AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0099900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099900 MtrunA17_Chr8g0347051 92.383 407 8 1 1 407 155 538 0.0 774
Msa0099900 MtrunA17_Chr1g0150361 91.892 407 9 2 1 407 157 539 0.0 763
Msa0099900 MtrunA17_Chr4g0064711 58.396 399 141 2 1 397 75 450 7.04e-163 466
Msa0099900 MtrunA17_Chr8g0347041 75.532 94 0 1 1 94 108 178 7.27e-42 147
Msa0099900 MtrunA17_Chr8g0347341 74.468 94 1 1 1 94 108 178 4.24e-40 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099900 AT4G31780.2 77.506 409 67 2 1 407 148 533 0.0 653
Msa0099900 AT4G31780.3 72.874 435 67 3 1 407 148 559 0.0 639
Msa0099900 AT4G31780.1 81.616 359 64 1 51 407 8 366 0.0 613
Msa0099900 AT2G11810.1 56.968 409 148 3 1 404 79 464 1.44e-163 468
Msa0099900 AT5G20410.1 56.650 406 151 2 1 404 75 457 2.64e-159 457
Msa0099900 AT2G11810.4 59.882 339 131 2 71 404 3 341 6.67e-143 410
Msa0099900 AT2G11810.2 54.575 306 114 2 1 304 79 361 8.04e-113 335
Msa0099900 AT2G11810.3 54.221 308 116 2 1 306 79 363 9.90e-113 335

Find 151 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATAAAATTAATAATTT+TGG 0.100623 1_3:+6258610 Msa0099900:three_prime_UTR
TCCCATGCATTCTTCAATTT+TGG 0.143640 1_3:-6257575 None:intergenic
GTAGGCCATAAATCTTTATT+TGG 0.144917 1_3:-6255823 None:intergenic
GATGAACTAAGGAGAGATTT+AGG 0.146974 1_3:+6256765 Msa0099900:CDS
AGGTGTTTATTACCGATTTA+TGG 0.217636 1_3:+6254327 Msa0099900:intron
GTTCCCTATGTTGTTGAAAA+TGG 0.232287 1_3:+6258246 Msa0099900:CDS
AGTTAGTTATTGTAATAAAA+TGG 0.238030 1_3:-6252904 None:intergenic
CAAACCCAAATAAAGATTTA+TGG 0.240574 1_3:+6255818 Msa0099900:CDS
GGGAATGGTGTTGGTGGAAA+TGG 0.257208 1_3:+6253288 Msa0099900:five_prime_UTR
GGTTGAAGAGGTTAAGGTTT+TGG 0.268173 1_3:-6252841 None:intergenic
GTAATAAAATGGAATATAAA+TGG 0.278091 1_3:-6252893 None:intergenic
GGTGGTGGTGTTGGTGGTGA+GGG 0.289092 1_3:+6253267 Msa0099900:five_prime_UTR
TGGTGGTGGTGTTGGTGGTG+AGG 0.295208 1_3:+6253266 Msa0099900:five_prime_UTR
TCCAGCTTTCATTGCCCTAT+TGG 0.320907 1_3:-6255789 None:intergenic
TCCGATTGGATTCGCTTCGC+TGG 0.325021 1_3:+6253227 Msa0099900:five_prime_UTR
AGAATATGGGGATGATTATC+AGG 0.326808 1_3:+6253451 Msa0099900:CDS
GTGAACATGCTTCTGAAGTT+AGG 0.332228 1_3:-6253038 None:intergenic
ACTAAACATTAATATCAAAT+TGG 0.334470 1_3:-6258570 None:intergenic
ATGAACTAAGGAGAGATTTA+GGG 0.343617 1_3:+6256766 Msa0099900:CDS
ATGTAATCATTTAAAATAAT+AGG 0.345699 1_3:-6257745 None:intergenic
ACAAACTCAGTTCTATTGAT+TGG 0.345962 1_3:+6256946 Msa0099900:CDS
ATGGCCTCTGCAATTGTCCC+TGG 0.362907 1_3:-6257709 None:intergenic
AAAATTGTTGCGGACTGGTT+TGG 0.366157 1_3:+6258306 Msa0099900:CDS
TAATGAGGTTGAAGAGGTTA+AGG 0.368271 1_3:-6252847 None:intergenic
TGCACACTGATTATTATATC+AGG 0.373255 1_3:-6255523 None:intergenic
TAGGCCATAAATCTTTATTT+GGG 0.377476 1_3:-6255822 None:intergenic
TCTTCCTGCTGTATTATTGA+TGG 0.378039 1_3:+6256800 Msa0099900:CDS
TGGCATACCTTTGGCCGAAC+AGG 0.379500 1_3:-6255869 None:intergenic
TTTATAAAGGAAGGTCTAAC+AGG 0.381701 1_3:-6255845 None:intergenic
CAACTACAGATGTTGCCAAT+AGG 0.385092 1_3:+6255774 Msa0099900:CDS
GTGGTGGTGTTGGTGGTGAG+GGG 0.391464 1_3:+6253268 Msa0099900:five_prime_UTR
CTTCCTGCTGTATTATTGAT+GGG 0.393576 1_3:+6256801 Msa0099900:CDS
GGTGGTGAGGGGAATGGTGT+TGG 0.397626 1_3:+6253279 Msa0099900:five_prime_UTR
GGTGTTGGTGGTGAGGGGAA+TGG 0.402477 1_3:+6253273 Msa0099900:five_prime_UTR
GTTGATGACGGTGGTGGTGG+TGG 0.406284 1_3:+6253252 Msa0099900:five_prime_UTR
TTTGAATTAGGTTCACGAAT+TGG 0.407713 1_3:+6252982 Msa0099900:five_prime_UTR
TTCCTTTGATTTCAGGAAGC+TGG 0.409802 1_3:+6258219 Msa0099900:intron
GCGGTGGTGGTTATAAGTTT+AGG 0.412585 1_3:+6253154 Msa0099900:five_prime_UTR
GGAATGGTGTTGGTGGAAAT+GGG 0.413937 1_3:+6253289 Msa0099900:five_prime_UTR
TGGCCGAACAGGCTTTATAA+AGG 0.422561 1_3:-6255858 None:intergenic
CTATGGAACGGCCCCACGTC+TGG 0.423471 1_3:+6254436 Msa0099900:CDS
TTGTGGAGGATGACCTACTA+TGG 0.432904 1_3:+6254419 Msa0099900:CDS
GGAGTTGATGACGGTGGTGG+TGG 0.440641 1_3:+6253249 Msa0099900:five_prime_UTR
CCGATTGGATTCGCTTCGCT+GGG 0.440816 1_3:+6253228 Msa0099900:five_prime_UTR
AACTACAGATGTTGCCAATA+GGG 0.444447 1_3:+6255775 Msa0099900:CDS
CTTCCTTTATAAAGCCTGTT+CGG 0.450461 1_3:+6255855 Msa0099900:CDS
AAATGATTACATTGCCGGGC+AGG 0.456227 1_3:+6257756 Msa0099900:CDS
TGATGTGGAAGATGAAGGAT+TGG 0.459972 1_3:+6253319 Msa0099900:five_prime_UTR
TTGGGATTGAAGAGTGGTGA+GGG 0.460128 1_3:+6253338 Msa0099900:five_prime_UTR
GAGTTGAGTTGAGTTGAGTT+GGG 0.461490 1_3:-6252704 None:intergenic
TGCATTAAAACTAGCAAGGC+CGG 0.462786 1_3:+6258365 Msa0099900:CDS
TGAGTTGAGTTGAGTTGAGT+TGG 0.466063 1_3:-6252705 None:intergenic
GCCAATAGGGCAATGAAAGC+TGG 0.467418 1_3:+6255788 Msa0099900:CDS
TGCCCGAGCAGTAGCTTCAA+TGG 0.468895 1_3:-6256844 None:intergenic
TAGTGTATCAATACCTTCAC+TGG 0.470804 1_3:-6256975 None:intergenic
GGTGAGGGGAATGGTGTTGG+TGG 0.474033 1_3:+6253282 Msa0099900:five_prime_UTR
AATAGGCAGGCCTCGAATCA+TGG 0.478545 1_3:-6257728 None:intergenic
GAAGCTACTGCTCGGGCACT+TGG 0.480129 1_3:+6256849 Msa0099900:CDS
CCCAGCGAAGCGAATCCAAT+CGG 0.484023 1_3:-6253228 None:intergenic
TAATTAGAAAGAAGTGAAGC+TGG 0.489003 1_3:-6253060 None:intergenic
TACCAAAATTGAAGAATGCA+TGG 0.490489 1_3:+6257573 Msa0099900:CDS
ACGTGGGGCCGTTCCATAGT+AGG 0.492480 1_3:-6254432 None:intergenic
TGCACAGTGTTGTATTGTCT+TGG 0.492667 1_3:+6253600 Msa0099900:intron
TGGCCTCTGCAATTGTCCCT+GGG 0.498243 1_3:-6257708 None:intergenic
GAGAGATTTAGGGATGGATG+AGG 0.498586 1_3:+6256776 Msa0099900:CDS
TTCATTCATCGGAGAAAATG+AGG 0.501011 1_3:-6252806 None:intergenic
TTCCTGCTGTATTATTGATG+GGG 0.501628 1_3:+6256802 Msa0099900:CDS
GTGTTGGTGGAAATGGGAAT+GGG 0.503289 1_3:+6253295 Msa0099900:five_prime_UTR
GGTGTTGGTGGAAATGGGAA+TGG 0.504989 1_3:+6253294 Msa0099900:five_prime_UTR
TCCCATTGAAGCTACTGCTC+GGG 0.505735 1_3:+6256842 Msa0099900:CDS
TTCTCTAATAGGATGAACTA+AGG 0.511639 1_3:+6256754 Msa0099900:intron
AGTTTAAACAATAGCGGTGG+TGG 0.514164 1_3:+6253141 Msa0099900:five_prime_UTR
GCCCGAGCAGTAGCTTCAAT+GGG 0.516727 1_3:-6256843 None:intergenic
ATGTGTCTGAACCGCAAGAC+AGG 0.522436 1_3:+6253631 Msa0099900:CDS
ATATAGTGTTGGTGCTATTG+AGG 0.522508 1_3:+6253654 Msa0099900:CDS
TAGCGAAAATTGTTGCGGAC+TGG 0.524664 1_3:+6258301 Msa0099900:CDS
CTATTGGCAACATCTGTAGT+TGG 0.528409 1_3:-6255773 None:intergenic
TGAGGGGAAGAAAGTGAAGA+AGG 0.529010 1_3:+6253355 Msa0099900:five_prime_UTR
CTGTTAGGGTTCATTGTGAG+AGG 0.529931 1_3:+6253202 Msa0099900:five_prime_UTR
AACATTAATATCAAATTGGT+GGG 0.534272 1_3:-6258566 None:intergenic
TATGTTGTTGAAAATGGTTG+TGG 0.536014 1_3:+6258252 Msa0099900:CDS
ATTGTTTAAACTGAGTGAAA+CGG 0.538925 1_3:-6253130 None:intergenic
AAACATTAATATCAAATTGG+TGG 0.539747 1_3:-6258567 None:intergenic
GTGTGAGGTTGTTGAAGTAA+AGG 0.540601 1_3:-6253083 None:intergenic
CTGGGAGTTGATGACGGTGG+TGG 0.541803 1_3:+6253246 Msa0099900:five_prime_UTR
TATAAAGCCTGTTCGGCCAA+AGG 0.541804 1_3:+6255862 Msa0099900:CDS
GTCCCATTGAAGCTACTGCT+CGG 0.543348 1_3:+6256841 Msa0099900:CDS
TTACTAGCTCGTGCATGTCA+TGG 0.545685 1_3:-6258407 None:intergenic
AAAGTACTCTAAATTGCCTA+AGG 0.546044 1_3:+6258275 Msa0099900:CDS
AGAGGAACGTGTTGCATCAG+TGG 0.547034 1_3:-6255547 None:intergenic
TGTTTGTTTGTTTATTGCAG+AGG 0.547926 1_3:-6252766 None:intergenic
TCCTGCTGTATTATTGATGG+GGG 0.548155 1_3:+6256803 Msa0099900:CDS
TGGGTTGATGTGGAAGATGA+AGG 0.550981 1_3:+6253314 Msa0099900:five_prime_UTR
CTTTGTAATAATGCAATCAC+AGG 0.552893 1_3:-6257599 None:intergenic
TTTGTGTAATGAGGTTGAAG+AGG 0.554343 1_3:-6252853 None:intergenic
CTGTGATTGCATTATTACAA+AGG 0.560129 1_3:+6257600 Msa0099900:CDS
TGTGTGCTCAGACCATAAAT+CGG 0.560704 1_3:-6254339 None:intergenic
GGAATTTGATTGAACGGCCA+AGG 0.560974 1_3:-6254362 None:intergenic
CAACTTCAACATTCATAGCT+CGG 0.561242 1_3:+6254480 Msa0099900:CDS
GCTTCGCTGGGAGTTGATGA+CGG 0.562992 1_3:+6253240 Msa0099900:five_prime_UTR
ATTGCAGAGGCCATGATTCG+AGG 0.563068 1_3:+6257718 Msa0099900:CDS
AATCATTTAAAATAATAGGC+AGG 0.569875 1_3:-6257741 None:intergenic
CATTGTGAGAGGATTCCGAT+TGG 0.571847 1_3:+6253213 Msa0099900:five_prime_UTR
GGAGATTTATTAAATGACGA+GGG 0.574821 1_3:+6256870 Msa0099900:CDS
AGTGAAATGTGTTCATTCAT+CGG 0.575172 1_3:-6252817 None:intergenic
CGAACAGGCTTTATAAAGGA+AGG 0.575344 1_3:-6255854 None:intergenic
CAGAACTAAACTAACCATGT+TGG 0.579591 1_3:-6255646 None:intergenic
TGAGAACCACATTACCTGCC+CGG 0.584401 1_3:-6257770 None:intergenic
ATCACAAGAATCTGACCTGT+GGG 0.585615 1_3:-6256897 None:intergenic
TGATTGGAAGATTCCAGTGA+AGG 0.586288 1_3:+6256962 Msa0099900:CDS
CGCAAGACAGGATATAGTGT+TGG 0.592061 1_3:+6253643 Msa0099900:CDS
GAAATGGGAATGGGTTGATG+TGG 0.593707 1_3:+6253304 Msa0099900:five_prime_UTR
ACTAAACTAACCATGTTGGA+TGG 0.594783 1_3:-6255642 None:intergenic
TTGATGAGTGATACTGGTGG+TGG 0.596075 1_3:+6253386 Msa0099900:exon
TGGGATTGAAGAGTGGTGAG+GGG 0.596691 1_3:+6253339 Msa0099900:five_prime_UTR
CCTGCTGTATTATTGATGGG+GGG 0.598824 1_3:+6256804 Msa0099900:CDS
TGGTCATCGTGCTTCTGCTG+AGG 0.600552 1_3:+6253406 Msa0099900:CDS
AATGTGAAAGGCAGCAAAGG+TGG 0.603076 1_3:+6258512 Msa0099900:three_prime_UTR
ACCAAAATTGAAGAATGCAT+GGG 0.604354 1_3:+6257574 Msa0099900:CDS
GATGTGGAAGATGAAGGATT+GGG 0.606638 1_3:+6253320 Msa0099900:five_prime_UTR
TGAGCACATGCCATCCAACA+TGG 0.607260 1_3:+6255632 Msa0099900:CDS
TAAAGGAAGGTCTAACAGGT+AGG 0.611675 1_3:-6255841 None:intergenic
GGTCAGATTCTTGTGATCTG+TGG 0.618567 1_3:+6256903 Msa0099900:CDS
AAAATGCATTAAAACTAGCA+AGG 0.621362 1_3:+6258361 Msa0099900:CDS
TGGCCCAGGGACAATTGCAG+AGG 0.622682 1_3:+6257705 Msa0099900:CDS
TCACTCAGTTTAAACAATAG+CGG 0.624973 1_3:+6253135 Msa0099900:five_prime_UTR
CTTCAACAACCTCACACGTG+TGG 0.626249 1_3:+6253089 Msa0099900:five_prime_UTR
CTCAGTTTAAACAATAGCGG+TGG 0.637662 1_3:+6253138 Msa0099900:five_prime_UTR
ACTAAGGAGAGATTTAGGGA+TGG 0.645174 1_3:+6256770 Msa0099900:CDS
TGGAGATTTATTAAATGACG+AGG 0.645340 1_3:+6256869 Msa0099900:CDS
TTTGACTGATGAACCAGACG+TGG 0.647032 1_3:-6254449 None:intergenic
TGGTGAAACATGGACCGTTG+TGG 0.648644 1_3:+6254402 Msa0099900:CDS
TATGGTCTGAGCACACACCT+TGG 0.651270 1_3:+6254345 Msa0099900:CDS
CTTGACCTCAAAATGCGAAG+AGG 0.652018 1_3:-6255565 None:intergenic
GAGATTTATTAAATGACGAG+GGG 0.652249 1_3:+6256871 Msa0099900:CDS
GGAGATAGCGAAAATTGTTG+CGG 0.653478 1_3:+6258296 Msa0099900:CDS
TTGACTGATGAACCAGACGT+GGG 0.657459 1_3:-6254448 None:intergenic
GATCACAAGAATCTGACCTG+TGG 0.659557 1_3:-6256898 None:intergenic
GAGGATGACCTACTATGGAA+CGG 0.659969 1_3:+6254424 Msa0099900:CDS
AGATTTATTAAATGACGAGG+GGG 0.661667 1_3:+6256872 Msa0099900:CDS
ATTGGGATTGAAGAGTGGTG+AGG 0.665244 1_3:+6253337 Msa0099900:five_prime_UTR
ATGATGATGCCACACGTGTG+AGG 0.673938 1_3:-6253098 None:intergenic
GAAGGATTGGGATTGAAGAG+TGG 0.674436 1_3:+6253332 Msa0099900:five_prime_UTR
CAACACTATATCCTGTCTTG+CGG 0.679913 1_3:-6253642 None:intergenic
GCTCAAATCTGTAATAACTG+TGG 0.689167 1_3:-6255614 None:intergenic
TGAAACATGGACCGTTGTGG+AGG 0.709765 1_3:+6254405 Msa0099900:CDS
TAGTAGGTCATCCTCCACAA+CGG 0.715366 1_3:-6254416 None:intergenic
TGACTGATGAACCAGACGTG+GGG 0.721761 1_3:-6254447 None:intergenic
TCGCTGGGAGTTGATGACGG+TGG 0.773048 1_3:+6253243 Msa0099900:five_prime_UTR
TGTTACAAAAGAACCCAATG+CGG 0.774333 1_3:+6252957 Msa0099900:five_prime_UTR
GTACAGCTTAATCAACACTG+AGG 0.822600 1_3:+6258460 Msa0099900:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAAAATTAATAATTT+TGG + chr1_3:6258610-6258629 Msa0099900:three_prime_UTR 0.0%
!! TAATAAATTCATGAATAATT+TGG + chr1_3:6254174-6254193 Msa0099900:intron 10.0%
!! TAAATAAATAAATGTTGATA+TGG + chr1_3:6257501-6257520 Msa0099900:intron 10.0%
!!! ATGTAATCATTTAAAATAAT+AGG - chr1_3:6257748-6257767 None:intergenic 10.0%
!! GTAATAAAATGGAATATAAA+TGG - chr1_3:6252896-6252915 None:intergenic 15.0%
!! AGTTAGTTATTGTAATAAAA+TGG - chr1_3:6252907-6252926 None:intergenic 15.0%
!!! AATTTTAGTTTTTGTGTAAT+TGG + chr1_3:6253486-6253505 Msa0099900:intron 15.0%
!!! GATTTTTAGGTAAAAATTTA+GGG + chr1_3:6253721-6253740 Msa0099900:intron 15.0%
!!! TCTTATTTCTTGTATTTTTT+AGG + chr1_3:6255720-6255739 Msa0099900:intron 15.0%
!! AACCTCAAATAATAAATAAA+CGG - chr1_3:6256168-6256187 None:intergenic 15.0%
!!! CTCAAAATTCAAATTTTTAA+TGG + chr1_3:6256399-6256418 Msa0099900:intron 15.0%
!! TCAATTGTTTGATATTTAAT+AGG + chr1_3:6256435-6256454 Msa0099900:intron 15.0%
!! TTGGTAAAAACAATAATTTA+GGG - chr1_3:6257531-6257550 None:intergenic 15.0%
!! ATTGGTAAAAACAATAATTT+AGG - chr1_3:6257532-6257551 None:intergenic 15.0%
!! ATTAGATACTAGTTAAATTT+AGG + chr1_3:6258110-6258129 Msa0099900:intron 15.0%
!! ACTAAACATTAATATCAAAT+TGG - chr1_3:6258573-6258592 None:intergenic 15.0%
!!! TTTGTTAATTTTGTGTAATG+AGG - chr1_3:6252865-6252884 None:intergenic 20.0%
!! GTAATTAGAGGAATAAAATA+TGG + chr1_3:6253676-6253695 Msa0099900:intron 20.0%
!!! GGATTTTTAGGTAAAAATTT+AGG + chr1_3:6253720-6253739 Msa0099900:intron 20.0%
!! TAAATTCATGAATAATTTGG+TGG + chr1_3:6254177-6254196 Msa0099900:intron 20.0%
!! TAACTAACAACTTAAAAACA+GGG - chr1_3:6254666-6254685 None:intergenic 20.0%
!! TTGAAAATAACTTTATACGT+AGG + chr1_3:6255225-6255244 Msa0099900:intron 20.0%
!! TGTATAAAACAATTCAGAAA+AGG - chr1_3:6255960-6255979 None:intergenic 20.0%
!!! AATTGTTTTATACAATGAGA+TGG + chr1_3:6255966-6255985 Msa0099900:intron 20.0%
!!! ATTGTTTTATACAATGAGAT+GGG + chr1_3:6255967-6255986 Msa0099900:intron 20.0%
!! ATTGTTAATATGATTGTTCA+TGG + chr1_3:6256288-6256307 Msa0099900:intron 20.0%
!! AAGATATTAAGTGTAAAATC+GGG - chr1_3:6256333-6256352 None:intergenic 20.0%
!! GAAGATATTAAGTGTAAAAT+CGG - chr1_3:6256334-6256353 None:intergenic 20.0%
!! TATTTCATGTTTATGCAATT+TGG + chr1_3:6256694-6256713 Msa0099900:intron 20.0%
!!! TTACTTCAATACTCTTATTT+GGG - chr1_3:6257220-6257239 None:intergenic 20.0%
!! TTTACTTCAATACTCTTATT+TGG - chr1_3:6257221-6257240 None:intergenic 20.0%
!!! AAGAGTATTGAAGTAAAAAA+TGG + chr1_3:6257224-6257243 Msa0099900:intron 20.0%
!! TTCACATCTTTAATTATTCT+GGG - chr1_3:6257266-6257285 None:intergenic 20.0%
!! TTTCACATCTTTAATTATTC+TGG - chr1_3:6257267-6257286 None:intergenic 20.0%
!! TTTAGATATTCATTGTACAA+GGG - chr1_3:6257390-6257409 None:intergenic 20.0%
!! ATTTAGATATTCATTGTACA+AGG - chr1_3:6257391-6257410 None:intergenic 20.0%
!! TGGTAAAAACAATAATTTAG+GGG - chr1_3:6257530-6257549 None:intergenic 20.0%
!!! ATTGTTTTTACCAATGTTTT+AGG + chr1_3:6257537-6257556 Msa0099900:intron 20.0%
!!! AATCATTTAAAATAATAGGC+AGG - chr1_3:6257744-6257763 None:intergenic 20.0%
!!! ATTTTAAATGATTACATTGC+CGG + chr1_3:6257751-6257770 Msa0099900:CDS 20.0%
!! AACATTAATATCAAATTGGT+GGG - chr1_3:6258569-6258588 None:intergenic 20.0%
!! AAACATTAATATCAAATTGG+TGG - chr1_3:6258570-6258589 None:intergenic 20.0%
! ATTGTTTAAACTGAGTGAAA+CGG - chr1_3:6253133-6253152 None:intergenic 25.0%
!!! ATGATTTTAATAGAGCTGTT+AGG + chr1_3:6253187-6253206 Msa0099900:five_prime_UTR 25.0%
!!! TGATTTTAATAGAGCTGTTA+GGG + chr1_3:6253188-6253207 Msa0099900:five_prime_UTR 25.0%
!!! CTGCTTTTTATCAAGAATAT+GGG + chr1_3:6253438-6253457 Msa0099900:CDS 25.0%
!!! TGCTTTTTATCAAGAATATG+GGG + chr1_3:6253439-6253458 Msa0099900:CDS 25.0%
! TAGTAAATGACGTAATCAAA+TGG + chr1_3:6253570-6253589 Msa0099900:intron 25.0%
! CAGTAGAATTAGATAGAAAT+AGG + chr1_3:6253843-6253862 Msa0099900:intron 25.0%
! TTGACTATGTAAAATGATTC+TGG + chr1_3:6253913-6253932 Msa0099900:intron 25.0%
! ATCAGATAGTTTACTACAAA+TGG - chr1_3:6254061-6254080 None:intergenic 25.0%
! TCTTTCATTAAAAGTCCAAA+AGG + chr1_3:6254096-6254115 Msa0099900:intron 25.0%
! TTTGACGATTAATTTATGCA+TGG + chr1_3:6254151-6254170 Msa0099900:intron 25.0%
!!! TTGTTGTTTTGTTTACACTT+TGG + chr1_3:6254290-6254309 Msa0099900:intron 25.0%
!!! CTTTTAGGAATTTGATTGAA+CGG - chr1_3:6254371-6254390 None:intergenic 25.0%
! AACTTATCAGTTATCCATTA+CGG - chr1_3:6254590-6254609 None:intergenic 25.0%
! GTAACTAACAACTTAAAAAC+AGG - chr1_3:6254667-6254686 None:intergenic 25.0%
!!! TTTAAGTTGTTAGTTACCAT+AGG + chr1_3:6254670-6254689 Msa0099900:intron 25.0%
! TATATGTTTGAATGATCCTA+TGG - chr1_3:6254689-6254708 None:intergenic 25.0%
!! ATGTGCAATATACAGTTTTT+CGG + chr1_3:6254814-6254833 Msa0099900:intron 25.0%
! CATATAAAGATGATGTTTGT+GGG - chr1_3:6255033-6255052 None:intergenic 25.0%
! ACATATAAAGATGATGTTTG+TGG - chr1_3:6255034-6255053 None:intergenic 25.0%
! ACAAACATCATCTTTATATG+TGG + chr1_3:6255033-6255052 Msa0099900:intron 25.0%
!! AGATATTTTTCATCCAATGT+GGG - chr1_3:6255206-6255225 None:intergenic 25.0%
!! AAGATATTTTTCATCCAATG+TGG - chr1_3:6255207-6255226 None:intergenic 25.0%
! AATAACATTCTCTTAGAATC+TGG - chr1_3:6255302-6255321 None:intergenic 25.0%
!!! TCTTGTATATTTTTACAGTG+AGG + chr1_3:6255474-6255493 Msa0099900:intron 25.0%
!! TCAGACTATAGGTAATATTT+TGG - chr1_3:6255692-6255711 None:intergenic 25.0%
! CAAACCCAAATAAAGATTTA+TGG + chr1_3:6255818-6255837 Msa0099900:CDS 25.0%
!! TAGGCCATAAATCTTTATTT+GGG - chr1_3:6255825-6255844 None:intergenic 25.0%
!! GTTTAGTAATTCAACTTGTT+AGG + chr1_3:6256020-6256039 Msa0099900:intron 25.0%
! ATTTATGACAACAATGAGAT+GGG + chr1_3:6256073-6256092 Msa0099900:intron 25.0%
! ATAAATAAACGGCAAAATCA+TGG - chr1_3:6256157-6256176 None:intergenic 25.0%
!! TGCCGTTTATTTATTATTTG+AGG + chr1_3:6256163-6256182 Msa0099900:intron 25.0%
! GATTCTGATTCTTTAACTAA+AGG + chr1_3:6256457-6256476 Msa0099900:intron 25.0%
! CTAAAATTATAATAGTCCGT+TGG - chr1_3:6256485-6256504 None:intergenic 25.0%
!!! TTTTAGTTTAGTGTACATGA+TGG + chr1_3:6256499-6256518 Msa0099900:intron 25.0%
! TATTGATACACTAATTGTTC+CGG + chr1_3:6256985-6257004 Msa0099900:intron 25.0%
! AGCAAAAAAAATGTTACTCA+TGG + chr1_3:6257137-6257156 Msa0099900:intron 25.0%
! ATTTATAACTTATTGCTGAG+CGG + chr1_3:6257298-6257317 Msa0099900:intron 25.0%
! TTAGATATTCATTGTACAAG+GGG - chr1_3:6257389-6257408 None:intergenic 25.0%
!! ACAGAAAGTTTTCTTTCTTA+AGG + chr1_3:6257462-6257481 Msa0099900:intron 25.0%
!! TTTTAAATGATTACATTGCC+GGG + chr1_3:6257752-6257771 Msa0099900:CDS 25.0%
! GCAAATAAAAAATCATGACA+AGG - chr1_3:6257813-6257832 None:intergenic 25.0%
!! TAACAACACTGGTTAAATTT+AGG + chr1_3:6258052-6258071 Msa0099900:intron 25.0%
!!! TGCTAGTTTTAATGCATTTT+GGG - chr1_3:6258361-6258380 None:intergenic 25.0%
!!! TTGCTAGTTTTAATGCATTT+TGG - chr1_3:6258362-6258381 None:intergenic 25.0%
! AAAATGCATTAAAACTAGCA+AGG + chr1_3:6258361-6258380 Msa0099900:CDS 25.0%
!! TGTTTTGTGAAAAATGTGAA+AGG + chr1_3:6258500-6258519 Msa0099900:three_prime_UTR 25.0%
!!! GGTTTTTAAGTAAGTGGATT+GGG - chr1_3:6252686-6252705 None:intergenic 30.0%
TGTTTGTTTGTTTATTGCAG+AGG - chr1_3:6252769-6252788 None:intergenic 30.0%
AGTGAAATGTGTTCATTCAT+CGG - chr1_3:6252820-6252839 None:intergenic 30.0%
TTTGAATTAGGTTCACGAAT+TGG + chr1_3:6252982-6253001 Msa0099900:five_prime_UTR 30.0%
TAATTAGAAAGAAGTGAAGC+TGG - chr1_3:6253063-6253082 None:intergenic 30.0%
TCACTCAGTTTAAACAATAG+CGG + chr1_3:6253135-6253154 Msa0099900:five_prime_UTR 30.0%
!! TTGATTTTGATGAGTGATAC+TGG + chr1_3:6253380-6253399 Msa0099900:exon 30.0%
!!! GCTGCTTTTTATCAAGAATA+TGG + chr1_3:6253437-6253456 Msa0099900:CDS 30.0%
! TTAGGTAAAAATTTAGGGTG+TGG + chr1_3:6253726-6253745 Msa0099900:intron 30.0%
CATTTGTGTATTGAGTAATG+TGG + chr1_3:6253765-6253784 Msa0099900:intron 30.0%
!! GTTGTTTTCGTAAGCTATTT+TGG + chr1_3:6253814-6253833 Msa0099900:intron 30.0%
!! ATGAATAATTTGGTGGTGAA+TGG + chr1_3:6254184-6254203 Msa0099900:intron 30.0%
!!! AATTTTAGGATTCAGAGTCA+TGG + chr1_3:6254208-6254227 Msa0099900:intron 30.0%
!! AGGTGTTTATTACCGATTTA+TGG + chr1_3:6254327-6254346 Msa0099900:intron 30.0%
! TCCTAAAAGCTATAGCTTTT+TGG + chr1_3:6254382-6254401 Msa0099900:CDS 30.0%
! ACCAAAAAGCTATAGCTTTT+AGG - chr1_3:6254386-6254405 None:intergenic 30.0%
!! TATAGCTTTTTGGTGAAACA+TGG + chr1_3:6254392-6254411 Msa0099900:CDS 30.0%
TGAAGTTATTTGACAAGAAC+TGG - chr1_3:6254534-6254553 None:intergenic 30.0%
TGAATTAGTATATGCCGTAA+TGG + chr1_3:6254573-6254592 Msa0099900:intron 30.0%
!! GTTTTATTGTCGTTATGAAC+TGG + chr1_3:6254727-6254746 Msa0099900:intron 30.0%
ATAAATGCATGTATGATGTG+TGG - chr1_3:6254790-6254809 None:intergenic 30.0%
TTACAATAAAAATGACCGCA+CGG + chr1_3:6254873-6254892 Msa0099900:intron 30.0%
ACATCATCTTTATATGTGGA+AGG + chr1_3:6255037-6255056 Msa0099900:intron 30.0%
TGATACAATCTTAGAACTTG+AGG - chr1_3:6255081-6255100 None:intergenic 30.0%
! CAGAAGTTATTGTAATTTGC+TGG + chr1_3:6255356-6255375 Msa0099900:intron 30.0%
! TGCACACTGATTATTATATC+AGG - chr1_3:6255526-6255545 None:intergenic 30.0%
AGATGTCAAAATCAGACTAT+AGG - chr1_3:6255703-6255722 None:intergenic 30.0%
GTAGGCCATAAATCTTTATT+TGG - chr1_3:6255826-6255845 None:intergenic 30.0%
TTTATAAAGGAAGGTCTAAC+AGG - chr1_3:6255848-6255867 None:intergenic 30.0%
TTCTTGACTTCTTATAGCTA+TGG + chr1_3:6255894-6255913 Msa0099900:intron 30.0%
CAATTCAGAAAAGGTCATTT+AGG - chr1_3:6255951-6255970 None:intergenic 30.0%
ATACAATGAGATGGGATAAT+AGG + chr1_3:6255975-6255994 Msa0099900:intron 30.0%
CATCTCATTGTTGTCATAAA+TGG - chr1_3:6256074-6256093 None:intergenic 30.0%
CATTTATGACAACAATGAGA+TGG + chr1_3:6256072-6256091 Msa0099900:intron 30.0%
GTTAATATGATTGTTCATGG+CGG + chr1_3:6256291-6256310 Msa0099900:intron 30.0%
CTATTAACCATGTGTTTGAT+TGG + chr1_3:6256635-6256654 Msa0099900:intron 30.0%
TTCTCTAATAGGATGAACTA+AGG + chr1_3:6256754-6256773 Msa0099900:intron 30.0%
ATGAACTAAGGAGAGATTTA+GGG + chr1_3:6256766-6256785 Msa0099900:CDS 30.0%
TGGAGATTTATTAAATGACG+AGG + chr1_3:6256869-6256888 Msa0099900:CDS 30.0%
GGAGATTTATTAAATGACGA+GGG + chr1_3:6256870-6256889 Msa0099900:CDS 30.0%
GAGATTTATTAAATGACGAG+GGG + chr1_3:6256871-6256890 Msa0099900:CDS 30.0%
AGATTTATTAAATGACGAGG+GGG + chr1_3:6256872-6256891 Msa0099900:CDS 30.0%
ACAAACTCAGTTCTATTGAT+TGG + chr1_3:6256946-6256965 Msa0099900:CDS 30.0%
! AATCTAGAACATGCATATAC+TGG - chr1_3:6257031-6257050 None:intergenic 30.0%
! TTCAATACTCTTATTTGGGA+CGG - chr1_3:6257216-6257235 None:intergenic 30.0%
!! TTTACCAATGTTTTAGGTCA+TGG + chr1_3:6257543-6257562 Msa0099900:intron 30.0%
!! TTACCAATGTTTTAGGTCAT+GGG + chr1_3:6257544-6257563 Msa0099900:intron 30.0%
TACCAAAATTGAAGAATGCA+TGG + chr1_3:6257573-6257592 Msa0099900:CDS 30.0%
ACCAAAATTGAAGAATGCAT+GGG + chr1_3:6257574-6257593 Msa0099900:CDS 30.0%
CTTTGTAATAATGCAATCAC+AGG - chr1_3:6257602-6257621 None:intergenic 30.0%
CTGTGATTGCATTATTACAA+AGG + chr1_3:6257600-6257619 Msa0099900:CDS 30.0%
GATTGCATTATTACAAAGGT+TGG + chr1_3:6257604-6257623 Msa0099900:intron 30.0%
TTGTGAAATAGTGTCTATAG+CGG - chr1_3:6257952-6257971 None:intergenic 30.0%
! TAACCAGTGTTGTTAAATAG+TGG - chr1_3:6258047-6258066 None:intergenic 30.0%
TACTAGTTAAATTTAGGCTG+AGG + chr1_3:6258116-6258135 Msa0099900:intron 30.0%
ACAACCATATTCAATCACTT+GGG - chr1_3:6258186-6258205 None:intergenic 30.0%
! ACATCATTTCCTTTGATTTC+AGG + chr1_3:6258212-6258231 Msa0099900:intron 30.0%
! CAACCATTTTCAACAACATA+GGG - chr1_3:6258252-6258271 None:intergenic 30.0%
! ACAACCATTTTCAACAACAT+AGG - chr1_3:6258253-6258272 None:intergenic 30.0%
TATGTTGTTGAAAATGGTTG+TGG + chr1_3:6258252-6258271 Msa0099900:CDS 30.0%
! AAAGTACTCTAAATTGCCTA+AGG + chr1_3:6258275-6258294 Msa0099900:CDS 30.0%
! ACAATTTTGAACACAGAATC+CGG - chr1_3:6258387-6258406 None:intergenic 30.0%
GTGTATCACTAGTAAAAATG+AGG + chr1_3:6258534-6258553 Msa0099900:three_prime_UTR 30.0%
!!! AGTAAGTGGATTGGGTTTTT+TGG - chr1_3:6252678-6252697 None:intergenic 35.0%
!!! GGGTTTTTAAGTAAGTGGAT+TGG - chr1_3:6252687-6252706 None:intergenic 35.0%
!!! GAGTTGGGTTTTTAAGTAAG+TGG - chr1_3:6252692-6252711 None:intergenic 35.0%
TTCATTCATCGGAGAAAATG+AGG - chr1_3:6252809-6252828 None:intergenic 35.0%
TAATGAGGTTGAAGAGGTTA+AGG - chr1_3:6252850-6252869 None:intergenic 35.0%
TTTGTGTAATGAGGTTGAAG+AGG - chr1_3:6252856-6252875 None:intergenic 35.0%
TGTTACAAAAGAACCCAATG+CGG + chr1_3:6252957-6252976 Msa0099900:five_prime_UTR 35.0%
CCTAATTCAAAAACCGCATT+GGG - chr1_3:6252973-6252992 None:intergenic 35.0%
ACCTAATTCAAAAACCGCAT+TGG - chr1_3:6252974-6252993 None:intergenic 35.0%
!! ATTTTGATGAGTGATACTGG+TGG + chr1_3:6253383-6253402 Msa0099900:exon 35.0%
AGAATATGGGGATGATTATC+AGG + chr1_3:6253451-6253470 Msa0099900:CDS 35.0%
!! ATATAGTGTTGGTGCTATTG+AGG + chr1_3:6253654-6253673 Msa0099900:CDS 35.0%
!! GTGCTTTTGTTTAAGAGCAA+GGG + chr1_3:6253698-6253717 Msa0099900:intron 35.0%
!! TGCTTTTGTTTAAGAGCAAG+GGG + chr1_3:6253699-6253718 Msa0099900:intron 35.0%
! TTAAGAGCAAGGGGATTTTT+AGG + chr1_3:6253708-6253727 Msa0099900:intron 35.0%
TATGTGTATGCTTCGTTATG+TGG + chr1_3:6253867-6253886 Msa0099900:intron 35.0%
AAAAGTCCAAAAGGCTAACT+TGG + chr1_3:6254105-6254124 Msa0099900:intron 35.0%
!! TGGTGGTGAATGGTAATTTT+AGG + chr1_3:6254194-6254213 Msa0099900:intron 35.0%
GTCATGGAATATTACTGTGA+AGG + chr1_3:6254224-6254243 Msa0099900:intron 35.0%
CAACTTCAACATTCATAGCT+CGG + chr1_3:6254480-6254499 Msa0099900:CDS 35.0%
TGACTCATACATGAAAGTCA+GGG + chr1_3:6254621-6254640 Msa0099900:intron 35.0%
TATGAACTGGATTTCTCTAG+TGG + chr1_3:6254740-6254759 Msa0099900:intron 35.0%
TAACTTGGCAATATTCAGCA+CGG + chr1_3:6254896-6254915 Msa0099900:intron 35.0%
CTGTCATGCACTTTATTGTT+AGG - chr1_3:6254946-6254965 None:intergenic 35.0%
CATCTTTATATGTGGAAGGA+AGG + chr1_3:6255041-6255060 Msa0099900:intron 35.0%
ATTGTATCAGAGCCTATTCA+AGG + chr1_3:6255092-6255111 Msa0099900:intron 35.0%
TAGATTTGACAAATGGAGCA+TGG - chr1_3:6255157-6255176 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG - chr1_3:6255272-6255291 None:intergenic 35.0%
! GATGCATATGTTGTTTGTTC+TGG + chr1_3:6255383-6255402 Msa0099900:intron 35.0%
AGTATAATATCACGTGTCAG+AGG + chr1_3:6255442-6255461 Msa0099900:intron 35.0%
! TTTTACAGTGAGGTTGCTAA+AGG + chr1_3:6255484-6255503 Msa0099900:intron 35.0%
GCTCAAATCTGTAATAACTG+TGG - chr1_3:6255617-6255636 None:intergenic 35.0%
ACTAAACTAACCATGTTGGA+TGG - chr1_3:6255645-6255664 None:intergenic 35.0%
CAGAACTAAACTAACCATGT+TGG - chr1_3:6255649-6255668 None:intergenic 35.0%
!! CAACATGGTTAGTTTAGTTC+TGG + chr1_3:6255647-6255666 Msa0099900:intron 35.0%
AACTACAGATGTTGCCAATA+GGG + chr1_3:6255775-6255794 Msa0099900:CDS 35.0%
CTTCCTTTATAAAGCCTGTT+CGG + chr1_3:6255855-6255874 Msa0099900:CDS 35.0%
GCTATAAGAAGTCAAGAACA+TGG - chr1_3:6255892-6255911 None:intergenic 35.0%
!! AGCCATTTTCTTTCTTGCTA+AGG + chr1_3:6256101-6256120 Msa0099900:intron 35.0%
!! GCCATTTTCTTTCTTGCTAA+GGG + chr1_3:6256102-6256121 Msa0099900:intron 35.0%
ACCCTTAGCAAGAAAGAAAA+TGG - chr1_3:6256106-6256125 None:intergenic 35.0%
! TTTTCTTTCTTGCTAAGGGT+AGG + chr1_3:6256106-6256125 Msa0099900:intron 35.0%
! TGTATTGTCGACTACAATCT+TGG + chr1_3:6256131-6256150 Msa0099900:intron 35.0%
GCTCAGATTAACAATAGATG+TGG - chr1_3:6256227-6256246 None:intergenic 35.0%
CATCTATTGTTAATCTGAGC+TGG + chr1_3:6256227-6256246 Msa0099900:intron 35.0%
TATCTTCCGTAGTTAGCATA+TGG + chr1_3:6256347-6256366 Msa0099900:intron 35.0%
ACTTCTCCATATGCTAACTA+CGG - chr1_3:6256356-6256375 None:intergenic 35.0%
TCTTTAACTAAAGGCTCCAA+CGG + chr1_3:6256466-6256485 Msa0099900:intron 35.0%
GATGAACTAAGGAGAGATTT+AGG + chr1_3:6256765-6256784 Msa0099900:CDS 35.0%
TCTTCCTGCTGTATTATTGA+TGG + chr1_3:6256800-6256819 Msa0099900:CDS 35.0%
CTTCCTGCTGTATTATTGAT+GGG + chr1_3:6256801-6256820 Msa0099900:CDS 35.0%
TTCCTGCTGTATTATTGATG+GGG + chr1_3:6256802-6256821 Msa0099900:CDS 35.0%
TAGTGTATCAATACCTTCAC+TGG - chr1_3:6256978-6256997 None:intergenic 35.0%
! ATAGACTGTTGTCTAGTCTT+AGG + chr1_3:6257062-6257081 Msa0099900:intron 35.0%
AAAAAATGGAGTAGACGAGT+AGG + chr1_3:6257238-6257257 Msa0099900:intron 35.0%
TTCTTAAGGTAGAAGATGTC+TGG + chr1_3:6257476-6257495 Msa0099900:intron 35.0%
TCTTAAGGTAGAAGATGTCT+GGG + chr1_3:6257477-6257496 Msa0099900:intron 35.0%
AATCCCATGACCTAAAACAT+TGG - chr1_3:6257550-6257569 None:intergenic 35.0%
! TCCCATGCATTCTTCAATTT+TGG - chr1_3:6257578-6257597 None:intergenic 35.0%
!!! TCCTTTTGTGTTGCTTTTGT+AGG + chr1_3:6257681-6257700 Msa0099900:intron 35.0%
AAAAAATCATGACAAGGTCG+AGG - chr1_3:6257807-6257826 None:intergenic 35.0%
!! AAAGTTAGCTTGCACTATTG+TGG + chr1_3:6257835-6257854 Msa0099900:intron 35.0%
AATTTCAGAGTTGCAAGTTG+TGG + chr1_3:6257873-6257892 Msa0099900:intron 35.0%
ACTATAGCACTGTTATGCAA+CGG - chr1_3:6257928-6257947 None:intergenic 35.0%
! GTGTTGTTAAATAGTGGCTA+TGG - chr1_3:6258041-6258060 None:intergenic 35.0%
TAGCCACTATTTAACAACAC+TGG + chr1_3:6258041-6258060 Msa0099900:intron 35.0%
TACACCCAAGTGATTGAATA+TGG + chr1_3:6258179-6258198 Msa0099900:intron 35.0%
CACAACCATATTCAATCACT+TGG - chr1_3:6258187-6258206 None:intergenic 35.0%
GTTCCCTATGTTGTTGAAAA+TGG + chr1_3:6258246-6258265 Msa0099900:CDS 35.0%
! ACAATTTTCGCTATCTCCTT+AGG - chr1_3:6258294-6258313 None:intergenic 35.0%
!!! GGACATTGCTTTTAGTTCAT+CGG - chr1_3:6258340-6258359 None:intergenic 35.0%
AAAAATGTGAAAGGCAGCAA+AGG + chr1_3:6258509-6258528 Msa0099900:three_prime_UTR 35.0%
!! GAGTTGAGTTGAGTTGAGTT+GGG - chr1_3:6252707-6252726 None:intergenic 40.0%
!! TGAGTTGAGTTGAGTTGAGT+TGG - chr1_3:6252708-6252727 None:intergenic 40.0%
! GGTTGAAGAGGTTAAGGTTT+TGG - chr1_3:6252844-6252863 None:intergenic 40.0%
! CCCAATGCGGTTTTTGAATT+AGG + chr1_3:6252970-6252989 Msa0099900:five_prime_UTR 40.0%
!! GTGAACATGCTTCTGAAGTT+AGG - chr1_3:6253041-6253060 None:intergenic 40.0%
GTGTGAGGTTGTTGAAGTAA+AGG - chr1_3:6253086-6253105 None:intergenic 40.0%
CTCAGTTTAAACAATAGCGG+TGG + chr1_3:6253138-6253157 Msa0099900:five_prime_UTR 40.0%
AGTTTAAACAATAGCGGTGG+TGG + chr1_3:6253141-6253160 Msa0099900:five_prime_UTR 40.0%
TGATGTGGAAGATGAAGGAT+TGG + chr1_3:6253319-6253338 Msa0099900:five_prime_UTR 40.0%
GATGTGGAAGATGAAGGATT+GGG + chr1_3:6253320-6253339 Msa0099900:five_prime_UTR 40.0%
TGCACAGTGTTGTATTGTCT+TGG + chr1_3:6253600-6253619 Msa0099900:intron 40.0%
CAACACTATATCCTGTCTTG+CGG - chr1_3:6253645-6253664 None:intergenic 40.0%
!! GGTGCTATTGAGGTAATTAG+AGG + chr1_3:6253664-6253683 Msa0099900:intron 40.0%
!! GGTGCTTTTGTTTAAGAGCA+AGG + chr1_3:6253697-6253716 Msa0099900:intron 40.0%
!!! CTAGTTCCAAGTTAGCCTTT+TGG - chr1_3:6254114-6254133 None:intergenic 40.0%
!! CTTTGGAGTTAATGCTATGC+AGG + chr1_3:6254307-6254326 Msa0099900:intron 40.0%
TGTGTGCTCAGACCATAAAT+CGG - chr1_3:6254342-6254361 None:intergenic 40.0%
!! TTCATAGCTCGGTGAGATTT+TGG + chr1_3:6254491-6254510 Msa0099900:intron 40.0%
GTGACTCATACATGAAAGTC+AGG + chr1_3:6254620-6254639 Msa0099900:intron 40.0%
! ATGAAAGTCAGGGCATTAAC+TGG + chr1_3:6254631-6254650 Msa0099900:intron 40.0%
AATATTGCCAAGTTACCGTG+CGG - chr1_3:6254891-6254910 None:intergenic 40.0%
! CACGGTTCGGATTTGATATT+CGG + chr1_3:6254914-6254933 Msa0099900:intron 40.0%
TGCAACTGCAGGTAATAAGA+GGG - chr1_3:6254982-6255001 None:intergenic 40.0%
TTGCAACTGCAGGTAATAAG+AGG - chr1_3:6254983-6255002 None:intergenic 40.0%
CTTCCACATTGGATGAGATT+AGG + chr1_3:6255007-6255026 Msa0099900:intron 40.0%
TTAGAACTTGAGGCAATCCT+AGG - chr1_3:6255071-6255090 None:intergenic 40.0%
AGAGCCTATTCAAGGTCTAT+TGG + chr1_3:6255100-6255119 Msa0099900:intron 40.0%
GAGCCTATTCAAGGTCTATT+GGG + chr1_3:6255101-6255120 Msa0099900:intron 40.0%
! CACGCTCTAGATTTGACAAA+TGG - chr1_3:6255164-6255183 None:intergenic 40.0%
! TTGTCAAATCTAGAGCGTGA+AGG + chr1_3:6255165-6255184 Msa0099900:intron 40.0%
! TGTCAAATCTAGAGCGTGAA+GGG + chr1_3:6255166-6255185 Msa0099900:intron 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG + chr1_3:6255270-6255289 Msa0099900:intron 40.0%
!!! TCTTCGCATTTTGAGGTCAA+GGG + chr1_3:6255567-6255586 Msa0099900:CDS 40.0%
CTATTGGCAACATCTGTAGT+TGG - chr1_3:6255776-6255795 None:intergenic 40.0%
CAACTACAGATGTTGCCAAT+AGG + chr1_3:6255774-6255793 Msa0099900:CDS 40.0%
TAAAGGAAGGTCTAACAGGT+AGG - chr1_3:6255844-6255863 None:intergenic 40.0%
! CGAACAGGCTTTATAAAGGA+AGG - chr1_3:6255857-6255876 None:intergenic 40.0%
TCAAGAACATGGCATACCTT+TGG - chr1_3:6255881-6255900 None:intergenic 40.0%
ATCAAGTCTGATCTCTCACT+AGG - chr1_3:6256258-6256277 None:intergenic 40.0%
! ATATGATTGTTCATGGCGGA+TGG + chr1_3:6256295-6256314 Msa0099900:intron 40.0%
GCAGATACCAATCAAACACA+TGG - chr1_3:6256645-6256664 None:intergenic 40.0%
GATTGTCGAGCTTCTCTAAT+AGG + chr1_3:6256743-6256762 Msa0099900:intron 40.0%
ACTAAGGAGAGATTTAGGGA+TGG + chr1_3:6256770-6256789 Msa0099900:CDS 40.0%
TCCTGCTGTATTATTGATGG+GGG + chr1_3:6256803-6256822 Msa0099900:CDS 40.0%
ATCACAAGAATCTGACCTGT+GGG - chr1_3:6256900-6256919 None:intergenic 40.0%
TGATTGGAAGATTCCAGTGA+AGG + chr1_3:6256962-6256981 Msa0099900:CDS 40.0%
TGATACACTAATTGTTCCGG+CGG + chr1_3:6256988-6257007 Msa0099900:intron 40.0%
TCAAGTAAAATCACATCCGC+CGG - chr1_3:6257007-6257026 None:intergenic 40.0%
! ATACTCTTATTTGGGACGGT+GGG - chr1_3:6257212-6257231 None:intergenic 40.0%
! AATACTCTTATTTGGGACGG+TGG - chr1_3:6257213-6257232 None:intergenic 40.0%
CTCACACTAGAAACTTTGCT+AGG - chr1_3:6257353-6257372 None:intergenic 40.0%
CTTAAGGTAGAAGATGTCTG+GGG + chr1_3:6257478-6257497 Msa0099900:intron 40.0%
GCCTACAAAAGCAACACAAA+AGG - chr1_3:6257685-6257704 None:intergenic 40.0%
!!! TTTGTGTTGCTTTTGTAGGC+TGG + chr1_3:6257685-6257704 Msa0099900:intron 40.0%
! CACTGGTTAAATTTAGGCTG+AGG + chr1_3:6258058-6258077 Msa0099900:intron 40.0%
GCTGAGGTTTCATACATAAG+TGG + chr1_3:6258074-6258093 Msa0099900:intron 40.0%
! TTCCTTTGATTTCAGGAAGC+TGG + chr1_3:6258219-6258238 Msa0099900:intron 40.0%
GGAGATAGCGAAAATTGTTG+CGG + chr1_3:6258296-6258315 Msa0099900:CDS 40.0%
!! AAAATTGTTGCGGACTGGTT+TGG + chr1_3:6258306-6258325 Msa0099900:CDS 40.0%
!!! GCTTTTAGTTCATCGGCTTT+TGG - chr1_3:6258333-6258352 None:intergenic 40.0%
TGCATTAAAACTAGCAAGGC+CGG + chr1_3:6258365-6258384 Msa0099900:CDS 40.0%
GTACAGCTTAATCAACACTG+AGG + chr1_3:6258460-6258479 Msa0099900:exon 40.0%
! TCTTTTGTAACACGCGTAGC+TGG - chr1_3:6252949-6252968 None:intergenic 45.0%
! GCGGTGGTGGTTATAAGTTT+AGG + chr1_3:6253154-6253173 Msa0099900:five_prime_UTR 45.0%
CTGTTAGGGTTCATTGTGAG+AGG + chr1_3:6253202-6253221 Msa0099900:five_prime_UTR 45.0%
CATTGTGAGAGGATTCCGAT+TGG + chr1_3:6253213-6253232 Msa0099900:five_prime_UTR 45.0%
!! GGAATGGTGTTGGTGGAAAT+GGG + chr1_3:6253289-6253308 Msa0099900:five_prime_UTR 45.0%
! GTGTTGGTGGAAATGGGAAT+GGG + chr1_3:6253295-6253314 Msa0099900:five_prime_UTR 45.0%
!! GAAATGGGAATGGGTTGATG+TGG + chr1_3:6253304-6253323 Msa0099900:five_prime_UTR 45.0%
!! TGGGTTGATGTGGAAGATGA+AGG + chr1_3:6253314-6253333 Msa0099900:five_prime_UTR 45.0%
GAAGGATTGGGATTGAAGAG+TGG + chr1_3:6253332-6253351 Msa0099900:five_prime_UTR 45.0%
ATTGGGATTGAAGAGTGGTG+AGG + chr1_3:6253337-6253356 Msa0099900:five_prime_UTR 45.0%
TTGGGATTGAAGAGTGGTGA+GGG + chr1_3:6253338-6253357 Msa0099900:five_prime_UTR 45.0%
TGAGGGGAAGAAAGTGAAGA+AGG + chr1_3:6253355-6253374 Msa0099900:five_prime_UTR 45.0%
TTGATGAGTGATACTGGTGG+TGG + chr1_3:6253386-6253405 Msa0099900:exon 45.0%
TGACACTGACACGTTGATAC+TGG + chr1_3:6253538-6253557 Msa0099900:intron 45.0%
CGCAAGACAGGATATAGTGT+TGG + chr1_3:6253643-6253662 Msa0099900:CDS 45.0%
AGTTGCCAACTTCACTGTAG+AGG - chr1_3:6253964-6253983 None:intergenic 45.0%
GGAATTTGATTGAACGGCCA+AGG - chr1_3:6254365-6254384 None:intergenic 45.0%
TAGTAGGTCATCCTCCACAA+CGG - chr1_3:6254419-6254438 None:intergenic 45.0%
TTGTGGAGGATGACCTACTA+TGG + chr1_3:6254419-6254438 Msa0099900:CDS 45.0%
GAGGATGACCTACTATGGAA+CGG + chr1_3:6254424-6254443 Msa0099900:CDS 45.0%
TTGACTGATGAACCAGACGT+GGG - chr1_3:6254451-6254470 None:intergenic 45.0%
TTTGACTGATGAACCAGACG+TGG - chr1_3:6254452-6254471 None:intergenic 45.0%
GAACTGGATTTCTCTAGTGG+TGG + chr1_3:6254743-6254762 Msa0099900:intron 45.0%
AAAATGACCGCACGGTAACT+TGG + chr1_3:6254881-6254900 Msa0099900:intron 45.0%
TGGCAATATTCAGCACGGTT+CGG + chr1_3:6254901-6254920 Msa0099900:intron 45.0%
GTTGCAATGTGCTTCCACAT+TGG + chr1_3:6254996-6255015 Msa0099900:intron 45.0%
TGGCCCAATAGACCTTGAAT+AGG - chr1_3:6255107-6255126 None:intergenic 45.0%
CTATCATGTCTCCCACTACT+GGG + chr1_3:6255131-6255150 Msa0099900:intron 45.0%
GTTTGTCAAGAGTCCCACAT+TGG + chr1_3:6255190-6255209 Msa0099900:intron 45.0%
! ACGTTCCTCTTCGCATTTTG+AGG + chr1_3:6255560-6255579 Msa0099900:CDS 45.0%
CTTGACCTCAAAATGCGAAG+AGG - chr1_3:6255568-6255587 None:intergenic 45.0%
!!! CTCTTCGCATTTTGAGGTCA+AGG + chr1_3:6255566-6255585 Msa0099900:CDS 45.0%
!!! CTTCGCATTTTGAGGTCAAG+GGG + chr1_3:6255568-6255587 Msa0099900:CDS 45.0%
TCCAGCTTTCATTGCCCTAT+TGG - chr1_3:6255792-6255811 None:intergenic 45.0%
! TGGCCGAACAGGCTTTATAA+AGG - chr1_3:6255861-6255880 None:intergenic 45.0%
TATAAAGCCTGTTCGGCCAA+AGG + chr1_3:6255862-6255881 Msa0099900:CDS 45.0%
AGTCTGATCTCTCACTAGGT+GGG - chr1_3:6256254-6256273 None:intergenic 45.0%
AAGTCTGATCTCTCACTAGG+TGG - chr1_3:6256255-6256274 None:intergenic 45.0%
TGGTATCTGCTTTCGCTGAT+TGG + chr1_3:6256655-6256674 Msa0099900:intron 45.0%
GAGAGATTTAGGGATGGATG+AGG + chr1_3:6256776-6256795 Msa0099900:CDS 45.0%
CCTGCTGTATTATTGATGGG+GGG + chr1_3:6256804-6256823 Msa0099900:CDS 45.0%
GATCACAAGAATCTGACCTG+TGG - chr1_3:6256901-6256920 None:intergenic 45.0%
GGTCAGATTCTTGTGATCTG+TGG + chr1_3:6256903-6256922 Msa0099900:CDS 45.0%
AAGGTTGGATCTCATTGTCG+CGG + chr1_3:6257619-6257638 Msa0099900:intron 45.0%
AAATGATTACATTGCCGGGC+AGG + chr1_3:6257756-6257775 Msa0099900:CDS 45.0%
ATCATGACAAGGTCGAGGAA+TGG - chr1_3:6257802-6257821 None:intergenic 45.0%
GCTATGGCAGTAGAGCATAT+AGG - chr1_3:6258025-6258044 None:intergenic 45.0%
TGCCAGCTTCCTGAAATCAA+AGG - chr1_3:6258224-6258243 None:intergenic 45.0%
TAGCGAAAATTGTTGCGGAC+TGG + chr1_3:6258301-6258320 Msa0099900:CDS 45.0%
TTACTAGCTCGTGCATGTCA+TGG - chr1_3:6258410-6258429 None:intergenic 45.0%
AATGTGAAAGGCAGCAAAGG+TGG + chr1_3:6258512-6258531 Msa0099900:three_prime_UTR 45.0%
CTTCAACAACCTCACACGTG+TGG + chr1_3:6253089-6253108 Msa0099900:five_prime_UTR 50.0%
! ATGATGATGCCACACGTGTG+AGG - chr1_3:6253101-6253120 None:intergenic 50.0%
!! GGGAATGGTGTTGGTGGAAA+TGG + chr1_3:6253288-6253307 Msa0099900:five_prime_UTR 50.0%
!! GGTGTTGGTGGAAATGGGAA+TGG + chr1_3:6253294-6253313 Msa0099900:five_prime_UTR 50.0%
TGGGATTGAAGAGTGGTGAG+GGG + chr1_3:6253339-6253358 Msa0099900:five_prime_UTR 50.0%
ATGTGTCTGAACCGCAAGAC+AGG + chr1_3:6253631-6253650 Msa0099900:CDS 50.0%
AGCTGCCTCTACAGTGAAGT+TGG + chr1_3:6253956-6253975 Msa0099900:intron 50.0%
TATGGTCTGAGCACACACCT+TGG + chr1_3:6254345-6254364 Msa0099900:CDS 50.0%
TGGTGAAACATGGACCGTTG+TGG + chr1_3:6254402-6254421 Msa0099900:CDS 50.0%
TGAAACATGGACCGTTGTGG+AGG + chr1_3:6254405-6254424 Msa0099900:CDS 50.0%
TGACTGATGAACCAGACGTG+GGG - chr1_3:6254450-6254469 None:intergenic 50.0%
! TGGAAGCACATTGCAACTGC+AGG - chr1_3:6254993-6255012 None:intergenic 50.0%
GGGCCTAATCTCATCCAATG+TGG - chr1_3:6255013-6255032 None:intergenic 50.0%
TGTGGAAGGAAGGCTTACCT+AGG + chr1_3:6255051-6255070 Msa0099900:intron 50.0%
! GTAGTGGGAGACATGATAGC+TGG - chr1_3:6255130-6255149 None:intergenic 50.0%
GCTATCATGTCTCCCACTAC+TGG + chr1_3:6255130-6255149 Msa0099900:intron 50.0%
!! CCTTACAAAACCGGCTTGCA+AGG - chr1_3:6255263-6255282 None:intergenic 50.0%
!! CCTTGCAAGCCGGTTTTGTA+AGG + chr1_3:6255260-6255279 Msa0099900:intron 50.0%
AGAGGAACGTGTTGCATCAG+TGG - chr1_3:6255550-6255569 None:intergenic 50.0%
TGAGCACATGCCATCCAACA+TGG + chr1_3:6255632-6255651 Msa0099900:CDS 50.0%
GCCAATAGGGCAATGAAAGC+TGG + chr1_3:6255788-6255807 Msa0099900:CDS 50.0%
CCCCCCATCAATAATACAGC+AGG - chr1_3:6256807-6256826 None:intergenic 50.0%
GCTGTATTATTGATGGGGGG+AGG + chr1_3:6256807-6256826 Msa0099900:CDS 50.0%
TTATTGATGGGGGGAGGTGA+AGG + chr1_3:6256813-6256832 Msa0099900:CDS 50.0%
GTCCCATTGAAGCTACTGCT+CGG + chr1_3:6256841-6256860 Msa0099900:CDS 50.0%
TCCCATTGAAGCTACTGCTC+GGG + chr1_3:6256842-6256861 Msa0099900:CDS 50.0%
ATTGCAGAGGCCATGATTCG+AGG + chr1_3:6257718-6257737 Msa0099900:CDS 50.0%
AATAGGCAGGCCTCGAATCA+TGG - chr1_3:6257731-6257750 None:intergenic 50.0%
TGAGAACCACATTACCTGCC+CGG - chr1_3:6257773-6257792 None:intergenic 50.0%
TCCGATTGGATTCGCTTCGC+TGG + chr1_3:6253227-6253246 Msa0099900:five_prime_UTR 55.0%
CCCAGCGAAGCGAATCCAAT+CGG - chr1_3:6253231-6253250 None:intergenic 55.0%
CCGATTGGATTCGCTTCGCT+GGG + chr1_3:6253228-6253247 Msa0099900:five_prime_UTR 55.0%
!! GCTTCGCTGGGAGTTGATGA+CGG + chr1_3:6253240-6253259 Msa0099900:five_prime_UTR 55.0%
TGGTCATCGTGCTTCTGCTG+AGG + chr1_3:6253406-6253425 Msa0099900:CDS 55.0%
GTGGGAGACATGATAGCTGG+TGG - chr1_3:6255127-6255146 None:intergenic 55.0%
ATGGAGCATGGCCCAGTAGT+GGG - chr1_3:6255145-6255164 None:intergenic 55.0%
AATGGAGCATGGCCCAGTAG+TGG - chr1_3:6255146-6255165 None:intergenic 55.0%
TGGCATACCTTTGGCCGAAC+AGG - chr1_3:6255872-6255891 None:intergenic 55.0%
GCCCGAGCAGTAGCTTCAAT+GGG - chr1_3:6256846-6256865 None:intergenic 55.0%
TGCCCGAGCAGTAGCTTCAA+TGG - chr1_3:6256847-6256866 None:intergenic 55.0%
!! TTGCTTTTGTAGGCTGGCCC+AGG + chr1_3:6257691-6257710 Msa0099900:intron 55.0%
!! TGCTTTTGTAGGCTGGCCCA+GGG + chr1_3:6257692-6257711 Msa0099900:intron 55.0%
TGGCCTCTGCAATTGTCCCT+GGG - chr1_3:6257711-6257730 None:intergenic 55.0%
ATGGCCTCTGCAATTGTCCC+TGG - chr1_3:6257712-6257731 None:intergenic 55.0%
ACATTGCCGGGCAGGTAATG+TGG + chr1_3:6257764-6257783 Msa0099900:intron 55.0%
!! TCGCTGGGAGTTGATGACGG+TGG + chr1_3:6253243-6253262 Msa0099900:five_prime_UTR 60.0%
!! CTGGGAGTTGATGACGGTGG+TGG + chr1_3:6253246-6253265 Msa0099900:five_prime_UTR 60.0%
!! GGAGTTGATGACGGTGGTGG+TGG + chr1_3:6253249-6253268 Msa0099900:five_prime_UTR 60.0%
!! GTTGATGACGGTGGTGGTGG+TGG + chr1_3:6253252-6253271 Msa0099900:five_prime_UTR 60.0%
!! TGGTGGTGGTGTTGGTGGTG+AGG + chr1_3:6253266-6253285 Msa0099900:five_prime_UTR 60.0%
!! GGTGGTGGTGTTGGTGGTGA+GGG + chr1_3:6253267-6253286 Msa0099900:five_prime_UTR 60.0%
!! GTGGTGGTGTTGGTGGTGAG+GGG + chr1_3:6253268-6253287 Msa0099900:five_prime_UTR 60.0%
!! GGTGTTGGTGGTGAGGGGAA+TGG + chr1_3:6253273-6253292 Msa0099900:five_prime_UTR 60.0%
GGTGGTGAGGGGAATGGTGT+TGG + chr1_3:6253279-6253298 Msa0099900:five_prime_UTR 60.0%
! GGTGAGGGGAATGGTGTTGG+TGG + chr1_3:6253282-6253301 Msa0099900:five_prime_UTR 60.0%
ACGTGGGGCCGTTCCATAGT+AGG - chr1_3:6254435-6254454 None:intergenic 60.0%
GCGTCTCTCACCTTGCAAGC+CGG + chr1_3:6255250-6255269 Msa0099900:intron 60.0%
! ATGGGGGGAGGTGAAGGCAT+GGG + chr1_3:6256819-6256838 Msa0099900:CDS 60.0%
GAAGCTACTGCTCGGGCACT+TGG + chr1_3:6256849-6256868 Msa0099900:CDS 60.0%
AATGACGAGGGGGTTCCCAC+AGG + chr1_3:6256882-6256901 Msa0099900:CDS 60.0%
TGGCCCAGGGACAATTGCAG+AGG + chr1_3:6257705-6257724 Msa0099900:CDS 60.0%
!! GACGGTGGTGGTGGTGGTGT+TGG + chr1_3:6253258-6253277 Msa0099900:five_prime_UTR 65.0%
!! GGTGGTGGTGGTGGTGTTGG+TGG + chr1_3:6253261-6253280 Msa0099900:five_prime_UTR 65.0%
CTATGGAACGGCCCCACGTC+TGG + chr1_3:6254436-6254455 Msa0099900:CDS 65.0%
GATGGGGGGAGGTGAAGGCA+TGG + chr1_3:6256818-6256837 Msa0099900:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 6252669 6258633 6252669 ID=Msa0099900;Name=Msa0099900
chr1_3 mRNA 6252669 6258633 6252669 ID=Msa0099900-mRNA-1;Parent=Msa0099900;Name=Msa0099900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=720|0.75|0.88|0.88|1|1|9|163|407
chr1_3 exon 6252669 6253472 6252669 ID=Msa0099900-mRNA-1:exon:2349;Parent=Msa0099900-mRNA-1
chr1_3 exon 6253607 6253675 6253607 ID=Msa0099900-mRNA-1:exon:2350;Parent=Msa0099900-mRNA-1
chr1_3 exon 6254329 6254501 6254329 ID=Msa0099900-mRNA-1:exon:2351;Parent=Msa0099900-mRNA-1
chr1_3 exon 6255492 6255653 6255492 ID=Msa0099900-mRNA-1:exon:2352;Parent=Msa0099900-mRNA-1
chr1_3 exon 6255742 6255883 6255742 ID=Msa0099900-mRNA-1:exon:2353;Parent=Msa0099900-mRNA-1
chr1_3 exon 6256765 6256983 6256765 ID=Msa0099900-mRNA-1:exon:2354;Parent=Msa0099900-mRNA-1
chr1_3 exon 6257559 6257621 6257559 ID=Msa0099900-mRNA-1:exon:2355;Parent=Msa0099900-mRNA-1
chr1_3 exon 6257703 6257777 6257703 ID=Msa0099900-mRNA-1:exon:2356;Parent=Msa0099900-mRNA-1
chr1_3 exon 6258234 6258633 6258234 ID=Msa0099900-mRNA-1:exon:2357;Parent=Msa0099900-mRNA-1
chr1_3 five_prime_UTR 6252669 6253388 6252669 ID=Msa0099900-mRNA-1:five_prime_utr;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6253389 6253472 6253389 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6253607 6253675 6253607 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6254329 6254501 6254329 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6255492 6255653 6255492 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6255742 6255883 6255742 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6256765 6256983 6256765 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6257559 6257621 6257559 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6257703 6257777 6257703 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 CDS 6258234 6258470 6258234 ID=Msa0099900-mRNA-1:cds;Parent=Msa0099900-mRNA-1
chr1_3 three_prime_UTR 6258471 6258633 6258471 ID=Msa0099900-mRNA-1:three_prime_utr;Parent=Msa0099900-mRNA-1
Gene Sequence

>Msa0099900

ATGAGTGATACTGGTGGTGGTCATCGTGCTTCTGCTGAGGCGATTAAAGCTGCTTTTTATCAAGAATATGGGGATGATTATCAGTGTTGTATTGTCTTGGATGCTGACATGTGTCTGAACCGCAAGACAGGATATAGTGTTGGTGCTATTGAGGTGTTTATTACCGATTTATGGTCTGAGCACACACCTTGGCCGTTCAATCAAATTCCTAAAAGCTATAGCTTTTTGGTGAAACATGGACCGTTGTGGAGGATGACCTACTATGGAACGGCCCCACGTCTGGTTCATCAGTCAAATTTTGCTGCAACTTCAACATTCATAGCTCGTGAGGTTGCTAAAGGATTAATGAAGTATCAGCCTGATATAATAATCAGTGTGCATCCACTGATGCAACACGTTCCTCTTCGCATTTTGAGGTCAAGGGGTCTTTTAGATAAGATTGTTTTTACCACAGTTATTACAGATTTGAGCACATGCCATCCAACATGGTTTCACAAACTTGTAACTAGATGTTATTGTCCAACTACAGATGTTGCCAATAGGGCAATGAAAGCTGGACTCAAACAAACCCAAATAAAGATTTATGGCCTACCTGTTAGACCTTCCTTTATAAAGCCTGTTCGGCCAAAGGATGAACTAAGGAGAGATTTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGTGAAGGCATGGGTCCCATTGAAGCTACTGCTCGGGCACTTGGAGATTTATTAAATGACGAGGGGGTTCCCACAGGTCAGATTCTTGTGATCTGTGGTCGTAATAAGAAGCTTGCTAACAAACTCAGTTCTATTGATTGGAAGATTCCAGTGAAGGTCATGGGATTCGTTACCAAAATTGAAGAATGCATGGGAGCCTGTGATTGCATTATTACAAAGGCTGGCCCAGGGACAATTGCAGAGGCCATGATTCGAGGCCTGCCTATTATTTTAAATGATTACATTGCCGGGCAGGAAGCTGGCAATGTTCCCTATGTTGTTGAAAATGGTTGTGGAAAGTACTCTAAATTGCCTAAGGAGATAGCGAAAATTGTTGCGGACTGGTTTGGTCCAAAAGCCGATGAACTAAAAGCAATGTCCCAAAATGCATTAAAACTAGCAAGGCCGGATTCTGTGTTCAAAATTGTCCATGACATGCACGAGCTAGTAAAACAGAGAAGCTTATTAACTGAGTATTCTTGTACAGCTTAA
Protein sequence

>Msa0099900

MSDTGGGHRASAEAIKAAFYQEYGDDYQCCIVLDADMCLNRKTGYSVGAIEVFITDLWSEHTPWPFNQIPKSYSFLVKHGPLWRMTYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSRGLLDKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVANRAMKAGLKQTQIKIYGLPVRPSFIKPVRPKDELRRDLGMDEDLPAVLLMGGGEGMGPIEATARALGDLLNDEGVPTGQILVICGRNKKLANKLSSIDWKIPVKVMGFVTKIEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKYSKLPKEIAKIVADWFGPKADELKAMSQNALKLARPDSVFKIVHDMHELVKQRSLLTEYSCTA*