Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098930 | XP_003588988.1 | 95.184 | 353 | 0 | 1 | 41 | 376 | 3 | 355 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098930 | sp|Q8H1Q2|NBP35_ARATH | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098930 | A0A396JFU3 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015090 | Msa0098930 | 0.817112 | 3.904831e-52 | -8.615850e-47 |
| Msa0049750 | Msa0098930 | 0.824240 | 8.983551e-54 | -8.615850e-47 |
| Msa0096700 | Msa0098930 | 0.931667 | 2.690867e-94 | -8.615850e-47 |
| Msa0098930 | Msa0098990 | 0.911866 | 3.742859e-83 | -8.615850e-47 |
| Msa0098930 | Msa0300150 | 0.824602 | 7.386120e-54 | -8.615850e-47 |
| Msa0098930 | Msa0308440 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0098930 | Msa0376600 | 0.812445 | 4.223652e-51 | -8.615850e-47 |
| Msa0098930 | Msa0403490 | 0.805430 | 1.339867e-49 | -8.615850e-47 |
| Msa0098930 | Msa0427580 | 0.821757 | 3.407902e-53 | -8.615850e-47 |
| Msa0098930 | Msa0481280 | 0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa0098930 | Msa0502090 | 0.807444 | 5.039451e-50 | -8.615850e-47 |
| Msa0098930 | Msa0588240 | 0.813769 | 2.164209e-51 | -8.615850e-47 |
| Msa0098930 | Msa0702370 | 0.806017 | 1.008814e-49 | -8.615850e-47 |
| Msa0098930 | Msa0765180 | 0.829506 | 4.955250e-55 | -8.615850e-47 |
| Msa0098930 | Msa0844610 | 0.800412 | 1.459169e-48 | -8.615850e-47 |
| Msa0098930 | Msa0970600 | 0.801113 | 1.049507e-48 | -8.615850e-47 |
| Msa0098930 | Msa1006730 | 0.803288 | 3.744509e-49 | -8.615850e-47 |
| Msa0098930 | Msa1107260 | 0.814904 | 1.214840e-51 | -8.615850e-47 |
| Msa0098930 | Msa1144040 | 0.803720 | 3.046842e-49 | -8.615850e-47 |
| Msa0098930 | Msa1150900 | 0.803520 | 3.352339e-49 | -8.615850e-47 |
| Msa0098930 | Msa1163870 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
| Msa0098930 | Msa1185460 | 0.809189 | 2.139895e-50 | -8.615850e-47 |
| Msa0098930 | Msa1208370 | 0.854286 | 1.362018e-61 | -8.615850e-47 |
| Msa0098930 | Msa1208380 | 0.806532 | 7.857581e-50 | -8.615850e-47 |
| Msa0098930 | Msa1209190 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0098930 | Msa1437330 | 0.800239 | 1.582283e-48 | -8.615850e-47 |
| Msa0098930 | Msa1438840 | 0.811687 | 6.179863e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098930 | MtrunA17_Chr1g0151421 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
| Msa0098930 | MtrunA17_Chr1g0153571 | 94.618 | 353 | 2 | 1 | 41 | 376 | 3 | 355 | 0.0 | 672 |
| Msa0098930 | MtrunA17_Chr1g0184451 | 34.564 | 298 | 143 | 10 | 75 | 364 | 17 | 270 | 1.12e-41 | 147 |
| Msa0098930 | MtrunA17_Chr6g0485031 | 40.000 | 180 | 103 | 3 | 76 | 255 | 173 | 347 | 5.73e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098930 | AT5G50960.1 | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
| Msa0098930 | AT4G19540.1 | 43.005 | 193 | 100 | 5 | 75 | 264 | 38 | 223 | 7.37e-38 | 139 |
| Msa0098930 | AT3G24430.1 | 39.444 | 180 | 104 | 3 | 76 | 255 | 172 | 346 | 4.49e-31 | 124 |
Find 99 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1_3:-4941384 | None:intergenic |
| CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1_3:-4940883 | None:intergenic |
| TACATAAGGTTATTATTATA+AGG | 0.233405 | 1_3:+4941973 | Msa0098930:three_prime_UTR |
| GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1_3:-4940897 | None:intergenic |
| ATAATTCTTTCAAACACTTC+TGG | 0.300011 | 1_3:-4941928 | None:intergenic |
| ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1_3:+4940995 | Msa0098930:CDS |
| TTTATGAAGATTACAGATAA+TGG | 0.328286 | 1_3:+4941309 | Msa0098930:CDS |
| GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1_3:+4941459 | Msa0098930:CDS |
| AATCTCGGGGTCATGTCAAT+TGG | 0.348522 | 1_3:+4940958 | Msa0098930:CDS |
| CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1_3:-4940882 | None:intergenic |
| CATACGTTCGTTGGCATCCT+CGG | 0.362541 | 1_3:-4937331 | None:intergenic |
| AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1_3:+4941237 | Msa0098930:CDS |
| TTGAAAGCTATTTATACATA+AGG | 0.368274 | 1_3:+4941959 | Msa0098930:three_prime_UTR |
| TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1_3:-4940728 | None:intergenic |
| CTAATTGTTGATGCTCCGCC+TGG | 0.377996 | 1_3:+4941087 | Msa0098930:CDS |
| CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1_3:-4940807 | None:intergenic |
| CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1_3:+4940883 | Msa0098930:CDS |
| CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1_3:-4940874 | None:intergenic |
| CTACAATGTCACAAACAAAC+TGG | 0.407779 | 1_3:-4941839 | None:intergenic |
| GTCTATGTTGAGTCTAATCT+CGG | 0.416769 | 1_3:+4940943 | Msa0098930:CDS |
| CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1_3:+4940741 | Msa0098930:CDS |
| AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1_3:+4941238 | Msa0098930:CDS |
| GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1_3:+4941464 | Msa0098930:CDS |
| CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1_3:+4940751 | Msa0098930:CDS |
| TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1_3:-4941472 | None:intergenic |
| AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1_3:+4941341 | Msa0098930:CDS |
| ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1_3:-4941287 | None:intergenic |
| AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1_3:-4940806 | None:intergenic |
| GCAGAATCAGACTGAGGACC+TGG | 0.452269 | 1_3:-4937460 | None:intergenic |
| CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1_3:-4940997 | None:intergenic |
| CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1_3:-4941292 | None:intergenic |
| ATACGTTCGTTGGCATCCTC+GGG | 0.457202 | 1_3:-4937330 | None:intergenic |
| CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1_3:-4941143 | None:intergenic |
| CTTCTGGACATTGATATTTG+TGG | 0.463857 | 1_3:+4940850 | Msa0098930:CDS |
| AGAGAAGAGAAGAGCTTCCA+TGG | 0.467899 | 1_3:+4937290 | Msa0098930:CDS |
| ATCTCGGGGTCATGTCAATT+GGG | 0.470649 | 1_3:+4940959 | Msa0098930:CDS |
| CTTTGCAAGGCAGCCGAAGA+AGG | 0.473054 | 1_3:+4941504 | Msa0098930:CDS |
| TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1_3:+4941329 | Msa0098930:CDS |
| GGTCCTCAGTCTGATTCTGC+TGG | 0.484126 | 1_3:+4937463 | Msa0098930:CDS |
| ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1_3:-4941105 | None:intergenic |
| GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1_3:+4940813 | Msa0098930:CDS |
| GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1_3:-4940918 | None:intergenic |
| ACAATCTTTATCTGCAAAGC+AGG | 0.488362 | 1_3:-4941532 | None:intergenic |
| AAAGCAGGATCTGCCTTCTT+CGG | 0.495633 | 1_3:-4941517 | None:intergenic |
| GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1_3:-4941281 | None:intergenic |
| TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1_3:-4941489 | None:intergenic |
| AAATATATTCATACGTTCGT+TGG | 0.505708 | 1_3:-4937340 | None:intergenic |
| GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1_3:+4940717 | Msa0098930:CDS |
| TATATCTCCGTTGTTCTCCA+TGG | 0.511044 | 1_3:-4937307 | None:intergenic |
| ATACTGGTCTTGTCAGGAAA+GGG | 0.511385 | 1_3:+4940757 | Msa0098930:CDS |
| CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1_3:-4941286 | None:intergenic |
| GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1_3:+4941417 | Msa0098930:CDS |
| AGTCATCGTCGTCACCCGCC+AGG | 0.519376 | 1_3:+4937012 | Msa0098930:CDS |
| AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1_3:-4941471 | None:intergenic |
| TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1_3:+4940812 | Msa0098930:CDS |
| CCAAGCATCCCAAAGATGCT+TGG | 0.531277 | 1_3:+4940874 | Msa0098930:CDS |
| TCTATGTTGAGTCTAATCTC+GGG | 0.532182 | 1_3:+4940944 | Msa0098930:CDS |
| GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1_3:+4941588 | Msa0098930:CDS |
| GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1_3:+4940910 | Msa0098930:CDS |
| CTGGCATTTACAGATTGCCC+AGG | 0.541633 | 1_3:+4937442 | Msa0098930:intron |
| GATACTGGTCTTGTCAGGAA+AGG | 0.542244 | 1_3:+4940756 | Msa0098930:CDS |
| AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1_3:-4940722 | None:intergenic |
| TTGTCAGGAAAGGGAGGTGT+TGG | 0.547516 | 1_3:+4940766 | Msa0098930:CDS |
| TCGGCTGCCTTGCAAAGCTG+TGG | 0.547932 | 1_3:-4941498 | None:intergenic |
| TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1_3:+4940914 | Msa0098930:CDS |
| AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1_3:+4941239 | Msa0098930:CDS |
| ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1_3:-4940991 | None:intergenic |
| AGATTAGACTCAACATAGAC+AGG | 0.558926 | 1_3:-4940940 | None:intergenic |
| AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1_3:-4941112 | None:intergenic |
| ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1_3:-4941291 | None:intergenic |
| AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1_3:+4941578 | Msa0098930:CDS |
| AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1_3:+4941602 | Msa0098930:CDS |
| ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1_3:-4941406 | None:intergenic |
| CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1_3:+4941612 | Msa0098930:CDS |
| GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1_3:+4941000 | Msa0098930:CDS |
| TATCAGAAACAAACACCTGC+CGG | 0.594674 | 1_3:+4936989 | Msa0098930:CDS |
| ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1_3:+4941589 | Msa0098930:CDS |
| TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1_3:+4941491 | Msa0098930:CDS |
| GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1_3:+4941443 | Msa0098930:CDS |
| CAGAATCAGACTGAGGACCT+GGG | 0.614924 | 1_3:-4937459 | None:intergenic |
| GCGGGTGACGACGATGACTC+CGG | 0.617264 | 1_3:-4937008 | None:intergenic |
| AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1_3:-4941181 | None:intergenic |
| GTGACGACGATGACTCCGGC+AGG | 0.628500 | 1_3:-4937004 | None:intergenic |
| AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1_3:+4941334 | Msa0098930:CDS |
| CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1_3:+4941144 | Msa0098930:CDS |
| CTGGTCTTGTCAGGAAAGGG+AGG | 0.640582 | 1_3:+4940760 | Msa0098930:CDS |
| GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1_3:+4941414 | Msa0098930:CDS |
| TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1_3:-4941186 | None:intergenic |
| CTATGTTGAGTCTAATCTCG+GGG | 0.653466 | 1_3:+4940945 | Msa0098930:CDS |
| AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1_3:+4941411 | Msa0098930:CDS |
| AGAGCTTCCATGGAGAACAA+CGG | 0.682274 | 1_3:+4937300 | Msa0098930:CDS |
| GGAAAATCTGATGCATGTGA+AGG | 0.682695 | 1_3:+4937484 | Msa0098930:CDS |
| GGGGTTGTAGAGAATATGAG+TGG | 0.686460 | 1_3:+4941258 | Msa0098930:CDS |
| TTTCCAGCAGAATCAGACTG+AGG | 0.699719 | 1_3:-4937466 | None:intergenic |
| CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1_3:-4940927 | None:intergenic |
| GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1_3:+4941446 | Msa0098930:CDS |
| GAACAACGGAGATATACCCG+AGG | 0.745436 | 1_3:+4937314 | Msa0098930:CDS |
| CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1_3:-4940740 | None:intergenic |
| TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1_3:-4941102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCAATTATTTTAACAAA+CGG | - | chr1_3:4937232-4937251 | None:intergenic | 10.0% |
| !!! | ATATTTTTCTTAACATAAAT+TGG | + | chr1_3:4940522-4940541 | Msa0098930:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939531-4939550 | Msa0098930:intron | 100.0% |
| !!! | AACCATTTTTATCTATTTAA+AGG | + | chr1_3:4939890-4939909 | Msa0098930:intron | 15.0% |
| !! | ATCCTTTAAATAGATAAAAA+TGG | - | chr1_3:4939895-4939914 | None:intergenic | 15.0% |
| !!! | TTTTTATCTATTTAAAGGAT+TGG | + | chr1_3:4939895-4939914 | Msa0098930:intron | 15.0% |
| !! | TTAGAAATATTTCGATAATT+TGG | + | chr1_3:4939963-4939982 | Msa0098930:intron | 15.0% |
| !!! | ATGTAAAATTAAGTTTTATG+CGG | + | chr1_3:4941724-4941743 | Msa0098930:three_prime_UTR | 15.0% |
| !! | AAAGTAAGAAATATAGAAGA+GGG | - | chr1_3:4937094-4937113 | None:intergenic | 20.0% |
| !! | CTATATTTCTTACTTTCAAT+TGG | + | chr1_3:4937098-4937117 | Msa0098930:intron | 20.0% |
| !! | GAACAAGCTTATATAAATAA+GGG | - | chr1_3:4937882-4937901 | None:intergenic | 20.0% |
| !! | TGAACAAGCTTATATAAATA+AGG | - | chr1_3:4937883-4937902 | None:intergenic | 20.0% |
| !! | ATCATTATCATTGCTTATTT+GGG | + | chr1_3:4938005-4938024 | Msa0098930:intron | 20.0% |
| !!! | AGTATTTTATTATAGCCAAA+TGG | - | chr1_3:4938740-4938759 | None:intergenic | 20.0% |
| !! | TATAGAAATAGATCAAACAA+TGG | - | chr1_3:4939154-4939173 | None:intergenic | 20.0% |
| !! | ATAGAATATTTAAAGAGCAA+AGG | - | chr1_3:4939298-4939317 | None:intergenic | 20.0% |
| !!! | GCTCTTTAAATATTCTATTT+TGG | + | chr1_3:4939300-4939319 | Msa0098930:intron | 20.0% |
| !!! | CTGAAATTTAATTTAGTTCA+TGG | - | chr1_3:4939448-4939467 | None:intergenic | 20.0% |
| !!! | AGTGAAATGTTTATTTTAGA+AGG | - | chr1_3:4940310-4940329 | None:intergenic | 20.0% |
| !! | ATCATTCTTCAAACTATTAT+TGG | - | chr1_3:4940400-4940419 | None:intergenic | 20.0% |
| !! | CCAAAGAGAATATTTATAAT+CGG | - | chr1_3:4940457-4940476 | None:intergenic | 20.0% |
| !!! | CATTTTCATTTTTTTTGCAT+TGG | + | chr1_3:4940681-4940700 | Msa0098930:intron | 20.0% |
| !!! | AGTTTTTAAAAGACGTTTAT+TGG | + | chr1_3:4941049-4941068 | Msa0098930:CDS | 20.0% |
| !!! | GTTTTTAAAAGACGTTTATT+GGG | + | chr1_3:4941050-4941069 | Msa0098930:CDS | 20.0% |
| !!! | TTTTTAAAAGACGTTTATTG+GGG | + | chr1_3:4941051-4941070 | Msa0098930:CDS | 20.0% |
| !! | TTTATGAAGATTACAGATAA+TGG | + | chr1_3:4941309-4941328 | Msa0098930:CDS | 20.0% |
| !!! | GCATAAAACTTAATTTTACA+TGG | - | chr1_3:4941725-4941744 | None:intergenic | 20.0% |
| !! | TTGAAAGCTATTTATACATA+AGG | + | chr1_3:4941959-4941978 | Msa0098930:three_prime_UTR | 20.0% |
| ! | GAAAGTAAGAAATATAGAAG+AGG | - | chr1_3:4937095-4937114 | None:intergenic | 25.0% |
| !! | ATGTGGTTTCTAATTTTGAA+TGG | + | chr1_3:4937132-4937151 | Msa0098930:intron | 25.0% |
| !!! | GATTCTAAAATCATACTCTT+TGG | + | chr1_3:4937172-4937191 | Msa0098930:intron | 25.0% |
| ! | AAATATATTCATACGTTCGT+TGG | - | chr1_3:4937343-4937362 | None:intergenic | 25.0% |
| !! | AACATAAAAGCATAAGAGAA+AGG | - | chr1_3:4937574-4937593 | None:intergenic | 25.0% |
| ! | CACTTAATCATTTATCATGT+AGG | + | chr1_3:4937631-4937650 | Msa0098930:intron | 25.0% |
| ! | AATCCTAGAACTTAAAAGAA+TGG | - | chr1_3:4937910-4937929 | None:intergenic | 25.0% |
| !!! | TTCTTTTAAGTTCTAGGATT+TGG | + | chr1_3:4937910-4937929 | Msa0098930:intron | 25.0% |
| !!! | TCTTTTAAGTTCTAGGATTT+GGG | + | chr1_3:4937911-4937930 | Msa0098930:intron | 25.0% |
| ! | CATCATTATCATTGCTTATT+TGG | + | chr1_3:4938004-4938023 | Msa0098930:intron | 25.0% |
| !! | ATAAAATGTTTCACTAGTCT+TGG | - | chr1_3:4938103-4938122 | None:intergenic | 25.0% |
| !!! | TGCTTAGTTTGTTTATTGTT+TGG | + | chr1_3:4938135-4938154 | Msa0098930:intron | 25.0% |
| !!! | TTATTGTTTGGTCTTGTTAT+AGG | + | chr1_3:4938147-4938166 | Msa0098930:intron | 25.0% |
| !!! | TATTGTTTGGTCTTGTTATA+GGG | + | chr1_3:4938148-4938167 | Msa0098930:intron | 25.0% |
| ! | ATTTGTTCAATTTGTGAAGT+TGG | + | chr1_3:4938219-4938238 | Msa0098930:intron | 25.0% |
| ! | CTAGTCATGAATTATTAAGT+TGG | - | chr1_3:4938294-4938313 | None:intergenic | 25.0% |
| ! | GAAACAAAGTGACATTATAT+AGG | + | chr1_3:4938397-4938416 | Msa0098930:intron | 25.0% |
| ! | GTATATTGTAATAAAGAGTG+TGG | + | chr1_3:4938890-4938909 | Msa0098930:intron | 25.0% |
| ! | AGGATATTAAATAAAGAGTG+TGG | + | chr1_3:4938915-4938934 | Msa0098930:intron | 25.0% |
| !! | TATTAAATAAAGAGTGTGGT+AGG | + | chr1_3:4938919-4938938 | Msa0098930:intron | 25.0% |
| ! | AGAGTGTATTTATTTGATGA+AGG | - | chr1_3:4939126-4939145 | None:intergenic | 25.0% |
| ! | AATCAAAGATGCAATATGAT+AGG | - | chr1_3:4939205-4939224 | None:intergenic | 25.0% |
| ! | GAACATTGAAGAAGAAATTT+AGG | + | chr1_3:4939733-4939752 | Msa0098930:intron | 25.0% |
| ! | ATTGGTGAATGACAATAAAA+AGG | + | chr1_3:4939913-4939932 | Msa0098930:intron | 25.0% |
| ! | AAAATTGAATCCTTCTTGAT+TGG | - | chr1_3:4940011-4940030 | None:intergenic | 25.0% |
| !! | ATATTTATAATCGGTTTCAG+AGG | - | chr1_3:4940448-4940467 | None:intergenic | 25.0% |
| ! | CCGATTATAAATATTCTCTT+TGG | + | chr1_3:4940454-4940473 | Msa0098930:intron | 25.0% |
| ! | AAATATGACATCAAGAAAGT+AGG | - | chr1_3:4940556-4940575 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTGTATGACACT+TGG | + | chr1_3:4940571-4940590 | Msa0098930:intron | 25.0% |
| !!! | ATTTTTTCTGTATGACACTT+GGG | + | chr1_3:4940572-4940591 | Msa0098930:intron | 25.0% |
| !!! | TAGGGCATTTCTTAATTTTA+TGG | + | chr1_3:4940606-4940625 | Msa0098930:intron | 25.0% |
| !! | ATAAACTTGAGATTTGAGAT+GGG | - | chr1_3:4941294-4941313 | None:intergenic | 25.0% |
| ! | AAAGATAATAGATAAGCTGA+TGG | + | chr1_3:4941578-4941597 | Msa0098930:CDS | 25.0% |
| !! | AAACGAATTTTCTGTCAATT+AGG | - | chr1_3:4941690-4941709 | None:intergenic | 25.0% |
| ! | ATAATTCTTTCAAACACTTC+TGG | - | chr1_3:4941931-4941950 | None:intergenic | 25.0% |
| ! | CGTAAAATGAGAACTTTTGA+TGG | - | chr1_3:4936969-4936988 | None:intergenic | 30.0% |
| AATTGGTGTGTTTGATTATG+TGG | + | chr1_3:4937115-4937134 | Msa0098930:intron | 30.0% | |
| TACACAAGAATCAAAGTCAA+TGG | - | chr1_3:4937409-4937428 | None:intergenic | 30.0% | |
| ! | TGTGTATTTTGTATTGTTGC+TGG | + | chr1_3:4937423-4937442 | Msa0098930:intron | 30.0% |
| !! | TTGCACAAATTTGCTGATTT+GGG | - | chr1_3:4937513-4937532 | None:intergenic | 30.0% |
| GTTTATTTCCAATGACCATT+AGG | + | chr1_3:4937591-4937610 | Msa0098930:intron | 30.0% | |
| TAAGTGCGTTTAATCAAACA+GGG | - | chr1_3:4937617-4937636 | None:intergenic | 30.0% | |
| TTAAGTGCGTTTAATCAAAC+AGG | - | chr1_3:4937618-4937637 | None:intergenic | 30.0% | |
| !! | CTTGTTTTCATAAACTCTAC+GGG | - | chr1_3:4937747-4937766 | None:intergenic | 30.0% |
| !!! | CCTTGTTTTCATAAACTCTA+CGG | - | chr1_3:4937748-4937767 | None:intergenic | 30.0% |
| TGAAACAGTGTATGGATAAT+TGG | + | chr1_3:4937768-4937787 | Msa0098930:intron | 30.0% | |
| ! | AAATAAGGGTTTGTTTCGAT+TGG | - | chr1_3:4937868-4937887 | None:intergenic | 30.0% |
| !!! | ACACCATTCTTTTAAGTTCT+AGG | + | chr1_3:4937904-4937923 | Msa0098930:intron | 30.0% |
| ATTGTAGTGTGATTTCTTTC+CGG | + | chr1_3:4937978-4937997 | Msa0098930:intron | 30.0% | |
| AATCAGCTCTATCATAGTTA+TGG | + | chr1_3:4938052-4938071 | Msa0098930:intron | 30.0% | |
| TTATAGGGTTGTTAATTCCT+TGG | + | chr1_3:4938163-4938182 | Msa0098930:intron | 30.0% | |
| TATAGGGTTGTTAATTCCTT+GGG | + | chr1_3:4938164-4938183 | Msa0098930:intron | 30.0% | |
| GTTCATTTCATAGTTGTCAA+AGG | - | chr1_3:4938249-4938268 | None:intergenic | 30.0% | |
| ! | TATGACACGTTTGCTAAAAT+CGG | - | chr1_3:4938523-4938542 | None:intergenic | 30.0% |
| TGATAAAGACTTAAGCCATT+TGG | + | chr1_3:4938722-4938741 | Msa0098930:intron | 30.0% | |
| ! | TTGTAATAAAGAGTGTGGTT+AGG | + | chr1_3:4938895-4938914 | Msa0098930:intron | 30.0% |
| TTATGCCTCAGTTGTATAAA+TGG | + | chr1_3:4938962-4938981 | Msa0098930:intron | 30.0% | |
| ! | CGATTTCTGCTTCTAAATTT+TGG | + | chr1_3:4939176-4939195 | Msa0098930:intron | 30.0% |
| ! | AAAGTATTAGATGTAGGTTG+TGG | - | chr1_3:4939271-4939290 | None:intergenic | 30.0% |
| GAATATTTAAAGAGCAAAGG+TGG | - | chr1_3:4939295-4939314 | None:intergenic | 30.0% | |
| AATTATTCATTGCACAATCC+AGG | + | chr1_3:4939366-4939385 | Msa0098930:intron | 30.0% | |
| ATTATTCATTGCACAATCCA+GGG | + | chr1_3:4939367-4939386 | Msa0098930:intron | 30.0% | |
| ACAGGCTTATATTTCTCTAA+CGG | - | chr1_3:4939487-4939506 | None:intergenic | 30.0% | |
| ! | TTTGTAATGGAGTAGTGTTA+GGG | + | chr1_3:4939619-4939638 | Msa0098930:intron | 30.0% |
| TGAAGAAGAAATTTAGGAAG+TGG | + | chr1_3:4939739-4939758 | Msa0098930:intron | 30.0% | |
| ! | TTTGATCCCTTTGAAAATGT+CGG | + | chr1_3:4939787-4939806 | Msa0098930:intron | 30.0% |
| GAGAAATGCTAGTTGTAATT+TGG | + | chr1_3:4939939-4939958 | Msa0098930:intron | 30.0% | |
| GTCATATGATATGTTGCATT+GGG | + | chr1_3:4940058-4940077 | Msa0098930:intron | 30.0% | |
| TCATATGATATGTTGCATTG+GGG | + | chr1_3:4940059-4940078 | Msa0098930:intron | 30.0% | |
| GGTTATTCAATTAGATCTGT+GGG | + | chr1_3:4940080-4940099 | Msa0098930:intron | 30.0% | |
| ! | AATTGTATCAGTTTTTCCTG+TGG | + | chr1_3:4940129-4940148 | Msa0098930:intron | 30.0% |
| !! | TGGGAGATTTTAGTCAATTT+TGG | + | chr1_3:4940161-4940180 | Msa0098930:intron | 30.0% |
| !!! | TTTTGGTTTTTATTGCTTCC+TGG | + | chr1_3:4940178-4940197 | Msa0098930:intron | 30.0% |
| GCTTAACTAACTGAAAAACA+CGG | - | chr1_3:4940206-4940225 | None:intergenic | 30.0% | |
| ACAAACAATGCTTCTAAACA+AGG | - | chr1_3:4940228-4940247 | None:intergenic | 30.0% | |
| TGCCATTGTTTCAAAGTTAA+TGG | + | chr1_3:4940489-4940508 | Msa0098930:intron | 30.0% | |
| !! | CACCATTAACTTTGAAACAA+TGG | - | chr1_3:4940494-4940513 | None:intergenic | 30.0% |
| ACCAAAATGCTTAAACATGA+AGG | - | chr1_3:4940659-4940678 | None:intergenic | 30.0% | |
| AATTGAAATGTGTTCATCTG+AGG | - | chr1_3:4941115-4941134 | None:intergenic | 30.0% | |
| ! | GTGAATTTTTGCAAGAAAGT+TGG | + | chr1_3:4941222-4941241 | Msa0098930:CDS | 30.0% |
| CATAAACTTGAGATTTGAGA+TGG | - | chr1_3:4941295-4941314 | None:intergenic | 30.0% | |
| ! | AGTGAAGTATTTGATAGTAG+CGG | + | chr1_3:4941411-4941430 | Msa0098930:CDS | 30.0% |
| ! | TCTATTATCTTTTGTAACGC+TGG | - | chr1_3:4941570-4941589 | None:intergenic | 30.0% |
| !! | AATTAAGTTTTATGCGGTTG+AGG | + | chr1_3:4941730-4941749 | Msa0098930:three_prime_UTR | 30.0% |
| !! | GTTGCACAAATTTGCTGATT+TGG | - | chr1_3:4937514-4937533 | None:intergenic | 35.0% |
| TTTAATCAAACAGGGCCTAA+TGG | - | chr1_3:4937609-4937628 | None:intergenic | 35.0% | |
| CCGTAGAGTTTATGAAAACA+AGG | + | chr1_3:4937745-4937764 | Msa0098930:intron | 35.0% | |
| AAACAAGGTGAAACAGTGTA+TGG | + | chr1_3:4937760-4937779 | Msa0098930:intron | 35.0% | |
| TTGTAGTGTGATTTCTTTCC+GGG | + | chr1_3:4937979-4937998 | Msa0098930:intron | 35.0% | |
| !! | TGGGTTGATTAGCAAAGAAA+TGG | + | chr1_3:4938024-4938043 | Msa0098930:intron | 35.0% |
| CTATGAAATGAACCATGTGT+TGG | + | chr1_3:4938256-4938275 | Msa0098930:intron | 35.0% | |
| ATTGAATGATGTCCAACACA+TGG | - | chr1_3:4938271-4938290 | None:intergenic | 35.0% | |
| ! | TTGTTTCCCTTTTGCGTATT+AGG | - | chr1_3:4938384-4938403 | None:intergenic | 35.0% |
| GAGACAACACACAAAAAGAT+AGG | + | chr1_3:4938448-4938467 | Msa0098930:intron | 35.0% | |
| AGGAAATAGAATTCCTCGTT+AGG | + | chr1_3:4938468-4938487 | Msa0098930:intron | 35.0% | |
| AAATAGAATTCCTCGTTAGG+TGG | + | chr1_3:4938471-4938490 | Msa0098930:intron | 35.0% | |
| TCGGTATCTTCAAAAAACAC+AGG | - | chr1_3:4938504-4938523 | None:intergenic | 35.0% | |
| ! | CTTTGAAAAACACCTACTAG+AGG | + | chr1_3:4938603-4938622 | Msa0098930:intron | 35.0% |
| !! | GCATGGAAGCATTCTATTAT+GGG | - | chr1_3:4938631-4938650 | None:intergenic | 35.0% |
| !! | AGCATGGAAGCATTCTATTA+TGG | - | chr1_3:4938632-4938651 | None:intergenic | 35.0% |
| GTCTTTATCAATGAAGCTCT+TGG | - | chr1_3:4938712-4938731 | None:intergenic | 35.0% | |
| GGAAGTGAACAAACAAACTA+TGG | - | chr1_3:4938767-4938786 | None:intergenic | 35.0% | |
| ACTCACCATTTATACAACTG+AGG | - | chr1_3:4938970-4938989 | None:intergenic | 35.0% | |
| AGTTGTATAAATGGTGAGTG+AGG | + | chr1_3:4938971-4938990 | Msa0098930:intron | 35.0% | |
| AGAAGGAGAAAAATCTCTCT+CGG | - | chr1_3:4939051-4939070 | None:intergenic | 35.0% | |
| TGATGAAGGAAAACTGTAGA+AGG | - | chr1_3:4939112-4939131 | None:intergenic | 35.0% | |
| !! | GGTGGAAAAGTATTAGATGT+AGG | - | chr1_3:4939277-4939296 | None:intergenic | 35.0% |
| !!! | ATTTTGGCTCTAATGAACCT+AGG | + | chr1_3:4939316-4939335 | Msa0098930:intron | 35.0% |
| ! | GATAAGGAGGTTGTTTCAAT+GGG | + | chr1_3:4939578-4939597 | Msa0098930:intron | 35.0% |
| ! | GTTTGTAATGGAGTAGTGTT+AGG | + | chr1_3:4939618-4939637 | Msa0098930:intron | 35.0% |
| ! | TTGTAATGGAGTAGTGTTAG+GGG | + | chr1_3:4939620-4939639 | Msa0098930:intron | 35.0% |
| AAGAAATTTAGGAAGTGGAG+TGG | + | chr1_3:4939744-4939763 | Msa0098930:intron | 35.0% | |
| AGAAATTTAGGAAGTGGAGT+GGG | + | chr1_3:4939745-4939764 | Msa0098930:intron | 35.0% | |
| ! | GACATTTTCAAAGGGATCAA+AGG | - | chr1_3:4939788-4939807 | None:intergenic | 35.0% |
| TGTGCTTCAATATTGTGTGT+TGG | + | chr1_3:4939836-4939855 | Msa0098930:intron | 35.0% | |
| GCAATGATTTCCAATCAAGA+AGG | + | chr1_3:4939998-4940017 | Msa0098930:intron | 35.0% | |
| !! | GTTTACCTGCATTATTTTGC+AGG | + | chr1_3:4940036-4940055 | Msa0098930:intron | 35.0% |
| TATGACCTGCAAAATAATGC+AGG | - | chr1_3:4940044-4940063 | None:intergenic | 35.0% | |
| GGTCATATGATATGTTGCAT+TGG | + | chr1_3:4940057-4940076 | Msa0098930:intron | 35.0% | |
| GGGTTATTCAATTAGATCTG+TGG | + | chr1_3:4940079-4940098 | Msa0098930:intron | 35.0% | |
| ! | TTTTCCTGTGGTATTTTGTG+TGG | + | chr1_3:4940141-4940160 | Msa0098930:intron | 35.0% |
| ! | TTTCCTGTGGTATTTTGTGT+GGG | + | chr1_3:4940142-4940161 | Msa0098930:intron | 35.0% |
| ! | GTTTTCTATCATGCTTTCAC+TGG | + | chr1_3:4940330-4940349 | Msa0098930:intron | 35.0% |
| ! | GCCTTCATGTTTAAGCATTT+TGG | + | chr1_3:4940655-4940674 | Msa0098930:intron | 35.0% |
| !!! | TGCATTGGTTTTTGCAGATA+TGG | + | chr1_3:4940696-4940715 | Msa0098930:intron | 35.0% |
| CAGTATCTTATGTTTCACAG+TGG | - | chr1_3:4940743-4940762 | None:intergenic | 35.0% | |
| CACTGTGAAACATAAGATAC+TGG | + | chr1_3:4940741-4940760 | Msa0098930:CDS | 35.0% | |
| CTTCTGGACATTGATATTTG+TGG | + | chr1_3:4940850-4940869 | Msa0098930:CDS | 35.0% | |
| AGATTAGACTCAACATAGAC+AGG | - | chr1_3:4940943-4940962 | None:intergenic | 35.0% | |
| GTCTATGTTGAGTCTAATCT+CGG | + | chr1_3:4940943-4940962 | Msa0098930:CDS | 35.0% | |
| TCTATGTTGAGTCTAATCTC+GGG | + | chr1_3:4940944-4940963 | Msa0098930:CDS | 35.0% | |
| !! | TCAATAAGAGAGACTTGTTG+AGG | - | chr1_3:4941189-4941208 | None:intergenic | 35.0% |
| AAAGTTGGAGTGAAAGTTCT+TGG | + | chr1_3:4941237-4941256 | Msa0098930:CDS | 35.0% | |
| AAGTTGGAGTGAAAGTTCTT+GGG | + | chr1_3:4941238-4941257 | Msa0098930:CDS | 35.0% | |
| TGGTGAGATGAAAGATGTTA+CGG | + | chr1_3:4941329-4941348 | Msa0098930:CDS | 35.0% | |
| GCGATTAAATTCAGCATTTC+AGG | - | chr1_3:4941387-4941406 | None:intergenic | 35.0% | |
| ACTATCAAATACTTCACTGC+AGG | - | chr1_3:4941409-4941428 | None:intergenic | 35.0% | |
| AAAGGAACCTTACCAAGAAA+GGG | - | chr1_3:4941474-4941493 | None:intergenic | 35.0% | |
| TAAAGGAACCTTACCAAGAA+AGG | - | chr1_3:4941475-4941494 | None:intergenic | 35.0% | |
| ACAATCTTTATCTGCAAAGC+AGG | - | chr1_3:4941535-4941554 | None:intergenic | 35.0% | |
| ATAAGCTGATGGAAACTAGT+GGG | + | chr1_3:4941589-4941608 | Msa0098930:CDS | 35.0% | |
| CTACAATGTCACAAACAAAC+TGG | - | chr1_3:4941842-4941861 | None:intergenic | 35.0% | |
| TATCAGAAACAAACACCTGC+CGG | + | chr1_3:4936989-4937008 | Msa0098930:CDS | 40.0% | |
| TATATCTCCGTTGTTCTCCA+TGG | - | chr1_3:4937310-4937329 | None:intergenic | 40.0% | |
| GGAAAATCTGATGCATGTGA+AGG | + | chr1_3:4937484-4937503 | Msa0098930:CDS | 40.0% | |
| ATTTGTGCAACTGCTCCTAA+AGG | + | chr1_3:4937523-4937542 | Msa0098930:intron | 40.0% | |
| ! | TACGGGATAACTTGCGAAAA+CGG | - | chr1_3:4937730-4937749 | None:intergenic | 40.0% |
| ! | GTGACTTGTGAGACTGATTA+TGG | - | chr1_3:4937812-4937831 | None:intergenic | 40.0% |
| TATCTAGTACATGAGCACGA+AGG | - | chr1_3:4937959-4937978 | None:intergenic | 40.0% | |
| ! | AGCAATGATAATGATGAGCC+CGG | - | chr1_3:4938000-4938019 | None:intergenic | 40.0% |
| ATTCCTTGGGCATTTGATAG+TGG | + | chr1_3:4938177-4938196 | Msa0098930:intron | 40.0% | |
| ! | TTCCTTGGGCATTTGATAGT+GGG | + | chr1_3:4938178-4938197 | Msa0098930:intron | 40.0% |
| ! | GTGGGTATAATTTTGTGCAG+AGG | + | chr1_3:4938196-4938215 | Msa0098930:intron | 40.0% |
| CATTAGGCAAGTGTGGAAAT+CGG | - | chr1_3:4938348-4938367 | None:intergenic | 40.0% | |
| TTGCCTAATGGTGAAGTTAG+CGG | + | chr1_3:4938358-4938377 | Msa0098930:intron | 40.0% | |
| CATGAACAACACACTAGCTA+TGG | - | chr1_3:4938568-4938587 | None:intergenic | 40.0% | |
| ! | TAGCTAGTGTGTTGTTCATG+TGG | + | chr1_3:4938568-4938587 | Msa0098930:intron | 40.0% |
| ! | AGCTAGTGTGTTGTTCATGT+GGG | + | chr1_3:4938569-4938588 | Msa0098930:intron | 40.0% |
| AATAGAATGCTTCCATGCTC+AGG | + | chr1_3:4938633-4938652 | Msa0098930:intron | 40.0% | |
| TTCCATGCTCAGGAAAAAGA+TGG | + | chr1_3:4938643-4938662 | Msa0098930:intron | 40.0% | |
| ! | AACCATCTTTTTCCTGAGCA+TGG | - | chr1_3:4938648-4938667 | None:intergenic | 40.0% |
| AATGAAGCTCTTGGATACAG+AGG | - | chr1_3:4938703-4938722 | None:intergenic | 40.0% | |
| CGAGGGCTGATAAGTAAAAA+GGG | + | chr1_3:4938867-4938886 | Msa0098930:intron | 40.0% | |
| GAGGGCTGATAAGTAAAAAG+GGG | + | chr1_3:4938868-4938887 | Msa0098930:intron | 40.0% | |
| TGAGGCTAGTGAAGATTGAT+GGG | + | chr1_3:4938989-4939008 | Msa0098930:intron | 40.0% | |
| TAAGATGCTGAATCACACCT+AGG | - | chr1_3:4939336-4939355 | None:intergenic | 40.0% | |
| ATTGCACAATCCAGGGAATT+GGG | + | chr1_3:4939374-4939393 | Msa0098930:intron | 40.0% | |
| ATATAAGCCTGTCGCTGAAA+TGG | + | chr1_3:4939495-4939514 | Msa0098930:intron | 40.0% | |
| ! | GGATAAGGAGGTTGTTTCAA+TGG | + | chr1_3:4939577-4939596 | Msa0098930:intron | 40.0% |
| ! | GAGGTTGTTTCAATGGGAAA+AGG | + | chr1_3:4939584-4939603 | Msa0098930:intron | 40.0% |
| GTTTCAATGGGAAAAGGAGT+TGG | + | chr1_3:4939590-4939609 | Msa0098930:intron | 40.0% | |
| AGAGTTAGATAGGTGGAAGT+GGG | + | chr1_3:4939659-4939678 | Msa0098930:intron | 40.0% | |
| ! | ATCCCTTTGAAAATGTCGGT+TGG | + | chr1_3:4939791-4939810 | Msa0098930:intron | 40.0% |
| ! | CTCCAACCGACATTTTCAAA+GGG | - | chr1_3:4939796-4939815 | None:intergenic | 40.0% |
| GCTTCAATATTGTGTGTTGG+AGG | + | chr1_3:4939839-4939858 | Msa0098930:intron | 40.0% | |
| !! | ATTAGATCTGTGGGTTAGCT+AGG | + | chr1_3:4940089-4940108 | Msa0098930:intron | 40.0% |
| !! | TATGACACTTGGGCTGTTTT+TGG | + | chr1_3:4940582-4940601 | Msa0098930:intron | 40.0% |
| !!! | ACTTGGGCTGTTTTTGGATA+GGG | + | chr1_3:4940588-4940607 | Msa0098930:intron | 40.0% |
| TTTCACAGTGGCCATTCTTT+CGG | - | chr1_3:4940731-4940750 | None:intergenic | 40.0% | |
| !! | CATAAGATACTGGTCTTGTC+AGG | + | chr1_3:4940751-4940770 | Msa0098930:CDS | 40.0% |
| !! | ATACTGGTCTTGTCAGGAAA+GGG | + | chr1_3:4940757-4940776 | Msa0098930:CDS | 40.0% |
| !!! | GGATTTTCAAGTTGGTCTTC+TGG | + | chr1_3:4940834-4940853 | Msa0098930:CDS | 40.0% |
| CTATGTTGAGTCTAATCTCG+GGG | + | chr1_3:4940945-4940964 | Msa0098930:CDS | 40.0% | |
| ATCCAGACGAAGCTGTTATA+TGG | + | chr1_3:4940995-4941014 | Msa0098930:CDS | 40.0% | |
| !! | TTGATAAGCCCATTTTTGCG+TGG | - | chr1_3:4941027-4941046 | None:intergenic | 40.0% |
| CTAGATGCTGCTAATGTAGA+CGG | + | chr1_3:4941144-4941163 | Msa0098930:CDS | 40.0% | |
| AGTTGGAGTGAAAGTTCTTG+GGG | + | chr1_3:4941239-4941258 | Msa0098930:CDS | 40.0% | |
| AGATGAAAGATGTTACGGAG+TGG | + | chr1_3:4941334-4941353 | Msa0098930:CDS | 40.0% | |
| AGATGTTACGGAGTGGATAT+CGG | + | chr1_3:4941341-4941360 | Msa0098930:CDS | 40.0% | |
| ! | GAAGTATTTGATAGTAGCGG+TGG | + | chr1_3:4941414-4941433 | Msa0098930:CDS | 40.0% |
| TTGCAAAGCTGTGGATCTAA+AGG | - | chr1_3:4941492-4941511 | None:intergenic | 40.0% | |
| TTTAGATCCACAGCTTTGCA+AGG | + | chr1_3:4941491-4941510 | Msa0098930:CDS | 40.0% | |
| GATAAGCTGATGGAAACTAG+TGG | + | chr1_3:4941588-4941607 | Msa0098930:CDS | 40.0% | |
| GAAGGGAAAAGGGAAAAACC+TGG | - | chr1_3:4937033-4937052 | None:intergenic | 45.0% | |
| AGAGAAGAGAAGAGCTTCCA+TGG | + | chr1_3:4937290-4937309 | Msa0098930:CDS | 45.0% | |
| AGAGCTTCCATGGAGAACAA+CGG | + | chr1_3:4937300-4937319 | Msa0098930:CDS | 45.0% | |
| TTTCCAGCAGAATCAGACTG+AGG | - | chr1_3:4937469-4937488 | None:intergenic | 45.0% | |
| !! | AAGGTGAAGAGTACCAACCA+GGG | - | chr1_3:4937555-4937574 | None:intergenic | 45.0% |
| !! | AAAGGTGAAGAGTACCAACC+AGG | - | chr1_3:4937556-4937575 | None:intergenic | 45.0% |
| AAACAGGGCCTAATGGTCAT+TGG | - | chr1_3:4937602-4937621 | None:intergenic | 45.0% | |
| TACCCACTATCAAATGCCCA+AGG | - | chr1_3:4938183-4938202 | None:intergenic | 45.0% | |
| CGATTTCCACACTTGCCTAA+TGG | + | chr1_3:4938346-4938365 | Msa0098930:intron | 45.0% | |
| ACTTCACCATTAGGCAAGTG+TGG | - | chr1_3:4938355-4938374 | None:intergenic | 45.0% | |
| TTAGCGGCCTAATACGCAAA+AGG | + | chr1_3:4938374-4938393 | Msa0098930:intron | 45.0% | |
| TAGCGGCCTAATACGCAAAA+GGG | + | chr1_3:4938375-4938394 | Msa0098930:intron | 45.0% | |
| ! | TAGTGTGTTGTTCATGTGGG+AGG | + | chr1_3:4938572-4938591 | Msa0098930:intron | 45.0% |
| ! | AGTGTGTTGTTCATGTGGGA+GGG | + | chr1_3:4938573-4938592 | Msa0098930:intron | 45.0% |
| CTATTATGGGAGCCTCTAGT+AGG | - | chr1_3:4938618-4938637 | None:intergenic | 45.0% | |
| CAACAAAAGCTCTTCGATGC+AGG | - | chr1_3:4938678-4938697 | None:intergenic | 45.0% | |
| ACTTCCCTGTGTTCCTCATT+GGG | + | chr1_3:4938781-4938800 | Msa0098930:intron | 45.0% | |
| GCTCTCGAAACAGAGTTTGA+TGG | + | chr1_3:4938835-4938854 | Msa0098930:intron | 45.0% | |
| TTTGATGGAGATCAGAGCGA+GGG | + | chr1_3:4938850-4938869 | Msa0098930:intron | 45.0% | |
| GCGAGGGCTGATAAGTAAAA+AGG | + | chr1_3:4938866-4938885 | Msa0098930:intron | 45.0% | |
| GTGAGGCTAGTGAAGATTGA+TGG | + | chr1_3:4938988-4939007 | Msa0098930:intron | 45.0% | |
| GAGGCTAGTGAAGATTGATG+GGG | + | chr1_3:4938990-4939009 | Msa0098930:intron | 45.0% | |
| TGATGGGGACTGAGGAATAT+TGG | + | chr1_3:4939005-4939024 | Msa0098930:intron | 45.0% | |
| TGGAGTGAACCATCACAGTT+AGG | + | chr1_3:4939025-4939044 | Msa0098930:intron | 45.0% | |
| ! | GAGATTTTTCTCCTTCTCCG+AGG | + | chr1_3:4939054-4939073 | Msa0098930:intron | 45.0% |
| CATTGCACAATCCAGGGAAT+TGG | + | chr1_3:4939373-4939392 | Msa0098930:intron | 45.0% | |
| ACTACAACCATTTCAGCGAC+AGG | - | chr1_3:4939505-4939524 | None:intergenic | 45.0% | |
| TGTCGCTGAAATGGTTGTAG+TGG | + | chr1_3:4939504-4939523 | Msa0098930:intron | 45.0% | |
| GTCGCTGAAATGGTTGTAGT+GGG | + | chr1_3:4939505-4939524 | Msa0098930:intron | 45.0% | |
| TCGCTGAAATGGTTGTAGTG+GGG | + | chr1_3:4939506-4939525 | Msa0098930:intron | 45.0% | |
| TCAATGGGAAAAGGAGTTGG+TGG | + | chr1_3:4939593-4939612 | Msa0098930:intron | 45.0% | |
| !! | GAGTTGGTGGTGGTTTGTAA+TGG | + | chr1_3:4939606-4939625 | Msa0098930:intron | 45.0% |
| !! | AGTGTTAGGGGTTGATTCGA+TGG | + | chr1_3:4939632-4939651 | Msa0098930:intron | 45.0% |
| CGATGGAGAGAGAGTTAGAT+AGG | + | chr1_3:4939649-4939668 | Msa0098930:intron | 45.0% | |
| TGGAGAGAGAGTTAGATAGG+TGG | + | chr1_3:4939652-4939671 | Msa0098930:intron | 45.0% | |
| GAGAGTTAGATAGGTGGAAG+TGG | + | chr1_3:4939658-4939677 | Msa0098930:intron | 45.0% | |
| TTAGATAGGTGGAAGTGGGA+AGG | + | chr1_3:4939663-4939682 | Msa0098930:intron | 45.0% | |
| ! | CCTCCAACCGACATTTTCAA+AGG | - | chr1_3:4939797-4939816 | None:intergenic | 45.0% |
| ! | CCTTTGAAAATGTCGGTTGG+AGG | + | chr1_3:4939794-4939813 | Msa0098930:intron | 45.0% |
| ATATTGTGTGTTGGAGGCTG+TGG | + | chr1_3:4939845-4939864 | Msa0098930:intron | 45.0% | |
| TGTGGTAAACTCGAAGAAGG+AGG | + | chr1_3:4939863-4939882 | Msa0098930:intron | 45.0% | |
| ! | GGTTAGCTAGGAAGTTGTGT+TGG | + | chr1_3:4940101-4940120 | Msa0098930:intron | 45.0% |
| TCTCCCACACAAAATACCAC+AGG | - | chr1_3:4940148-4940167 | None:intergenic | 45.0% | |
| ATGCTTTCACTGGACATTGC+AGG | + | chr1_3:4940340-4940359 | Msa0098930:intron | 45.0% | |
| !!! | CACTTGGGCTGTTTTTGGAT+AGG | + | chr1_3:4940587-4940606 | Msa0098930:intron | 45.0% |
| !! | GATACTGGTCTTGTCAGGAA+AGG | + | chr1_3:4940756-4940775 | Msa0098930:CDS | 45.0% |
| !!! | GCTGCAAGGGATTTTCAAGT+TGG | + | chr1_3:4940826-4940845 | Msa0098930:CDS | 45.0% |
| CTTCTAGGCCAAGCATCTTT+GGG | - | chr1_3:4940885-4940904 | None:intergenic | 45.0% | |
| GGTGTATCTCTTGACCTTCT+AGG | - | chr1_3:4940900-4940919 | None:intergenic | 45.0% | |
| AATCTCGGGGTCATGTCAAT+TGG | + | chr1_3:4940958-4940977 | Msa0098930:CDS | 45.0% | |
| ATCTCGGGGTCATGTCAATT+GGG | + | chr1_3:4940959-4940978 | Msa0098930:CDS | 45.0% | |
| ATAACAGCTTCGTCTGGATG+AGG | - | chr1_3:4940994-4941013 | None:intergenic | 45.0% | |
| CTCCATATAACAGCTTCGTC+TGG | - | chr1_3:4941000-4941019 | None:intergenic | 45.0% | |
| GACGAAGCTGTTATATGGAG+AGG | + | chr1_3:4941000-4941019 | Msa0098930:CDS | 45.0% | |
| ! | ATGTGTTCATCTGAGGTTCC+AGG | - | chr1_3:4941108-4941127 | None:intergenic | 45.0% |
| CGTCTACATTAGCAGCATCT+AGG | - | chr1_3:4941146-4941165 | None:intergenic | 45.0% | |
| !! | AAGAGAGACTTGTTGAGGAG+TGG | - | chr1_3:4941184-4941203 | None:intergenic | 45.0% |
| GGGGTTGTAGAGAATATGAG+TGG | + | chr1_3:4941258-4941277 | Msa0098930:CDS | 45.0% | |
| ! | CTTGAGATTTGAGATGGGCT+GGG | - | chr1_3:4941289-4941308 | None:intergenic | 45.0% |
| ! | ACTTGAGATTTGAGATGGGC+TGG | - | chr1_3:4941290-4941309 | None:intergenic | 45.0% |
| ! | GTATTTGATAGTAGCGGTGG+TGG | + | chr1_3:4941417-4941436 | Msa0098930:CDS | 45.0% |
| AAAGCAGGATCTGCCTTCTT+CGG | - | chr1_3:4941520-4941539 | None:intergenic | 45.0% | |
| !! | AACTAGTGGGCTGTCAATGA+CGG | + | chr1_3:4941602-4941621 | Msa0098930:CDS | 45.0% |
| ! | CTGTCAATGACGGAAAGCAA+TGG | + | chr1_3:4941612-4941631 | Msa0098930:CDS | 45.0% |
| !! | AAAGAAAAAAATAATAAAAA+AGG | - | chr1_3:4937258-4937277 | None:intergenic | 5.0% |
| GGAAAAGGGAAAAACCTGGC+GGG | - | chr1_3:4937029-4937048 | None:intergenic | 50.0% | |
| GGGAAAAGGGAAAAACCTGG+CGG | - | chr1_3:4937030-4937049 | None:intergenic | 50.0% | |
| GAACAACGGAGATATACCCG+AGG | + | chr1_3:4937314-4937333 | Msa0098930:CDS | 50.0% | |
| ATACGTTCGTTGGCATCCTC+GGG | - | chr1_3:4937333-4937352 | None:intergenic | 50.0% | |
| CATACGTTCGTTGGCATCCT+CGG | - | chr1_3:4937334-4937353 | None:intergenic | 50.0% | |
| CTGGCATTTACAGATTGCCC+AGG | + | chr1_3:4937442-4937461 | Msa0098930:intron | 50.0% | |
| CAGAATCAGACTGAGGACCT+GGG | - | chr1_3:4937462-4937481 | None:intergenic | 50.0% | |
| AGGCCGCTAACTTCACCATT+AGG | - | chr1_3:4938364-4938383 | None:intergenic | 50.0% | |
| AGGATGTCTACCACCTAACG+AGG | - | chr1_3:4938484-4938503 | None:intergenic | 50.0% | |
| TTGTTCATGTGGGAGGGTGA+TGG | + | chr1_3:4938579-4938598 | Msa0098930:intron | 50.0% | |
| CACTTCCCTGTGTTCCTCAT+TGG | + | chr1_3:4938780-4938799 | Msa0098930:intron | 50.0% | |
| CCTTCCCAATGAGGAACACA+GGG | - | chr1_3:4938788-4938807 | None:intergenic | 50.0% | |
| CCTGTGTTCCTCATTGGGAA+GGG | + | chr1_3:4938786-4938805 | Msa0098930:intron | 50.0% | |
| GTCAACATCCCTTCCCAATG+AGG | - | chr1_3:4938797-4938816 | None:intergenic | 50.0% | |
| TGACCTTGAGCATCTGCTAC+AGG | + | chr1_3:4938813-4938832 | Msa0098930:intron | 50.0% | |
| GTTTGATGGAGATCAGAGCG+AGG | + | chr1_3:4938849-4938868 | Msa0098930:intron | 50.0% | |
| AGTGTGGTAGGCTGCTTAGT+TGG | + | chr1_3:4938931-4938950 | Msa0098930:intron | 50.0% | |
| GTGAAGATTGATGGGGACTG+AGG | + | chr1_3:4938997-4939016 | Msa0098930:intron | 50.0% | |
| !! | AGCTTGGCTCTGGTGTAGAT+TGG | + | chr1_3:4939077-4939096 | Msa0098930:intron | 50.0% |
| !! | GCTTGGCTCTGGTGTAGATT+GGG | + | chr1_3:4939078-4939097 | Msa0098930:intron | 50.0% |
| CTGTGTATCTCCCAATTCCC+TGG | - | chr1_3:4939387-4939406 | None:intergenic | 50.0% | |
| CGCTGAAATGGTTGTAGTGG+GGG | + | chr1_3:4939507-4939526 | Msa0098930:intron | 50.0% | |
| ! | TGAAATGGTTGTAGTGGGGG+TGG | + | chr1_3:4939510-4939529 | Msa0098930:intron | 50.0% |
| ! | GAAATGGTTGTAGTGGGGGT+GGG | + | chr1_3:4939511-4939530 | Msa0098930:intron | 50.0% |
| ! | AAATGGTTGTAGTGGGGGTG+GGG | + | chr1_3:4939512-4939531 | Msa0098930:intron | 50.0% |
| !! | ATGGGAAAAGGAGTTGGTGG+TGG | + | chr1_3:4939596-4939615 | Msa0098930:intron | 50.0% |
| ATAGGTGGAAGTGGGAAGGA+GGG | + | chr1_3:4939667-4939686 | Msa0098930:intron | 50.0% | |
| !! | TGGAGTGGGCTAAAGAGGTT+TGG | + | chr1_3:4939759-4939778 | Msa0098930:intron | 50.0% |
| ! | ATGTCGGTTGGAGGCAAAAG+AGG | + | chr1_3:4939803-4939822 | Msa0098930:intron | 50.0% |
| ! | TGTCGGTTGGAGGCAAAAGA+GGG | + | chr1_3:4939804-4939823 | Msa0098930:intron | 50.0% |
| GGCTGTGGTAAACTCGAAGA+AGG | + | chr1_3:4939860-4939879 | Msa0098930:intron | 50.0% | |
| TAACTGAAAAACACGGCGCC+AGG | - | chr1_3:4940199-4940218 | None:intergenic | 50.0% | |
| GGTTGCCATTGCCGAAAGAA+TGG | + | chr1_3:4940717-4940736 | Msa0098930:CDS | 50.0% | |
| AGTGGCCATTCTTTCGGCAA+TGG | - | chr1_3:4940725-4940744 | None:intergenic | 50.0% | |
| ! | TTGTCAGGAAAGGGAGGTGT+TGG | + | chr1_3:4940766-4940785 | Msa0098930:CDS | 50.0% |
| AGCTAACGCAAATGCCAGCT+GGG | - | chr1_3:4940809-4940828 | None:intergenic | 50.0% | |
| TGGCATTTGCGTTAGCTGCA+AGG | + | chr1_3:4940812-4940831 | Msa0098930:CDS | 50.0% | |
| GGCATTTGCGTTAGCTGCAA+GGG | + | chr1_3:4940813-4940832 | Msa0098930:CDS | 50.0% | |
| !! | CCAAGCATCTTTGGGATGCT+TGG | - | chr1_3:4940877-4940896 | None:intergenic | 50.0% |
| CCAAGCATCCCAAAGATGCT+TGG | + | chr1_3:4940874-4940893 | Msa0098930:CDS | 50.0% | |
| CCTTCTAGGCCAAGCATCTT+TGG | - | chr1_3:4940886-4940905 | None:intergenic | 50.0% | |
| CCAAAGATGCTTGGCCTAGA+AGG | + | chr1_3:4940883-4940902 | Msa0098930:CDS | 50.0% | |
| GAGATACACCAGAGCAACCT+TGG | + | chr1_3:4940910-4940929 | Msa0098930:CDS | 50.0% | |
| TACACCAGAGCAACCTTGGT+TGG | + | chr1_3:4940914-4940933 | Msa0098930:CDS | 50.0% | |
| CATAGACAGGAGACCAACCA+AGG | - | chr1_3:4940930-4940949 | None:intergenic | 50.0% | |
| TGGAGAGGTCCACGCAAAAA+TGG | + | chr1_3:4941015-4941034 | Msa0098930:CDS | 50.0% | |
| GGAGAGGTCCACGCAAAAAT+GGG | + | chr1_3:4941016-4941035 | Msa0098930:CDS | 50.0% | |
| CTAATTGTTGATGCTCCGCC+TGG | + | chr1_3:4941087-4941106 | Msa0098930:CDS | 50.0% | |
| ! | TGTTCATCTGAGGTTCCAGG+CGG | - | chr1_3:4941105-4941124 | None:intergenic | 50.0% |
| CAAGGGAGGGGAAGGGAAAA+GGG | - | chr1_3:4937043-4937062 | None:intergenic | 55.0% | |
| ACAAGGGAGGGGAAGGGAAA+AGG | - | chr1_3:4937044-4937063 | None:intergenic | 55.0% | |
| TCCCTTCCCCTCCCTTGTTA+CGG | + | chr1_3:4937046-4937065 | Msa0098930:intron | 55.0% | |
| GCAGAATCAGACTGAGGACC+TGG | - | chr1_3:4937463-4937482 | None:intergenic | 55.0% | |
| GGTCCTCAGTCTGATTCTGC+TGG | + | chr1_3:4937463-4937482 | Msa0098930:CDS | 55.0% | |
| CAACCAGGGTCAGGTCCTTT+AGG | - | chr1_3:4937541-4937560 | None:intergenic | 55.0% | |
| CTAAAGGACCTGACCCTGGT+TGG | + | chr1_3:4937539-4937558 | Msa0098930:intron | 55.0% | |
| !! | GAAGAGTACCAACCAGGGTC+AGG | - | chr1_3:4937550-4937569 | None:intergenic | 55.0% |
| CCCTGTGTTCCTCATTGGGA+AGG | + | chr1_3:4938785-4938804 | Msa0098930:intron | 55.0% | |
| CCCTTCCCAATGAGGAACAC+AGG | - | chr1_3:4938789-4938808 | None:intergenic | 55.0% | |
| GAGCCTGTAGCAGATGCTCA+AGG | - | chr1_3:4938819-4938838 | None:intergenic | 55.0% | |
| TGGTAGGCTGCTTAGTTGGC+AGG | + | chr1_3:4938935-4938954 | Msa0098930:intron | 55.0% | |
| CTCTCTCGGCCTAACTGTGA+TGG | - | chr1_3:4939037-4939056 | None:intergenic | 55.0% | |
| TTCTCCTTCTCCGAGGAGCT+TGG | + | chr1_3:4939061-4939080 | Msa0098930:intron | 55.0% | |
| TACACCAGAGCCAAGCTCCT+CGG | - | chr1_3:4939074-4939093 | None:intergenic | 55.0% | |
| ! | AATGGTTGTAGTGGGGGTGG+GGG | + | chr1_3:4939513-4939532 | Msa0098930:intron | 55.0% |
| TGGCGAGGGGGAATTGGATA+AGG | + | chr1_3:4939562-4939581 | Msa0098930:intron | 55.0% | |
| CGAGGGGGAATTGGATAAGG+AGG | + | chr1_3:4939565-4939584 | Msa0098930:intron | 55.0% | |
| GATAGGTGGAAGTGGGAAGG+AGG | + | chr1_3:4939666-4939685 | Msa0098930:intron | 55.0% | |
| !! | GGAAGTGGAGTGGGCTAAAG+AGG | + | chr1_3:4939754-4939773 | Msa0098930:intron | 55.0% |
| GTCGGTTGGAGGCAAAAGAG+GGG | + | chr1_3:4939805-4939824 | Msa0098930:intron | 55.0% | |
| !! | CTGGTCTTGTCAGGAAAGGG+AGG | + | chr1_3:4940760-4940779 | Msa0098930:CDS | 55.0% |
| ! | GAGCACATTTTCTGCCCAGC+TGG | + | chr1_3:4940792-4940811 | Msa0098930:CDS | 55.0% |
| CAGCTAACGCAAATGCCAGC+TGG | - | chr1_3:4940810-4940829 | None:intergenic | 55.0% | |
| GAGACCAACCAAGGTTGCTC+TGG | - | chr1_3:4940921-4940940 | None:intergenic | 55.0% | |
| !! | GATTTGAGATGGGCTGGGAC+AGG | - | chr1_3:4941284-4941303 | None:intergenic | 55.0% |
| ! | GAGATGGCGGTACCCTTTCT+TGG | + | chr1_3:4941459-4941478 | Msa0098930:CDS | 55.0% |
| GGCGGTACCCTTTCTTGGTA+AGG | + | chr1_3:4941464-4941483 | Msa0098930:CDS | 55.0% | |
| CTTTGCAAGGCAGCCGAAGA+AGG | + | chr1_3:4941504-4941523 | Msa0098930:CDS | 55.0% | |
| GCCGTAACAAGGGAGGGGAA+GGG | - | chr1_3:4937050-4937069 | None:intergenic | 60.0% | |
| CTTCCCCTCCCTTGTTACGG+CGG | + | chr1_3:4937049-4937068 | Msa0098930:intron | 60.0% | |
| AATCGCGGCCGCCGTAACAA+GGG | - | chr1_3:4937060-4937079 | None:intergenic | 60.0% | |
| AAATCGCGGCCGCCGTAACA+AGG | - | chr1_3:4937061-4937080 | None:intergenic | 60.0% | |
| GCTCCTAAAGGACCTGACCC+TGG | + | chr1_3:4937535-4937554 | Msa0098930:intron | 60.0% | |
| AGAGCCAAGCTCCTCGGAGA+AGG | - | chr1_3:4939068-4939087 | None:intergenic | 60.0% | |
| TTCTCCGAGGAGCTTGGCTC+TGG | + | chr1_3:4939067-4939086 | Msa0098930:intron | 60.0% | |
| ! | ATGGTTGTAGTGGGGGTGGG+GGG | + | chr1_3:4939514-4939533 | Msa0098930:intron | 60.0% |
| TCGGCTGCCTTGCAAAGCTG+TGG | - | chr1_3:4941501-4941520 | None:intergenic | 60.0% | |
| GTGACGACGATGACTCCGGC+AGG | - | chr1_3:4937007-4937026 | None:intergenic | 65.0% | |
| GCGGGTGACGACGATGACTC+CGG | - | chr1_3:4937011-4937030 | None:intergenic | 65.0% | |
| AGTCATCGTCGTCACCCGCC+AGG | + | chr1_3:4937012-4937031 | Msa0098930:CDS | 65.0% | |
| CGCCGTAACAAGGGAGGGGA+AGG | - | chr1_3:4937051-4937070 | None:intergenic | 65.0% | |
| GTTACGGCGGCCGCGATTTG+CGG | + | chr1_3:4937062-4937081 | Msa0098930:intron | 65.0% | |
| ! | TGGTTGTAGTGGGGGTGGGG+GGG | + | chr1_3:4939515-4939534 | Msa0098930:intron | 65.0% |
| CGGCCGCCGTAACAAGGGAG+GGG | - | chr1_3:4937055-4937074 | None:intergenic | 70.0% | |
| GCGGCCGCCGTAACAAGGGA+GGG | - | chr1_3:4937056-4937075 | None:intergenic | 70.0% | |
| AGGGCCGCCACCGCAAATCG+CGG | - | chr1_3:4937075-4937094 | None:intergenic | 70.0% | |
| ! | GGTTGTAGTGGGGGTGGGGG+GGG | + | chr1_3:4939516-4939535 | Msa0098930:intron | 70.0% |
| ! | GTTGTAGTGGGGGTGGGGGG+GGG | + | chr1_3:4939517-4939536 | Msa0098930:intron | 70.0% |
| ! | TTGTAGTGGGGGTGGGGGGG+GGG | + | chr1_3:4939518-4939537 | Msa0098930:intron | 70.0% |
| GGGGGATGGCGAGGGGGAAT+TGG | + | chr1_3:4939556-4939575 | Msa0098930:intron | 70.0% | |
| CGCGGCCGCCGTAACAAGGG+AGG | - | chr1_3:4937057-4937076 | None:intergenic | 75.0% | |
| ACGGCGGCCGCGATTTGCGG+TGG | + | chr1_3:4937065-4937084 | Msa0098930:intron | 75.0% | |
| GCGGCCGCGATTTGCGGTGG+CGG | + | chr1_3:4937068-4937087 | Msa0098930:intron | 75.0% | |
| ! | TGTAGTGGGGGTGGGGGGGG+GGG | + | chr1_3:4939519-4939538 | Msa0098930:intron | 75.0% |
| !! | GTAGTGGGGGTGGGGGGGGG+GGG | + | chr1_3:4939520-4939539 | Msa0098930:intron | 80.0% |
| ! | TAGTGGGGGTGGGGGGGGGG+GGG | + | chr1_3:4939521-4939540 | Msa0098930:intron | 80.0% |
| ! | AGTGGGGGTGGGGGGGGGGG+GGG | + | chr1_3:4939522-4939541 | Msa0098930:intron | 85.0% |
| ! | GGGGGGGGGGGGGATGGCGA+GGG | + | chr1_3:4939548-4939567 | Msa0098930:intron | 85.0% |
| ! | GGGGGGGGGGGGATGGCGAG+GGG | + | chr1_3:4939549-4939568 | Msa0098930:intron | 85.0% |
| ! | GGGGGGGGGGGATGGCGAGG+GGG | + | chr1_3:4939550-4939569 | Msa0098930:intron | 85.0% |
| ! | GTGGGGGTGGGGGGGGGGGG+GGG | + | chr1_3:4939523-4939542 | Msa0098930:intron | 90.0% |
| ! | TGGGGGTGGGGGGGGGGGGG+GGG | + | chr1_3:4939524-4939543 | Msa0098930:intron | 90.0% |
| ! | GGGGGGGGGGGGGGATGGCG+AGG | + | chr1_3:4939547-4939566 | Msa0098930:intron | 90.0% |
| ! | GGGGGTGGGGGGGGGGGGGG+GGG | + | chr1_3:4939525-4939544 | Msa0098930:intron | 95.0% |
| ! | GGGGTGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939526-4939545 | Msa0098930:intron | 95.0% |
| ! | GGGTGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939527-4939546 | Msa0098930:intron | 95.0% |
| ! | GGTGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939528-4939547 | Msa0098930:intron | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939529-4939548 | Msa0098930:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_3:4939530-4939549 | Msa0098930:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+TGG | + | chr1_3:4939542-4939561 | Msa0098930:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 4936948 | 4941995 | 4936948 | ID=Msa0098930;Name=Msa0098930 |
| chr1_3 | mRNA | 4936948 | 4941995 | 4936948 | ID=Msa0098930-mRNA-1;Parent=Msa0098930;Name=Msa0098930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.66|0.75|1|0.66|0.75|4|354|376 |
| chr1_3 | exon | 4936948 | 4937033 | 4936948 | ID=Msa0098930-mRNA-1:exon:1742;Parent=Msa0098930-mRNA-1 |
| chr1_3 | exon | 4937284 | 4937348 | 4937284 | ID=Msa0098930-mRNA-1:exon:1743;Parent=Msa0098930-mRNA-1 |
| chr1_3 | exon | 4937455 | 4937505 | 4937455 | ID=Msa0098930-mRNA-1:exon:1744;Parent=Msa0098930-mRNA-1 |
| chr1_3 | exon | 4940713 | 4941995 | 4940713 | ID=Msa0098930-mRNA-1:exon:1745;Parent=Msa0098930-mRNA-1 |
| chr1_3 | CDS | 4936948 | 4937033 | 4936948 | ID=Msa0098930-mRNA-1:cds;Parent=Msa0098930-mRNA-1 |
| chr1_3 | CDS | 4937284 | 4937348 | 4937284 | ID=Msa0098930-mRNA-1:cds;Parent=Msa0098930-mRNA-1 |
| chr1_3 | CDS | 4937455 | 4937505 | 4937455 | ID=Msa0098930-mRNA-1:cds;Parent=Msa0098930-mRNA-1 |
| chr1_3 | CDS | 4940713 | 4941641 | 4940713 | ID=Msa0098930-mRNA-1:cds;Parent=Msa0098930-mRNA-1 |
| chr1_3 | three_prime_UTR | 4941642 | 4941995 | 4941642 | ID=Msa0098930-mRNA-1:three_prime_utr;Parent=Msa0098930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
