTCTAAAGAGTAAAATGT+TGG | - | chr1_2:63057762-63057781 | Msa0083880:CDS | 20.0% |
| ! | AAATTGAAATTAGGGAAGAA+AGG | + | chr1_2:63056072-63056091 | None:intergenic | 25.0% |
| !! | TTCTGTGAATTTGAAATTGT+TGG | - | chr1_2:63056334-63056353 | Msa0083880:intron | 25.0% |
| !! | TGAATTTGAAATTGTTGGTT+AGG | - | chr1_2:63056339-63056358 | Msa0083880:intron | 25.0% |
| !! | TTTATGAAATTAGGGTTTTG+GGG | - | chr1_2:63056428-63056447 | Msa0083880:intron | 25.0% |
| !!! | TGTTTTTTGTTTTGTGATTG+AGG | - | chr1_2:63056512-63056531 | Msa0083880:intron | 25.0% |
| ! | AAAGTTGGATAACATAGAAA+TGG | - | chr1_2:63056700-63056719 | Msa0083880:intron | 25.0% |
| ! | AAGTTGGATAACATAGAAAT+GGG | - | chr1_2:63056701-63056720 | Msa0083880:intron | 25.0% |
| ! | GCAAAAACGAATAAACAAAA+AGG | + | chr1_2:63056806-63056825 | None:intergenic | 25.0% |
| !! | TTAATTTAGTTTCTCTAGTC+AGG | - | chr1_2:63057027-63057046 | Msa0083880:intron | 25.0% |
| ! | AAAATAAGTTGTTCTTGGTT+TGG | - | chr1_2:63057269-63057288 | Msa0083880:intron | 25.0% |
| !!! | TTGACAGTTTTATGAACTTA+AGG | - | chr1_2:63057387-63057406 | Msa0083880:intron | 25.0% |
| ! | AACATGTACATATGATTACA+TGG | - | chr1_2:63057426-63057445 | Msa0083880:intron | 25.0% |
| !! | ACAATATTGAAAGTATAGCA+AGG | + | chr1_2:63057483-63057502 | None:intergenic | 25.0% |
| !! | TCTTTATTTCAAGATGGATT+TGG | - | chr1_2:63057573-63057592 | Msa0083880:CDS | 25.0% |
| !! | CTTTATTTCAAGATGGATTT+GGG | - | chr1_2:63057574-63057593 | Msa0083880:CDS | 25.0% |
| ! | ATACTCTTTGATATTACCAA+GGG | - | chr1_2:63057787-63057806 | Msa0083880:exon | 25.0% |
| ! | AAATTGAAATTAGGGAAGAA+AGG | + | chr1_2:63056072-63056091 | None:intergenic | 25.0% |
| !! | TTCTGTGAATTTGAAATTGT+TGG | - | chr1_2:63056334-63056353 | Msa0083880:intron | 25.0% |
| !! | TGAATTTGAAATTGTTGGTT+AGG | - | chr1_2:63056339-63056358 | Msa0083880:intron | 25.0% |
| !! | TTTATGAAATTAGGGTTTTG+GGG | - | chr1_2:63056428-63056447 | Msa0083880:intron | 25.0% |
| !!! | TGTTTTTTGTTTTGTGATTG+AGG | - | chr1_2:63056512-63056531 | Msa0083880:intron | 25.0% |
| ! | AAAGTTGGATAACATAGAAA+TGG | - | chr1_2:63056700-63056719 | Msa0083880:intron | 25.0% |
| ! | AAGTTGGATAACATAGAAAT+GGG | - | chr1_2:63056701-63056720 | Msa0083880:intron | 25.0% |
| ! | GCAAAAACGAATAAACAAAA+AGG | + | chr1_2:63056806-63056825 | None:intergenic | 25.0% |
| !! | TTAATTTAGTTTCTCTAGTC+AGG | - | chr1_2:63057027-63057046 | Msa0083880:intron | 25.0% |
| ! | AAAATAAGTTGTTCTTGGTT+TGG | - | chr1_2:63057269-63057288 | Msa0083880:intron | 25.0% |
| !!! | TTGACAGTTTTATGAACTTA+AGG | - | chr1_2:63057387-63057406 | Msa0083880:intron | 25.0% |
| ! | AACATGTACATATGATTACA+TGG | - | chr1_2:63057426-63057445 | Msa0083880:intron | 25.0% |
| !! | ACAATATTGAAAGTATAGCA+AGG | + | chr1_2:63057483-63057502 | None:intergenic | 25.0% |
| !! | TCTTTATTTCAAGATGGATT+TGG | - | chr1_2:63057573-63057592 | Msa0083880:CDS | 25.0% |
| !! | CTTTATTTCAAGATGGATTT+GGG | - | chr1_2:63057574-63057593 | Msa0083880:CDS | 25.0% |
| ! | ATACTCTTTGATATTACCAA+GGG | - | chr1_2:63057787-63057806 | Msa0083880:exon | 25.0% |
| TTGTCGAGTAGTAGTAATTT+GGG | + | chr1_2:63055989-63056008 | None:intergenic | 30.0% | |
| ! | AAAGGAAGAAAGGGATTTTT+GGG | + | chr1_2:63056054-63056073 | None:intergenic | 30.0% |
| TAAGAACAAACCAAAATTGC+AGG | - | chr1_2:63056158-63056177 | Msa0083880:CDS | 30.0% | |
| ! | TATGAGAGGATTAGAAGTTT+TGG | + | chr1_2:63056283-63056302 | None:intergenic | 30.0% |
| ! | GAACCAATTGATTGATTCAA+GGG | - | chr1_2:63056487-63056506 | Msa0083880:intron | 30.0% |
| !!! | TTTTGTTTTGTGATTGAGGA+AGG | - | chr1_2:63056516-63056535 | Msa0083880:intron | 30.0% |
| AAGAACCAACTAAAACACAA+GGG | + | chr1_2:63056544-63056563 | None:intergenic | 30.0% | |
| AAAGAACCAACTAAAACACA+AGG | + | chr1_2:63056545-63056564 | None:intergenic | 30.0% | |
| TGGTTTGATTCAATTAGTTG+TGG | - | chr1_2:63056768-63056787 | Msa0083880:intron | 30.0% | |
| GGTTTGATTCAATTAGTTGT+GGG | - | chr1_2:63056769-63056788 | Msa0083880:intron | 30.0% | |
| TAAACAAAAAGGATACACGA+AGG | + | chr1_2:63056795-63056814 | None:intergenic | 30.0% | |
| TATTCTCATAACATGTCCAA+AGG | - | chr1_2:63056919-63056938 | Msa0083880:intron | 30.0% | |
| ! | TGACTACTATACTTCTAAGA+AGG | - | chr1_2:63057090-63057109 | Msa0083880:intron | 30.0% |
| GGAATGAAATCCTTAATCAA+AGG | + | chr1_2:63057188-63057207 | None:intergenic | 30.0% | |
| TGTACATATGATTACATGGA+TGG | - | chr1_2:63057430-63057449 | Msa0083880:intron | 30.0% | |
| !!! | TGTTTTCAGGTTTATGCAAT+AGG | - | chr1_2:63057545-63057564 | Msa0083880:CDS | 30.0% |
| ! | GAGCATTCTTTATTTCAAGA+TGG | - | chr1_2:63057567-63057586 | Msa0083880:CDS | 30.0% |
| TGTCACATTCTATGTTTGAA+AGG | - | chr1_2:63057727-63057746 | Msa0083880:CDS | 30.0% | |
| GATACTCTTTGATATTACCA+AGG | - | chr1_2:63057786-63057805 | Msa0083880:exon | 30.0% | |
| TACTCTTTGATATTACCAAG+GGG | - | chr1_2:63057788-63057807 | Msa0083880:exon | 30.0% | |
| TTGTCGAGTAGTAGTAATTT+GGG | + | chr1_2:63055989-63056008 | None:intergenic | 30.0% | |
| ! | AAAGGAAGAAAGGGATTTTT+GGG | + | chr1_2:63056054-63056073 | None:intergenic | 30.0% |
| TAAGAACAAACCAAAATTGC+AGG | - | chr1_2:63056158-63056177 | Msa0083880:CDS | 30.0% | |
| ! | TATGAGAGGATTAGAAGTTT+TGG | + | chr1_2:63056283-63056302 | None:intergenic | 30.0% |
| ! | GAACCAATTGATTGATTCAA+GGG | - | chr1_2:63056487-63056506 | Msa0083880:intron | 30.0% |
| !!! | TTTTGTTTTGTGATTGAGGA+AGG | - | chr1_2:63056516-63056535 | Msa0083880:intron | 30.0% |
| AAGAACCAACTAAAACACAA+GGG | + | chr1_2:63056544-63056563 | None:intergenic | 30.0% | |
| AAAGAACCAACTAAAACACA+AGG | + | chr1_2:63056545-63056564 | None:intergenic | 30.0% | |
| TGGTTTGATTCAATTAGTTG+TGG | - | chr1_2:63056768-63056787 | Msa0083880:intron | 30.0% | |
| GGTTTGATTCAATTAGTTGT+GGG | - | chr1_2:63056769-63056788 | Msa0083880:intron | 30.0% | |
| TAAACAAAAAGGATACACGA+AGG | + | chr1_2:63056795-63056814 | None:intergenic | 30.0% | |
| TATTCTCATAACATGTCCAA+AGG | - | chr1_2:63056919-63056938 | Msa0083880:intron | 30.0% | |
| ! | TGACTACTATACTTCTAAGA+AGG | - | chr1_2:63057090-63057109 | Msa0083880:intron | 30.0% |
| GGAATGAAATCCTTAATCAA+AGG | + | chr1_2:63057188-63057207 | None:intergenic | 30.0% | |
| TGTACATATGATTACATGGA+TGG | - | chr1_2:63057430-63057449 | Msa0083880:intron | 30.0% | |
| !!! | TGTTTTCAGGTTTATGCAAT+AGG | - | chr1_2:63057545-63057564 | Msa0083880:CDS | 30.0% |
| ! | GAGCATTCTTTATTTCAAGA+TGG | - | chr1_2:63057567-63057586 | Msa0083880:CDS | 30.0% |
| TGTCACATTCTATGTTTGAA+AGG | - | chr1_2:63057727-63057746 | Msa0083880:CDS | 30.0% | |
| GATACTCTTTGATATTACCA+AGG | - | chr1_2:63057786-63057805 | Msa0083880:exon | 30.0% | |
| TACTCTTTGATATTACCAAG+GGG | - | chr1_2:63057788-63057807 | Msa0083880:exon | 30.0% | |
| ! | AGATTGATTTCTCTATGCAG+TGG | + | chr1_2:63055946-63055965 | None:intergenic | 35.0% |
| GTTGTCGAGTAGTAGTAATT+TGG | + | chr1_2:63055990-63056009 | None:intergenic | 35.0% | |
| ! | GAAAGGAAGAAAGGGATTTT+TGG | + | chr1_2:63056055-63056074 | None:intergenic | 35.0% |
| TTAGGGAAGAAAGGAAGAAA+GGG | + | chr1_2:63056063-63056082 | None:intergenic | 35.0% | |
| ATTAGGGAAGAAAGGAAGAA+AGG | + | chr1_2:63056064-63056083 | None:intergenic | 35.0% | |
| ! | GGTGGTAAGTTGAAAAAATG+AGG | + | chr1_2:63056108-63056127 | None:intergenic | 35.0% |
| !!! | TCATCGTGTTGATGCTTTTT+TGG | + | chr1_2:63056129-63056148 | None:intergenic | 35.0% |
| !! | AAAAAGCATCAACACGATGA+TGG | - | chr1_2:63056129-63056148 | Msa0083880:CDS | 35.0% |
| AACAAACCAAAATTGCAGGA+AGG | - | chr1_2:63056162-63056181 | Msa0083880:CDS | 35.0% | |
| TTCAGAAACAACAGCAAGTT+GGG | + | chr1_2:63056229-63056248 | None:intergenic | 35.0% | |
| TAATCCTCTCATACTCTATC+AGG | - | chr1_2:63056290-63056309 | Msa0083880:intron | 35.0% | |
| ! | GGAACCAATTGATTGATTCA+AGG | - | chr1_2:63056486-63056505 | Msa0083880:intron | 35.0% |
| ACACCCTTGAATCAATCAAT+TGG | + | chr1_2:63056493-63056512 | None:intergenic | 35.0% | |
| !!! | TAATCATATGTTTTGGCCAC+TGG | - | chr1_2:63056646-63056665 | Msa0083880:intron | 35.0% |
| AAGTGTCAGTGTTACAAAGT+TGG | - | chr1_2:63056685-63056704 | Msa0083880:intron | 35.0% | |
| TTGGATAACATAGAAATGGG+TGG | - | chr1_2:63056704-63056723 | Msa0083880:intron | 35.0% | |
| ACACAAACATAAGAAACACC+AGG | - | chr1_2:63056878-63056897 | Msa0083880:intron | 35.0% | |
| CAAAAAGCCCTAGTTAGTTA+CGG | - | chr1_2:63056988-63057007 | Msa0083880:intron | 35.0% | |
| TAGTTTCTCTAGTCAGGATA+TGG | - | chr1_2:63057033-63057052 | Msa0083880:intron | 35.0% | |
| ! | GTATGGACTACCTTTGATTA+AGG | - | chr1_2:63057175-63057194 | Msa0083880:intron | 35.0% |
| CATAACGAAATTTCCAGGTT+CGG | + | chr1_2:63057226-63057245 | None:intergenic | 35.0% | |
| ACAGACATAACGAAATTTCC+AGG | + | chr1_2:63057231-63057250 | None:intergenic | 35.0% | |
| ! | AGTCCAAAAGAATCAGCTTT+TGG | - | chr1_2:63057297-63057316 | Msa0083880:intron | 35.0% |
| ! | GTCCAAAAGAATCAGCTTTT+GGG | - | chr1_2:63057298-63057317 | Msa0083880:intron | 35.0% |
| ! | ACGTTACTGCAATTGTTTTC+AGG | - | chr1_2:63057532-63057551 | Msa0083880:CDS | 35.0% |
| ! | AGATTGATTTCTCTATGCAG+TGG | + | chr1_2:63055946-63055965 | None:intergenic | 35.0% |
| GTTGTCGAGTAGTAGTAATT+TGG | + | chr1_2:63055990-63056009 | None:intergenic | 35.0% | |
| ! | GAAAGGAAGAAAGGGATTTT+TGG | + | chr1_2:63056055-63056074 | None:intergenic | 35.0% |
| TTAGGGAAGAAAGGAAGAAA+GGG | + | chr1_2:63056063-63056082 | None:intergenic | 35.0% | |
| ATTAGGGAAGAAAGGAAGAA+AGG | + | chr1_2:63056064-63056083 | None:intergenic | 35.0% | |
| ! | GGTGGTAAGTTGAAAAAATG+AGG | + | chr1_2:63056108-63056127 | None:intergenic | 35.0% |
| !!! | TCATCGTGTTGATGCTTTTT+TGG | + | chr1_2:63056129-63056148 | None:intergenic | 35.0% |
| !! | AAAAAGCATCAACACGATGA+TGG | - | chr1_2:63056129-63056148 | Msa0083880:CDS | 35.0% |
| AACAAACCAAAATTGCAGGA+AGG | - | chr1_2:63056162-63056181 | Msa0083880:CDS | 35.0% | |
| TTCAGAAACAACAGCAAGTT+GGG | + | chr1_2:63056229-63056248 | None:intergenic | 35.0% | |
| TAATCCTCTCATACTCTATC+AGG | - | chr1_2:63056290-63056309 | Msa0083880:intron | 35.0% | |
| ! | GGAACCAATTGATTGATTCA+AGG | - | chr1_2:63056486-63056505 | Msa0083880:intron | 35.0% |
| ACACCCTTGAATCAATCAAT+TGG | + | chr1_2:63056493-63056512 | None:intergenic | 35.0% | |
| !!! | TAATCATATGTTTTGGCCAC+TGG | - | chr1_2:63056646-63056665 | Msa0083880:intron | 35.0% |
| AAGTGTCAGTGTTACAAAGT+TGG | - | chr1_2:63056685-63056704 | Msa0083880:intron | 35.0% | |
| TTGGATAACATAGAAATGGG+TGG | - | chr1_2:63056704-63056723 | Msa0083880:intron | 35.0% | |
| ACACAAACATAAGAAACACC+AGG | - | chr1_2:63056878-63056897 | Msa0083880:intron | 35.0% | |
| CAAAAAGCCCTAGTTAGTTA+CGG | - | chr1_2:63056988-63057007 | Msa0083880:intron | 35.0% | |
| TAGTTTCTCTAGTCAGGATA+TGG | - | chr1_2:63057033-63057052 | Msa0083880:intron | 35.0% | |
| ! | GTATGGACTACCTTTGATTA+AGG | - | chr1_2:63057175-63057194 | Msa0083880:intron | 35.0% |
| CATAACGAAATTTCCAGGTT+CGG | + | chr1_2:63057226-63057245 | None:intergenic | 35.0% | |
| ACAGACATAACGAAATTTCC+AGG | + | chr1_2:63057231-63057250 | None:intergenic | 35.0% | |
| ! | AGTCCAAAAGAATCAGCTTT+TGG | - | chr1_2:63057297-63057316 | Msa0083880:intron | 35.0% |
| ! | GTCCAAAAGAATCAGCTTTT+GGG | - | chr1_2:63057298-63057317 | Msa0083880:intron | 35.0% |
| ! | ACGTTACTGCAATTGTTTTC+AGG | - | chr1_2:63057532-63057551 | Msa0083880:CDS | 35.0% |
| TTGATTTCTCTATGCAGTGG+CGG | + | chr1_2:63055943-63055962 | None:intergenic | 40.0% | |
| TCGAGTAGTAGTAATTTGGG+TGG | + | chr1_2:63055986-63056005 | None:intergenic | 40.0% | |
| !!! | TCGTGTTGATGCTTTTTTGG+TGG | + | chr1_2:63056126-63056145 | None:intergenic | 40.0% |
| AAACCAAAATTGCAGGAAGG+AGG | - | chr1_2:63056165-63056184 | Msa0083880:CDS | 40.0% | |
| !! | ACAACAGCAAGTTGGGTTTT+GGG | + | chr1_2:63056222-63056241 | None:intergenic | 40.0% |
| !! | AACAACAGCAAGTTGGGTTT+TGG | + | chr1_2:63056223-63056242 | None:intergenic | 40.0% |
| GTTCAGAAACAACAGCAAGT+TGG | + | chr1_2:63056230-63056249 | None:intergenic | 40.0% | |
| !! | TGTTGTTTCTGAACCTCTTC+AGG | - | chr1_2:63056236-63056255 | Msa0083880:intron | 40.0% |
| ATTTCAGATTCAGCCTGAAG+AGG | + | chr1_2:63056252-63056271 | None:intergenic | 40.0% | |
| AGTACCTGATAGAGTATGAG+AGG | + | chr1_2:63056297-63056316 | None:intergenic | 40.0% | |
| !!! | AGGAACCCTTGTGTTTTAGT+TGG | - | chr1_2:63056536-63056555 | Msa0083880:intron | 40.0% |
| ATAACATGTCCAAAGGACTC+AGG | - | chr1_2:63056926-63056945 | Msa0083880:intron | 40.0% | |
| ! | CGTAACTAACTAGGGCTTTT+TGG | + | chr1_2:63056990-63057009 | None:intergenic | 40.0% |
| TAACCTGCCGTAACTAACTA+GGG | + | chr1_2:63056998-63057017 | None:intergenic | 40.0% | |
| !! | GTCCCAAAAGCTGATTCTTT+TGG | + | chr1_2:63057303-63057322 | None:intergenic | 40.0% |
| CTTAGCTTAGATAGGGAAAC+AGG | + | chr1_2:63057460-63057479 | None:intergenic | 40.0% | |
| AGCAAGGCTTAGCTTAGATA+GGG | + | chr1_2:63057467-63057486 | None:intergenic | 40.0% | |
| TAGCAAGGCTTAGCTTAGAT+AGG | + | chr1_2:63057468-63057487 | None:intergenic | 40.0% | |
| ! | TTTCAAGATGGATTTGGGCA+AGG | - | chr1_2:63057579-63057598 | Msa0083880:CDS | 40.0% |
| TCTTTGATATTACCAAGGGG+TGG | - | chr1_2:63057791-63057810 | Msa0083880:exon | 40.0% | |
| TTGATTTCTCTATGCAGTGG+CGG | + | chr1_2:63055943-63055962 | None:intergenic | 40.0% | |
| TCGAGTAGTAGTAATTTGGG+TGG | + | chr1_2:63055986-63056005 | None:intergenic | 40.0% | |
| !!! | TCGTGTTGATGCTTTTTTGG+TGG | + | chr1_2:63056126-63056145 | None:intergenic | 40.0% |
| AAACCAAAATTGCAGGAAGG+AGG | - | chr1_2:63056165-63056184 | Msa0083880:CDS | 40.0% | |
| !! | ACAACAGCAAGTTGGGTTTT+GGG | + | chr1_2:63056222-63056241 | None:intergenic | 40.0% |
| !! | AACAACAGCAAGTTGGGTTT+TGG | + | chr1_2:63056223-63056242 | None:intergenic | 40.0% |
| GTTCAGAAACAACAGCAAGT+TGG | + | chr1_2:63056230-63056249 | None:intergenic | 40.0% | |
| !! | TGTTGTTTCTGAACCTCTTC+AGG | - | chr1_2:63056236-63056255 | Msa0083880:intron | 40.0% |
| ATTTCAGATTCAGCCTGAAG+AGG | + | chr1_2:63056252-63056271 | None:intergenic | 40.0% | |
| AGTACCTGATAGAGTATGAG+AGG | + | chr1_2:63056297-63056316 | None:intergenic | 40.0% | |
| !!! | AGGAACCCTTGTGTTTTAGT+TGG | - | chr1_2:63056536-63056555 | Msa0083880:intron | 40.0% |
| ATAACATGTCCAAAGGACTC+AGG | - | chr1_2:63056926-63056945 | Msa0083880:intron | 40.0% | |
| ! | CGTAACTAACTAGGGCTTTT+TGG | + | chr1_2:63056990-63057009 | None:intergenic | 40.0% |
| TAACCTGCCGTAACTAACTA+GGG | + | chr1_2:63056998-63057017 | None:intergenic | 40.0% | |
| !! | GTCCCAAAAGCTGATTCTTT+TGG | + | chr1_2:63057303-63057322 | None:intergenic | 40.0% |
| CTTAGCTTAGATAGGGAAAC+AGG | + | chr1_2:63057460-63057479 | None:intergenic | 40.0% | |
| AGCAAGGCTTAGCTTAGATA+GGG | + | chr1_2:63057467-63057486 | None:intergenic | 40.0% | |
| TAGCAAGGCTTAGCTTAGAT+AGG | + | chr1_2:63057468-63057487 | None:intergenic | 40.0% | |
| ! | TTTCAAGATGGATTTGGGCA+AGG | - | chr1_2:63057579-63057598 | Msa0083880:CDS | 40.0% |
| TCTTTGATATTACCAAGGGG+TGG | - | chr1_2:63057791-63057810 | Msa0083880:exon | 40.0% | |
| ATGGAGAGGGAAGAGGAATT+TGG | + | chr1_2:63055912-63055931 | None:intergenic | 45.0% | |
| ! | AAGCATCAACACGATGATGG+TGG | - | chr1_2:63056132-63056151 | Msa0083880:CDS | 45.0% |
| TTGGGGAAAGTCACAACGTT+GGG | + | chr1_2:63056204-63056223 | None:intergenic | 45.0% | |
| TTTGGGGAAAGTCACAACGT+TGG | + | chr1_2:63056205-63056224 | None:intergenic | 45.0% | |
| !! | CAACAGCAAGTTGGGTTTTG+GGG | + | chr1_2:63056221-63056240 | None:intergenic | 45.0% |
| ATGATTGAACGCGTATCCAG+TGG | + | chr1_2:63056665-63056684 | None:intergenic | 45.0% | |
| AACACCAGGTTTGTCTAGTC+AGG | - | chr1_2:63056892-63056911 | Msa0083880:intron | 45.0% | |
| ATCTCCTGACTAGACAAACC+TGG | + | chr1_2:63056899-63056918 | None:intergenic | 45.0% | |
| GATATCCTACGCGTCTACTA+GGG | - | chr1_2:63056962-63056981 | Msa0083880:intron | 45.0% | |
| CTAACCTGCCGTAACTAACT+AGG | + | chr1_2:63056999-63057018 | None:intergenic | 45.0% | |
| ! | GTTCGGTGATCATGACGATA+AGG | + | chr1_2:63057209-63057228 | None:intergenic | 45.0% |
| TCGTTATGTCTGTGTCTCTG+TGG | - | chr1_2:63057238-63057257 | Msa0083880:intron | 45.0% | |
| TTTGGGCAAGGTGGAATGAA+AGG | - | chr1_2:63057591-63057610 | Msa0083880:CDS | 45.0% | |
| TGATATTACCAAGGGGTGGT+TGG | - | chr1_2:63057795-63057814 | Msa0083880:exon | 45.0% | |
| GATATATACCAACCACCCCT+TGG | + | chr1_2:63057806-63057825 | None:intergenic | 45.0% | |
| ! | CTATGCATTTCTAGACCGTG+AGG | - | chr1_2:63057892-63057911 | Msa0083880:five_prime_UTR | 45.0% |
| ATGGAGAGGGAAGAGGAATT+TGG | + | chr1_2:63055912-63055931 | None:intergenic | 45.0% | |
| ! | AAGCATCAACACGATGATGG+TGG | - | chr1_2:63056132-63056151 | Msa0083880:CDS | 45.0% |
| TTGGGGAAAGTCACAACGTT+GGG | + | chr1_2:63056204-63056223 | None:intergenic | 45.0% | |
| TTTGGGGAAAGTCACAACGT+TGG | + | chr1_2:63056205-63056224 | None:intergenic | 45.0% | |
| !! | CAACAGCAAGTTGGGTTTTG+GGG | + | chr1_2:63056221-63056240 | None:intergenic | 45.0% |
| ATGATTGAACGCGTATCCAG+TGG | + | chr1_2:63056665-63056684 | None:intergenic | 45.0% | |
| AACACCAGGTTTGTCTAGTC+AGG | - | chr1_2:63056892-63056911 | Msa0083880:intron | 45.0% | |
| ATCTCCTGACTAGACAAACC+TGG | + | chr1_2:63056899-63056918 | None:intergenic | 45.0% | |
| GATATCCTACGCGTCTACTA+GGG | - | chr1_2:63056962-63056981 | Msa0083880:intron | 45.0% | |
| CTAACCTGCCGTAACTAACT+AGG | + | chr1_2:63056999-63057018 | None:intergenic | 45.0% | |
| ! | GTTCGGTGATCATGACGATA+AGG | + | chr1_2:63057209-63057228 | None:intergenic | 45.0% |
| TCGTTATGTCTGTGTCTCTG+TGG | - | chr1_2:63057238-63057257 | Msa0083880:intron | 45.0% | |
| TTTGGGCAAGGTGGAATGAA+AGG | - | chr1_2:63057591-63057610 | Msa0083880:CDS | 45.0% | |
| TGATATTACCAAGGGGTGGT+TGG | - | chr1_2:63057795-63057814 | Msa0083880:exon | 45.0% | |
| GATATATACCAACCACCCCT+TGG | + | chr1_2:63057806-63057825 | None:intergenic | 45.0% | |
| ! | CTATGCATTTCTAGACCGTG+AGG | - | chr1_2:63057892-63057911 | Msa0083880:five_prime_UTR | 45.0% |
| !!! | TTTTTAATGAAATTTTTTTT+GGG | + | chr1_2:63057513-63057532 | None:intergenic | 5.0% |
| !!! | TTTTTAATGAAATTTTTTTT+GGG | + | chr1_2:63057513-63057532 | None:intergenic | 5.0% |
| GATGACAATGGAGAGGGAAG+AGG | + | chr1_2:63055919-63055938 | None:intergenic | 50.0% | |
| ! | CCTCCTCCTTCCTGCAATTT+TGG | + | chr1_2:63056171-63056190 | None:intergenic | 50.0% |
| CCAAAATTGCAGGAAGGAGG+AGG | - | chr1_2:63056168-63056187 | Msa0083880:CDS | 50.0% | |
| AAATTGCAGGAAGGAGGAGG+AGG | - | chr1_2:63056171-63056190 | Msa0083880:CDS | 50.0% | |
| TCCAAAGGACTCAGGTGTGT+GGG | - | chr1_2:63056934-63056953 | Msa0083880:intron | 50.0% | |
| GGATATCCTACGCGTCTACT+AGG | - | chr1_2:63056961-63056980 | Msa0083880:intron | 50.0% | |
| AAGCCCTAGTTAGTTACGGC+AGG | - | chr1_2:63056992-63057011 | Msa0083880:intron | 50.0% | |
| ATCGTCATGATCACCGAACC+TGG | - | chr1_2:63057210-63057229 | Msa0083880:intron | 50.0% | |
| ! | CAAGATGGATTTGGGCAAGG+TGG | - | chr1_2:63057582-63057601 | Msa0083880:CDS | 50.0% |
| GGCAAGGTGGAATGAAAGGA+AGG | - | chr1_2:63057595-63057614 | Msa0083880:CDS | 50.0% | |
| TGGAATGAAAGGAAGGCTCG+AGG | - | chr1_2:63057602-63057621 | Msa0083880:CDS | 50.0% | |
| GGAATGAAAGGAAGGCTCGA+GGG | - | chr1_2:63057603-63057622 | Msa0083880:CDS | 50.0% | |
| TCTTCCGATGAGGATGGTGA+GGG | - | chr1_2:63057629-63057648 | Msa0083880:CDS | 50.0% | |
| ATCACCCTCACCATCCTCAT+CGG | + | chr1_2:63057636-63057655 | None:intergenic | 50.0% | |
| ! | TGCATTTCTAGACCGTGAGG+AGG | - | chr1_2:63057895-63057914 | Msa0083880:five_prime_UTR | 50.0% |
| GATGACAATGGAGAGGGAAG+AGG | + | chr1_2:63055919-63055938 | None:intergenic | 50.0% | |
| ! | CCTCCTCCTTCCTGCAATTT+TGG | + | chr1_2:63056171-63056190 | None:intergenic | 50.0% |
| CCAAAATTGCAGGAAGGAGG+AGG | - | chr1_2:63056168-63056187 | Msa0083880:CDS | 50.0% | |
| AAATTGCAGGAAGGAGGAGG+AGG | - | chr1_2:63056171-63056190 | Msa0083880:CDS | 50.0% | |
| TCCAAAGGACTCAGGTGTGT+GGG | - | chr1_2:63056934-63056953 | Msa0083880:intron | 50.0% | |
| GGATATCCTACGCGTCTACT+AGG | - | chr1_2:63056961-63056980 | Msa0083880:intron | 50.0% | |
| AAGCCCTAGTTAGTTACGGC+AGG | - | chr1_2:63056992-63057011 | Msa0083880:intron | 50.0% | |
| ATCGTCATGATCACCGAACC+TGG | - | chr1_2:63057210-63057229 | Msa0083880:intron | 50.0% | |
| ! | CAAGATGGATTTGGGCAAGG+TGG | - | chr1_2:63057582-63057601 | Msa0083880:CDS | 50.0% |
| GGCAAGGTGGAATGAAAGGA+AGG | - | chr1_2:63057595-63057614 | Msa0083880:CDS | 50.0% | |
| TGGAATGAAAGGAAGGCTCG+AGG | - | chr1_2:63057602-63057621 | Msa0083880:CDS | 50.0% | |
| GGAATGAAAGGAAGGCTCGA+GGG | - | chr1_2:63057603-63057622 | Msa0083880:CDS | 50.0% | |
| TCTTCCGATGAGGATGGTGA+GGG | - | chr1_2:63057629-63057648 | Msa0083880:CDS | 50.0% | |
| ATCACCCTCACCATCCTCAT+CGG | + | chr1_2:63057636-63057655 | None:intergenic | 50.0% | |
| ! | TGCATTTCTAGACCGTGAGG+AGG | - | chr1_2:63057895-63057914 | Msa0083880:five_prime_UTR | 50.0% |
| GGCGGAGATGACAATGGAGA+GGG | + | chr1_2:63055925-63055944 | None:intergenic | 55.0% | |
| TGGCGGAGATGACAATGGAG+AGG | + | chr1_2:63055926-63055945 | None:intergenic | 55.0% | |
| ! | TGCAGTGGCGGAGATGACAA+TGG | + | chr1_2:63055931-63055950 | None:intergenic | 55.0% |
| !! | GGGTGATTCTGAAGCAGCAG+AGG | + | chr1_2:63056034-63056053 | None:intergenic | 55.0% |
| GTCCAAAGGACTCAGGTGTG+TGG | - | chr1_2:63056933-63056952 | Msa0083880:intron | 55.0% | |
| CCAAAGGACTCAGGTGTGTG+GGG | - | chr1_2:63056935-63056954 | Msa0083880:intron | 55.0% | |
| ATGAAAGGAAGGCTCGAGGG+AGG | - | chr1_2:63057606-63057625 | Msa0083880:CDS | 55.0% | |
| GTCTTCCGATGAGGATGGTG+AGG | - | chr1_2:63057628-63057647 | Msa0083880:CDS | 55.0% | |
| GATGAGGATGGTGAGGGTGA+TGG | - | chr1_2:63057635-63057654 | Msa0083880:CDS | 55.0% | |
| CTAGACCGTGAGGAGGTTAC+AGG | - | chr1_2:63057902-63057921 | Msa0083880:five_prime_UTR | 55.0% | |
| GGCGGAGATGACAATGGAGA+GGG | + | chr1_2:63055925-63055944 | None:intergenic | 55.0% | |
| TGGCGGAGATGACAATGGAG+AGG | + | chr1_2:63055926-63055945 | None:intergenic | 55.0% | |
| ! | TGCAGTGGCGGAGATGACAA+TGG | + | chr1_2:63055931-63055950 | None:intergenic | 55.0% |
| !! | GGGTGATTCTGAAGCAGCAG+AGG | + | chr1_2:63056034-63056053 | None:intergenic | 55.0% |
| GTCCAAAGGACTCAGGTGTG+TGG | - | chr1_2:63056933-63056952 | Msa0083880:intron | 55.0% | |
| CCAAAGGACTCAGGTGTGTG+GGG | - | chr1_2:63056935-63056954 | Msa0083880:intron | 55.0% | |
| ATGAAAGGAAGGCTCGAGGG+AGG | - | chr1_2:63057606-63057625 | Msa0083880:CDS | 55.0% | |
| GTCTTCCGATGAGGATGGTG+AGG | - | chr1_2:63057628-63057647 | Msa0083880:CDS | 55.0% | |
| GATGAGGATGGTGAGGGTGA+TGG | - | chr1_2:63057635-63057654 | Msa0083880:CDS | 55.0% | |
| CCCCACACACCTGAGTCCTT+TGG | + | chr1_2:63056938-63056957 | None:intergenic | 60.0% | |
| AGGACTCAGGTGTGTGGGGA+TGG | - | chr1_2:63056939-63056958 | Msa0083880:intron | 60.0% | |
| GGACTCAGGTGTGTGGGGAT+GGG | - | chr1_2:63056940-63056959 | Msa0083880:intron | 60.0% | |
| TGGCTCCCTAGTAGACGCGT+AGG | + | chr1_2:63056970-63056989 | None:intergenic | 60.0% | |
| TCGAGGGAGGTCTTCCGATG+AGG | - | chr1_2:63057619-63057638 | Msa0083880:CDS | 60.0% | |
| GGGAGGTCTTCCGATGAGGA+TGG | - | chr1_2:63057623-63057642 | Msa0083880:CDS | 60.0% | |
| ! | GATGGTGAGGGTGATGGTCG+TGG | - | chr1_2:63057641-63057660 | Msa0083880:CDS | 60.0% |
| ! | GGGTGATGGTCGTGGATCTC+AGG | - | chr1_2:63057649-63057668 | Msa0083880:CDS | 60.0% |
| CCCCACACACCTGAGTCCTT+TGG | + | chr1_2:63056938-63056957 | None:intergenic | 60.0% | |
| AGGACTCAGGTGTGTGGGGA+TGG | - | chr1_2:63056939-63056958 | Msa0083880:intron | 60.0% | |
| GGACTCAGGTGTGTGGGGAT+GGG | - | chr1_2:63056940-63056959 | Msa0083880:intron | 60.0% | |
| TGGCTCCCTAGTAGACGCGT+AGG | + | chr1_2:63056970-63056989 | None:intergenic | 60.0% | |
| TCGAGGGAGGTCTTCCGATG+AGG | - | chr1_2:63057619-63057638 | Msa0083880:CDS | 60.0% | |
| GGGAGGTCTTCCGATGAGGA+TGG | - | chr1_2:63057623-63057642 | Msa0083880:CDS | 60.0% | |
| ! | GATGGTGAGGGTGATGGTCG+TGG | - | chr1_2:63057641-63057660 | Msa0083880:CDS | 60.0% |
| ! | GGGTGATGGTCGTGGATCTC+AGG | - | chr1_2:63057649-63057668 | Msa0083880:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63055847 | 63057922 | 63055847 | ID=Msa0083880;Name=Msa0083880 |
| chr1_2 | mRNA | 63055847 | 63057922 | 63055847 | ID=Msa0083880-mRNA-1;Parent=Msa0083880;Name=Msa0083880-mRNA-1;_AED=0.02;_eAED=0.02;_QI=123|1|1|1|1|1|2|240|156 |
| chr1_2 | exon | 63055847 | 63056215 | 63055847 | ID=Msa0083880-mRNA-1:exon:21090;Parent=Msa0083880-mRNA-1 |
| chr1_2 | exon | 63057458 | 63057922 | 63057458 | ID=Msa0083880-mRNA-1:exon:21089;Parent=Msa0083880-mRNA-1 |
| chr1_2 | five_prime_UTR | 63057800 | 63057922 | 63057800 | ID=Msa0083880-mRNA-1:five_prime_utr;Parent=Msa0083880-mRNA-1 |
| chr1_2 | CDS | 63057458 | 63057799 | 63057458 | ID=Msa0083880-mRNA-1:cds;Parent=Msa0083880-mRNA-1 |
| chr1_2 | CDS | 63056087 | 63056215 | 63056087 | ID=Msa0083880-mRNA-1:cds;Parent=Msa0083880-mRNA-1 |
| chr1_2 | three_prime_UTR | 63055847 | 63056086 | 63055847 | ID=Msa0083880-mRNA-1:three_prime_utr;Parent=Msa0083880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
