AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0765180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765180 MtrunA17_Chr5g0416081 98.077 312 6 0 43 354 1 312 0.0 630
Msa0765180 MtrunA17_Chr3g0120881 32.759 232 151 3 45 275 1 228 2.45e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765180 AT1G27000.1 44.551 312 163 5 45 354 1 304 6.64e-86 262
Msa0765180 AT2G02730.3 45.977 261 131 3 45 305 1 251 5.30e-77 238
Msa0765180 AT2G02730.1 45.977 261 131 3 45 305 1 251 5.30e-77 238
Msa0765180 AT2G02730.2 45.977 261 131 3 45 305 1 251 5.30e-77 238
Msa0765180 AT1G04960.1 38.528 231 132 3 45 272 1 224 5.84e-48 164
Msa0765180 AT1G04960.2 38.356 219 125 3 57 272 30 241 3.45e-44 155
Msa0765180 AT1G24265.2 24.464 233 165 5 53 280 5 231 2.73e-17 82.4
Msa0765180 AT1G24265.1 24.464 233 165 5 53 280 5 231 2.73e-17 82.4
Msa0765180 AT1G24265.3 25.701 214 148 5 60 268 47 254 4.66e-17 82.0
Msa0765180 AT1G24267.1 25.532 235 164 4 51 280 3 231 8.10e-12 66.2
Msa0765180 AT1G24267.2 26.271 236 162 5 51 280 3 232 6.94e-11 63.2

Find 102 sgRNAs with CRISPR-Local

Find 725 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAAAGTAGTCACTATTT+TGG 0.169488 5_2:+25740744 None:intergenic
ATGGGATTGGACTATATTAT+TGG 0.190078 5_2:-25742925 Msa0765180:CDS
GACCCAGAGAATTCAAATTT+TGG 0.210369 5_2:-25744406 Msa0765180:CDS
CATCCAAAATTTGAATTCTC+TGG 0.218747 5_2:+25744403 None:intergenic
TATATTCAAGTTAGTGATTT+GGG 0.278066 5_2:-25740888 Msa0765180:three_prime_UTR
GAATTCAGTGCTTGAGAATC+AGG 0.292398 5_2:-25743125 Msa0765180:intron
TGATTTGATCGGTGATCTTC+AGG 0.298477 5_2:-25748235 Msa0765180:intron
CTATATTCAAGTTAGTGATT+TGG 0.307343 5_2:-25740889 Msa0765180:three_prime_UTR
GTAGACCTCCCTGGAAGTTT+TGG 0.311620 5_2:+25742279 None:intergenic
CTGCCACGAGGACTTTGTTT+TGG 0.319988 5_2:+25748528 None:intergenic
TTGCGTAGCTATATGCTTGC+AGG 0.320870 5_2:+25748480 None:intergenic
ACCTTGGGTGCTGTGGGTTA+TGG 0.321412 5_2:-25746751 Msa0765180:CDS
GCTCACATATCCAGGATTTC+AGG 0.324581 5_2:-25742250 Msa0765180:intron
TACTATTGTGCCGGGTGGTT+TGG 0.326973 5_2:-25741995 Msa0765180:CDS
TAAGATGGCACAGTCAATTA+AGG 0.334952 5_2:-25744361 Msa0765180:CDS
CTATATTATTGGCTTTATTA+CGG 0.335288 5_2:-25742914 Msa0765180:CDS
GTTGCAGGAAGTTGCAAATA+TGG 0.336219 5_2:-25742944 Msa0765180:intron
CGCCGATGCCATTGCTGCTC+AGG 0.350306 5_2:-25747087 Msa0765180:intron
TTTGCCTTAGATTCGGCGTT+TGG 0.357235 5_2:-25746968 Msa0765180:intron
GTGGTTCCAGCTGCCACCTT+GGG 0.360760 5_2:-25746766 Msa0765180:CDS
AGCTGCCACCTTGGGTGCTG+TGG 0.363248 5_2:-25746758 Msa0765180:CDS
TGAAGCTGACCTGTCTAAAC+TGG 0.370395 5_2:+25742020 None:intergenic
GTTGGAAAAGTCCGGGGATC+AGG 0.371091 5_2:-25747132 Msa0765180:CDS
TACCCGTTACGGCGATGAAT+AGG 0.376180 5_2:+25748381 None:intergenic
CTGTCAAAAGGAATTTAGTT+TGG 0.383268 5_2:-25740840 Msa0765180:three_prime_UTR
CAAAAGCAATTGGCATAAAC+AGG 0.388317 5_2:+25740809 None:intergenic
GTCCTATTCATCGCCGTAAC+GGG 0.391258 5_2:-25748383 Msa0765180:intron
GACAAACCATAGTAATGAAT+GGG 0.396947 5_2:-25746915 Msa0765180:CDS
ATGGCTTATCATAGTGGAAT+CGG 0.413245 5_2:-25748416 Msa0765180:CDS
AAGGAACAACCAAAACTTCC+AGG 0.426194 5_2:-25742288 Msa0765180:CDS
TAGAAGAACACCTGAAATCC+TGG 0.436728 5_2:+25742240 None:intergenic
AGCTTCAGATACTATTGTGC+CGG 0.449268 5_2:-25742004 Msa0765180:CDS
GTGAAAGGGTTGGAAAAGTC+CGG 0.450195 5_2:-25747140 Msa0765180:CDS
CTACTTCGACCAAGTGTTGA+TGG 0.450224 5_2:-25741082 Msa0765180:exon
ATCCAAAATTTGAATTCTCT+GGG 0.454696 5_2:+25744404 None:intergenic
AAGAAAATTGAGCTGTCAAA+AGG 0.454760 5_2:-25740852 Msa0765180:three_prime_UTR
TTGCAGGAAGTTGCAAATAT+GGG 0.456775 5_2:-25742943 Msa0765180:intron
TGTGGTTCCAGCTGCCACCT+TGG 0.458676 5_2:-25746767 Msa0765180:CDS
ATGCCACATTCAAAAGCAAT+TGG 0.463829 5_2:+25740799 None:intergenic
ACAGCACCCAAGGTGGCAGC+TGG 0.465085 5_2:+25746760 None:intergenic
AGACAAACCATAGTAATGAA+TGG 0.473819 5_2:-25746916 Msa0765180:CDS
TCTCTCTAACGCCATGGCTA+TGG 0.474338 5_2:-25748435 Msa0765180:CDS
AGGTAATTTGTCATCTCTTG+TGG 0.475135 5_2:-25746785 Msa0765180:CDS
ACTAGTATGCTCACATATCC+AGG 0.485153 5_2:-25742258 Msa0765180:CDS
TAAAGAGTCCGGCACTCTCC+GGG 0.489134 5_2:+25742885 None:intergenic
GCTGCCACCTTGGGTGCTGT+GGG 0.493152 5_2:-25746757 Msa0765180:CDS
TAGCTATATGCTTGCAGGGA+AGG 0.502410 5_2:+25748485 None:intergenic
TGCTCATAGGCACTAGTGAA+AGG 0.502471 5_2:-25747155 Msa0765180:intron
CACAACAGAAAGTCATTAGC+AGG 0.508141 5_2:+25740967 None:intergenic
GCTTTATTACGGCAAATGCC+CGG 0.508354 5_2:-25742903 Msa0765180:CDS
AGGTATATTATGATTTATGC+AGG 0.509670 5_2:+25740987 None:intergenic
GCTCATAGGCACTAGTGAAA+GGG 0.511781 5_2:-25747154 Msa0765180:intron
GGAAGTTGCAAATATGGGAT+TGG 0.520895 5_2:-25742938 Msa0765180:CDS
GGCAAATGCCCGGAGAGTGC+CGG 0.523005 5_2:-25742893 Msa0765180:CDS
TGAAAGGGTTGGAAAAGTCC+GGG 0.525822 5_2:-25747139 Msa0765180:CDS
TTCACCTTCAGCCTGATCCC+CGG 0.530274 5_2:+25747121 None:intergenic
AGCAGCGAAGGCCGTTGTTG+AGG 0.531539 5_2:-25741960 Msa0765180:intron
TGGCTTATCATAGTGGAATC+GGG 0.534196 5_2:-25748415 Msa0765180:CDS
AGTCATTGTCCAGTTTAGAC+AGG 0.534631 5_2:-25742029 Msa0765180:CDS
TTATACCCTCTCAGGATGGA+AGG 0.536817 5_2:-25743150 Msa0765180:intron
GGTCCTATTCATCGCCGTAA+CGG 0.538733 5_2:-25748384 Msa0765180:CDS
GTTTGTTACCTGAGCAGCAA+TGG 0.542711 5_2:+25747079 None:intergenic
CTGAGCAGCAATGGCATCGG+CGG 0.543224 5_2:+25747088 None:intergenic
AATGCGCAAACAATATAAGA+TGG 0.548314 5_2:-25744376 Msa0765180:CDS
TATATGCTTGCAGGGAAGGA+AGG 0.548869 5_2:+25748489 None:intergenic
TTATGGTTACATGTGGTTGA+AGG 0.557263 5_2:-25746734 Msa0765180:intron
ATGGCTATGGCTTATCATAG+TGG 0.557647 5_2:-25748422 Msa0765180:CDS
GCTTCAGATACTATTGTGCC+GGG 0.558234 5_2:-25742003 Msa0765180:CDS
GGCAAATTATCTGATTTGAT+CGG 0.562791 5_2:-25748246 Msa0765180:CDS
ATACCCACCTGTAAAGAGTC+CGG 0.564924 5_2:+25742874 None:intergenic
GGGGATCAGGCTGAAGGTGA+AGG 0.565982 5_2:-25747119 Msa0765180:CDS
GAGACCTTGCCATCAACACT+TGG 0.578373 5_2:+25741073 None:intergenic
TGCGTAGCTATATGCTTGCA+GGG 0.578590 5_2:+25748481 None:intergenic
ACCATAACCCACAGCACCCA+AGG 0.581009 5_2:+25746750 None:intergenic
ATAGGCACTAGTGAAAGGGT+TGG 0.586495 5_2:-25747150 Msa0765180:intron
AAGTCCGGGGATCAGGCTGA+AGG 0.588920 5_2:-25747125 Msa0765180:CDS
GCAACACACAGTGGCAATGT+TGG 0.591450 5_2:-25743678 Msa0765180:intron
GAAGAAGGAAGTACCCGTTA+CGG 0.592744 5_2:+25748370 None:intergenic
AGCATACTAGTAGACCTCCC+TGG 0.594208 5_2:+25742270 None:intergenic
TACGGCGATGAATAGGACCT+TGG 0.595103 5_2:+25748388 None:intergenic
AGAGAGAGAGACCTGTGTGA+AGG 0.595305 5_2:+25748455 None:intergenic
TACCTGAGCAGCAATGGCAT+CGG 0.596170 5_2:+25747085 None:intergenic
TCGACCAAGTGTTGATGGCA+AGG 0.603236 5_2:-25741077 Msa0765180:exon
CTGTGGGTTATGGTTACATG+TGG 0.610059 5_2:-25746741 Msa0765180:CDS
AGGAACAACCAAAACTTCCA+GGG 0.613013 5_2:-25742287 Msa0765180:CDS
ATAATCTAGAGAAGCAGCGA+AGG 0.617542 5_2:-25741972 Msa0765180:CDS
GTACGTGACTAAACGCAACA+TGG 0.628631 5_2:-25746419 Msa0765180:CDS
TAGTGGAATCGGGATCTCCA+AGG 0.639289 5_2:-25748405 Msa0765180:CDS
ACAAACCATAGTAATGAATG+GGG 0.647379 5_2:-25746914 Msa0765180:CDS
TCAGATACTATTGTGCCGGG+TGG 0.669543 5_2:-25742000 Msa0765180:CDS
GCTAAATCAAACCTCAACAA+CGG 0.699768 5_2:+25741949 None:intergenic
TCTAGATTATCCAAACCACC+CGG 0.701858 5_2:+25741985 None:intergenic
GAAAGGGTTGGAAAAGTCCG+GGG 0.701993 5_2:-25747138 Msa0765180:CDS
ACTATGATAAGCCATAGCCA+TGG 0.702387 5_2:+25748424 None:intergenic
GCTACGCAAAGCCTTCACAC+AGG 0.706589 5_2:-25748466 Msa0765180:CDS
ACTTACAGCAATGACATCCG+AGG 0.707335 5_2:+25746357 None:intergenic
TAGCCAAAACAAAGTCCTCG+TGG 0.710403 5_2:-25748531 Msa0765180:CDS
GAGCGTCGTGCAACACACAG+TGG 0.711634 5_2:-25743687 Msa0765180:CDS
CAAACCATAGTAATGAATGG+GGG 0.730627 5_2:-25746913 Msa0765180:CDS
AACAACCAAAACTTCCAGGG+AGG 0.731667 5_2:-25742284 Msa0765180:CDS
ATAACCCACAGCACCCAAGG+TGG 0.751370 5_2:+25746753 None:intergenic
AAGAAAGCAATACTGCCACG+AGG 0.797542 5_2:+25748516 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTATTTTTTTAT+AGG - chr5_2:25743017-25743036 Msa0765180:intron 0.0%
!!! TTATTTTTTATTTTTTTATA+GGG - chr5_2:25743018-25743037 Msa0765180:intron 0.0%
!!! ATTTTAAAAAATTAAAAATA+TGG - chr5_2:25743199-25743218 Msa0765180:intron 0.0%
!!! TTATTTTTTATTTTTTTATA+GGG + chr5_2:25743018-25743037 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTTAT+AGG + chr5_2:25743017-25743036 None:intergenic 0.0%
!!! TTTTAGTTTAATAAAATAAG+AGG + chr5_2:25741446-25741465 None:intergenic 10.0%
!!! AAAAGTTCAATTTTAAAATA+GGG + chr5_2:25741476-25741495 None:intergenic 10.0%
!!! TATTTTAAAATTGAACTTTT+CGG - chr5_2:25741476-25741495 Msa0765180:intron 10.0%
!!! TAGTTTGAATTTAATATTTT+GGG + chr5_2:25742666-25742685 None:intergenic 10.0%
!!! TTAGTTTGAATTTAATATTT+TGG + chr5_2:25742667-25742686 None:intergenic 10.0%
!!! ACTTTTTTTTTTTAAACTTT+CGG + chr5_2:25742771-25742790 None:intergenic 10.0%
!!! TATTTTTAAAATTTTTACAG+GGG + chr5_2:25744330-25744349 None:intergenic 10.0%
!!! TAATTTTTTAAAAAAAATGC+TGG - chr5_2:25743132-25743151 Msa0765180:CDS 10.0%
!! ATTAAAATAATTTAATGATG+TGG + chr5_2:25743263-25743282 None:intergenic 10.0%
!!! TTTTTCGAAATTTAAAAAAT+TGG - chr5_2:25743446-25743465 Msa0765180:intron 10.0%
!!! TATTTTTAAAATTTTTACAG+GGG - chr5_2:25744330-25744349 Msa0765180:intron 10.0%
!!! ATTATTTTAGAAATATCAAA+TGG + chr5_2:25746780-25746799 None:intergenic 10.0%
!! ACAAAAAACTTTAATAAAAA+AGG - chr5_2:25747871-25747890 Msa0765180:intron 10.0%
!! TACAATTTATATATATATGA+TGG - chr5_2:25749489-25749508 Msa0765180:intron 10.0%
!! ACAATTTATATATATATGAT+GGG - chr5_2:25749490-25749509 Msa0765180:intron 10.0%
!!! TATTTGTTTATTTTTATTAG+TGG - chr5_2:25750433-25750452 Msa0765180:intron 10.0%
!!! TCTATATAAAAATTTTATAC+TGG + chr5_2:25751805-25751824 None:intergenic 10.0%
!! TTTATGTTAGATTAGTAAAT+GGG - chr5_2:25740803-25740822 Msa0765180:three_prime_UTR 15.0%
!!! TTTTCATAACTTATTAGTTA+AGG - chr5_2:25741190-25741209 Msa0765180:intron 15.0%
!!! CAATTTTGTTCTTTAATTTA+TGG + chr5_2:25741301-25741320 None:intergenic 15.0%
!!! TTAATCGATTTAAAAATTGA+AGG - chr5_2:25741379-25741398 Msa0765180:intron 15.0%
!!! AAAGTTCAATTTTAAAATAG+GGG + chr5_2:25741475-25741494 None:intergenic 15.0%
!!! GAAAAGTTCAATTTTAAAAT+AGG + chr5_2:25741477-25741496 None:intergenic 15.0%
!!! TATTTTTGTGAATTTGATAA+AGG - chr5_2:25741714-25741733 Msa0765180:intron 15.0%
!!! ATTTTTGTGAATTTGATAAA+GGG - chr5_2:25741715-25741734 Msa0765180:intron 15.0%
!! TCTATTTAATGAAAACTTAA+GGG + chr5_2:25741996-25742015 None:intergenic 15.0%
!! ATCTATTTAATGAAAACTTA+AGG + chr5_2:25741997-25742016 None:intergenic 15.0%
!!! TACTAAATTTTTAAAACTAG+AGG - chr5_2:25742591-25742610 Msa0765180:intron 15.0%
!!! ACTAAATTTTTAAAACTAGA+GGG - chr5_2:25742592-25742611 Msa0765180:intron 15.0%
!!! ATTTTTAAAATTTTTACAGG+GGG + chr5_2:25744331-25744350 None:intergenic 15.0%
!! TAAAAAATTGGAAAAAAGTT+CGG - chr5_2:25743458-25743477 Msa0765180:intron 15.0%
!! TAGAAGATATTTAAAAATAC+TGG - chr5_2:25743496-25743515 Msa0765180:intron 15.0%
!! AAATTACTGAAGAATAAAAT+TGG - chr5_2:25743859-25743878 Msa0765180:intron 15.0%
!! TAAATCATATGATTGTTAAT+CGG - chr5_2:25743954-25743973 Msa0765180:intron 15.0%
!! ATAAACTATAATAACTTTCA+TGG - chr5_2:25744104-25744123 Msa0765180:intron 15.0%
!!! ATTTTTAAAATTTTTACAGG+GGG - chr5_2:25744331-25744350 Msa0765180:intron 15.0%
!!! TTATATATTTTTTTGCTCAT+AGG - chr5_2:25746119-25746138 Msa0765180:intron 15.0%
!!! ACTATTATAGTTTGTATTAT+AGG - chr5_2:25747202-25747221 Msa0765180:intron 15.0%
!!! TTATAGTTTTATTTTTCTCT+TGG + chr5_2:25747428-25747447 None:intergenic 15.0%
!!! TAAACCTTAGTTAATTTTTT+TGG + chr5_2:25747480-25747499 None:intergenic 15.0%
!! TAATGTAATTGATATAGTAA+TGG - chr5_2:25747920-25747939 Msa0765180:intron 15.0%
!! AATGTAATTGATATAGTAAT+GGG - chr5_2:25747921-25747940 Msa0765180:intron 15.0%
!!! TTTTAAAATCATTCTGTAAT+TGG + chr5_2:25748185-25748204 None:intergenic 15.0%
!! CCTTAAATTTATTCTTAAAA+CGG - chr5_2:25748562-25748581 Msa0765180:intron 15.0%
!! CTTAAATTTATTCTTAAAAC+GGG - chr5_2:25748563-25748582 Msa0765180:intron 15.0%
!! TTTATTAATATTGGAATGTT+GGG - chr5_2:25749332-25749351 Msa0765180:intron 15.0%
!!! ACGTTTTTTTGAAATAAAAA+AGG + chr5_2:25750614-25750633 None:intergenic 15.0%
!!! TTTACAAAATTTTGAAAACA+TGG + chr5_2:25750746-25750765 None:intergenic 15.0%
!! AAAATATTATTATGTCATGA+AGG + chr5_2:25752108-25752127 None:intergenic 15.0%
!! GTTTATGTTAGATTAGTAAA+TGG - chr5_2:25740802-25740821 Msa0765180:three_prime_UTR 20.0%
!!! CAATATGTTAGTTGTATTTT+TGG - chr5_2:25741419-25741438 Msa0765180:intron 20.0%
!!! AAGTTCAATTTTAAAATAGG+GGG + chr5_2:25741474-25741493 None:intergenic 20.0%
!!! ACCTTTAAAATTGTGAATTT+TGG - chr5_2:25741537-25741556 Msa0765180:intron 20.0%
!! TAAAACGTAGAGAAAATATT+AGG - chr5_2:25741892-25741911 Msa0765180:intron 20.0%
!! AAAACGTAGAGAAAATATTA+GGG - chr5_2:25741893-25741912 Msa0765180:intron 20.0%
!! GTCATTTAAAGAAAACTTAA+GGG + chr5_2:25741935-25741954 None:intergenic 20.0%
!!! TGTCATTTAAAGAAAACTTA+AGG + chr5_2:25741936-25741955 None:intergenic 20.0%
!!! TTATTTCTACATAAAACTAG+AGG + chr5_2:25742159-25742178 None:intergenic 20.0%
!! TAAATTGTTGATACTTGAAA+TGG + chr5_2:25742284-25742303 None:intergenic 20.0%
!!! CAAGTATCAACAATTTATTT+TGG - chr5_2:25742287-25742306 Msa0765180:CDS 20.0%
!! AGAAATCGATTAATATTCTT+TGG + chr5_2:25742357-25742376 None:intergenic 20.0%
!! CTAAAGATTTGGATTAATAT+TGG - chr5_2:25742451-25742470 Msa0765180:intron 20.0%
!! AATGTTAGTAAACTAACAAA+TGG - chr5_2:25742542-25742561 Msa0765180:intron 20.0%
!!! CTAAATTTTTAAAACTAGAG+GGG - chr5_2:25742593-25742612 Msa0765180:intron 20.0%
!! TAAGTGAAATAACTATTTAC+AGG - chr5_2:25742716-25742735 Msa0765180:intron 20.0%
!! AGTAATTAATCATTCCAATT+AGG - chr5_2:25742788-25742807 Msa0765180:intron 20.0%
!! GTAATTAATCATTCCAATTA+GGG - chr5_2:25742789-25742808 Msa0765180:intron 20.0%
!!! TTTTTGCGAAATAAAAAAAC+TGG - chr5_2:25743553-25743572 Msa0765180:intron 20.0%
!! AAGAAAGGAAAAAAAATATC+GGG + chr5_2:25743687-25743706 None:intergenic 20.0%
!! GAAGAAAGGAAAAAAAATAT+CGG + chr5_2:25743688-25743707 None:intergenic 20.0%
!!! AATATTGACGAAATTTTTCA+GGG + chr5_2:25743780-25743799 None:intergenic 20.0%
!! ATATGATTAGAGAAATGATT+AGG - chr5_2:25743889-25743908 Msa0765180:intron 20.0%
!! GATTAACAATCATATGATTT+AGG + chr5_2:25743955-25743974 None:intergenic 20.0%
!! GGAATTATAATTAGAGAAAA+GGG + chr5_2:25744027-25744046 None:intergenic 20.0%
!! TTCCCTAAAATCAATTATAT+TGG - chr5_2:25744043-25744062 Msa0765180:intron 20.0%
!! TCCCTAAAATCAATTATATT+GGG - chr5_2:25744044-25744063 Msa0765180:intron 20.0%
!!! ACCCAATATAATTGATTTTA+GGG + chr5_2:25744048-25744067 None:intergenic 20.0%
!!! TACCCAATATAATTGATTTT+AGG + chr5_2:25744049-25744068 None:intergenic 20.0%
!! TAACTAATTCCTTTATGATT+GGG + chr5_2:25744158-25744177 None:intergenic 20.0%
!! ACATAAAAGAGAAAATAAAC+CGG - chr5_2:25744200-25744219 Msa0765180:intron 20.0%
!! ATATAATGACTTAATTGGAA+CGG + chr5_2:25744650-25744669 None:intergenic 20.0%
!!! TTACCAAACATAGATAATTT+TGG + chr5_2:25744683-25744702 None:intergenic 20.0%
!! AAGAAAAGTAAAGTGAAATT+TGG + chr5_2:25745094-25745113 None:intergenic 20.0%
!!! AAAAACAAGTTATTTTTCTC+TGG + chr5_2:25745436-25745455 None:intergenic 20.0%
!!! AGAAAAATAACTTGTTTTTG+CGG - chr5_2:25745437-25745456 Msa0765180:intron 20.0%
!! ACATTTAAAAAATCAATGAG+AGG + chr5_2:25746467-25746486 None:intergenic 20.0%
!! AAATCACTCATAAACATAAA+CGG + chr5_2:25746755-25746774 None:intergenic 20.0%
!! ATAGTAACTTTATCAATAGA+AGG + chr5_2:25747187-25747206 None:intergenic 20.0%
!! TCAACCAAAAAAATTAACTA+AGG - chr5_2:25747473-25747492 Msa0765180:intron 20.0%
!! AGGTTTATGAGAATAAAAAT+AGG - chr5_2:25747493-25747512 Msa0765180:intron 20.0%
!!! TACCAATTTTAGTTGTTTTT+AGG + chr5_2:25747535-25747554 None:intergenic 20.0%
!! GTAAATATACCATGTAATAT+GGG + chr5_2:25747607-25747626 None:intergenic 20.0%
!! AACTTTAATAAAAAAGGAGT+AGG - chr5_2:25747877-25747896 Msa0765180:intron 20.0%
!!! ATGATTTTAAAAAACCATCA+AGG - chr5_2:25748193-25748212 Msa0765180:intron 20.0%
!! TTTGGATAATTAAGAGTAAA+TGG - chr5_2:25748460-25748479 Msa0765180:CDS 20.0%
!!! CCGTTTTAAGAATAAATTTA+AGG + chr5_2:25748565-25748584 None:intergenic 20.0%
!! TCAATTCAAAGATTTAACAT+GGG - chr5_2:25748763-25748782 Msa0765180:intron 20.0%
!! AGAAGCAATTAAAATTTAGA+AGG + chr5_2:25748826-25748845 None:intergenic 20.0%
!! TCAAAATCAATAACTTCTAA+AGG + chr5_2:25749163-25749182 None:intergenic 20.0%
!! TGTTGCATCTTTATTAATAT+TGG - chr5_2:25749323-25749342 Msa0765180:intron 20.0%
!! CTTTATTAATATTGGAATGT+TGG - chr5_2:25749331-25749350 Msa0765180:intron 20.0%
!! TAACTAACTCGTAAAATTAT+AGG + chr5_2:25749380-25749399 None:intergenic 20.0%
!!! TATAATTTTACGAGTTAGTT+AGG - chr5_2:25749379-25749398 Msa0765180:intron 20.0%
!!! CAAATGATAGTTTTGTTTTT+TGG + chr5_2:25749789-25749808 None:intergenic 20.0%
!! TAAATCTGAATTATGATCTA+TGG - chr5_2:25749924-25749943 Msa0765180:intron 20.0%
!! AAGAATGATTCAAATAAAAG+TGG + chr5_2:25750110-25750129 None:intergenic 20.0%
!! AACTACTTTGCAAATTTAAA+GGG + chr5_2:25750204-25750223 None:intergenic 20.0%
!! AAACTACTTTGCAAATTTAA+AGG + chr5_2:25750205-25750224 None:intergenic 20.0%
!!! GTTAAATCAGTTTTATTGTT+GGG + chr5_2:25750317-25750336 None:intergenic 20.0%
!!! AGTTAAATCAGTTTTATTGT+TGG + chr5_2:25750318-25750337 None:intergenic 20.0%
!!! CTATATTATTGGCTTTATTA+CGG - chr5_2:25750373-25750392 Msa0765180:intron 20.0%
!!! ATGTTATATCTTGTATTTTC+AGG - chr5_2:25750965-25750984 Msa0765180:intron 20.0%
!!! TGTTATATCTTGTATTTTCA+GGG - chr5_2:25750966-25750985 Msa0765180:intron 20.0%
!! AAAATAGATAACAAAGTACA+AGG + chr5_2:25751073-25751092 None:intergenic 20.0%
!! GTACATATTATTAAATTGTG+AGG + chr5_2:25751507-25751526 None:intergenic 20.0%
!! TTTATATAGAAATCTAGTTG+TGG - chr5_2:25751815-25751834 Msa0765180:intron 20.0%
!! CATATTGAATATACAAATCA+AGG - chr5_2:25751874-25751893 Msa0765180:intron 20.0%
!!! TAACTATTTTTGTGATAAAC+TGG + chr5_2:25752001-25752020 None:intergenic 20.0%
!! TTTACTATACAAAGCAATAA+AGG - chr5_2:25752138-25752157 Msa0765180:intron 20.0%
!!! TATATTCAAGTTAGTGATTT+GGG - chr5_2:25752399-25752418 Msa0765180:intron 20.0%
! GTAACATGTTATGTTATTGA+AGG - chr5_2:25740849-25740868 Msa0765180:three_prime_UTR 25.0%
!! TTTTTGGATGGAACAAAAAT+TGG - chr5_2:25741079-25741098 Msa0765180:exon 25.0%
! AATACACAGTCATATTCATT+TGG + chr5_2:25741231-25741250 None:intergenic 25.0%
!! CGGTCTCTTTATTATAATTT+TGG - chr5_2:25741496-25741515 Msa0765180:intron 25.0%
!! GCCAAAATTCACAATTTTAA+AGG + chr5_2:25741541-25741560 None:intergenic 25.0%
!!! AAGACATATTATCACTTTTG+AGG + chr5_2:25741563-25741582 None:intergenic 25.0%
! TATGTCTTTAGATTCAATCT+TGG - chr5_2:25741575-25741594 Msa0765180:intron 25.0%
! ATGTCTTTAGATTCAATCTT+GGG - chr5_2:25741576-25741595 Msa0765180:intron 25.0%
!!! AATTGTTGCAATTTTGATCT+CGG + chr5_2:25741658-25741677 None:intergenic 25.0%
! ATTTAAAGAAAACTTAAGGG+AGG + chr5_2:25741932-25741951 None:intergenic 25.0%
!!! TGTCTATTTTAAAACTAGAG+GGG + chr5_2:25741966-25741985 None:intergenic 25.0%
!!! GTGTCTATTTTAAAACTAGA+GGG + chr5_2:25741967-25741986 None:intergenic 25.0%
!!! AGTGTCTATTTTAAAACTAG+AGG + chr5_2:25741968-25741987 None:intergenic 25.0%
! ATTTAATGAAAACTTAAGGG+AGG + chr5_2:25741993-25742012 None:intergenic 25.0%
! AGATAAGTTTATGAGAAAGA+GGG + chr5_2:25742089-25742108 None:intergenic 25.0%
!! TCTTTTCTACGAAAACTATT+TGG + chr5_2:25742203-25742222 None:intergenic 25.0%
!! AAATAGTTTTCGTAGAAAAG+AGG - chr5_2:25742202-25742221 Msa0765180:intron 25.0%
!! AATAGTTTTCGTAGAAAAGA+GGG - chr5_2:25742203-25742222 Msa0765180:intron 25.0%
! TAAATGAAAACAAGTAGAAG+AGG - chr5_2:25742392-25742411 Msa0765180:intron 25.0%
! TTAATCCAAATCTTTAGACA+TGG + chr5_2:25742448-25742467 None:intergenic 25.0%
! AAGATTTGGATTAATATTGG+TGG - chr5_2:25742454-25742473 Msa0765180:intron 25.0%
! AGATTTGGATTAATATTGGT+GGG - chr5_2:25742455-25742474 Msa0765180:intron 25.0%
! AAAAACGTATTAACCCTAAT+TGG + chr5_2:25742805-25742824 None:intergenic 25.0%
!!! TCGAAAGAATCTTTTTTACA+GGG + chr5_2:25744578-25744597 None:intergenic 25.0%
!!! ATCGAAAGAATCTTTTTTAC+AGG + chr5_2:25744577-25744596 None:intergenic 25.0%
! GAATCTTTATATTACAAGGT+TGG + chr5_2:25744553-25744572 None:intergenic 25.0%
! TTTGATAAAACATAAACCGT+TGG - chr5_2:25743621-25743640 Msa0765180:intron 25.0%
! TAAGAGAATAAGATGAAGAA+AGG + chr5_2:25743702-25743721 None:intergenic 25.0%
! AATATTGATGAAGATGATGA+AGG + chr5_2:25743728-25743747 None:intergenic 25.0%
!! GAATATTGACGAAATTTTTC+AGG + chr5_2:25743781-25743800 None:intergenic 25.0%
! GAAAAATTTCGTCAATATTC+AGG - chr5_2:25743781-25743800 Msa0765180:intron 25.0%
! ATATTCAGGATGTATGTTAA+TGG - chr5_2:25743795-25743814 Msa0765180:intron 25.0%
! TATTCAGGATGTATGTTAAT+GGG - chr5_2:25743796-25743815 Msa0765180:intron 25.0%
!! CAAAAAAACATGTTTTCCTA+AGG + chr5_2:25743828-25743847 None:intergenic 25.0%
! GGGAATTATAATTAGAGAAA+AGG + chr5_2:25744028-25744047 None:intergenic 25.0%
! CTAACTAATTCCTTTATGAT+TGG + chr5_2:25744159-25744178 None:intergenic 25.0%
! AATTAGTTAGACATCATCAA+AGG - chr5_2:25744169-25744188 Msa0765180:intron 25.0%
! GATGGAATCTTTATATTACA+AGG - chr5_2:25744549-25744568 Msa0765180:intron 25.0%
! GAATCTTTATATTACAAGGT+TGG - chr5_2:25744553-25744572 Msa0765180:intron 25.0%
!!! TCGAAAGAATCTTTTTTACA+TGG - chr5_2:25744578-25744597 Msa0765180:intron 25.0%
!!! CGAAAGAATCTTTTTTACAT+GGG - chr5_2:25744579-25744598 Msa0765180:intron 25.0%
!!! GAAAGAATCTTTTTTACATG+GGG - chr5_2:25744580-25744599 Msa0765180:intron 25.0%
! ATGCGATATAATGACTTAAT+TGG + chr5_2:25744655-25744674 None:intergenic 25.0%
!!! AAACATAGATAATTTTGGAG+GGG + chr5_2:25744678-25744697 None:intergenic 25.0%
!! CAAACATAGATAATTTTGGA+GGG + chr5_2:25744679-25744698 None:intergenic 25.0%
! AATTCACATGTCAAATTCTA+CGG - chr5_2:25745127-25745146 Msa0765180:intron 25.0%
!! AGTAGATTGATTTCGTATAA+AGG - chr5_2:25745214-25745233 Msa0765180:intron 25.0%
! TATAAGTTGTTTATCGAAAC+AGG + chr5_2:25745537-25745556 None:intergenic 25.0%
!!! GTTGTTTTTATACGCTATAT+TGG - chr5_2:25745884-25745903 Msa0765180:intron 25.0%
!!! ATAAGTTTTGTGAAACTGTT+TGG + chr5_2:25745975-25745994 None:intergenic 25.0%
!!! TTGCAACATTCCAATTTTTT+GGG + chr5_2:25746035-25746054 None:intergenic 25.0%
!!! ATTGCAACATTCCAATTTTT+TGG + chr5_2:25746036-25746055 None:intergenic 25.0%
!!! ATTTTTAGTCTTTTGATGCT+AGG - chr5_2:25746054-25746073 Msa0765180:intron 25.0%
! GTAATAGTTTCATTACTTTG+TGG - chr5_2:25746606-25746625 Msa0765180:intron 25.0%
! AAGTATTTCTTGCTTCATAA+AGG - chr5_2:25746652-25746671 Msa0765180:intron 25.0%
! AGTATTTCTTGCTTCATAAA+GGG - chr5_2:25746653-25746672 Msa0765180:intron 25.0%
! AAGTATTTCTTGCTTCATAA+AGG - chr5_2:25746652-25746671 Msa0765180:intron 25.0%
! AGTATTTCTTGCTTCATAAA+GGG - chr5_2:25746653-25746672 Msa0765180:intron 25.0%
! AGAATATTCAATGCAGTAAA+TGG + chr5_2:25746958-25746977 None:intergenic 25.0%
! AATAGAAGGAAAAAAACTCT+AGG + chr5_2:25747173-25747192 None:intergenic 25.0%
! TATTATAGGAAGACTTGAAT+TGG - chr5_2:25747216-25747235 Msa0765180:intron 25.0%
! ATTATAGGAAGACTTGAATT+GGG - chr5_2:25747217-25747236 Msa0765180:intron 25.0%
! CGTAAATATACCATGTAATA+TGG + chr5_2:25747608-25747627 None:intergenic 25.0%
! AATATAATGTGCTTCTATAC+TGG - chr5_2:25748158-25748177 Msa0765180:intron 25.0%
!! TTTACTGTTCAAAAGTACAT+AGG - chr5_2:25748260-25748279 Msa0765180:CDS 25.0%
!!! ATTTGTTGTCCTTAATATGA+GGG - chr5_2:25748666-25748685 Msa0765180:intron 25.0%
! CTCAATTCAAAGATTTAACA+TGG - chr5_2:25748762-25748781 Msa0765180:intron 25.0%
! ATCCAAAATTTGAATTCTCT+GGG + chr5_2:25748886-25748905 None:intergenic 25.0%
! GTCTTGATGAATATCTATAT+TGG - chr5_2:25749191-25749210 Msa0765180:intron 25.0%
! TAAGTAAGATAAACTCTCTT+TGG - chr5_2:25749230-25749249 Msa0765180:intron 25.0%
! ATGTTTGAATTCATGATGTT+TGG - chr5_2:25749633-25749652 Msa0765180:intron 25.0%
!! TAGTTTAGAGTTATGAAGAA+GGG - chr5_2:25749684-25749703 Msa0765180:intron 25.0%
!!! TTTTGTTTTTTGGTGTAAAC+CGG + chr5_2:25749779-25749798 None:intergenic 25.0%
!! ATAAAACTGATTTAACTGTG+TGG - chr5_2:25750321-25750340 Msa0765180:intron 25.0%
! GGTACAAAGTAAAAACAAAA+TGG + chr5_2:25750725-25750744 None:intergenic 25.0%
! TTTGAAAACAATACTGTTTC+AGG - chr5_2:25750779-25750798 Msa0765180:intron 25.0%
! TTAATAATTAAGCCACTAGA+TGG + chr5_2:25750946-25750965 None:intergenic 25.0%
!! TAGTCTGTCATTTGATAATA+CGG - chr5_2:25751115-25751134 Msa0765180:intron 25.0%
!!! ACTAAACAACTTTTAGAAGT+GGG + chr5_2:25751536-25751555 None:intergenic 25.0%
!!! AACTAAACAACTTTTAGAAG+TGG + chr5_2:25751537-25751556 None:intergenic 25.0%
! TGAAAACATAATGAAGCTTA+AGG - chr5_2:25751574-25751593 Msa0765180:intron 25.0%
! TGTAAATAAAACTACCTAAC+TGG + chr5_2:25751635-25751654 None:intergenic 25.0%
!!! AGGTAGTTTTATTTACACAT+AGG - chr5_2:25751638-25751657 Msa0765180:intron 25.0%
! CAACTTCAAACAAACATTTA+GGG - chr5_2:25751674-25751693 Msa0765180:intron 25.0%
!!! TATTTTTGTGATAAACTGGA+CGG + chr5_2:25751997-25752016 None:intergenic 25.0%
!! AGCAATAGATATTCTCTTTT+TGG + chr5_2:25752081-25752100 None:intergenic 25.0%
! AGGTATATTATGATTTATGC+AGG + chr5_2:25752303-25752322 None:intergenic 25.0%
!! CTATATTCAAGTTAGTGATT+TGG - chr5_2:25752398-25752417 Msa0765180:intron 25.0%
ACATAAACAAGCAAGAAGAA+AGG + chr5_2:25740790-25740809 None:intergenic 30.0%
TAGTAAATGGGAAATGAGAA+AGG - chr5_2:25740815-25740834 Msa0765180:three_prime_UTR 30.0%
! TCTTTTCCCTCAAAATTGAA+GGG - chr5_2:25741146-25741165 Msa0765180:intron 30.0%
! GTTTAACCCTTCAATTTTGA+GGG + chr5_2:25741155-25741174 None:intergenic 30.0%
! TGTTTAACCCTTCAATTTTG+AGG + chr5_2:25741156-25741175 None:intergenic 30.0%
AATTTATGGTTACCACAACA+CGG + chr5_2:25741287-25741306 None:intergenic 30.0%
CACCAAGAATCGTTATATTA+GGG - chr5_2:25741619-25741638 Msa0765180:intron 30.0%
AAGGGTTATGCTAACAAAAA+AGG - chr5_2:25741733-25741752 Msa0765180:intron 30.0%
!!! GTCTATTTTAAAACTAGAGG+GGG + chr5_2:25741965-25741984 None:intergenic 30.0%
CAGATAAGTTTATGAGAAAG+AGG + chr5_2:25742090-25742109 None:intergenic 30.0%
CTCTTTCTCATAAACTTATC+TGG - chr5_2:25742088-25742107 Msa0765180:intron 30.0%
AACTAGAGGTCATTCAATTA+AGG + chr5_2:25742145-25742164 None:intergenic 30.0%
AGTCTGATATGAGTTATGAA+AGG - chr5_2:25742314-25742333 Msa0765180:intron 30.0%
ATGCATTCAATCATATAGAG+AGG - chr5_2:25742495-25742514 Msa0765180:intron 30.0%
TGCATTCAATCATATAGAGA+GGG - chr5_2:25742496-25742515 Msa0765180:intron 30.0%
TGGTTAACAGAGTTAAATTG+AGG - chr5_2:25742562-25742581 Msa0765180:intron 30.0%
GGTTAACAGAGTTAAATTGA+GGG - chr5_2:25742563-25742582 Msa0765180:intron 30.0%
GTTAACAGAGTTAAATTGAG+GGG - chr5_2:25742564-25742583 Msa0765180:intron 30.0%
!!! AATTTTTAAAACTAGAGGGG+AGG - chr5_2:25742596-25742615 Msa0765180:intron 30.0%
! TGTCTTTTAACCAAACCTTA+AGG - chr5_2:25742623-25742642 Msa0765180:intron 30.0%
! GTCTTTTAACCAAACCTTAA+GGG - chr5_2:25742624-25742643 Msa0765180:intron 30.0%
ACTTTCGGTTCTTAAGAAAA+TGG + chr5_2:25742756-25742775 None:intergenic 30.0%
!!! GAAAGAATCTTTTTTACAGG+GGG + chr5_2:25742859-25742878 None:intergenic 30.0%
!!! CGAAAGAATCTTTTTTACAG+GGG + chr5_2:25742860-25742879 None:intergenic 30.0%
GACGGAATCTTTATATTACA+AGG + chr5_2:25742890-25742909 None:intergenic 30.0%
!!! ATTTTTTTATAGGGTACACG+TGG - chr5_2:25743027-25743046 Msa0765180:intron 30.0%
! AATAGACGTCTAAAATCCAA+CGG + chr5_2:25743640-25743659 None:intergenic 30.0%
!!! TCAGGGTTATGATTTTTTCT+GGG + chr5_2:25743763-25743782 None:intergenic 30.0%
!!! TTCAGGGTTATGATTTTTTC+TGG + chr5_2:25743764-25743783 None:intergenic 30.0%
ATTCAGGATGTATGTTAATG+GGG - chr5_2:25743797-25743816 Msa0765180:intron 30.0%
CATTTATGACCCAATCATAA+AGG - chr5_2:25744146-25744165 Msa0765180:intron 30.0%
AAAAAAATTGTTCGGTCTTC+CGG + chr5_2:25744222-25744241 None:intergenic 30.0%
!!! ATTTTTTTATAGGGTACACG+TGG + chr5_2:25743027-25743046 None:intergenic 30.0%
! GTTTTTACCCCTTGTAATAT+AGG + chr5_2:25744620-25744639 None:intergenic 30.0%
! CCAAACATAGATAATTTTGG+AGG + chr5_2:25744680-25744699 None:intergenic 30.0%
CCTCCAAAATTATCTATGTT+TGG - chr5_2:25744677-25744696 Msa0765180:intron 30.0%
!!! ATAATTTGCCGTTTTTGAAG+AGG + chr5_2:25745031-25745050 None:intergenic 30.0%
! GGCAAATTATCTGATTTGAT+CGG - chr5_2:25745041-25745060 Msa0765180:intron 30.0%
!!! AGGGTTTCAGATTTTTTTTC+TGG - chr5_2:25745272-25745291 Msa0765180:intron 30.0%
!!! GGGTTTCAGATTTTTTTTCT+GGG - chr5_2:25745273-25745292 Msa0765180:intron 30.0%
!!! GGTTTCAGATTTTTTTTCTG+GGG - chr5_2:25745274-25745293 Msa0765180:intron 30.0%
!!! GTTTCAGATTTTTTTTCTGG+GGG - chr5_2:25745275-25745294 Msa0765180:intron 30.0%
!!! TTTCAGATTTTTTTTCTGGG+GGG - chr5_2:25745276-25745295 Msa0765180:intron 30.0%
TATTCTTGAGTTCGATTCAT+GGG + chr5_2:25745329-25745348 None:intergenic 30.0%
ATATTCTTGAGTTCGATTCA+TGG + chr5_2:25745330-25745349 None:intergenic 30.0%
ATTGTGACAATAAATGCCTT+TGG - chr5_2:25745380-25745399 Msa0765180:intron 30.0%
GAAAATGACTCCAAATTTGT+GGG + chr5_2:25745408-25745427 None:intergenic 30.0%
AGAAAATGACTCCAAATTTG+TGG + chr5_2:25745409-25745428 None:intergenic 30.0%
TCTCCCAACTAGATAAATAT+AGG - chr5_2:25745737-25745756 Msa0765180:intron 30.0%
AGGCCTATATTTATCTAGTT+GGG + chr5_2:25745743-25745762 None:intergenic 30.0%
TAGATAAATATAGGCCTGTT+TGG - chr5_2:25745746-25745765 Msa0765180:intron 30.0%
AATAAGTTGTTTGTCCAAAC+AGG + chr5_2:25745763-25745782 None:intergenic 30.0%
! TTTGAAGCTTATAACACAAG+TGG - chr5_2:25745781-25745800 Msa0765180:intron 30.0%
!! TGTTTGTATTGGCTTATTTG+AGG + chr5_2:25746010-25746029 None:intergenic 30.0%
TCAAATAAGCCAATACAAAC+AGG - chr5_2:25746009-25746028 Msa0765180:intron 30.0%
! TTTGATGCTAGGATTTGTTT+CGG - chr5_2:25746065-25746084 Msa0765180:intron 30.0%
AGACAAACCATAGTAATGAA+TGG - chr5_2:25746371-25746390 Msa0765180:CDS 30.0%
GACAAACCATAGTAATGAAT+GGG - chr5_2:25746372-25746391 Msa0765180:CDS 30.0%
ACAAACCATAGTAATGAATG+GGG - chr5_2:25746373-25746392 Msa0765180:CDS 30.0%
! TTCTATTTTGTCATCTAGTG+TGG - chr5_2:25746416-25746435 Msa0765180:CDS 30.0%
! AATGTTTTTCCCTTTTCTGT+AGG - chr5_2:25746482-25746501 Msa0765180:intron 30.0%
GACAAATTACCTACAGAAAA+GGG + chr5_2:25746494-25746513 None:intergenic 30.0%
TGACAAATTACCTACAGAAA+AGG + chr5_2:25746495-25746514 None:intergenic 30.0%
ATATCAAACGTTATGTCAAG+AGG + chr5_2:25747084-25747103 None:intergenic 30.0%
AACATCTGTCTTGTGAAAAA+AGG + chr5_2:25747147-25747166 None:intergenic 30.0%
TTGAAGCATACTATACTGTA+GGG - chr5_2:25747240-25747259 Msa0765180:intron 30.0%
AAATAGGTCATAAACCTCAT+TGG - chr5_2:25747509-25747528 Msa0765180:intron 30.0%
GGCCTAAAAACAACTAAAAT+TGG - chr5_2:25747530-25747549 Msa0765180:intron 30.0%
ACTTCAATTCCCATATTACA+TGG - chr5_2:25747595-25747614 Msa0765180:intron 30.0%
CAGAAACTTTGTGATTGATA+AGG + chr5_2:25747669-25747688 None:intergenic 30.0%
AATCACAAAGTTTCTGATGT+GGG - chr5_2:25747673-25747692 Msa0765180:intron 30.0%
ACACATTTGAAAAAGTTGAC+AGG + chr5_2:25747789-25747808 None:intergenic 30.0%
TCAAATGTGTCAATTACCAT+CGG - chr5_2:25747799-25747818 Msa0765180:intron 30.0%
AAATTAAATCCAAAAGCCGA+TGG + chr5_2:25747818-25747837 None:intergenic 30.0%
GGTGTATATATTTATCGAGT+TGG - chr5_2:25747942-25747961 Msa0765180:intron 30.0%
TATATGTCTTGGAATAGTTG+AGG + chr5_2:25748375-25748394 None:intergenic 30.0%
TCAACTATTCCAAGACATAT+AGG - chr5_2:25748374-25748393 Msa0765180:intron 30.0%
CAACTATTCCAAGACATATA+GGG - chr5_2:25748375-25748394 Msa0765180:intron 30.0%
AACTATTCCAAGACATATAG+GGG - chr5_2:25748376-25748395 Msa0765180:intron 30.0%
TTTCCAGTGTTAAAAGAGAT+AGG + chr5_2:25748402-25748421 None:intergenic 30.0%
ATAGAAATCTTACATACCCT+AGG - chr5_2:25748434-25748453 Msa0765180:CDS 30.0%
TAGAAATCTTACATACCCTA+GGG - chr5_2:25748435-25748454 Msa0765180:CDS 30.0%
TTAATTATCCAAAGTCCCTA+GGG + chr5_2:25748453-25748472 None:intergenic 30.0%
! TTGCTGTCACAATATTTTTC+CGG - chr5_2:25748486-25748505 Msa0765180:CDS 30.0%
TGTTAAAAACTGTTGCAGTT+TGG + chr5_2:25748533-25748552 None:intergenic 30.0%
CTCATATTAAGGACAACAAA+TGG + chr5_2:25748667-25748686 None:intergenic 30.0%
!! CATTTGTTGTCCTTAATATG+AGG - chr5_2:25748665-25748684 Msa0765180:intron 30.0%
AATATCTCCAGAAAAACAGT+GGG + chr5_2:25748725-25748744 None:intergenic 30.0%
AAATATCTCCAGAAAAACAG+TGG + chr5_2:25748726-25748745 None:intergenic 30.0%
TGAATTGAGTGCATAATGAT+GGG + chr5_2:25748751-25748770 None:intergenic 30.0%
TTGAATTGAGTGCATAATGA+TGG + chr5_2:25748752-25748771 None:intergenic 30.0%
! TTGCTTCTCAATGTTTTTCA+TGG - chr5_2:25748838-25748857 Msa0765180:intron 30.0%
CATCCAAAATTTGAATTCTC+TGG + chr5_2:25748887-25748906 None:intergenic 30.0%
AATGCGCAAACAATATAAGA+TGG - chr5_2:25748911-25748930 Msa0765180:intron 30.0%
GGTCACATGTATCTTTATAT+AGG + chr5_2:25748999-25749018 None:intergenic 30.0%
TGTGTATCCAAAAATCTGTT+TGG + chr5_2:25749020-25749039 None:intergenic 30.0%
TCTATGTAGACTTACCTATA+AGG - chr5_2:25749095-25749114 Msa0765180:intron 30.0%
!! GCTATTTCTTTGCAGATAAA+TGG - chr5_2:25749128-25749147 Msa0765180:intron 30.0%
! TCTTTGCAGATAAATGGATT+AGG - chr5_2:25749134-25749153 Msa0765180:intron 30.0%
CAATTTCAATTCCATTATCC+AGG + chr5_2:25749450-25749469 None:intergenic 30.0%
ACATTGTAATACTCTTGTAC+AGG - chr5_2:25749534-25749553 Msa0765180:intron 30.0%
TGGCTTATTAATTGTTAACG+TGG - chr5_2:25749653-25749672 Msa0765180:intron 30.0%
! CTAGTTTAGAGTTATGAAGA+AGG - chr5_2:25749683-25749702 Msa0765180:intron 30.0%
!!! AGTTATGAAGAAGGGTATTT+TGG - chr5_2:25749692-25749711 Msa0765180:intron 30.0%
AGTCTATAGTCCTAATAAGT+AGG - chr5_2:25750052-25750071 Msa0765180:intron 30.0%
TACTATGCAACCTACTTATT+AGG + chr5_2:25750065-25750084 None:intergenic 30.0%
! ATCAATCCGTTTCTTTTGTT+TGG - chr5_2:25750236-25750255 Msa0765180:intron 30.0%
GATCTTCCAAACAAAAGAAA+CGG + chr5_2:25750245-25750264 None:intergenic 30.0%
TACATAATCTATTCAATGCC+TGG - chr5_2:25750267-25750286 Msa0765180:intron 30.0%
ACATAATCTATTCAATGCCT+GGG - chr5_2:25750268-25750287 Msa0765180:intron 30.0%
ATGGGATTGGACTATATTAT+TGG - chr5_2:25750362-25750381 Msa0765180:intron 30.0%
CCATACATAACTGAAACATT+CGG + chr5_2:25750508-25750527 None:intergenic 30.0%
TGTTTCAGTTATGTATGGTT+TGG - chr5_2:25750510-25750529 Msa0765180:intron 30.0%
GTGTAAACATAAATCGATAG+TGG - chr5_2:25750854-25750873 Msa0765180:intron 30.0%
!! AAATGTCAGTTCTAGATACA+AGG + chr5_2:25750893-25750912 None:intergenic 30.0%
! AGTCTGTCATTTGATAATAC+GGG - chr5_2:25751116-25751135 Msa0765180:intron 30.0%
TAACATGCTTACATTCTAAG+TGG - chr5_2:25751406-25751425 Msa0765180:intron 30.0%
! CATTATTGTTTTCACCAGTT+AGG - chr5_2:25751618-25751637 Msa0765180:intron 30.0%
! CCTAAATGTTTGTTTGAAGT+TGG + chr5_2:25751676-25751695 None:intergenic 30.0%
CCAACTTCAAACAAACATTT+AGG - chr5_2:25751673-25751692 Msa0765180:intron 30.0%
!! ACAAACATTTAGGGTCATTT+TGG - chr5_2:25751683-25751702 Msa0765180:intron 30.0%
CTTTCGTATTATTCAACTGA+TGG - chr5_2:25751756-25751775 Msa0765180:intron 30.0%
! TGTGGACTGTTAAAACAAAT+TGG - chr5_2:25751833-25751852 Msa0765180:intron 30.0%
! GTGGACTGTTAAAACAAATT+GGG - chr5_2:25751834-25751853 Msa0765180:intron 30.0%
TGGACTGTTAAAACAAATTG+GGG - chr5_2:25751835-25751854 Msa0765180:intron 30.0%
GCATCATTTATTTATGGCAA+AGG + chr5_2:25751935-25751954 None:intergenic 30.0%
ATAAATAAATGATGCTGCAG+CGG - chr5_2:25751940-25751959 Msa0765180:intron 30.0%
AAGAAAATTGAGCTGTCAAA+AGG - chr5_2:25752435-25752454 Msa0765180:intron 30.0%
CTGTCAAAAGGAATTTAGTT+TGG - chr5_2:25752447-25752466 Msa0765180:intron 30.0%
! CTAGAAAGTAGTCACTATTT+TGG + chr5_2:25752546-25752565 Msa0765190:CDS 30.0%
TGGGTTTGTAGTTGTTGAAT+AGG - chr5_2:25740713-25740732 Msa0765180:three_prime_UTR 35.0%
GTAGTTGTTGAATAGGATTG+TGG - chr5_2:25740720-25740739 Msa0765180:three_prime_UTR 35.0%
GTCATAGATGAGGTTCATTA+AGG - chr5_2:25741027-25741046 Msa0765180:three_prime_UTR 35.0%
TTCCATCCAAAAATCGATCT+CGG + chr5_2:25741072-25741091 None:intergenic 35.0%
! CTCTTTTCCCTCAAAATTGA+AGG - chr5_2:25741145-25741164 Msa0765180:intron 35.0%
ACACGGTCTCTCAAAAAATA+AGG + chr5_2:25741270-25741289 None:intergenic 35.0%
GCACCAAGAATCGTTATATT+AGG - chr5_2:25741618-25741637 Msa0765180:intron 35.0%
TGCCCTAATATAACGATTCT+TGG + chr5_2:25741624-25741643 None:intergenic 35.0%
!! AAGAGAGTGTTAAGAGAGAA+GGG + chr5_2:25742028-25742047 None:intergenic 35.0%
!! TAAGAGAGTGTTAAGAGAGA+AGG + chr5_2:25742029-25742048 None:intergenic 35.0%
TGTTGCCATGTCTAAAGATT+TGG - chr5_2:25742440-25742459 Msa0765180:intron 35.0%
GAGGGTAATTCATAGCATTA+AGG - chr5_2:25742514-25742533 Msa0765180:intron 35.0%
! TTTTAACCAAACCTTAAGGG+AGG - chr5_2:25742627-25742646 Msa0765180:intron 35.0%
AATTACAAAGACCTCCCTTA+AGG + chr5_2:25742641-25742660 None:intergenic 35.0%
! GTTTTTACCCCCTGTAATAT+AGG - chr5_2:25742819-25742838 Msa0765180:intron 35.0%
TTCAGGATGTATGTTAATGG+GGG - chr5_2:25743798-25743817 Msa0765180:intron 35.0%
!! AGAAAAGGGCTTTGAGTTAA+GGG + chr5_2:25744013-25744032 None:intergenic 35.0%
! AATTTTTACAGGGGGAAAAC+TGG - chr5_2:25744339-25744358 Msa0765180:intron 35.0%
TGGAACTTGCCTAAATTACA+GGG - chr5_2:25744359-25744378 Msa0765180:CDS 35.0%
GTCTTTATCCCCTGTAATTT+AGG + chr5_2:25744371-25744390 None:intergenic 35.0%
!!! CTTTTTTACATGGGGAAAAC+CGG - chr5_2:25744588-25744607 Msa0765180:intron 35.0%
! ATGTTTGGTAATCCAACCAA+CGG - chr5_2:25744692-25744711 Msa0765180:intron 35.0%
! ATGGCTTATCATAGTGGAAT+CGG - chr5_2:25744871-25744890 Msa0765180:intron 35.0%
TGTCATGTCATGTCATCATT+AGG - chr5_2:25745252-25745271 Msa0765180:intron 35.0%
GTCATGTCATGTCATCATTA+GGG - chr5_2:25745253-25745272 Msa0765180:intron 35.0%
CCAGTTATAGCAACTAGAAA+GGG + chr5_2:25745507-25745526 None:intergenic 35.0%
TAGTTGCTATAACTGGCTAT+AGG - chr5_2:25745511-25745530 Msa0765180:intron 35.0%
! CATGTCATAAGCTCTTTTCA+CGG - chr5_2:25745712-25745731 Msa0765180:intron 35.0%
! ATGTCATAAGCTCTTTTCAC+GGG - chr5_2:25745713-25745732 Msa0765180:intron 35.0%
CAGGCCTATATTTATCTAGT+TGG + chr5_2:25745744-25745763 None:intergenic 35.0%
!!! TTTTTTGGGCCTGTTTGTAT+TGG + chr5_2:25746021-25746040 None:intergenic 35.0%
TACAAACAGGCCCAAAAAAT+TGG - chr5_2:25746022-25746041 Msa0765180:intron 35.0%
TTCGAAAATGCACTTGAAAG+AGG - chr5_2:25746261-25746280 Msa0765180:intron 35.0%
GTTCAACTTTGCCTTAGATT+CGG - chr5_2:25746312-25746331 Msa0765180:intron 35.0%
CAAACCATAGTAATGAATGG+GGG - chr5_2:25746374-25746393 Msa0765180:CDS 35.0%
! AGGTAATTTGTCATCTCTTG+TGG - chr5_2:25746502-25746521 Msa0765180:intron 35.0%
TTATGGTTACATGTGGTTGA+AGG - chr5_2:25746553-25746572 Msa0765180:intron 35.0%
TGATATTCCTTCAACTGAGT+TGG - chr5_2:25747098-25747117 Msa0765180:CDS 35.0%
TATTTCACCAACTCAGTTGA+AGG + chr5_2:25747108-25747127 None:intergenic 35.0%
GTTGAAGCATACTATACTGT+AGG - chr5_2:25747239-25747258 Msa0765180:intron 35.0%
ATGAGTGAACTTAGTTCAAC+CGG - chr5_2:25747269-25747288 Msa0765180:intron 35.0%
!!! TAGTTGTTTTTAGGCCAATG+AGG + chr5_2:25747526-25747545 None:intergenic 35.0%
CAATCACAAAGTTTCTGATG+TGG - chr5_2:25747672-25747691 Msa0765180:intron 35.0%
! TATGTATAGCTCGATTCGTT+TGG + chr5_2:25747976-25747995 None:intergenic 35.0%
AGCTATACATAGCTCAAGTT+CGG - chr5_2:25747985-25748004 Msa0765180:intron 35.0%
! AAATAGTTTGAGACTCGGTT+CGG + chr5_2:25748089-25748108 None:intergenic 35.0%
! CTCGAAAATAGTTTGAGACT+CGG + chr5_2:25748094-25748113 None:intergenic 35.0%
!!! GTCTCAAACTATTTTCGAGT+TGG - chr5_2:25748095-25748114 Msa0765180:intron 35.0%
GACTCTTAAACAGTATAGCA+GGG + chr5_2:25748137-25748156 None:intergenic 35.0%
TGACTCTTAAACAGTATAGC+AGG + chr5_2:25748138-25748157 None:intergenic 35.0%
GACATTCACAATCGCTTTAT+AGG + chr5_2:25748219-25748238 None:intergenic 35.0%
CTTAATTATCCAAAGTCCCT+AGG + chr5_2:25748454-25748473 None:intergenic 35.0%
TTGCAGTCTCATATAATGTG+GGG + chr5_2:25748643-25748662 None:intergenic 35.0%
CTTGCAGTCTCATATAATGT+GGG + chr5_2:25748644-25748663 None:intergenic 35.0%
! TTCTCAATGTTTTTCATGGC+AGG - chr5_2:25748842-25748861 Msa0765180:intron 35.0%
! GACCCAGAGAATTCAAATTT+TGG - chr5_2:25748881-25748900 Msa0765180:intron 35.0%
TAAGATGGCACAGTCAATTA+AGG - chr5_2:25748926-25748945 Msa0765180:intron 35.0%
! CATGTGACCAAACAGATTTT+TGG - chr5_2:25749010-25749029 Msa0765180:intron 35.0%
AAGCCATTCTGTAACCAATA+GGG + chr5_2:25749271-25749290 None:intergenic 35.0%
TAAGCCATTCTGTAACCAAT+AGG + chr5_2:25749272-25749291 None:intergenic 35.0%
!!! AAGAAGGGTATTTTGGAGTT+AGG - chr5_2:25749699-25749718 Msa0765180:intron 35.0%
ACTGAGAGAAGAGTAAACAA+TGG - chr5_2:25749894-25749913 Msa0765180:intron 35.0%
TTGCAGGAAGTTGCAAATAT+GGG - chr5_2:25750344-25750363 Msa0765180:intron 35.0%
GGTAATAACAGGTTAATGCA+GGG + chr5_2:25750487-25750506 None:intergenic 35.0%
CTGAAACATTCGGTAATAAC+AGG + chr5_2:25750498-25750517 None:intergenic 35.0%
CCGAATGTTTCAGTTATGTA+TGG - chr5_2:25750505-25750524 Msa0765180:intron 35.0%
ACATTTCTTGATCCATCTAG+TGG - chr5_2:25750931-25750950 Msa0765180:intron 35.0%
! GTCTGTCATTTGATAATACG+GGG - chr5_2:25751117-25751136 Msa0765180:intron 35.0%
AATGTCCTGCTTTCATAACT+TGG - chr5_2:25751170-25751189 Msa0765180:intron 35.0%
AAACTCCAAGTTATGAAAGC+AGG + chr5_2:25751178-25751197 None:intergenic 35.0%
GCTAAATCAAACCTCAACAA+CGG + chr5_2:25751341-25751360 None:intergenic 35.0%
! TTACAATATTTTCCCCCATG+TGG - chr5_2:25751374-25751393 Msa0765180:intron 35.0%
TGTTATGCATCTTTCCACAT+GGG + chr5_2:25751391-25751410 None:intergenic 35.0%
ATGTTATGCATCTTTCCACA+TGG + chr5_2:25751392-25751411 None:intergenic 35.0%
GTATAGAAAATAAGGAACCC+TGG + chr5_2:25751446-25751465 None:intergenic 35.0%
!!! TTCCTTATTTTCTATACCCC+AGG - chr5_2:25751449-25751468 Msa0765180:intron 35.0%
!!! TCCTTATTTTCTATACCCCA+GGG - chr5_2:25751450-25751469 Msa0765180:intron 35.0%
!! AACATTTAGGGTCATTTTGG+TGG - chr5_2:25751686-25751705 Msa0765180:intron 35.0%
AGCAAGATATGCTAAATGAC+AGG + chr5_2:25751738-25751757 None:intergenic 35.0%
GCTGCAGCATCATTTATTTA+TGG + chr5_2:25751941-25751960 None:intergenic 35.0%
!! TGATCATGCTTTGATTTTGC+AGG - chr5_2:25752181-25752200 Msa0765180:intron 35.0%
!! GATCATGCTTTGATTTTGCA+GGG - chr5_2:25752182-25752201 Msa0765180:intron 35.0%
! ATGACGACTATGTAGCTTTT+AGG - chr5_2:25752239-25752258 Msa0765180:intron 35.0%
CAAAAGCAATTGGCATAAAC+AGG + chr5_2:25752481-25752500 Msa0765190:five_prime_UTR 35.0%
!! ATGCCAATTGCTTTTGAATG+TGG - chr5_2:25752485-25752504 Msa0765180:intron 35.0%
ATGCCACATTCAAAAGCAAT+TGG + chr5_2:25752491-25752510 Msa0765190:five_prime_UTR 35.0%
!! TTGCTTTTGAATGTGGCATT+TGG - chr5_2:25752492-25752511 Msa0765180:intron 35.0%
GTTGTTGAATAGGATTGTGG+TGG - chr5_2:25740723-25740742 Msa0765180:three_prime_UTR 40.0%
TTGAGCTCAAGTCATAGATG+AGG - chr5_2:25741017-25741036 Msa0765180:three_prime_UTR 40.0%
!! AACAACCCGAGATCGATTTT+TGG - chr5_2:25741063-25741082 Msa0765180:three_prime_UTR 40.0%
TCCATCCAAAAATCGATCTC+GGG + chr5_2:25741071-25741090 None:intergenic 40.0%
!!! TTTTTTGAGAGACCGTGTTG+TGG - chr5_2:25741272-25741291 Msa0765180:intron 40.0%
! AGAGTTCTGATGCAATAGAG+AGG - chr5_2:25742229-25742248 Msa0765180:intron 40.0%
! GAGTTCTGATGCAATAGAGA+GGG - chr5_2:25742230-25742249 Msa0765180:intron 40.0%
! AGTTCTGATGCAATAGAGAG+GGG - chr5_2:25742231-25742250 Msa0765180:intron 40.0%
AACAGAGTTAAATTGAGGGG+AGG - chr5_2:25742567-25742586 Msa0765180:intron 40.0%
!!! CTTTTTTACAGGGGGAAAAC+CGG + chr5_2:25742851-25742870 None:intergenic 40.0%
TCAGGATGTATGTTAATGGG+GGG - chr5_2:25743799-25743818 Msa0765180:intron 40.0%
!! GAGAAAAGGGCTTTGAGTTA+AGG + chr5_2:25744014-25744033 None:intergenic 40.0%
CTGGAACTTGCCTAAATTAC+AGG - chr5_2:25744358-25744377 Msa0765180:CDS 40.0%
GGAACTTGCCTAAATTACAG+GGG - chr5_2:25744360-25744379 Msa0765180:CDS 40.0%
CTTGTAATATAGGCGAGTTC+CGG + chr5_2:25744610-25744629 None:intergenic 40.0%
GGAACTCGCCTATATTACAA+GGG - chr5_2:25744609-25744628 Msa0765180:intron 40.0%
GAACTCGCCTATATTACAAG+GGG - chr5_2:25744610-25744629 Msa0765180:intron 40.0%
ACTATGATAAGCCATAGCCA+TGG + chr5_2:25744866-25744885 None:intergenic 40.0%
ATGGCTATGGCTTATCATAG+TGG - chr5_2:25744865-25744884 Msa0765180:intron 40.0%
! TGGCTTATCATAGTGGAATC+GGG - chr5_2:25744872-25744891 Msa0765180:intron 40.0%
!!! TTTGCCGTTTTTGAAGAGGA+CGG + chr5_2:25745027-25745046 None:intergenic 40.0%
TGATTTGATCGGTGATCTTC+AGG - chr5_2:25745052-25745071 Msa0765180:intron 40.0%
! GTTTTTGCGGTGTGATCATT+CGG - chr5_2:25745450-25745469 Msa0765180:intron 40.0%
!! CCCTTTCTAGTTGCTATAAC+TGG - chr5_2:25745504-25745523 Msa0765180:intron 40.0%
GCCAGTTATAGCAACTAGAA+AGG + chr5_2:25745508-25745527 None:intergenic 40.0%
GATGGAGAGCTTATGGTAAT+AGG - chr5_2:25745671-25745690 Msa0765180:intron 40.0%
TGAACCCCCATTCATTACTA+TGG + chr5_2:25746381-25746400 None:intergenic 40.0%
ATAGTAATGAATGGGGGTTC+AGG - chr5_2:25746380-25746399 Msa0765180:CDS 40.0%
GTTACATGTGGTTGAAGGTA+TGG - chr5_2:25746558-25746577 Msa0765180:intron 40.0%
! TTGAAGGTATGGAACTGCTT+CGG - chr5_2:25746569-25746588 Msa0765180:intron 40.0%
TGATATTGAGAAGGAGAACG+CGG + chr5_2:25746824-25746843 None:intergenic 40.0%
CGTTCTCCTTCTCAATATCA+GGG - chr5_2:25746824-25746843 Msa0765180:intron 40.0%
TGAGTGAACTTAGTTCAACC+GGG - chr5_2:25747270-25747289 Msa0765180:intron 40.0%
CGACTCGATAAGAATCAAGT+TGG - chr5_2:25747295-25747314 Msa0765180:intron 40.0%
!!! TGTCAATTACCATCGGCTTT+TGG - chr5_2:25747806-25747825 Msa0765180:intron 40.0%
CAACTCAAGTTCGACTCATT+TGG - chr5_2:25748034-25748053 Msa0765180:intron 40.0%
GGTAGTTAATTCGTCGAACA+TGG + chr5_2:25748068-25748087 None:intergenic 40.0%
AATCGCTTTATAGGCCTTGA+TGG + chr5_2:25748210-25748229 None:intergenic 40.0%
AAAGCGATTGTGAATGTCAG+AGG - chr5_2:25748221-25748240 Msa0765180:intron 40.0%
AAGCGATTGTGAATGTCAGA+GGG - chr5_2:25748222-25748241 Msa0765180:intron 40.0%
GCCAACTTCATGAAAACCTA+TGG - chr5_2:25748286-25748305 Msa0765180:intron 40.0%
! GCCATAGGTTTTCATGAAGT+TGG + chr5_2:25748290-25748309 None:intergenic 40.0%
! TTCTGGTCATTGATTGCCAT+AGG + chr5_2:25748305-25748324 None:intergenic 40.0%
TATGGCAATCAATGACCAGA+AGG - chr5_2:25748304-25748323 Msa0765180:intron 40.0%
GTTTAGAGATTACTGCGTAC+TGG + chr5_2:25748347-25748366 None:intergenic 40.0%
TCTTGGAATAGTTGAGGTCA+TGG + chr5_2:25748369-25748388 None:intergenic 40.0%
! GGAGGCTTATTATAGTTTGC+CGG + chr5_2:25748508-25748527 None:intergenic 40.0%
AAAAACTGTTGCAGTTTGGC+AGG + chr5_2:25748529-25748548 None:intergenic 40.0%
TCTTAAAACGGGTACACATG+AGG - chr5_2:25748574-25748593 Msa0765180:intron 40.0%
AATTTCCCTTAATCCTCCAC+CGG - chr5_2:25748603-25748622 Msa0765180:intron 40.0%
GCTTGCAGTCTCATATAATG+TGG + chr5_2:25748645-25748664 None:intergenic 40.0%
TGTCCTTAATATGAGGGATG+TGG - chr5_2:25748672-25748691 Msa0765180:intron 40.0%
CTTTATATAGGTGCAAGTGC+AGG + chr5_2:25748987-25749006 None:intergenic 40.0%
! GAACCCTATTGGTTACAGAA+TGG - chr5_2:25749265-25749284 Msa0765180:intron 40.0%
TGTTGGGCTCTCTGATTATA+AGG - chr5_2:25749348-25749367 Msa0765180:intron 40.0%
TCAATTCCATTATCCAGGAC+TGG + chr5_2:25749445-25749464 None:intergenic 40.0%
TACGTTGTTTATACCCTCTC+AGG - chr5_2:25750129-25750148 Msa0765180:intron 40.0%
TTGTTTATACCCTCTCAGGA+TGG - chr5_2:25750133-25750152 Msa0765180:intron 40.0%
GAATTCAGTGCTTGAGAATC+AGG - chr5_2:25750162-25750181 Msa0765180:intron 40.0%
TTCAATGCCTGGGAAGAAAA+TGG - chr5_2:25750278-25750297 Msa0765180:intron 40.0%
TCAATGCCTGGGAAGAAAAT+GGG - chr5_2:25750279-25750298 Msa0765180:intron 40.0%
TGATTTAACTGTGTGGTTGC+AGG - chr5_2:25750328-25750347 Msa0765180:intron 40.0%
GTTGCAGGAAGTTGCAAATA+TGG - chr5_2:25750343-25750362 Msa0765180:intron 40.0%
GGAAGTTGCAAATATGGGAT+TGG - chr5_2:25750349-25750368 Msa0765180:intron 40.0%
CGGTAATAACAGGTTAATGC+AGG + chr5_2:25750488-25750507 None:intergenic 40.0%
!! ATCGATAGTGGAAACCAAAC+AGG - chr5_2:25750866-25750885 Msa0765180:intron 40.0%
TCTAGATACAAGGTCCTGTT+TGG + chr5_2:25750883-25750902 None:intergenic 40.0%
!! TTTTCAGGGAACTATGCCAA+AGG - chr5_2:25750980-25750999 Msa0765180:intron 40.0%
!!! GGAAGTTTTGGTTGTTCCTT+TGG + chr5_2:25750999-25751018 None:intergenic 40.0%
AAGGAACAACCAAAACTTCC+AGG - chr5_2:25750999-25751018 Msa0765180:intron 40.0%
AGGAACAACCAAAACTTCCA+GGG - chr5_2:25751000-25751019 Msa0765180:intron 40.0%
ACTAGTATGCTCACATATCC+AGG - chr5_2:25751029-25751048 Msa0765180:intron 40.0%
TAGAAGAACACCTGAAATCC+TGG + chr5_2:25751050-25751069 None:intergenic 40.0%
AAGCAGGACATTAAAGCATG+TGG + chr5_2:25751162-25751181 None:intergenic 40.0%
AGTCATTGTCCAGTTTAGAC+AGG - chr5_2:25751258-25751277 Msa0765180:intron 40.0%
AGCTTCAGATACTATTGTGC+CGG - chr5_2:25751283-25751302 Msa0765180:intron 40.0%
TCTAGATTATCCAAACCACC+CGG + chr5_2:25751305-25751324 None:intergenic 40.0%
ATAATCTAGAGAAGCAGCGA+AGG - chr5_2:25751315-25751334 Msa0765180:intron 40.0%
TTATGCATCTTTCCACATGG+GGG + chr5_2:25751389-25751408 None:intergenic 40.0%
GTTATGCATCTTTCCACATG+GGG + chr5_2:25751390-25751409 None:intergenic 40.0%
TCCCTGGGGTATAGAAAATA+AGG + chr5_2:25751454-25751473 None:intergenic 40.0%
! TTATTTTCTATACCCCAGGG+AGG - chr5_2:25751453-25751472 Msa0765180:intron 40.0%
! TATTTTCTATACCCCAGGGA+GGG - chr5_2:25751454-25751473 Msa0765180:intron 40.0%
AGGATGAAAGCTCTTTGTGA+AGG - chr5_2:25751594-25751613 Msa0765180:intron 40.0%
GGATGAAAGCTCTTTGTGAA+GGG - chr5_2:25751595-25751614 Msa0765180:intron 40.0%
TGAAAACTCTGATTGACCTC+AGG - chr5_2:25752038-25752057 Msa0765180:intron 40.0%
TGAGTTAACACAAGTTCCTG+AGG + chr5_2:25752057-25752076 None:intergenic 40.0%
CACAACAGAAAGTCATTAGC+AGG + chr5_2:25752323-25752342 None:intergenic 40.0%
!! ACCCGAGATCGATTTTTGGA+TGG - chr5_2:25741067-25741086 Msa0765180:exon 45.0%
! AGAGTGTTAAGAGAGAAGGG+AGG + chr5_2:25742025-25742044 None:intergenic 45.0%
CAAAGACCTCCCTTAAGGTT+TGG + chr5_2:25742636-25742655 None:intergenic 45.0%
GAACTCGCCTATATTACAGG+GGG + chr5_2:25742829-25742848 None:intergenic 45.0%
GGAACTCGCCTATATTACAG+GGG + chr5_2:25742830-25742849 None:intergenic 45.0%
CGGAACTCGCCTATATTACA+GGG + chr5_2:25744608-25744627 None:intergenic 45.0%
CCTGTAATATAGGCGAGTTC+CGG - chr5_2:25742829-25742848 Msa0765180:intron 45.0%
AAAACCCCCTGGTCGAATAT+TGG - chr5_2:25742911-25742930 Msa0765180:CDS 45.0%
! GTCATCATTTTCTGCTGACG+TGG + chr5_2:25744466-25744485 None:intergenic 45.0%
AAAACCCCCTGGTCGAATAT+TGG + chr5_2:25742911-25742930 None:intergenic 45.0%
CGGAACTCGCCTATATTACA+AGG - chr5_2:25744608-25744627 Msa0765180:intron 45.0%
CTATAATCTCAGCCGTTGGT+TGG + chr5_2:25744707-25744726 None:intergenic 45.0%
CAACCAACGGCTGAGATTAT+AGG - chr5_2:25744705-25744724 Msa0765180:intron 45.0%
CAACCTATAATCTCAGCCGT+TGG + chr5_2:25744711-25744730 None:intergenic 45.0%
TAGCCAAAACAAAGTCCTCG+TGG - chr5_2:25744756-25744775 Msa0765180:intron 45.0%
AAGAAAGCAATACTGCCACG+AGG + chr5_2:25744774-25744793 None:intergenic 45.0%
TATATGCTTGCAGGGAAGGA+AGG + chr5_2:25744801-25744820 None:intergenic 45.0%
TAGCTATATGCTTGCAGGGA+AGG + chr5_2:25744805-25744824 None:intergenic 45.0%
TGCGTAGCTATATGCTTGCA+GGG + chr5_2:25744809-25744828 None:intergenic 45.0%
TTGCGTAGCTATATGCTTGC+AGG + chr5_2:25744810-25744829 None:intergenic 45.0%
!! GAAGAAGGAAGTACCCGTTA+CGG + chr5_2:25744920-25744939 None:intergenic 45.0%
GAGAGAGAGGAAGAAGAAGA+AGG + chr5_2:25744935-25744954 None:intergenic 45.0%
!! TCACTTTTCCGCTCCTTTTC+AGG - chr5_2:25744990-25745009 Msa0765180:intron 45.0%
TCTTGAGTTCGATTCATGGG+TGG + chr5_2:25745326-25745345 None:intergenic 45.0%
TCCAAATTTGTGGGAGCCAA+AGG + chr5_2:25745399-25745418 None:intergenic 45.0%
TTACCATAAGCTCTCCATCC+AGG + chr5_2:25745670-25745689 None:intergenic 45.0%
TGCTCATAGGCACTAGTGAA+AGG - chr5_2:25746132-25746151 Msa0765180:intron 45.0%
GCTCATAGGCACTAGTGAAA+GGG - chr5_2:25746133-25746152 Msa0765180:intron 45.0%
ATAGGCACTAGTGAAAGGGT+TGG - chr5_2:25746137-25746156 Msa0765180:intron 45.0%
GTGAAAGGGTTGGAAAAGTC+CGG - chr5_2:25746147-25746166 Msa0765180:intron 45.0%
TGAAAGGGTTGGAAAAGTCC+GGG - chr5_2:25746148-25746167 Msa0765180:intron 45.0%
! GTTTGTTACCTGAGCAGCAA+TGG + chr5_2:25746211-25746230 None:intergenic 45.0%
TTGCTGCTCAGGTAACAAAC+TGG - chr5_2:25746211-25746230 Msa0765180:intron 45.0%
TTTGCCTTAGATTCGGCGTT+TGG - chr5_2:25746319-25746338 Msa0765180:intron 45.0%
TTAGCCAAACGCCGAATCTA+AGG + chr5_2:25746326-25746345 None:intergenic 45.0%
! CTGTGGGTTATGGTTACATG+TGG - chr5_2:25746546-25746565 Msa0765180:intron 45.0%
GCGTTCTCCTTCTCAATATC+AGG - chr5_2:25746823-25746842 Msa0765180:intron 45.0%
GAAACGCCCTGATATTGAGA+AGG + chr5_2:25746833-25746852 None:intergenic 45.0%
GTACGTGACTAAACGCAACA+TGG - chr5_2:25746868-25746887 Msa0765180:intron 45.0%
AAAAAAGCTGCAGCATGCCT+CGG - chr5_2:25746913-25746932 Msa0765180:CDS 45.0%
ACTTACAGCAATGACATCCG+AGG + chr5_2:25746933-25746952 None:intergenic 45.0%
CATCAGCTCTTCCATTCGAA+GGG - chr5_2:25747050-25747069 Msa0765180:intron 45.0%
AGGATTCCATACCCTTCGAA+TGG + chr5_2:25747064-25747083 None:intergenic 45.0%
AGCATACTATACTGTAGGGC+TGG - chr5_2:25747244-25747263 Msa0765180:intron 45.0%
! ATGAGAGTCTGTAGAGTGTC+TGG - chr5_2:25747743-25747762 Msa0765180:intron 45.0%
! TGAGAGTCTGTAGAGTGTCT+GGG - chr5_2:25747744-25747763 Msa0765180:intron 45.0%
CTTAAACAGTATAGCAGGGC+TGG + chr5_2:25748133-25748152 None:intergenic 45.0%
AGCGATTGTGAATGTCAGAG+GGG - chr5_2:25748223-25748242 Msa0765180:intron 45.0%
!! TACTGGTGTCATTGATTGCC+CGG + chr5_2:25748330-25748349 None:intergenic 45.0%
AGATAGGCCCCTATATGTCT+TGG + chr5_2:25748386-25748405 None:intergenic 45.0%
! GGGCCTATCTCTTTTAACAC+TGG - chr5_2:25748396-25748415 Msa0765180:CDS 45.0%
CTTACATACCCTAGGGACTT+TGG - chr5_2:25748442-25748461 Msa0765180:CDS 45.0%
TGGGGTTTACCTTACTCTAC+CGG + chr5_2:25748625-25748644 None:intergenic 45.0%
CTGCCACATCCCTCATATTA+AGG + chr5_2:25748678-25748697 None:intergenic 45.0%
TTTACCCACATTTGCCCCAT+TGG - chr5_2:25748699-25748718 Msa0765180:intron 45.0%
AGAAAAACAGTGGGCCAATG+GGG + chr5_2:25748716-25748735 None:intergenic 45.0%
CAGAAAAACAGTGGGCCAAT+GGG + chr5_2:25748717-25748736 None:intergenic 45.0%
TAGCAAGTGCTCGTCCTTAT+AGG + chr5_2:25749112-25749131 None:intergenic 45.0%
CTGTGACTGTTGAACCCTAT+TGG - chr5_2:25749254-25749273 Msa0765180:intron 45.0%
ATGGGACGAAAGTAAAGCTG+TGG - chr5_2:25749508-25749527 Msa0765180:intron 45.0%
TTAAACTCTGCAGTTGTGCG+TGG - chr5_2:25749746-25749765 Msa0765180:intron 45.0%
TTATACCCTCTCAGGATGGA+AGG - chr5_2:25750137-25750156 Msa0765180:intron 45.0%
TTCAACCTTCCATCCTGAGA+GGG + chr5_2:25750145-25750164 None:intergenic 45.0%
ATTCAACCTTCCATCCTGAG+AGG + chr5_2:25750146-25750165 None:intergenic 45.0%
! TGATTGCCCATTTTCTTCCC+AGG + chr5_2:25750288-25750307 None:intergenic 45.0%
! GCTTTATTACGGCAAATGCC+CGG - chr5_2:25750384-25750403 Msa0765180:intron 45.0%
ATACCCACCTGTAAAGAGTC+CGG + chr5_2:25750416-25750435 None:intergenic 45.0%
AACAACCAAAACTTCCAGGG+AGG - chr5_2:25751003-25751022 Msa0765180:intron 45.0%
GCTCACATATCCAGGATTTC+AGG - chr5_2:25751037-25751056 Msa0765180:intron 45.0%
CAGGACATTAAAGCATGTGG+AGG + chr5_2:25751159-25751178 None:intergenic 45.0%
ATGATTCCGCTTTCACTTGC+AGG - chr5_2:25751217-25751236 Msa0765180:intron 45.0%
TGATTCCGCTTTCACTTGCA+GGG - chr5_2:25751218-25751237 Msa0765180:intron 45.0%
TAAGACCCTGCAAGTGAAAG+CGG + chr5_2:25751226-25751245 None:intergenic 45.0%
TGAAGCTGACCTGTCTAAAC+TGG + chr5_2:25751270-25751289 None:intergenic 45.0%
GCTTCAGATACTATTGTGCC+GGG - chr5_2:25751284-25751303 Msa0765180:intron 45.0%
TGGCACCTGTCTAAATTCCA+GGG - chr5_2:25751426-25751445 Msa0765180:intron 45.0%
AGGAACCCTGGAATTTAGAC+AGG + chr5_2:25751434-25751453 None:intergenic 45.0%
! TAGCATCTGTGGACTGCTAA+AGG - chr5_2:25751903-25751922 Msa0765180:intron 45.0%
ATAAATGATGCTGCAGCGGA+AGG - chr5_2:25751944-25751963 Msa0765180:intron 45.0%
ACGGAAAGAATACTACGCAG+AGG + chr5_2:25751978-25751997 None:intergenic 45.0%
!! CTACTTCGACCAAGTGTTGA+TGG - chr5_2:25752205-25752224 Msa0765180:intron 45.0%
!!! TTATTTTTAAAATTTTTACA+GGG + chr5_2:25744329-25744348 None:intergenic 5.0%
!!! TTTATTTTTAAAATTTTTAC+AGG + chr5_2:25744328-25744347 None:intergenic 5.0%
!! TAAAAATAAAAAATAAAATC+TGG - chr5_2:25743091-25743110 Msa0765180:intron 5.0%
!!! TTTTAAAAATAACAAAAAAT+CGG - chr5_2:25743307-25743326 Msa0765180:intron 5.0%
!!! TATTTAAAATTTTAAAAATC+TGG - chr5_2:25743580-25743599 Msa0765180:intron 5.0%
!! AAAAAAATAAAAAAATTGTT+CGG + chr5_2:25744230-25744249 None:intergenic 5.0%
!!! TATTTTTAAAAAAAAAATAC+TGG + chr5_2:25744277-25744296 None:intergenic 5.0%
!! TAAAAATAAAAAATAAAATC+TGG + chr5_2:25743091-25743110 None:intergenic 5.0%
!!! TTTATTTTTAAAATTTTTAC+AGG - chr5_2:25744328-25744347 Msa0765180:intron 5.0%
!!! TTATTTTTAAAATTTTTACA+GGG - chr5_2:25744329-25744348 Msa0765180:intron 5.0%
!! TTAATAAATATAAAAAAACA+AGG + chr5_2:25745156-25745175 None:intergenic 5.0%
CCGGAACTCGCCTATATTAC+AGG + chr5_2:25744607-25744626 None:intergenic 50.0%
TGTTAATGGGGGGTTGCCTT+AGG - chr5_2:25743809-25743828 Msa0765180:intron 50.0%
AGATTCCATCGAAAACCCCC+TGG + chr5_2:25744539-25744558 None:intergenic 50.0%
!! CTGCCACGAGGACTTTGTTT+TGG + chr5_2:25744762-25744781 None:intergenic 50.0%
AGAGAGAGAGACCTGTGTGA+AGG + chr5_2:25744835-25744854 None:intergenic 50.0%
TCTCTCTCTCTCTAACGCCA+TGG - chr5_2:25744846-25744865 Msa0765180:intron 50.0%
TCTCTCTAACGCCATGGCTA+TGG - chr5_2:25744852-25744871 Msa0765180:intron 50.0%
TAGTGGAATCGGGATCTCCA+AGG - chr5_2:25744882-25744901 Msa0765180:intron 50.0%
TACGGCGATGAATAGGACCT+TGG + chr5_2:25744902-25744921 None:intergenic 50.0%
GGTCCTATTCATCGCCGTAA+CGG - chr5_2:25744903-25744922 Msa0765180:intron 50.0%
GTCCTATTCATCGCCGTAAC+GGG - chr5_2:25744904-25744923 Msa0765180:intron 50.0%
TACCCGTTACGGCGATGAAT+AGG + chr5_2:25744909-25744928 None:intergenic 50.0%
CGATTGTGTGTGTGAGAGAG+AGG + chr5_2:25744948-25744967 None:intergenic 50.0%
CGGTGTAACCTGAAAAGGAG+CGG + chr5_2:25745001-25745020 None:intergenic 50.0%
!!! CGCTCCTTTTCAGGTTACAC+CGG - chr5_2:25744999-25745018 Msa0765180:intron 50.0%
!! GTTTTTGAAGAGGACGGTGC+CGG + chr5_2:25745021-25745040 None:intergenic 50.0%
GGCACCGTCCTCTTCAAAAA+CGG - chr5_2:25745020-25745039 Msa0765180:intron 50.0%
GGGTGGAACTCTAGATTACC+AGG + chr5_2:25745309-25745328 None:intergenic 50.0%
! GCCTTTGGCTCCCACAAATT+TGG - chr5_2:25745395-25745414 Msa0765180:intron 50.0%
GATGCTTTCGTAAGCCATCC+TGG - chr5_2:25745649-25745668 Msa0765180:intron 50.0%
CTTTCGTAAGCCATCCTGGA+TGG - chr5_2:25745653-25745672 Msa0765180:intron 50.0%
CATAAGCTCTCCATCCAGGA+TGG + chr5_2:25745666-25745685 None:intergenic 50.0%
CATCCTGGATGGAGAGCTTA+TGG - chr5_2:25745664-25745683 Msa0765180:intron 50.0%
GAAAGGGTTGGAAAAGTCCG+GGG - chr5_2:25746149-25746168 Msa0765180:intron 50.0%
TACCTGAGCAGCAATGGCAT+CGG + chr5_2:25746205-25746224 None:intergenic 50.0%
CCTTCGAATGGAAGAGCTGA+TGG + chr5_2:25747052-25747071 None:intergenic 50.0%
CCATCAGCTCTTCCATTCGA+AGG - chr5_2:25747049-25747068 Msa0765180:intron 50.0%
GCTCTTCCATTCGAAGGGTA+TGG - chr5_2:25747055-25747074 Msa0765180:intron 50.0%
GATTCTTATCGAGTCGAGCC+CGG + chr5_2:25747291-25747310 None:intergenic 50.0%
AATCGAGTCGAGTTCGAGCT+AGG + chr5_2:25747357-25747376 None:intergenic 50.0%
TCGAGTCGAACTGAGTTGCT+CGG + chr5_2:25747387-25747406 None:intergenic 50.0%
GCAATCAATGACCAGAAGGC+CGG - chr5_2:25748308-25748327 Msa0765180:intron 50.0%
CAATCAATGACCAGAAGGCC+GGG - chr5_2:25748309-25748328 Msa0765180:intron 50.0%
AACTGTTGCAGTTTGGCAGG+AGG + chr5_2:25748526-25748545 None:intergenic 50.0%
CTCTACCGGTGGAGGATTAA+GGG + chr5_2:25748611-25748630 None:intergenic 50.0%
ACTCTACCGGTGGAGGATTA+AGG + chr5_2:25748612-25748631 None:intergenic 50.0%
AATCCTCCACCGGTAGAGTA+AGG - chr5_2:25748613-25748632 Msa0765180:intron 50.0%
TTACCTTACTCTACCGGTGG+AGG + chr5_2:25748619-25748638 None:intergenic 50.0%
GGTTTACCTTACTCTACCGG+TGG + chr5_2:25748622-25748641 None:intergenic 50.0%
CCAGAAAAACAGTGGGCCAA+TGG + chr5_2:25748718-25748737 None:intergenic 50.0%
!! CCATTGGCCCACTGTTTTTC+TGG - chr5_2:25748715-25748734 Msa0765180:intron 50.0%
CTATGTTCCACTTCCAGTCC+TGG - chr5_2:25749429-25749448 Msa0765180:intron 50.0%
CCATTATCCAGGACTGGAAG+TGG + chr5_2:25749439-25749458 None:intergenic 50.0%
CCACTTCCAGTCCTGGATAA+TGG - chr5_2:25749436-25749455 Msa0765180:intron 50.0%
GCAACACACAGTGGCAATGT+TGG - chr5_2:25749609-25749628 Msa0765180:intron 50.0%
AGTTGTGCGTGGAGGATATC+CGG - chr5_2:25749757-25749776 Msa0765180:intron 50.0%
! GTAGACCTCCCTGGAAGTTT+TGG + chr5_2:25751011-25751030 None:intergenic 50.0%
AGCATACTAGTAGACCTCCC+TGG + chr5_2:25751020-25751039 None:intergenic 50.0%
TCAGATACTATTGTGCCGGG+TGG - chr5_2:25751287-25751306 Msa0765180:intron 50.0%
TACTATTGTGCCGGGTGGTT+TGG - chr5_2:25751292-25751311 Msa0765180:intron 50.0%
GTGGCACCTGTCTAAATTCC+AGG - chr5_2:25751425-25751444 Msa0765180:intron 50.0%
ATCACTCTTCAACCCTCCCT+GGG + chr5_2:25751469-25751488 None:intergenic 50.0%
AATCACTCTTCAACCCTCCC+TGG + chr5_2:25751470-25751489 None:intergenic 50.0%
CAAGGCAGTGATAGCATCTG+TGG - chr5_2:25751892-25751911 Msa0765180:intron 50.0%
!! TCGACCAAGTGTTGATGGCA+AGG - chr5_2:25752210-25752229 Msa0765180:intron 50.0%
GAGACCTTGCCATCAACACT+TGG + chr5_2:25752217-25752236 None:intergenic 50.0%
AGATTCCGTCGAAAACCCCC+TGG - chr5_2:25742900-25742919 Msa0765180:CDS 55.0%
! TTCGACCAGGGGGTTTTCGA+CGG + chr5_2:25744531-25744550 None:intergenic 55.0%
GGGTCCAATATTCGACCAGG+GGG + chr5_2:25744521-25744540 None:intergenic 55.0%
GGGGTCCAATATTCGACCAG+GGG + chr5_2:25744520-25744539 None:intergenic 55.0%
GGGGGTCCAATATTCGACCA+GGG + chr5_2:25744519-25744538 None:intergenic 55.0%
CACGCCACGTCAGCAGAAAA+GGG + chr5_2:25742980-25742999 None:intergenic 55.0%
GGGGGTCCAATATTCGACCA+GGG - chr5_2:25744519-25744538 Msa0765180:intron 55.0%
GGGGTCCAATATTCGACCAG+GGG - chr5_2:25744520-25744539 Msa0765180:intron 55.0%
GGGTCCAATATTCGACCAGG+GGG - chr5_2:25744521-25744540 Msa0765180:intron 55.0%
! TTCGACCAGGGGGTTTTCGA+TGG - chr5_2:25744531-25744550 Msa0765180:intron 55.0%
GCTACGCAAAGCCTTCACAC+AGG - chr5_2:25744821-25744840 Msa0765180:intron 55.0%
!! GGTGCCGGTGTAACCTGAAA+AGG + chr5_2:25745006-25745025 None:intergenic 55.0%
!! TTTCTGGGGGGAAGTGTTCC+TGG - chr5_2:25745288-25745307 Msa0765180:intron 55.0%
GTTGGAAAAGTCCGGGGATC+AGG - chr5_2:25746155-25746174 Msa0765180:intron 55.0%
TTCACCTTCAGCCTGATCCC+CGG + chr5_2:25746169-25746188 None:intergenic 55.0%
ATAACCCACAGCACCCAAGG+TGG + chr5_2:25746537-25746556 None:intergenic 55.0%
! ACCTTGGGTGCTGTGGGTTA+TGG - chr5_2:25746536-25746555 Msa0765180:intron 55.0%
ACCATAACCCACAGCACCCA+AGG + chr5_2:25746540-25746559 None:intergenic 55.0%
CGAGTCGAACTGAGTTGCTC+GGG + chr5_2:25747386-25747405 None:intergenic 55.0%
! TCATTGATTGCCCGGCCTTC+TGG + chr5_2:25748322-25748341 None:intergenic 55.0%
TGGGCCAATGGGGCAAATGT+GGG + chr5_2:25748706-25748725 None:intergenic 55.0%
AACTCTGCAGTTGTGCGTGG+AGG - chr5_2:25749749-25749768 Msa0765180:intron 55.0%
TAAAGAGTCCGGCACTCTCC+GGG + chr5_2:25750405-25750424 None:intergenic 55.0%
GTAAAGAGTCCGGCACTCTC+CGG + chr5_2:25750406-25750425 None:intergenic 55.0%
!! GAGAGTGCCGGACTCTTTAC+AGG - chr5_2:25750406-25750425 Msa0765180:intron 55.0%
! AGTGCCGGACTCTTTACAGG+TGG - chr5_2:25750409-25750428 Msa0765180:intron 55.0%
GTGCCGGACTCTTTACAGGT+GGG - chr5_2:25750410-25750429 Msa0765180:intron 55.0%
TCACTCTTCAACCCTCCCTG+GGG + chr5_2:25751468-25751487 None:intergenic 55.0%
GGGGGGTCCAATATTCGACC+AGG + chr5_2:25744518-25744537 None:intergenic 60.0%
TCACGCCACGTCATCAGCTG+GGG + chr5_2:25744499-25744518 None:intergenic 60.0%
GTCACGCCACGTCATCAGCT+GGG + chr5_2:25744498-25744517 None:intergenic 60.0%
! GTCGCCCTTTTCTGCTGACG+TGG - chr5_2:25742973-25742992 Msa0765180:intron 60.0%
GCACGCCACGTCAGCAGAAA+AGG + chr5_2:25742981-25743000 None:intergenic 60.0%
GTCACGCCACGTCATCAGCT+GGG - chr5_2:25744498-25744517 Msa0765180:intron 60.0%
TCACGCCACGTCATCAGCTG+GGG - chr5_2:25744499-25744518 Msa0765180:intron 60.0%
GGGGGGTCCAATATTCGACC+AGG - chr5_2:25744518-25744537 Msa0765180:intron 60.0%
AAGTCCGGGGATCAGGCTGA+AGG - chr5_2:25746162-25746181 Msa0765180:intron 60.0%
GGGGATCAGGCTGAAGGTGA+AGG - chr5_2:25746168-25746187 Msa0765180:intron 60.0%
! CTGAGCAGCAATGGCATCGG+CGG + chr5_2:25746202-25746221 None:intergenic 60.0%
TGTGGTTCCAGCTGCCACCT+TGG - chr5_2:25746520-25746539 Msa0765180:intron 60.0%
GTGGTTCCAGCTGCCACCTT+GGG - chr5_2:25746521-25746540 Msa0765180:intron 60.0%
GTGGGCCAATGGGGCAAATG+TGG + chr5_2:25748707-25748726 None:intergenic 60.0%
! GAGCGTCGTGCAACACACAG+TGG - chr5_2:25749600-25749619 Msa0765180:intron 60.0%
AGCAGCGAAGGCCGTTGTTG+AGG - chr5_2:25751327-25751346 Msa0765180:intron 60.0%
ACGCCACGTCATCAGCTGGG+GGG + chr5_2:25744501-25744520 None:intergenic 65.0%
CACGCCACGTCATCAGCTGG+GGG + chr5_2:25744500-25744519 None:intergenic 65.0%
CGTCACGCCACGTCATCAGC+TGG + chr5_2:25744497-25744516 None:intergenic 65.0%
! GCTGATGACGTGGCGTGACG+TGG - chr5_2:25742942-25742961 Msa0765180:intron 65.0%
! GCTGATGACGTGGCGTGACG+TGG + chr5_2:25742942-25742961 None:intergenic 65.0%
CGTCACGCCACGTCATCAGC+TGG - chr5_2:25744497-25744516 Msa0765180:intron 65.0%
CACGCCACGTCATCAGCTGG+GGG - chr5_2:25744500-25744519 Msa0765180:intron 65.0%
ACGCCACGTCATCAGCTGGG+GGG - chr5_2:25744501-25744520 Msa0765180:intron 65.0%
CGCCGATGCCATTGCTGCTC+AGG - chr5_2:25746200-25746219 Msa0765180:intron 65.0%
ACAGCACCCAAGGTGGCAGC+TGG + chr5_2:25746530-25746549 None:intergenic 65.0%
! AGCTGCCACCTTGGGTGCTG+TGG - chr5_2:25746529-25746548 Msa0765180:intron 65.0%
! GCTGCCACCTTGGGTGCTGT+GGG - chr5_2:25746530-25746549 Msa0765180:intron 65.0%
! GGCAAATGCCCGGAGAGTGC+CGG - chr5_2:25750394-25750413 Msa0765180:intron 65.0%
! GGACCCCCCAGCTGATGACG+TGG - chr5_2:25742932-25742951 Msa0765180:CDS 70.0%
! GGACCCCCCAGCTGATGACG+TGG + chr5_2:25742932-25742951 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 25740712 25752597 25740712 ID=Msa0765180;Name=Msa0765180
chr5_2 mRNA 25740712 25752597 25740712 ID=Msa0765180-mRNA-1;Parent=Msa0765180;Name=Msa0765180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.92|0.85|0.92|0.84|0.92|14|373|354
chr5_2 exon 25740712 25741106 25740712 ID=Msa0765180-mRNA-1:exon:10368;Parent=Msa0765180-mRNA-1
chr5_2 exon 25741961 25742070 25741961 ID=Msa0765180-mRNA-1:exon:10367;Parent=Msa0765180-mRNA-1
chr5_2 exon 25742251 25742322 25742251 ID=Msa0765180-mRNA-1:exon:10366;Parent=Msa0765180-mRNA-1
chr5_2 exon 25742882 25742959 25742882 ID=Msa0765180-mRNA-1:exon:10365;Parent=Msa0765180-mRNA-1
chr5_2 exon 25743126 25743158 25743126 ID=Msa0765180-mRNA-1:exon:10364;Parent=Msa0765180-mRNA-1
chr5_2 exon 25743679 25743753 25743679 ID=Msa0765180-mRNA-1:exon:10363;Parent=Msa0765180-mRNA-1
chr5_2 exon 25744356 25744445 25744356 ID=Msa0765180-mRNA-1:exon:10362;Parent=Msa0765180-mRNA-1
chr5_2 exon 25746363 25746464 25746363 ID=Msa0765180-mRNA-1:exon:10361;Parent=Msa0765180-mRNA-1
chr5_2 exon 25746735 25746805 25746735 ID=Msa0765180-mRNA-1:exon:10360;Parent=Msa0765180-mRNA-1
chr5_2 exon 25746899 25746980 25746899 ID=Msa0765180-mRNA-1:exon:10359;Parent=Msa0765180-mRNA-1
chr5_2 exon 25747088 25747168 25747088 ID=Msa0765180-mRNA-1:exon:10358;Parent=Msa0765180-mRNA-1
chr5_2 exon 25748236 25748297 25748236 ID=Msa0765180-mRNA-1:exon:10357;Parent=Msa0765180-mRNA-1
chr5_2 exon 25748384 25748566 25748384 ID=Msa0765180-mRNA-1:exon:10356;Parent=Msa0765180-mRNA-1
chr5_2 exon 25752594 25752597 25752594 ID=Msa0765180-mRNA-1:exon:10355;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25752594 25752597 25752594 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25748384 25748566 25748384 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25748236 25748297 25748236 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25747088 25747168 25747088 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25746899 25746980 25746899 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25746735 25746805 25746735 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25746363 25746464 25746363 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25744356 25744445 25744356 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25743679 25743753 25743679 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25743126 25743158 25743126 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25742882 25742959 25742882 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25742251 25742322 25742251 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25741961 25742070 25741961 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 CDS 25741085 25741106 25741085 ID=Msa0765180-mRNA-1:cds;Parent=Msa0765180-mRNA-1
chr5_2 three_prime_UTR 25740712 25741084 25740712 ID=Msa0765180-mRNA-1:three_prime_utr;Parent=Msa0765180-mRNA-1
Gene Sequence

>Msa0765180

ATGGTAAGAAAGAAGTTTAGCCAAAACAAAGTCCTCGTGGCAGTATTGCTTTCTTCATTCCTTCCTTCCCTGCAAGCATATAGCTACGCAAAGCCTTCACACAGGTCTCTCTCTCTCTCTAACGCCATGGCTATGGCTTATCATAGTGGAATCGGGATCTCCAAGGTCCTATTCATCGCCGTAACGGGTTACACCGGCACCGTCCTCTTCAAAAACGGCAAATTATCTGATTTGATCGGTGATCTTCAGGCACTAGTGAAAGGGTTGGAAAAGTCCGGGGATCAGGCTGAAGGTGAAGGAGAGCATGCCGCCGATGCCATTGCTGCTCAGATTCGGCGTTTGGCTAATGAAGTGAAGCATTTAACATCAAACAGACAAACCATAGTAATGAATGGGGGTTCAGGACAAAGTAGTAATTTGTCATCTCTTGTGGTTCCAGCTGCCACCTTGGGTGCTGTGGGTTATGGTTACATGTGGTTGAAGGGCGTTTCATTCTCAGATCTTATGTACGTGACTAAACGCAACATGGAAAATGCTGTTGCAGATTTGACAAAAAAGCTGCAGCATGCCTCGGATGTCATTGCTGATGCTAAGAAGCACTTGACCCAGAGAATTCAAATTTTGGATGACAAAATGCGCAAACAATATAAGATGGCACAGTCAATTAAGGATGATGTTAATAAAGTTCAAGACACTGTTACTACTATACATGATGACTTGAGCGTCGTGCAACACACAGTGGCAATGTTGGATGGAAGGTTGAATTCAGTGCTTGAGAATCAGGAAGTTGCAAATATGGGATTGGACTATATTATTGGCTTTATTACGGCAAATGCCCGGAGAGTGCCGGACTCTTTACAGGGAACTATGCCAAAGGAACAACCAAAACTTCCAGGGAGGTCTACTAGTATGCTCACATATCCAGGATTTCAGGGTCTTAAAGACATTGCAGAGTCATTGTCCAGTTTAGACAGGTCAGCTTCAGATACTATTGTGCCGGGTGGTTTGGATAATCTAGAGAAGCAGCGAAGGCCGTTGTTGAGGGCTACTTCGACCAAGTGTTGA

Protein sequence

>Msa0765180

MVRKKFSQNKVLVAVLLSSFLPSLQAYSYAKPSHRSLSLSNAMAMAYHSGIGISKVLFIAVTGYTGTVLFKNGKLSDLIGDLQALVKGLEKSGDQAEGEGEHAADAIAAQIRRLANEVKHLTSNRQTIVMNGGSGQSSNLSSLVVPAATLGAVGYGYMWLKGVSFSDLMYVTKRNMENAVADLTKKLQHASDVIADAKKHLTQRIQILDDKMRKQYKMAQSIKDDVNKVQDTVTTIHDDLSVVQHTVAMLDGRLNSVLENQEVANMGLDYIIGFITANARRVPDSLQGTMPKEQPKLPGRSTSMLTYPGFQGLKDIAESLSSLDRSASDTIVPGGLDNLEKQRRPLLRATSTKC*