Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454750 | sp|Q9FZL4|MGDG_SOYBN | 76.592 | 534 | 111 | 6 | 8 | 535 | 5 | 530 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454750 | A0A396GED1 | 95.725 | 538 | 20 | 1 | 1 | 535 | 1 | 538 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1454750 | -0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa0024680 | Msa1454750 | 0.800551 | 1.366855e-48 | -8.615850e-47 |
| Msa0030000 | Msa1454750 | 0.806318 | 8.719893e-50 | -8.615850e-47 |
| Msa0099900 | Msa1454750 | 0.898926 | 3.285224e-77 | -8.615850e-47 |
| Msa0099930 | Msa1454750 | 0.836788 | 7.619619e-57 | -8.615850e-47 |
| Msa1360890 | Msa1454750 | -0.805234 | 1.473084e-49 | -8.615850e-47 |
| Msa1367940 | Msa1454750 | 0.809235 | 2.091805e-50 | -8.615850e-47 |
| Msa1368180 | Msa1454750 | 0.831230 | 1.877692e-55 | -8.615850e-47 |
| Msa1373510 | Msa1454750 | 0.817663 | 2.933589e-52 | -8.615850e-47 |
| Msa1376640 | Msa1454750 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa1381130 | Msa1454750 | 0.816110 | 6.548947e-52 | -8.615850e-47 |
| Msa1385580 | Msa1454750 | 0.814880 | 1.229775e-51 | -8.615850e-47 |
| Msa1404720 | Msa1454750 | 0.815112 | 1.092460e-51 | -8.615850e-47 |
| Msa1442220 | Msa1454750 | -0.822166 | 2.739547e-53 | -8.615850e-47 |
| Msa0609970 | Msa1454750 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0650620 | Msa1454750 | 0.802652 | 5.068339e-49 | -8.615850e-47 |
| Msa0650650 | Msa1454750 | 0.811835 | 5.739875e-51 | -8.615850e-47 |
| Msa0650740 | Msa1454750 | 0.814586 | 1.428630e-51 | -8.615850e-47 |
| Msa0681890 | Msa1454750 | 0.811458 | 6.931021e-51 | -8.615850e-47 |
| Msa0138970 | Msa1454750 | -0.819136 | 1.360964e-52 | -8.615850e-47 |
| Msa0145950 | Msa1454750 | 0.805624 | 1.220049e-49 | -8.615850e-47 |
| Msa0185390 | Msa1454750 | 0.815778 | 7.764291e-52 | -8.615850e-47 |
| Msa0227510 | Msa1454750 | 0.819496 | 1.126551e-52 | -8.615850e-47 |
| Msa0236980 | Msa1454750 | 0.801348 | 9.394372e-49 | -8.615850e-47 |
| Msa1236070 | Msa1454750 | -0.800389 | 1.474940e-48 | -8.615850e-47 |
| Msa1300860 | Msa1454750 | 0.808529 | 2.962296e-50 | -8.615850e-47 |
| Msa1327760 | Msa1454750 | 0.803542 | 3.317537e-49 | -8.615850e-47 |
| Msa0413200 | Msa1454750 | 0.810255 | 1.262092e-50 | -8.615850e-47 |
| Msa0469910 | Msa1454750 | -0.821847 | 3.247165e-53 | -8.615850e-47 |
| Msa0471790 | Msa1454750 | 0.807278 | 5.464832e-50 | -8.615850e-47 |
| Msa0482680 | Msa1454750 | 0.802313 | 5.954114e-49 | -8.615850e-47 |
| Msa0993530 | Msa1454750 | 0.809304 | 2.021293e-50 | -8.615850e-47 |
| Msa1000470 | Msa1454750 | 0.807665 | 4.524815e-50 | -8.615850e-47 |
| Msa1030280 | Msa1454750 | 0.802310 | 5.962341e-49 | -8.615850e-47 |
| Msa1092820 | Msa1454750 | 0.811307 | 7.475102e-51 | -8.615850e-47 |
| Msa0275400 | Msa1454750 | -0.816796 | 4.598196e-52 | -8.615850e-47 |
| Msa0328210 | Msa1454750 | 0.809807 | 1.576816e-50 | -8.615850e-47 |
| Msa1119720 | Msa1454750 | 0.830956 | 2.192751e-55 | -8.615850e-47 |
| Msa1157920 | Msa1454750 | 0.804925 | 1.709167e-49 | -8.615850e-47 |
| Msa0522120 | Msa1454750 | 0.800411 | 1.459514e-48 | -8.615850e-47 |
| Msa0575990 | Msa1454750 | -0.801431 | 9.031606e-49 | -8.615850e-47 |
| Msa0576100 | Msa1454750 | -0.801767 | 7.710190e-49 | -8.615850e-47 |
| Msa0579340 | Msa1454750 | 0.819987 | 8.702107e-53 | -8.615850e-47 |
| Msa0852730 | Msa1454750 | 0.801102 | 1.055122e-48 | -8.615850e-47 |
| Msa0926860 | Msa1454750 | 0.803996 | 2.670208e-49 | -8.615850e-47 |
| Msa0958020 | Msa1454750 | 0.812803 | 3.527110e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454750 | MtrunA17_Chr8g0347051 | 95.725 | 538 | 20 | 1 | 1 | 535 | 1 | 538 | 0.0 | 988 |
| Msa1454750 | MtrunA17_Chr1g0150361 | 95.000 | 540 | 21 | 2 | 1 | 535 | 1 | 539 | 0.0 | 979 |
| Msa1454750 | MtrunA17_Chr4g0064711 | 60.914 | 394 | 152 | 1 | 134 | 525 | 57 | 450 | 9.63e-171 | 491 |
| Msa1454750 | MtrunA17_Chr8g0347041 | 96.262 | 107 | 4 | 0 | 116 | 222 | 72 | 178 | 1.87e-69 | 223 |
| Msa1454750 | MtrunA17_Chr8g0347341 | 95.604 | 91 | 4 | 0 | 132 | 222 | 88 | 178 | 4.83e-56 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454750 | AT4G31780.2 | 68.635 | 542 | 154 | 7 | 1 | 535 | 1 | 533 | 0.0 | 734 |
| Msa1454750 | AT4G31780.3 | 65.493 | 568 | 154 | 8 | 1 | 535 | 1 | 559 | 0.0 | 719 |
| Msa1454750 | AT4G31780.1 | 81.894 | 359 | 63 | 1 | 179 | 535 | 8 | 366 | 0.0 | 617 |
| Msa1454750 | AT2G11810.1 | 58.637 | 411 | 163 | 3 | 129 | 532 | 54 | 464 | 2.48e-171 | 493 |
| Msa1454750 | AT5G20410.1 | 59.259 | 405 | 162 | 2 | 131 | 532 | 53 | 457 | 1.04e-167 | 483 |
| Msa1454750 | AT2G11810.4 | 59.882 | 339 | 131 | 2 | 199 | 532 | 3 | 341 | 5.62e-142 | 413 |
| Msa1454750 | AT2G11810.2 | 56.818 | 308 | 129 | 2 | 129 | 432 | 54 | 361 | 3.69e-121 | 361 |
| Msa1454750 | AT2G11810.3 | 56.452 | 310 | 131 | 2 | 129 | 434 | 54 | 363 | 3.85e-121 | 361 |
Find 146 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATAAAATTAATAATTT+TGG | 0.100623 | tig0035425:-641 | Msa1454750:three_prime_UTR |
| TCCCATGCATTCTTCAATTT+TGG | 0.143640 | tig0035425:+1677 | Msa1454750:intergenic |
| GTAGGCCATAAATCTTTATT+TGG | 0.144917 | tig0035425:+3429 | Msa1454750:intergenic |
| GATGAACTAAGGAGAGATTT+AGG | 0.146974 | tig0035425:-2488 | Msa1454750:CDS |
| AGGTGTTTATTACCGATTTA+TGG | 0.217636 | tig0035425:-4962 | Msa1454750:CDS |
| GTTCCCTATGTTGTTGAAAA+TGG | 0.232287 | tig0035425:-1005 | Msa1454750:CDS |
| AGTTAGTTATTGTAATAAAA+TGG | 0.238030 | tig0035425:+6421 | Msa1454750:intergenic |
| CAAACCCAAATAAAGATTTA+TGG | 0.240574 | tig0035425:-3434 | Msa1454750:CDS |
| GGGAATGGTGTTGGTGGAAA+TGG | 0.257208 | tig0035425:-6037 | Msa1454750:CDS |
| GGTTGAAGAGGTTAAGGTTT+TGG | 0.268173 | tig0035425:+6484 | Msa1454750:intergenic |
| GTAATAAAATGGAATATAAA+TGG | 0.278091 | tig0035425:+6432 | Msa1454750:intergenic |
| GGTGGTGGTGTTGGTGGTGA+GGG | 0.289092 | tig0035425:-6058 | Msa1454750:CDS |
| TGGTGGTGGTGTTGGTGGTG+AGG | 0.295208 | tig0035425:-6059 | Msa1454750:CDS |
| TCCAGCTTTCATTGCCCTAT+TGG | 0.320907 | tig0035425:+3463 | Msa1454750:intergenic |
| TCCGATTGGATTCGCTTCGC+TGG | 0.325021 | tig0035425:-6098 | Msa1454750:CDS |
| GTGAACATGCTTCTGAAGTT+AGG | 0.332228 | tig0035425:+6287 | Msa1454750:intergenic |
| ACTAAACATTAATATCAAAT+TGG | 0.334470 | tig0035425:+682 | Msa1454750:intergenic |
| ATGAACTAAGGAGAGATTTA+GGG | 0.343617 | tig0035425:-2487 | Msa1454750:CDS |
| ATGTAATCATTTAAAATAAT+AGG | 0.345699 | tig0035425:+1506 | Msa1454750:intergenic |
| ACAAACTCAGTTCTATTGAT+TGG | 0.345962 | tig0035425:-2307 | Msa1454750:CDS |
| ATGGCCTCTGCAATTGTCCC+TGG | 0.362907 | tig0035425:+1542 | Msa1454750:intergenic |
| AGAATACGGGGATAATTATC+AGG | 0.364805 | tig0035425:-5873 | Msa1454750:intron |
| AAAATTGTTGCGGACTGGTT+TGG | 0.366157 | tig0035425:-945 | Msa1454750:CDS |
| TAATGAGGTTGAAGAGGTTA+AGG | 0.368271 | tig0035425:+6478 | Msa1454750:intergenic |
| TGCACACTGATTATTATATC+AGG | 0.373255 | tig0035425:+3729 | Msa1454750:intergenic |
| TAGGCCATAAATCTTTATTT+GGG | 0.377476 | tig0035425:+3430 | Msa1454750:intergenic |
| TCTTCCTGCTGTATTATTGA+TGG | 0.378039 | tig0035425:-2453 | Msa1454750:CDS |
| TGGCATACCTTTGGCCGAAC+AGG | 0.379500 | tig0035425:+3383 | Msa1454750:intergenic |
| TTTATAAAGGAAGGTCTAAC+AGG | 0.381701 | tig0035425:+3407 | Msa1454750:intergenic |
| CAACTACAGATGTTGCCAAT+AGG | 0.385092 | tig0035425:-3478 | Msa1454750:CDS |
| GTGGTGGTGTTGGTGGTGAG+GGG | 0.391464 | tig0035425:-6057 | Msa1454750:CDS |
| CTTCCTGCTGTATTATTGAT+GGG | 0.393576 | tig0035425:-2452 | Msa1454750:CDS |
| GGTGGTGAGGGGAATGGTGT+TGG | 0.397626 | tig0035425:-6046 | Msa1454750:CDS |
| GGTGTTGGTGGTGAGGGGAA+TGG | 0.402477 | tig0035425:-6052 | Msa1454750:CDS |
| GTTGATGACGGTGGTGGTGG+TGG | 0.406284 | tig0035425:-6073 | Msa1454750:CDS |
| TTTGAATTAGGTTCACGAAT+TGG | 0.407713 | tig0035425:-6343 | Msa1454750:CDS |
| TTCCTTTGATTTCAGGAAGC+TGG | 0.409802 | tig0035425:-1032 | Msa1454750:intron |
| GCGGTGGTGGTTATAAGTTT+AGG | 0.412585 | tig0035425:-6171 | Msa1454750:CDS |
| GGAATGGTGTTGGTGGAAAT+GGG | 0.413937 | tig0035425:-6036 | Msa1454750:CDS |
| TGGCCGAACAGGCTTTATAA+AGG | 0.422561 | tig0035425:+3394 | Msa1454750:intergenic |
| GTGTTGGTGGAAATGGGAAT+GGG | 0.429746 | tig0035425:-6030 | Msa1454750:CDS |
| TTGTGGAGGATGACCTACTA+TGG | 0.432904 | tig0035425:-4870 | Msa1454750:CDS |
| GGTGGAAATGGGAATGGGGT+TGG | 0.437551 | tig0035425:-6025 | Msa1454750:CDS |
| GGAGTTGATGACGGTGGTGG+TGG | 0.440641 | tig0035425:-6076 | Msa1454750:CDS |
| CCGATTGGATTCGCTTCGCT+GGG | 0.440816 | tig0035425:-6097 | Msa1454750:CDS |
| AACTACAGATGTTGCCAATA+GGG | 0.444447 | tig0035425:-3477 | Msa1454750:CDS |
| CTATGGAACTGCCCCACGTC+TGG | 0.449733 | tig0035425:-4853 | Msa1454750:CDS |
| CTTCCTTTATAAAGCCTGTT+CGG | 0.450461 | tig0035425:-3397 | Msa1454750:CDS |
| AAATGATTACATTGCCGGGC+AGG | 0.456227 | tig0035425:-1495 | Msa1454750:intron |
| TTGGGATTGAAGAGTGGTGA+GGG | 0.460128 | tig0035425:-5986 | Msa1454750:CDS |
| GAGTTGAGTTGAGTTGAGTT+GGG | 0.461490 | tig0035425:+6621 | Msa1454750:intergenic |
| TGCATTAAAACTAGCAAGGC+CGG | 0.462786 | tig0035425:-886 | Msa1454750:CDS |
| TGAGTTGAGTTGAGTTGAGT+TGG | 0.466063 | tig0035425:+6620 | Msa1454750:intergenic |
| GCCAATAGGGCAATGAAAGC+TGG | 0.467418 | tig0035425:-3464 | Msa1454750:CDS |
| TGCCCGAGCAGTAGCTTCAA+TGG | 0.468895 | tig0035425:+2409 | Msa1454750:intergenic |
| TAGTGTATCAATACCTTCAC+TGG | 0.470804 | tig0035425:+2278 | Msa1454750:intergenic |
| GGTGAGGGGAATGGTGTTGG+TGG | 0.474033 | tig0035425:-6043 | Msa1454750:CDS |
| AATAGGCAGGCCTCGAATCA+TGG | 0.478545 | tig0035425:+1523 | Msa1454750:intergenic |
| GAAGCTACTGCTCGGGCACT+TGG | 0.480129 | tig0035425:-2404 | Msa1454750:CDS |
| CCCAGCGAAGCGAATCCAAT+CGG | 0.484023 | tig0035425:+6097 | Msa1454750:intergenic |
| TAATTAGAAAGAAGTGAAGC+TGG | 0.489003 | tig0035425:+6265 | Msa1454750:intergenic |
| TACCAAAATTGAAGAATGCA+TGG | 0.490489 | tig0035425:-1679 | Msa1454750:CDS |
| TGGCCTCTGCAATTGTCCCT+GGG | 0.498243 | tig0035425:+1543 | Msa1454750:intergenic |
| GAGAGATTTAGGGATGGATG+AGG | 0.498586 | tig0035425:-2477 | Msa1454750:CDS |
| TTCATTCATCGGAGAAAATG+AGG | 0.501011 | tig0035425:+6519 | Msa1454750:intergenic |
| TTCCTGCTGTATTATTGATG+GGG | 0.501628 | tig0035425:-2451 | Msa1454750:CDS |
| AAATGGGAATGGGGTTGGTG+TGG | 0.501765 | tig0035425:-6020 | Msa1454750:CDS |
| GGTGTTGGTGGAAATGGGAA+TGG | 0.504989 | tig0035425:-6031 | Msa1454750:CDS |
| TCCCATTGAAGCTACTGCTC+GGG | 0.505735 | tig0035425:-2411 | Msa1454750:CDS |
| TTCTCTAATAGGATGAACTA+AGG | 0.511639 | tig0035425:-2499 | Msa1454750:intron |
| AGTTTAAACAATAGCGGTGG+TGG | 0.514164 | tig0035425:-6184 | Msa1454750:CDS |
| GCCCGAGCAGTAGCTTCAAT+GGG | 0.516727 | tig0035425:+2410 | Msa1454750:intergenic |
| TGGTGTGGAAGATGAAGGAT+TGG | 0.524269 | tig0035425:-6005 | Msa1454750:CDS |
| TAGCGAAAATTGTTGCGGAC+TGG | 0.524664 | tig0035425:-950 | Msa1454750:CDS |
| CTATTGGCAACATCTGTAGT+TGG | 0.528409 | tig0035425:+3479 | Msa1454750:intergenic |
| TGAGGGGAAGAAAGTGAAGA+AGG | 0.529010 | tig0035425:-5969 | Msa1454750:CDS |
| CTGTTAGGGTTCATTGTGAG+AGG | 0.529931 | tig0035425:-6123 | Msa1454750:CDS |
| ACGTGGGGCAGTTCCATAGT+AGG | 0.529946 | tig0035425:+4857 | Msa1454750:intergenic |
| GGGGTTGGTGTGGAAGATGA+AGG | 0.530487 | tig0035425:-6010 | Msa1454750:CDS |
| AAACATTAATATCAAATTGG+TGG | 0.532083 | tig0035425:+685 | Msa1454750:intergenic |
| TATGTTGTTGAAAATGGTTG+TGG | 0.536014 | tig0035425:-999 | Msa1454750:CDS |
| ATTGTTTAAACTGAGTGAAA+CGG | 0.538925 | tig0035425:+6195 | Msa1454750:intergenic |
| GTGTGAGGTTGTTGAAGTAA+AGG | 0.540601 | tig0035425:+6242 | Msa1454750:intergenic |
| CTGGGAGTTGATGACGGTGG+TGG | 0.541803 | tig0035425:-6079 | Msa1454750:CDS |
| TATAAAGCCTGTTCGGCCAA+AGG | 0.541804 | tig0035425:-3390 | Msa1454750:intron |
| GGTGTGGAAGATGAAGGATT+GGG | 0.541858 | tig0035425:-6004 | Msa1454750:CDS |
| GTCCCATTGAAGCTACTGCT+CGG | 0.543348 | tig0035425:-2412 | Msa1454750:CDS |
| TTACTAGCTCGTGCATGTCA+TGG | 0.545685 | tig0035425:+844 | Msa1454750:intergenic |
| AAAGTACTCTAAATTGCCTA+AGG | 0.546044 | tig0035425:-976 | Msa1454750:CDS |
| AGAGGAACGTGTTGCATCAG+TGG | 0.547034 | tig0035425:+3705 | Msa1454750:intergenic |
| TGTTTGTTTGTTTATTGCAG+AGG | 0.547926 | tig0035425:+6559 | Msa1454750:intergenic |
| TCCTGCTGTATTATTGATGG+GGG | 0.548155 | tig0035425:-2450 | Msa1454750:CDS |
| TGTTGGTGGAAATGGGAATG+GGG | 0.551450 | tig0035425:-6029 | Msa1454750:CDS |
| CTTTGTAATAATGCAATCAC+AGG | 0.552893 | tig0035425:+1653 | Msa1454750:intergenic |
| TTTGTGTAATGAGGTTGAAG+AGG | 0.554343 | tig0035425:+6472 | Msa1454750:intergenic |
| CTGTGATTGCATTATTACAA+AGG | 0.560129 | tig0035425:-1652 | Msa1454750:intron |
| TGTGTGCTCAGACCATAAAT+CGG | 0.560704 | tig0035425:+4950 | Msa1454750:intergenic |
| GGAATTTGATTGAACGGCCA+AGG | 0.560974 | tig0035425:+4927 | Msa1454750:intergenic |
| CAACTTCAACATTCATAGCT+CGG | 0.561242 | tig0035425:-4809 | Msa1454750:intron |
| GCTTCGCTGGGAGTTGATGA+CGG | 0.562992 | tig0035425:-6085 | Msa1454750:CDS |
| ATTGCAGAGGCCATGATTCG+AGG | 0.563068 | tig0035425:-1533 | Msa1454750:CDS |
| AATCATTTAAAATAATAGGC+AGG | 0.569875 | tig0035425:+1510 | Msa1454750:intergenic |
| CATTGTGAGAGGATTCCGAT+TGG | 0.571847 | tig0035425:-6112 | Msa1454750:CDS |
| GGAGATTTATTAAATGACGA+GGG | 0.574821 | tig0035425:-2383 | Msa1454750:CDS |
| AGTGAAATGTGTTCATTCAT+CGG | 0.575172 | tig0035425:+6508 | Msa1454750:intergenic |
| CGAACAGGCTTTATAAAGGA+AGG | 0.575344 | tig0035425:+3398 | Msa1454750:intergenic |
| CAGAACTAAACTAACCATGT+TGG | 0.579591 | tig0035425:+3606 | Msa1454750:intergenic |
| TGAGAACCACATTACCTGCC+CGG | 0.584401 | tig0035425:+1481 | Msa1454750:intergenic |
| ATCACAAGAATCTGACCTGT+GGG | 0.585615 | tig0035425:+2356 | Msa1454750:intergenic |
| TGATTGGAAGATTCCAGTGA+AGG | 0.586288 | tig0035425:-2291 | Msa1454750:intron |
| ACTAAACTAACCATGTTGGA+TGG | 0.594783 | tig0035425:+3610 | Msa1454750:intergenic |
| TTGATGAGTGATACTGGTGG+TGG | 0.596075 | tig0035425:-5938 | Msa1454750:CDS |
| TGGGATTGAAGAGTGGTGAG+GGG | 0.596691 | tig0035425:-5985 | Msa1454750:CDS |
| CCTGCTGTATTATTGATGGG+GGG | 0.598824 | tig0035425:-2449 | Msa1454750:CDS |
| TGGTCATCGTGCTTCTGCTG+AGG | 0.600552 | tig0035425:-5918 | Msa1454750:CDS |
| AATGTGAAAGGCAGCAAAGG+TGG | 0.603076 | tig0035425:-739 | Msa1454750:three_prime_UTR |
| ACCAAAATTGAAGAATGCAT+GGG | 0.604354 | tig0035425:-1678 | Msa1454750:CDS |
| TGAGCACATGCCATCCAACA+TGG | 0.607260 | tig0035425:-3620 | Msa1454750:intron |
| TAAAGGAAGGTCTAACAGGT+AGG | 0.611675 | tig0035425:+3411 | Msa1454750:intergenic |
| GGTCAGATTCTTGTGATCTG+TGG | 0.618567 | tig0035425:-2350 | Msa1454750:CDS |
| AAAATGCATTAAAACTAGCA+AGG | 0.621362 | tig0035425:-890 | Msa1454750:CDS |
| TGGCCCAGGGACAATTGCAG+AGG | 0.622682 | tig0035425:-1546 | Msa1454750:CDS |
| TCACTCAGTTTAAACAATAG+CGG | 0.624973 | tig0035425:-6190 | Msa1454750:CDS |
| CTTCAACAACCTCACACGTG+TGG | 0.626249 | tig0035425:-6236 | Msa1454750:CDS |
| CTCAGTTTAAACAATAGCGG+TGG | 0.637662 | tig0035425:-6187 | Msa1454750:CDS |
| ACTAAGGAGAGATTTAGGGA+TGG | 0.645174 | tig0035425:-2483 | Msa1454750:CDS |
| TGGAGATTTATTAAATGACG+AGG | 0.645340 | tig0035425:-2384 | Msa1454750:CDS |
| TTTGACTGATGAACCAGACG+TGG | 0.647032 | tig0035425:+4840 | Msa1454750:intergenic |
| TGGTGAAACATGGACCGTTG+TGG | 0.648644 | tig0035425:-4887 | Msa1454750:CDS |
| TATGGTCTGAGCACACACCT+TGG | 0.651270 | tig0035425:-4944 | Msa1454750:CDS |
| CTTGACCTCAAAATGCGAAG+AGG | 0.652018 | tig0035425:+3687 | Msa1454750:intergenic |
| GAGATTTATTAAATGACGAG+GGG | 0.652249 | tig0035425:-2382 | Msa1454750:CDS |
| TTGACTGATGAACCAGACGT+GGG | 0.652821 | tig0035425:+4841 | Msa1454750:intergenic |
| GGAGATAGCGAAAATTGTTG+CGG | 0.653478 | tig0035425:-955 | Msa1454750:CDS |
| GATCACAAGAATCTGACCTG+TGG | 0.659557 | tig0035425:+2355 | Msa1454750:intergenic |
| AGATTTATTAAATGACGAGG+GGG | 0.661667 | tig0035425:-2381 | Msa1454750:CDS |
| ATTGGGATTGAAGAGTGGTG+AGG | 0.665244 | tig0035425:-5987 | Msa1454750:CDS |
| ATGATGATGCCACACGTGTG+AGG | 0.673938 | tig0035425:+6227 | Msa1454750:intergenic |
| GAAGGATTGGGATTGAAGAG+TGG | 0.674436 | tig0035425:-5992 | Msa1454750:CDS |
| GCTCAAATCTGTAATAACTG+TGG | 0.689167 | tig0035425:+3638 | Msa1454750:intergenic |
| TGAAACATGGACCGTTGTGG+AGG | 0.709765 | tig0035425:-4884 | Msa1454750:CDS |
| TAGTAGGTCATCCTCCACAA+CGG | 0.715366 | tig0035425:+4873 | Msa1454750:intergenic |
| TGACTGATGAACCAGACGTG+GGG | 0.725412 | tig0035425:+4842 | Msa1454750:intergenic |
| TCGCTGGGAGTTGATGACGG+TGG | 0.773048 | tig0035425:-6082 | Msa1454750:CDS |
| TGTTACAAAAGAACCCAATG+CGG | 0.774333 | tig0035425:-6368 | Msa1454750:CDS |
| GTACAGCTTAATCAACACTG+AGG | 0.822600 | tig0035425:-791 | Msa1454750:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAAATTAATAATTT+TGG | - | tig0035425:6655-6674 | Msa1454750:five_prime_UTR | 0.0% |
| !!! | ATTTTTAGGTAAAAAATTTA+GGG | - | tig0035425:1705-1724 | Msa1454750:intron | 10.0% |
| !! | TAATAAATTCATGAATAATT+TGG | - | tig0035425:2183-2202 | Msa1454750:intron | 10.0% |
| !! | TAAATAAATAAATGTTGATA+TGG | - | tig0035425:5545-5564 | Msa1454750:intron | 10.0% |
| !!! | ATGTAATCATTTAAAATAAT+AGG | + | tig0035425:5793-5812 | Msa1454750:intergenic | 10.0% |
| !! | GTAATAAAATGGAATATAAA+TGG | + | tig0035425:867-886 | Msa0453920:intergenic | 15.0% |
| !! | AGTTAGTTATTGTAATAAAA+TGG | + | tig0035425:878-897 | Msa0453920:intergenic | 15.0% |
| !!! | TTATTGTTTTATTGTGTAAT+TGG | - | tig0035425:1463-1482 | Msa1454750:intron | 15.0% |
| !!! | GATTTTTAGGTAAAAAATTT+AGG | - | tig0035425:1704-1723 | Msa1454750:intron | 15.0% |
| !!! | TCTTATTTCTTGTATTTTTT+AGG | - | tig0035425:3764-3783 | Msa1454750:intron | 15.0% |
| !! | AACCTCAAATAATAAATAAA+CGG | + | tig0035425:4212-4231 | Msa1454750:intergenic | 15.0% |
| !! | AAGATATTAAGTGTAAAATA+GGG | + | tig0035425:4377-4396 | Msa1454750:intergenic | 15.0% |
| !!! | CTCAAAATTCAAATTTTTAA+TGG | - | tig0035425:4443-4462 | Msa1454750:intron | 15.0% |
| !! | TCAATTGTTTGATATTTAAT+AGG | - | tig0035425:4479-4498 | Msa1454750:intron | 15.0% |
| !! | TTGGTAAAAACAATAATTTA+GGG | + | tig0035425:5575-5594 | Msa1454750:intergenic | 15.0% |
| !! | ATTGGTAAAAACAATAATTT+AGG | + | tig0035425:5576-5595 | Msa1454750:intergenic | 15.0% |
| !! | ATTAGATACTAGTTAAATTT+AGG | - | tig0035425:6154-6173 | Msa1454750:CDS | 15.0% |
| !! | ACTAAACATTAATATCAAAT+TGG | + | tig0035425:6617-6636 | Msa1454750:intergenic | 15.0% |
| !!! | TTTGTTAATTTTGTGTAATG+AGG | + | tig0035425:836-855 | Msa0453920:intergenic | 20.0% |
| !! | GTAATTAGAGGAATAAAATA+TGG | - | tig0035425:1659-1678 | Msa1454750:CDS | 20.0% |
| !! | ATTATACATATACCATTTGT+AGG | - | tig0035425:2036-2055 | Msa1454750:intron | 20.0% |
| !!! | TTTGATGATTAATTTATGCA+TGG | - | tig0035425:2160-2179 | Msa1454750:intron | 20.0% |
| !! | TAAATTCATGAATAATTTGG+TGG | - | tig0035425:2186-2205 | Msa1454750:intron | 20.0% |
| !! | TAACTAACAACTTAAAAACA+GGG | + | tig0035425:2672-2691 | Msa1454750:intergenic | 20.0% |
| !! | AAAGATATAAAGATGTTTGT+GGG | + | tig0035425:3042-3061 | Msa1454750:intergenic | 20.0% |
| !! | TAAAGATATAAAGATGTTTG+TGG | + | tig0035425:3043-3062 | Msa1454750:intergenic | 20.0% |
| !! | CATCTTTATATCTTTATATG+TGG | - | tig0035425:3047-3066 | Msa1454750:intron | 20.0% |
| !! | TTTATATCTTTATATGTGGA+AGG | - | tig0035425:3051-3070 | Msa1454750:intron | 20.0% |
| !! | TTGAAAATAACTTTATACGT+AGG | - | tig0035425:3266-3285 | Msa1454750:intron | 20.0% |
| !! | TGTATAAAACAATTCAGAAA+AGG | + | tig0035425:4004-4023 | Msa1454750:intergenic | 20.0% |
| !!! | AATTGTTTTATACAATGAGA+TGG | - | tig0035425:4010-4029 | Msa1454750:intron | 20.0% |
| !!! | ATTGTTTTATACAATGAGAT+GGG | - | tig0035425:4011-4030 | Msa1454750:intron | 20.0% |
| !!! | TGTTGTTATTGTTAATATGA+TGG | - | tig0035425:4325-4344 | Msa1454750:intron | 20.0% |
| !! | GAAGATATTAAGTGTAAAAT+AGG | + | tig0035425:4378-4397 | Msa1454750:intergenic | 20.0% |
| !! | TATTTCATGTTTATGCAATT+TGG | - | tig0035425:4737-4756 | Msa1454750:intron | 20.0% |
| !!! | TTACTTCAATACTCTTATTT+GGG | + | tig0035425:5263-5282 | Msa1454750:intergenic | 20.0% |
| !! | TTTACTTCAATACTCTTATT+TGG | + | tig0035425:5264-5283 | Msa1454750:intergenic | 20.0% |
| !!! | AAGAGTATTGAAGTAAAAAA+TGG | - | tig0035425:5267-5286 | Msa1454750:intron | 20.0% |
| !! | TTCACATCTTTAATTATTCT+GGG | + | tig0035425:5309-5328 | Msa1454750:intergenic | 20.0% |
| !! | TTTCACATCTTTAATTATTC+TGG | + | tig0035425:5310-5329 | Msa1454750:intergenic | 20.0% |
| !! | TTTAGATATTCATTGTACAA+GGG | + | tig0035425:5434-5453 | Msa1454750:intergenic | 20.0% |
| !! | ATTTAGATATTCATTGTACA+AGG | + | tig0035425:5435-5454 | Msa1454750:intergenic | 20.0% |
| !!! | ACATAAAGTTTTCTTTCTTA+AGG | - | tig0035425:5506-5525 | Msa1454750:intron | 20.0% |
| !! | TGGTAAAAACAATAATTTAG+GGG | + | tig0035425:5574-5593 | Msa1454750:intergenic | 20.0% |
| !!! | ATTGTTTTTACCAATGTTTT+AGG | - | tig0035425:5581-5600 | Msa1454750:intron | 20.0% |
| !!! | AATCATTTAAAATAATAGGC+AGG | + | tig0035425:5789-5808 | Msa1454750:intergenic | 20.0% |
| !!! | ATTTTAAATGATTACATTGC+CGG | - | tig0035425:5796-5815 | Msa1454750:intron | 20.0% |
| !! | TCAAATAAAAAATCATGACA+AGG | + | tig0035425:5858-5877 | Msa1454750:intergenic | 20.0% |
| !! | AAACATTAATATCAAATTGG+TGG | + | tig0035425:6614-6633 | Msa1454750:intergenic | 20.0% |
| ! | ATTGTTTAAACTGAGTGAAA+CGG | + | tig0035425:1104-1123 | Msa1454750:intergenic | 25.0% |
| !!! | ATGATTTTAATAGAGCTGTT+AGG | - | tig0035425:1158-1177 | Msa1454750:intron | 25.0% |
| !!! | TGATTTTAATAGAGCTGTTA+GGG | - | tig0035425:1159-1178 | Msa1454750:intron | 25.0% |
| ! | CAGTAGAATTAGATAGAAAT+AGG | - | tig0035425:1828-1847 | Msa1454750:intron | 25.0% |
| !! | TGACTATGTAAAATTGATTC+TGG | - | tig0035425:1900-1919 | Msa1454750:intron | 25.0% |
| !!! | TTGTTGTTTTGTTTACACTT+TGG | - | tig0035425:2297-2316 | Msa1454750:CDS | 25.0% |
| !!! | CTTTTAGGAATTTGATTGAA+CGG | + | tig0035425:2378-2397 | Msa1454750:intergenic | 25.0% |
| ! | AACTTATCAGTTATCCATTA+CGG | + | tig0035425:2597-2616 | Msa1454750:intergenic | 25.0% |
| ! | GTAACTAACAACTTAAAAAC+AGG | + | tig0035425:2673-2692 | Msa1454750:intergenic | 25.0% |
| !!! | TTTAAGTTGTTAGTTACCAT+AGG | - | tig0035425:2676-2695 | Msa1454750:intron | 25.0% |
| !! | TAAATGCATGTATGATTTGT+TGG | + | tig0035425:2797-2816 | Msa1454750:intergenic | 25.0% |
| !! | AGATATTTTTCATCCAATGT+GGG | + | tig0035425:3247-3266 | Msa1454750:intergenic | 25.0% |
| !! | AAGATATTTTTCATCCAATG+TGG | + | tig0035425:3248-3267 | Msa1454750:intergenic | 25.0% |
| ! | TATAACATTCTCTTAGAATC+TGG | + | tig0035425:3343-3362 | Msa1454750:intergenic | 25.0% |
| !!! | TCTTGTATATTTTTACAGTG+AGG | - | tig0035425:3518-3537 | Msa1454750:intron | 25.0% |
| ! | CAAACCCAAATAAAGATTTA+TGG | - | tig0035425:3862-3881 | Msa1454750:intron | 25.0% |
| !! | TAGGCCATAAATCTTTATTT+GGG | + | tig0035425:3869-3888 | Msa1454750:intergenic | 25.0% |
| !! | GTTTAGTAATTCAACTTGTT+AGG | - | tig0035425:4064-4083 | Msa1454750:intron | 25.0% |
| ! | ATTTATGACAAGAATGAGAT+GGG | - | tig0035425:4117-4136 | Msa1454750:intron | 25.0% |
| ! | ATAAATAAACGGCAAAATCA+TGG | + | tig0035425:4201-4220 | Msa1454750:intergenic | 25.0% |
| !! | TGCCGTTTATTTATTATTTG+AGG | - | tig0035425:4207-4226 | Msa1454750:intron | 25.0% |
| ! | ATTGTTAATATGATGGTTCA+TGG | - | tig0035425:4332-4351 | Msa1454750:intron | 25.0% |
| ! | CTAAAATTATAATAGTCCGT+TGG | + | tig0035425:4528-4547 | Msa1454750:intergenic | 25.0% |
| !! | TTTTAGTATAGTGTACATGA+TGG | - | tig0035425:4542-4561 | Msa1454750:intron | 25.0% |
| ! | TATTGATACACTAATTGTTC+CGG | - | tig0035425:5028-5047 | Msa1454750:intron | 25.0% |
| ! | AGCAAAAAAAATGTTACTCA+TGG | - | tig0035425:5180-5199 | Msa1454750:intron | 25.0% |
| ! | TTATACTTATAATTGCTGAG+CGG | - | tig0035425:5343-5362 | Msa1454750:intron | 25.0% |
| !! | TTTTAAATGATTACATTGCC+GGG | - | tig0035425:5797-5816 | Msa1454750:intron | 25.0% |
| !! | TAACAACACTGGTTAAATTT+AGG | - | tig0035425:6097-6116 | Msa1454750:CDS | 25.0% |
| !!! | TGCTAGTTTTAATGCATTTT+GGG | + | tig0035425:6406-6425 | Msa1454750:intergenic | 25.0% |
| !!! | TTGCTAGTTTTAATGCATTT+TGG | + | tig0035425:6407-6426 | Msa1454750:intergenic | 25.0% |
| ! | AAAATGCATTAAAACTAGCA+AGG | - | tig0035425:6406-6425 | Msa1454750:exon | 25.0% |
| !! | TGTTTTGTGAAAAATGTGAA+AGG | - | tig0035425:6545-6564 | Msa1454750:five_prime_UTR | 25.0% |
| !!! | GGTTTTTAAGTAAGTGGATT+GGG | + | tig0035425:657-676 | Msa0453920:intergenic | 30.0% |
| TGTTTGTTTGTTTATTGCAG+AGG | + | tig0035425:740-759 | Msa0453920:intergenic | 30.0% | |
| AGTGAAATGTGTTCATTCAT+CGG | + | tig0035425:791-810 | Msa0453920:intergenic | 30.0% | |
| TTTGAATTAGGTTCACGAAT+TGG | - | tig0035425:953-972 | Msa1454750:CDS | 30.0% | |
| TAATTAGAAAGAAGTGAAGC+TGG | + | tig0035425:1034-1053 | Msa1454750:intergenic | 30.0% | |
| TCACTCAGTTTAAACAATAG+CGG | - | tig0035425:1106-1125 | Msa1454750:intron | 30.0% | |
| !! | TTGATTTTGATGAGTGATAC+TGG | - | tig0035425:1352-1371 | Msa1454750:intron | 30.0% |
| !!! | GCTGCTTTTTATGAAGAATA+CGG | - | tig0035425:1409-1428 | Msa1454750:intron | 30.0% |
| !!! | CTGCTTTTTATGAAGAATAC+GGG | - | tig0035425:1410-1429 | Msa1454750:intron | 30.0% |
| !! | TGCTTTTTATGAAGAATACG+GGG | - | tig0035425:1411-1430 | Msa1454750:intron | 30.0% |
| ! | TAGGTAAAAAATTTAGGGTG+TGG | - | tig0035425:1710-1729 | Msa1454750:intron | 30.0% |
| CATTTGTGTATTGAGTAATG+TGG | - | tig0035425:1750-1769 | Msa1454750:intron | 30.0% | |
| !! | GTTGTTTTCGTAAGCTATTT+TGG | - | tig0035425:1799-1818 | Msa1454750:intron | 30.0% |
| ! | AGAACTAGTTTACCTACAAA+TGG | + | tig0035425:2051-2070 | Msa1454750:intergenic | 30.0% |
| TTGTAAAACCAGTATCCAAA+AGG | - | tig0035425:2104-2123 | Msa1454750:intron | 30.0% | |
| !! | ATGAATAATTTGGTGGTGAA+TGG | - | tig0035425:2193-2212 | Msa1454750:intron | 30.0% |
| !!! | AATTTTAGGATTCAGAGTCA+TGG | - | tig0035425:2217-2236 | Msa1454750:intron | 30.0% |
| GTCATGGAATATTATTGTGA+AGG | - | tig0035425:2233-2252 | Msa1454750:intron | 30.0% | |
| !! | AGGTGTTTATTACCGATTTA+TGG | - | tig0035425:2334-2353 | Msa1454750:CDS | 30.0% |
| ! | TCCTAAAAGCTATAGCTTTT+TGG | - | tig0035425:2389-2408 | Msa1454750:CDS | 30.0% |
| ! | ACCAAAAAGCTATAGCTTTT+AGG | + | tig0035425:2393-2412 | Msa1454750:intergenic | 30.0% |
| !! | TATAGCTTTTTGGTGAAACA+TGG | - | tig0035425:2399-2418 | Msa1454750:CDS | 30.0% |
| TGAATTAGTATATGCCGTAA+TGG | - | tig0035425:2580-2599 | Msa1454750:intron | 30.0% | |
| ATACTGTTTGAATGATCCTA+TGG | + | tig0035425:2695-2714 | Msa1454750:intergenic | 30.0% | |
| !! | GTTTTATTGTCGTTATGAAC+TGG | - | tig0035425:2734-2753 | Msa1454750:intron | 30.0% |
| ! | ATGTGCAGTATACAGTTTTT+CGG | - | tig0035425:2822-2841 | Msa1454750:intron | 30.0% |
| TTACAATAAAAATGACCGCA+CGG | - | tig0035425:2881-2900 | Msa1454750:intron | 30.0% | |
| ACAATCTTAGAACTTGAGTT+TGG | + | tig0035425:3118-3137 | Msa1454750:intergenic | 30.0% | |
| ! | CAGAAGTTATTGTAATTTGC+TGG | - | tig0035425:3400-3419 | Msa1454750:CDS | 30.0% |
| AGTATAATATCACATGTCAG+AGG | - | tig0035425:3486-3505 | Msa1454750:CDS | 30.0% | |
| ! | TGCACACTGATTATTATATC+AGG | + | tig0035425:3570-3589 | Msa1454750:intergenic | 30.0% |
| ! | TCAGACTATAGGTAATCTTT+TGG | + | tig0035425:3736-3755 | Msa1454750:intergenic | 30.0% |
| AGATGTCAAAATCAGACTAT+AGG | + | tig0035425:3747-3766 | Msa1454750:intergenic | 30.0% | |
| GTAGGCCATAAATCTTTATT+TGG | + | tig0035425:3870-3889 | Msa1454750:intergenic | 30.0% | |
| TTTATAAAGGAAGGTCTAAC+AGG | + | tig0035425:3892-3911 | Msa1454750:intergenic | 30.0% | |
| TTCTTGACTTCTTATAGCTA+TGG | - | tig0035425:3938-3957 | Msa1454750:intron | 30.0% | |
| CAATTCAGAAAAGGTCATTT+AGG | + | tig0035425:3995-4014 | Msa1454750:intergenic | 30.0% | |
| ATACAATGAGATGGGATAAT+AGG | - | tig0035425:4019-4038 | Msa1454750:intron | 30.0% | |
| CATCTCATTCTTGTCATAAA+TGG | + | tig0035425:4118-4137 | Msa1454750:intergenic | 30.0% | |
| CATTTATGACAAGAATGAGA+TGG | - | tig0035425:4116-4135 | Msa1454750:intron | 30.0% | |
| ! | AACCATTTTCTTTCTTGCTA+AGG | - | tig0035425:4145-4164 | Msa1454750:intron | 30.0% |
| ! | ACCATTTTCTTTCTTGCTAA+GGG | - | tig0035425:4146-4165 | Msa1454750:intron | 30.0% |
| TATCTTCCTTAGTTAGCATA+TGG | - | tig0035425:4391-4410 | Msa1454750:intron | 30.0% | |
| GGATTCTGATTCTTTAACTA+AGG | - | tig0035425:4500-4519 | Msa1454750:intron | 30.0% | |
| CTATTAACCATGTGTTTGAT+TGG | - | tig0035425:4678-4697 | Msa1454750:intron | 30.0% | |
| TTCTCTAATAGGATGAACTA+AGG | - | tig0035425:4797-4816 | Msa1454750:intron | 30.0% | |
| ATGAACTAAGGAGAGATTTA+GGG | - | tig0035425:4809-4828 | Msa1454750:intron | 30.0% | |
| TGGAGATTTATTAAATGACG+AGG | - | tig0035425:4912-4931 | Msa1454750:CDS | 30.0% | |
| GGAGATTTATTAAATGACGA+GGG | - | tig0035425:4913-4932 | Msa1454750:CDS | 30.0% | |
| GAGATTTATTAAATGACGAG+GGG | - | tig0035425:4914-4933 | Msa1454750:CDS | 30.0% | |
| AGATTTATTAAATGACGAGG+GGG | - | tig0035425:4915-4934 | Msa1454750:CDS | 30.0% | |
| ACAAACTCAGTTCTATTGAT+TGG | - | tig0035425:4989-5008 | Msa1454750:intron | 30.0% | |
| ! | AATCTAGAACATGCATATAC+TGG | + | tig0035425:5074-5093 | Msa1454750:intergenic | 30.0% |
| ! | TTCAATACTCTTATTTGGGA+CGG | + | tig0035425:5259-5278 | Msa1454750:intergenic | 30.0% |
| AAAAAATGGAGTAGACAAGT+AGG | - | tig0035425:5281-5300 | Msa1454750:intron | 30.0% | |
| !! | TTTACCAATGTTTTAGGTCA+TGG | - | tig0035425:5587-5606 | Msa1454750:intron | 30.0% |
| !! | TTACCAATGTTTTAGGTCAT+GGG | - | tig0035425:5588-5607 | Msa1454750:intron | 30.0% |
| CTTTGTAATAATGCAATCAC+AGG | + | tig0035425:5646-5665 | Msa1454750:intergenic | 30.0% | |
| CTGTGATTGCATTATTACAA+AGG | - | tig0035425:5644-5663 | Msa1454750:intron | 30.0% | |
| GATTGCATTATTACAAAGGT+TGG | - | tig0035425:5648-5667 | Msa1454750:intron | 30.0% | |
| TTGTGAAATAGTGTCTATAG+CGG | + | tig0035425:5997-6016 | Msa1454750:intergenic | 30.0% | |
| ! | TAACCAGTGTTGTTAAATAG+CGG | + | tig0035425:6092-6111 | Msa1454750:intergenic | 30.0% |
| TACTAGTTAAATTTAGGCTG+AGG | - | tig0035425:6160-6179 | Msa1454750:CDS | 30.0% | |
| ACAACCATATTCAATCACTT+GGG | + | tig0035425:6231-6250 | Msa1454750:intergenic | 30.0% | |
| ! | ACATCATTTCCTTTGATTTC+AGG | - | tig0035425:6257-6276 | Msa1454750:CDS | 30.0% |
| ! | CAACCATTTTCAACAACATA+GGG | + | tig0035425:6297-6316 | Msa1454750:intergenic | 30.0% |
| ! | ACAACCATTTTCAACAACAT+AGG | + | tig0035425:6298-6317 | Msa1454750:intergenic | 30.0% |
| TATGTTGTTGAAAATGGTTG+TGG | - | tig0035425:6297-6316 | Msa1454750:CDS | 30.0% | |
| ! | AAAGTACTCTAAATTGCCTA+AGG | - | tig0035425:6320-6339 | Msa1454750:CDS | 30.0% |
| ! | ACAATTTTGAACACAGAATC+CGG | + | tig0035425:6432-6451 | Msa1454750:intergenic | 30.0% |
| GTGTATCACTAGTAAAAATG+AGG | - | tig0035425:6579-6598 | Msa1454750:five_prime_UTR | 30.0% | |
| !!! | AGTAAGTGGATTGGGTTTTT+TGG | + | tig0035425:649-668 | Msa0453920:intergenic | 35.0% |
| !!! | GGGTTTTTAAGTAAGTGGAT+TGG | + | tig0035425:658-677 | Msa0453920:intergenic | 35.0% |
| !!! | GAGTTGGGTTTTTAAGTAAG+TGG | + | tig0035425:663-682 | Msa0453920:intergenic | 35.0% |
| TTCATTCATCGGAGAAAATG+AGG | + | tig0035425:780-799 | Msa0453920:intergenic | 35.0% | |
| TAATGAGGTTGAAGAGGTTA+AGG | + | tig0035425:821-840 | Msa0453920:intergenic | 35.0% | |
| TTTGTGTAATGAGGTTGAAG+AGG | + | tig0035425:827-846 | Msa0453920:intergenic | 35.0% | |
| TGTTACAAAAGAACCCAATG+CGG | - | tig0035425:928-947 | Msa1454750:CDS | 35.0% | |
| CCTAATTCAAAAACCGCATT+GGG | + | tig0035425:944-963 | Msa1454750:intergenic | 35.0% | |
| ACCTAATTCAAAAACCGCAT+TGG | + | tig0035425:945-964 | Msa1454750:intergenic | 35.0% | |
| !! | ATTTTGATGAGTGATACTGG+TGG | - | tig0035425:1355-1374 | Msa1454750:intron | 35.0% |
| AGAATACGGGGATAATTATC+AGG | - | tig0035425:1423-1442 | Msa1454750:intron | 35.0% | |
| !! | ATATAGTGTTGGTGCTATTG+AGG | - | tig0035425:1637-1656 | Msa1454750:intron | 35.0% |
| !! | GTGCTTTTGTTTAAGAGCAA+GGG | - | tig0035425:1681-1700 | Msa1454750:CDS | 35.0% |
| !! | TGCTTTTGTTTAAGAGCAAG+GGG | - | tig0035425:1682-1701 | Msa1454750:CDS | 35.0% |
| ! | TTAAGAGCAAGGGGATTTTT+AGG | - | tig0035425:1691-1710 | Msa1454750:CDS | 35.0% |
| TATGTGTATGCTTCGTTATG+TGG | - | tig0035425:1852-1871 | Msa1454750:intron | 35.0% | |
| ! | AAGTTAGTCCTTTTGGATAC+TGG | + | tig0035425:2115-2134 | Msa1454750:intergenic | 35.0% |
| AGTATCCAAAAGGACTAACT+TGG | - | tig0035425:2114-2133 | Msa1454750:intron | 35.0% | |
| ! | TAGTTCCAAGTTAGTCCTTT+TGG | + | tig0035425:2122-2141 | Msa1454750:intergenic | 35.0% |
| !! | TGGTGGTGAATGGTAATTTT+AGG | - | tig0035425:2203-2222 | Msa1454750:intron | 35.0% |
| CAACTTCAACATTCATAGCT+CGG | - | tig0035425:2487-2506 | Msa1454750:CDS | 35.0% | |
| ! | TTCATAGCTCGGTAAGATTT+TGG | - | tig0035425:2498-2517 | Msa1454750:intron | 35.0% |
| CGAAGTTATTTGACAAGAAC+TGG | + | tig0035425:2541-2560 | Msa1454750:intergenic | 35.0% | |
| TGACTCATACATGAAAGTCA+GGG | - | tig0035425:2628-2647 | Msa1454750:intron | 35.0% | |
| TATGAACTGGATTTCTCTAG+TGG | - | tig0035425:2747-2766 | Msa1454750:intron | 35.0% | |
| CTAACTCAACCTTACAAAAC+CGG | + | tig0035425:3313-3332 | Msa1454750:intergenic | 35.0% | |
| ! | GATGCATATGTTGTTTGTTC+TGG | - | tig0035425:3427-3446 | Msa1454750:CDS | 35.0% |
| ! | TTTTACAGTGAGGTTGCTAA+AGG | - | tig0035425:3528-3547 | Msa1454750:intron | 35.0% |
| GCTCAAATCTGTAATAACTG+TGG | + | tig0035425:3661-3680 | Msa1454750:intergenic | 35.0% | |
| ACTAAACTAACCATGTTGGA+TGG | + | tig0035425:3689-3708 | Msa1454750:intergenic | 35.0% | |
| CAGAACTAAACTAACCATGT+TGG | + | tig0035425:3693-3712 | Msa1454750:intergenic | 35.0% | |
| !! | CAACATGGTTAGTTTAGTTC+TGG | - | tig0035425:3691-3710 | Msa1454750:CDS | 35.0% |
| AACTACAGATGTTGCCAATA+GGG | - | tig0035425:3819-3838 | Msa1454750:intron | 35.0% | |
| CTTCCTTTATAAAGCCTGTT+CGG | - | tig0035425:3899-3918 | Msa1454750:intron | 35.0% | |
| GCTATAAGAAGTCAAGAACA+TGG | + | tig0035425:3936-3955 | Msa1454750:intergenic | 35.0% | |
| ACCCTTAGCAAGAAAGAAAA+TGG | + | tig0035425:4150-4169 | Msa1454750:intergenic | 35.0% | |
| ! | TTTTCTTTCTTGCTAAGGGT+AGG | - | tig0035425:4150-4169 | Msa1454750:intron | 35.0% |
| ! | TGTATTGTCGACTACAATCT+TGG | - | tig0035425:4175-4194 | Msa1454750:intron | 35.0% |
| GCTCAGATTAACAATAGATG+TGG | + | tig0035425:4271-4290 | Msa1454750:intergenic | 35.0% | |
| CATCTATTGTTAATCTGAGC+TGG | - | tig0035425:4271-4290 | Msa1454750:intron | 35.0% | |
| GTTAATATGATGGTTCATGG+CGG | - | tig0035425:4335-4354 | Msa1454750:intron | 35.0% | |
| ACTTCTCCATATGCTAACTA+AGG | + | tig0035425:4400-4419 | Msa1454750:intergenic | 35.0% | |
| TTCTTTAACTAAGGCTCCAA+CGG | - | tig0035425:4509-4528 | Msa1454750:intron | 35.0% | |
| GATGAACTAAGGAGAGATTT+AGG | - | tig0035425:4808-4827 | Msa1454750:intron | 35.0% | |
| TCTTCCTGCTGTATTATTGA+TGG | - | tig0035425:4843-4862 | Msa1454750:CDS | 35.0% | |
| CTTCCTGCTGTATTATTGAT+GGG | - | tig0035425:4844-4863 | Msa1454750:CDS | 35.0% | |
| TTCCTGCTGTATTATTGATG+GGG | - | tig0035425:4845-4864 | Msa1454750:CDS | 35.0% | |
| TAGTGTATCAATACCTTCAC+TGG | + | tig0035425:5021-5040 | Msa1454750:intergenic | 35.0% | |
| TCAAGTAAAATCACATCCAC+CGG | + | tig0035425:5050-5069 | Msa1454750:intergenic | 35.0% | |
| ! | ATAGACTGTTGTCTAGTCTT+AGG | - | tig0035425:5105-5124 | Msa1454750:intron | 35.0% |
| TTCTTAAGGTAGAAGATGTC+TGG | - | tig0035425:5520-5539 | Msa1454750:intron | 35.0% | |
| TCTTAAGGTAGAAGATGTCT+GGG | - | tig0035425:5521-5540 | Msa1454750:intron | 35.0% | |
| AATCCCATGACCTAAAACAT+TGG | + | tig0035425:5594-5613 | Msa1454750:intergenic | 35.0% | |
| CATCAACAACTGTCATAATG+AGG | + | tig0035425:5702-5721 | Msa1454750:intergenic | 35.0% | |
| CTCATTATGACAGTTGTTGA+TGG | - | tig0035425:5700-5719 | Msa1454750:intron | 35.0% | |
| CCTACAAAAGCAACACAAAA+AGG | + | tig0035425:5729-5748 | Msa1454750:intergenic | 35.0% | |
| !!! | CCTTTTTGTGTTGCTTTTGT+AGG | - | tig0035425:5726-5745 | Msa1454750:intron | 35.0% |
| AAAAAATCATGACAAGGTCG+AGG | + | tig0035425:5852-5871 | Msa1454750:intergenic | 35.0% | |
| !! | AAAGTTAGCTTGCACTATTG+TGG | - | tig0035425:5880-5899 | Msa1454750:CDS | 35.0% |
| ACTATAGCACTGTTATGCAA+CGG | + | tig0035425:5973-5992 | Msa1454750:intergenic | 35.0% | |
| TACACCCAAGTGATTGAATA+TGG | - | tig0035425:6224-6243 | Msa1454750:CDS | 35.0% | |
| CACAACCATATTCAATCACT+TGG | + | tig0035425:6232-6251 | Msa1454750:intergenic | 35.0% | |
| GTTCCCTATGTTGTTGAAAA+TGG | - | tig0035425:6291-6310 | Msa1454750:CDS | 35.0% | |
| ! | ACAATTTTCGCTATCTCCTT+AGG | + | tig0035425:6339-6358 | Msa1454750:intergenic | 35.0% |
| !!! | GGACATTGCTTTTAGTTCAT+CGG | + | tig0035425:6385-6404 | Msa1454750:intergenic | 35.0% |
| AAAAATGTGAAAGGCAGCAA+AGG | - | tig0035425:6554-6573 | Msa1454750:five_prime_UTR | 35.0% | |
| !! | GAGTTGAGTTGAGTTGAGTT+GGG | + | tig0035425:678-697 | Msa0453920:intergenic | 40.0% |
| !! | TGAGTTGAGTTGAGTTGAGT+TGG | + | tig0035425:679-698 | Msa0453920:intergenic | 40.0% |
| ! | GGTTGAAGAGGTTAAGGTTT+TGG | + | tig0035425:815-834 | Msa0453920:intergenic | 40.0% |
| ! | CCCAATGCGGTTTTTGAATT+AGG | - | tig0035425:941-960 | Msa1454750:CDS | 40.0% |
| !! | GTGAACATGCTTCTGAAGTT+AGG | + | tig0035425:1012-1031 | Msa1454750:intergenic | 40.0% |
| GTGTGAGGTTGTTGAAGTAA+AGG | + | tig0035425:1057-1076 | Msa1454750:intergenic | 40.0% | |
| CTCAGTTTAAACAATAGCGG+TGG | - | tig0035425:1109-1128 | Msa1454750:intron | 40.0% | |
| AGTTTAAACAATAGCGGTGG+TGG | - | tig0035425:1112-1131 | Msa1454750:intron | 40.0% | |
| CACATGCATCAGTGTTGTAT+TGG | - | tig0035425:1576-1595 | Msa1454750:intron | 40.0% | |
| ! | CATCAGTGTTGTATTGGTCT+TGG | - | tig0035425:1582-1601 | Msa1454750:intron | 40.0% |
| CAACACTATATCCTGTCTTG+CGG | + | tig0035425:1628-1647 | Msa1454750:intergenic | 40.0% | |
| !! | GGTGCTATTGAGGTAATTAG+AGG | - | tig0035425:1647-1666 | Msa1454750:intron | 40.0% |
| !! | GGTGCTTTTGTTTAAGAGCA+AGG | - | tig0035425:1680-1699 | Msa1454750:CDS | 40.0% |
| !! | CTTTGGAGTTAATGCTATGC+AGG | - | tig0035425:2314-2333 | Msa1454750:CDS | 40.0% |
| TGTGTGCTCAGACCATAAAT+CGG | + | tig0035425:2349-2368 | Msa1454750:intergenic | 40.0% | |
| GTGACTCATACATGAAAGTC+AGG | - | tig0035425:2627-2646 | Msa1454750:intron | 40.0% | |
| AACTTGGCAATATCTCAGCA+CGG | - | tig0035425:2905-2924 | Msa1454750:intron | 40.0% | |
| TCATGCACTTTATTGGTAGG+TGG | + | tig0035425:2952-2971 | Msa1454750:intergenic | 40.0% | |
| CTGTCATGCACTTTATTGGT+AGG | + | tig0035425:2955-2974 | Msa1454750:intergenic | 40.0% | |
| GAGACTGTCATGCACTTTAT+TGG | + | tig0035425:2959-2978 | Msa1454750:intergenic | 40.0% | |
| TGCAACTGCAGGTAATAAGA+GGG | + | tig0035425:2991-3010 | Msa1454750:intergenic | 40.0% | |
| TTGCAACTGCAGGTAATAAG+AGG | + | tig0035425:2992-3011 | Msa1454750:intergenic | 40.0% | |
| CTTCCACATTGGATGAGATT+AGG | - | tig0035425:3016-3035 | Msa1454750:intron | 40.0% | |
| ATCCTACAAAACTAGCTCGT+AGG | + | tig0035425:3086-3105 | Msa1454750:intergenic | 40.0% | |
| !!! | TACGAGCTAGTTTTGTAGGA+TGG | - | tig0035425:3085-3104 | Msa1454750:intron | 40.0% |
| !!! | TAGTTTTGTAGGATGGAGTG+AGG | - | tig0035425:3092-3111 | Msa1454750:intron | 40.0% |
| CAATAGACCTTGAATAGGCT+CGG | + | tig0035425:3143-3162 | Msa1454750:intergenic | 40.0% | |
| GAGCCTATTCAAGGTCTATT+GGG | - | tig0035425:3142-3161 | Msa1454750:intron | 40.0% | |
| ! | CACGCTCTAGATTTGACAAA+TGG | + | tig0035425:3205-3224 | Msa1454750:intergenic | 40.0% |
| ! | TTGTCAAATCTAGAGCGTGA+AGG | - | tig0035425:3206-3225 | Msa1454750:intron | 40.0% |
| ! | TGTCAAATCTAGAGCGTGAA+GGG | - | tig0035425:3207-3226 | Msa1454750:intron | 40.0% |
| !! | CGGTTTTGTAAGGTTGAGTT+AGG | - | tig0035425:3311-3330 | Msa1454750:intron | 40.0% |
| !!! | TCTTCGCATTTTGAGGTCAA+GGG | - | tig0035425:3611-3630 | Msa1454750:intron | 40.0% |
| CTATTGGCAACATCTGTAGT+TGG | + | tig0035425:3820-3839 | Msa1454750:intergenic | 40.0% | |
| CAACTACAGATGTTGCCAAT+AGG | - | tig0035425:3818-3837 | Msa1454750:intron | 40.0% | |
| TAAAGGAAGGTCTAACAGGT+AGG | + | tig0035425:3888-3907 | Msa1454750:intergenic | 40.0% | |
| ! | CGAACAGGCTTTATAAAGGA+AGG | + | tig0035425:3901-3920 | Msa1454750:intergenic | 40.0% |
| TCAAGAACATGGCATACCTT+TGG | + | tig0035425:3925-3944 | Msa1454750:intergenic | 40.0% | |
| ATCAAGTCTGATCTCTCACT+AGG | + | tig0035425:4302-4321 | Msa1454750:intergenic | 40.0% | |
| GCAGATACCAATCAAACACA+TGG | + | tig0035425:4688-4707 | Msa1454750:intergenic | 40.0% | |
| GATTGTCGAGCTTCTCTAAT+AGG | - | tig0035425:4786-4805 | Msa1454750:intron | 40.0% | |
| ACTAAGGAGAGATTTAGGGA+TGG | - | tig0035425:4813-4832 | Msa1454750:CDS | 40.0% | |
| TCCTGCTGTATTATTGATGG+GGG | - | tig0035425:4846-4865 | Msa1454750:CDS | 40.0% | |
| ATCACAAGAATCTGACCTGT+GGG | + | tig0035425:4943-4962 | Msa1454750:intergenic | 40.0% | |
| TGATTGGAAGATTCCAGTGA+AGG | - | tig0035425:5005-5024 | Msa1454750:intron | 40.0% | |
| TGATACACTAATTGTTCCGG+TGG | - | tig0035425:5031-5050 | Msa1454750:intron | 40.0% | |
| ! | ATACTCTTATTTGGGACGGT+GGG | + | tig0035425:5255-5274 | Msa1454750:intergenic | 40.0% |
| ! | AATACTCTTATTTGGGACGG+TGG | + | tig0035425:5256-5275 | Msa1454750:intergenic | 40.0% |
| CTCACACTAGAAACTTTGCT+AGG | + | tig0035425:5398-5417 | Msa1454750:intergenic | 40.0% | |
| CTTAAGGTAGAAGATGTCTG+GGG | - | tig0035425:5522-5541 | Msa1454750:intron | 40.0% | |
| !!! | TTTGTGTTGCTTTTGTAGGC+TGG | - | tig0035425:5730-5749 | Msa1454750:intron | 40.0% |
| ! | GTGTTGTTAAATAGCGGCTA+TGG | + | tig0035425:6086-6105 | Msa1454750:intergenic | 40.0% |
| TAGCCGCTATTTAACAACAC+TGG | - | tig0035425:6086-6105 | Msa1454750:CDS | 40.0% | |
| GGCTGAGTTTCATACATAAG+TGG | - | tig0035425:6118-6137 | Msa1454750:CDS | 40.0% | |
| ! | TTCCTTTGATTTCAGGAAGC+TGG | - | tig0035425:6264-6283 | Msa1454750:CDS | 40.0% |
| GGAGATAGCGAAAATTGTTG+CGG | - | tig0035425:6341-6360 | Msa1454750:CDS | 40.0% | |
| !! | AAAATTGTTGCGGACTGGTT+TGG | - | tig0035425:6351-6370 | Msa1454750:CDS | 40.0% |
| !!! | GCTTTTAGTTCATCGGCTTT+TGG | + | tig0035425:6378-6397 | Msa1454750:intergenic | 40.0% |
| TGCATTAAAACTAGCAAGGC+CGG | - | tig0035425:6410-6429 | Msa1454750:exon | 40.0% | |
| GTACAGCTTAATCAACACTG+AGG | - | tig0035425:6505-6524 | Msa1454750:five_prime_UTR | 40.0% | |
| ! | TCTTTTGTAACACGCGTAGC+TGG | + | tig0035425:920-939 | Msa0453920:intergenic | 45.0% |
| ! | GCGGTGGTGGTTATAAGTTT+AGG | - | tig0035425:1125-1144 | Msa1454750:intron | 45.0% |
| CTGTTAGGGTTCATTGTGAG+AGG | - | tig0035425:1173-1192 | Msa1454750:intron | 45.0% | |
| CATTGTGAGAGGATTCCGAT+TGG | - | tig0035425:1184-1203 | Msa1454750:intron | 45.0% | |
| !! | GGAATGGTGTTGGTGGAAAT+GGG | - | tig0035425:1260-1279 | Msa1454750:intron | 45.0% |
| ! | GTGTTGGTGGAAATGGGAAT+GGG | - | tig0035425:1266-1285 | Msa1454750:intron | 45.0% |
| ! | TGTTGGTGGAAATGGGAATG+GGG | - | tig0035425:1267-1286 | Msa1454750:intron | 45.0% |
| TGGTGTGGAAGATGAAGGAT+TGG | - | tig0035425:1291-1310 | Msa1454750:intron | 45.0% | |
| GGTGTGGAAGATGAAGGATT+GGG | - | tig0035425:1292-1311 | Msa1454750:intron | 45.0% | |
| GAAGGATTGGGATTGAAGAG+TGG | - | tig0035425:1304-1323 | Msa1454750:intron | 45.0% | |
| ATTGGGATTGAAGAGTGGTG+AGG | - | tig0035425:1309-1328 | Msa1454750:intron | 45.0% | |
| TTGGGATTGAAGAGTGGTGA+GGG | - | tig0035425:1310-1329 | Msa1454750:intron | 45.0% | |
| TGAGGGGAAGAAAGTGAAGA+AGG | - | tig0035425:1327-1346 | Msa1454750:intron | 45.0% | |
| TTGATGAGTGATACTGGTGG+TGG | - | tig0035425:1358-1377 | Msa1454750:intron | 45.0% | |
| CGCAAGACAGGATATAGTGT+TGG | - | tig0035425:1626-1645 | Msa1454750:intron | 45.0% | |
| AGTTGCCAACTTCACTGTAG+AGG | + | tig0035425:1952-1971 | Msa1454750:intergenic | 45.0% | |
| GGAATTTGATTGAACGGCCA+AGG | + | tig0035425:2372-2391 | Msa1454750:intergenic | 45.0% | |
| TAGTAGGTCATCCTCCACAA+CGG | + | tig0035425:2426-2445 | Msa1454750:intergenic | 45.0% | |
| TTGTGGAGGATGACCTACTA+TGG | - | tig0035425:2426-2445 | Msa1454750:CDS | 45.0% | |
| TTGACTGATGAACCAGACGT+GGG | + | tig0035425:2458-2477 | Msa1454750:intergenic | 45.0% | |
| TTTGACTGATGAACCAGACG+TGG | + | tig0035425:2459-2478 | Msa1454750:intergenic | 45.0% | |
| ! | ATGAAAGTCAGGGCGTTAAC+TGG | - | tig0035425:2638-2657 | Msa1454750:intron | 45.0% |
| GAACTGGATTTCTCTAGTGG+TGG | - | tig0035425:2750-2769 | Msa1454750:intron | 45.0% | |
| AAAATGACCGCACGGTAACT+TGG | - | tig0035425:2889-2908 | Msa1454750:intron | 45.0% | |
| GATATTGCCAAGTTACCGTG+CGG | + | tig0035425:2899-2918 | Msa1454750:intergenic | 45.0% | |
| GTTGCAATGTGCTTCCACAT+TGG | - | tig0035425:3005-3024 | Msa1454750:intron | 45.0% | |
| AAAACTAGCTCGTAGGCAAG+AGG | + | tig0035425:3079-3098 | Msa1454750:intergenic | 45.0% | |
| !!! | TGCCTACGAGCTAGTTTTGT+AGG | - | tig0035425:3081-3100 | Msa1454750:intron | 45.0% |
| ATTGTAGCCGAGCCTATTCA+AGG | - | tig0035425:3133-3152 | Msa1454750:intron | 45.0% | |
| CGAGCCTATTCAAGGTCTAT+TGG | - | tig0035425:3141-3160 | Msa1454750:intron | 45.0% | |
| TGGCCCAATAGACCTTGAAT+AGG | + | tig0035425:3148-3167 | Msa1454750:intergenic | 45.0% | |
| GTTTGTCAAGAGTCCCACAT+TGG | - | tig0035425:3231-3250 | Msa1454750:intron | 45.0% | |
| ! | ACGTTCCTCTTCGCATTTTG+AGG | - | tig0035425:3604-3623 | Msa1454750:intron | 45.0% |
| CTTGACCTCAAAATGCGAAG+AGG | + | tig0035425:3612-3631 | Msa1454750:intergenic | 45.0% | |
| !!! | CTCTTCGCATTTTGAGGTCA+AGG | - | tig0035425:3610-3629 | Msa1454750:intron | 45.0% |
| !!! | CTTCGCATTTTGAGGTCAAG+GGG | - | tig0035425:3612-3631 | Msa1454750:intron | 45.0% |
| TCCAGCTTTCATTGCCCTAT+TGG | + | tig0035425:3836-3855 | Msa1454750:intergenic | 45.0% | |
| ! | TGGCCGAACAGGCTTTATAA+AGG | + | tig0035425:3905-3924 | Msa1454750:intergenic | 45.0% |
| TATAAAGCCTGTTCGGCCAA+AGG | - | tig0035425:3906-3925 | Msa1454750:intron | 45.0% | |
| AGTCTGATCTCTCACTAGGT+GGG | + | tig0035425:4298-4317 | Msa1454750:intergenic | 45.0% | |
| AAGTCTGATCTCTCACTAGG+TGG | + | tig0035425:4299-4318 | Msa1454750:intergenic | 45.0% | |
| ! | ATATGATGGTTCATGGCGGA+TGG | - | tig0035425:4339-4358 | Msa1454750:intron | 45.0% |
| TGGTATCTGCTTTCGCTGAT+TGG | - | tig0035425:4698-4717 | Msa1454750:intron | 45.0% | |
| GAGAGATTTAGGGATGGATG+AGG | - | tig0035425:4819-4838 | Msa1454750:CDS | 45.0% | |
| CCTGCTGTATTATTGATGGG+GGG | - | tig0035425:4847-4866 | Msa1454750:CDS | 45.0% | |
| GATCACAAGAATCTGACCTG+TGG | + | tig0035425:4944-4963 | Msa1454750:intergenic | 45.0% | |
| GGTCAGATTCTTGTGATCTG+TGG | - | tig0035425:4946-4965 | Msa1454750:CDS | 45.0% | |
| AAGGTTGGATCTCATTGTCG+CGG | - | tig0035425:5663-5682 | Msa1454750:intron | 45.0% | |
| AAATGATTACATTGCCGGGC+AGG | - | tig0035425:5801-5820 | Msa1454750:intron | 45.0% | |
| ATCATGACAAGGTCGAGGAA+TGG | + | tig0035425:5847-5866 | Msa1454750:intergenic | 45.0% | |
| GCTATGGCAGTAGAGCATAT+AGG | + | tig0035425:6070-6089 | Msa1454750:intergenic | 45.0% | |
| TGCCAGCTTCCTGAAATCAA+AGG | + | tig0035425:6269-6288 | Msa1454750:intergenic | 45.0% | |
| TAGCGAAAATTGTTGCGGAC+TGG | - | tig0035425:6346-6365 | Msa1454750:CDS | 45.0% | |
| TTACTAGCTCGTGCATGTCA+TGG | + | tig0035425:6455-6474 | Msa1454750:intergenic | 45.0% | |
| AATGTGAAAGGCAGCAAAGG+TGG | - | tig0035425:6557-6576 | Msa1454750:five_prime_UTR | 45.0% | |
| CTTCAACAACCTCACACGTG+TGG | - | tig0035425:1060-1079 | Msa1454750:intron | 50.0% | |
| ! | ATGATGATGCCACACGTGTG+AGG | + | tig0035425:1072-1091 | Msa1454750:intergenic | 50.0% |
| !! | GGGAATGGTGTTGGTGGAAA+TGG | - | tig0035425:1259-1278 | Msa1454750:intron | 50.0% |
| !! | GGTGTTGGTGGAAATGGGAA+TGG | - | tig0035425:1265-1284 | Msa1454750:intron | 50.0% |
| !! | AAATGGGAATGGGGTTGGTG+TGG | - | tig0035425:1276-1295 | Msa1454750:intron | 50.0% |
| TGGGATTGAAGAGTGGTGAG+GGG | - | tig0035425:1311-1330 | Msa1454750:intron | 50.0% | |
| TGACACTGACACGTTGCTAC+TGG | - | tig0035425:1518-1537 | Msa1454750:CDS | 50.0% | |
| AGCTGCCTCTACAGTGAAGT+TGG | - | tig0035425:1944-1963 | Msa1454750:intron | 50.0% | |
| TATGGTCTGAGCACACACCT+TGG | - | tig0035425:2352-2371 | Msa1454750:CDS | 50.0% | |
| TGGTGAAACATGGACCGTTG+TGG | - | tig0035425:2409-2428 | Msa1454750:CDS | 50.0% | |
| TGAAACATGGACCGTTGTGG+AGG | - | tig0035425:2412-2431 | Msa1454750:CDS | 50.0% | |
| TGACTGATGAACCAGACGTG+GGG | + | tig0035425:2457-2476 | Msa1454750:intergenic | 50.0% | |
| GGCAATATCTCAGCACGGTT+CGG | - | tig0035425:2910-2929 | Msa1454750:intron | 50.0% | |
| ! | TGGAAGCACATTGCAACTGC+AGG | + | tig0035425:3002-3021 | Msa1454750:intergenic | 50.0% |
| GGGCCTAATCTCATCCAATG+TGG | + | tig0035425:3022-3041 | Msa1454750:intergenic | 50.0% | |
| CTATCACGTCTCCCACTACT+GGG | - | tig0035425:3172-3191 | Msa1454750:intron | 50.0% | |
| TATCACGTCTCCCACTACTG+GGG | - | tig0035425:3173-3192 | Msa1454750:intron | 50.0% | |
| !! | CCTTACAAAACCGGCTTGCA+AGG | + | tig0035425:3304-3323 | Msa1454750:intergenic | 50.0% |
| !! | CCTTGCAAGCCGGTTTTGTA+AGG | - | tig0035425:3301-3320 | Msa1454750:intron | 50.0% |
| AGAGGAACGTGTTGCATCAG+TGG | + | tig0035425:3594-3613 | Msa1454750:intergenic | 50.0% | |
| TGAGCACATGCCATCCAACA+TGG | - | tig0035425:3676-3695 | Msa1454750:CDS | 50.0% | |
| GCCAATAGGGCAATGAAAGC+TGG | - | tig0035425:3832-3851 | Msa1454750:intron | 50.0% | |
| CCCCCCATCAATAATACAGC+AGG | + | tig0035425:4850-4869 | Msa1454750:intergenic | 50.0% | |
| GCTGTATTATTGATGGGGGG+AGG | - | tig0035425:4850-4869 | Msa1454750:CDS | 50.0% | |
| TTATTGATGGGGGGAGGTGA+AGG | - | tig0035425:4856-4875 | Msa1454750:CDS | 50.0% | |
| GTCCCATTGAAGCTACTGCT+CGG | - | tig0035425:4884-4903 | Msa1454750:CDS | 50.0% | |
| TCCCATTGAAGCTACTGCTC+GGG | - | tig0035425:4885-4904 | Msa1454750:CDS | 50.0% | |
| ATTGCAGAGGCCATGATTCG+AGG | - | tig0035425:5763-5782 | Msa1454750:intron | 50.0% | |
| AATAGGCAGGCCTCGAATCA+TGG | + | tig0035425:5776-5795 | Msa1454750:intergenic | 50.0% | |
| TGAGAACCACATTACCTGCC+CGG | + | tig0035425:5818-5837 | Msa1454750:intergenic | 50.0% | |
| TCCGATTGGATTCGCTTCGC+TGG | - | tig0035425:1198-1217 | Msa1454750:intron | 55.0% | |
| CCCAGCGAAGCGAATCCAAT+CGG | + | tig0035425:1202-1221 | Msa1454750:intergenic | 55.0% | |
| CCGATTGGATTCGCTTCGCT+GGG | - | tig0035425:1199-1218 | Msa1454750:intron | 55.0% | |
| !! | GCTTCGCTGGGAGTTGATGA+CGG | - | tig0035425:1211-1230 | Msa1454750:intron | 55.0% |
| GGTGGAAATGGGAATGGGGT+TGG | - | tig0035425:1271-1290 | Msa1454750:intron | 55.0% | |
| !! | GGGGTTGGTGTGGAAGATGA+AGG | - | tig0035425:1286-1305 | Msa1454750:intron | 55.0% |
| TGGTCATCGTGCTTCTGCTG+AGG | - | tig0035425:1378-1397 | Msa1454750:intron | 55.0% | |
| TGTGTCTGACACCGCAAGAC+AGG | - | tig0035425:1614-1633 | Msa1454750:intron | 55.0% | |
| ACGTGGGGCAGTTCCATAGT+AGG | + | tig0035425:2442-2461 | Msa1454750:intergenic | 55.0% | |
| ! | GTAGTGGGAGACGTGATAGC+TGG | + | tig0035425:3171-3190 | Msa1454750:intergenic | 55.0% |
| GCTATCACGTCTCCCACTAC+TGG | - | tig0035425:3171-3190 | Msa1454750:intron | 55.0% | |
| ATGGAGCATGCCCCAGTAGT+GGG | + | tig0035425:3186-3205 | Msa1454750:intergenic | 55.0% | |
| AATGGAGCATGCCCCAGTAG+TGG | + | tig0035425:3187-3206 | Msa1454750:intergenic | 55.0% | |
| TGGCATACCTTTGGCCGAAC+AGG | + | tig0035425:3916-3935 | Msa1454750:intergenic | 55.0% | |
| GCCCGAGCAGTAGCTTCAAT+GGG | + | tig0035425:4889-4908 | Msa1454750:intergenic | 55.0% | |
| TGCCCGAGCAGTAGCTTCAA+TGG | + | tig0035425:4890-4909 | Msa1454750:intergenic | 55.0% | |
| !! | TTGCTTTTGTAGGCTGGCCC+AGG | - | tig0035425:5736-5755 | Msa1454750:intron | 55.0% |
| !! | TGCTTTTGTAGGCTGGCCCA+GGG | - | tig0035425:5737-5756 | Msa1454750:intron | 55.0% |
| TGGCCTCTGCAATTGTCCCT+GGG | + | tig0035425:5756-5775 | Msa1454750:intergenic | 55.0% | |
| ATGGCCTCTGCAATTGTCCC+TGG | + | tig0035425:5757-5776 | Msa1454750:intergenic | 55.0% | |
| ACATTGCCGGGCAGGTAATG+TGG | - | tig0035425:5809-5828 | Msa1454750:intron | 55.0% | |
| !! | TCGCTGGGAGTTGATGACGG+TGG | - | tig0035425:1214-1233 | Msa1454750:intron | 60.0% |
| !! | CTGGGAGTTGATGACGGTGG+TGG | - | tig0035425:1217-1236 | Msa1454750:intron | 60.0% |
| !! | GGAGTTGATGACGGTGGTGG+TGG | - | tig0035425:1220-1239 | Msa1454750:intron | 60.0% |
| !! | GTTGATGACGGTGGTGGTGG+TGG | - | tig0035425:1223-1242 | Msa1454750:intron | 60.0% |
| !! | TGGTGGTGGTGTTGGTGGTG+AGG | - | tig0035425:1237-1256 | Msa1454750:intron | 60.0% |
| !! | GGTGGTGGTGTTGGTGGTGA+GGG | - | tig0035425:1238-1257 | Msa1454750:intron | 60.0% |
| !! | GTGGTGGTGTTGGTGGTGAG+GGG | - | tig0035425:1239-1258 | Msa1454750:intron | 60.0% |
| !! | GGTGTTGGTGGTGAGGGGAA+TGG | - | tig0035425:1244-1263 | Msa1454750:intron | 60.0% |
| GGTGGTGAGGGGAATGGTGT+TGG | - | tig0035425:1250-1269 | Msa1454750:intron | 60.0% | |
| ! | GGTGAGGGGAATGGTGTTGG+TGG | - | tig0035425:1253-1272 | Msa1454750:intron | 60.0% |
| CTATGGAACTGCCCCACGTC+TGG | - | tig0035425:2443-2462 | Msa1454750:CDS | 60.0% | |
| GTGGGAGACGTGATAGCTGG+TGG | + | tig0035425:3168-3187 | Msa1454750:intergenic | 60.0% | |
| GCGTCTCTCACCTTGCAAGC+CGG | - | tig0035425:3291-3310 | Msa1454750:intron | 60.0% | |
| ! | ATGGGGGGAGGTGAAGGCAT+GGG | - | tig0035425:4862-4881 | Msa1454750:CDS | 60.0% |
| GAAGCTACTGCTCGGGCACT+TGG | - | tig0035425:4892-4911 | Msa1454750:CDS | 60.0% | |
| AATGACGAGGGGGTTCCCAC+AGG | - | tig0035425:4925-4944 | Msa1454750:CDS | 60.0% | |
| TGGCCCAGGGACAATTGCAG+AGG | - | tig0035425:5750-5769 | Msa1454750:intron | 60.0% | |
| !! | GACGGTGGTGGTGGTGGTGT+TGG | - | tig0035425:1229-1248 | Msa1454750:intron | 65.0% |
| !! | GGTGGTGGTGGTGGTGTTGG+TGG | - | tig0035425:1232-1251 | Msa1454750:intron | 65.0% |
| GATGGGGGGAGGTGAAGGCA+TGG | - | tig0035425:4861-4880 | Msa1454750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035425 | gene | 640 | 6678 | 640 | ID=Msa1454750;Name=Msa1454750 |
| tig0035425 | mRNA | 640 | 6678 | 640 | ID=Msa1454750-mRNA-1;Parent=Msa1454750;Name=Msa1454750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=268|1|1|1|1|1|8|163|535 |
| tig0035425 | exon | 640 | 1039 | 640 | ID=Msa1454750-mRNA-1:exon:19932;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 1496 | 1570 | 1496 | ID=Msa1454750-mRNA-1:exon:19931;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 1653 | 1715 | 1653 | ID=Msa1454750-mRNA-1:exon:19930;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 2292 | 2510 | 2292 | ID=Msa1454750-mRNA-1:exon:19929;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 3391 | 3532 | 3391 | ID=Msa1454750-mRNA-1:exon:19928;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 3621 | 3782 | 3621 | ID=Msa1454750-mRNA-1:exon:19927;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 4810 | 4982 | 4810 | ID=Msa1454750-mRNA-1:exon:19926;Parent=Msa1454750-mRNA-1 |
| tig0035425 | exon | 5874 | 6678 | 5874 | ID=Msa1454750-mRNA-1:exon:19925;Parent=Msa1454750-mRNA-1 |
| tig0035425 | five_prime_UTR | 6411 | 6678 | 6411 | ID=Msa1454750-mRNA-1:five_prime_utr;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 5874 | 6410 | 5874 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 4810 | 4982 | 4810 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 3621 | 3782 | 3621 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 3391 | 3532 | 3391 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 2292 | 2510 | 2292 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 1653 | 1715 | 1653 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 1496 | 1570 | 1496 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | CDS | 803 | 1039 | 803 | ID=Msa1454750-mRNA-1:cds;Parent=Msa1454750-mRNA-1 |
| tig0035425 | three_prime_UTR | 640 | 802 | 640 | ID=Msa1454750-mRNA-1:three_prime_utr;Parent=Msa1454750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
