AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1030280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030280 MtrunA17_Chr7g0251231 98.113 583 10 1 16 597 48 630 0.0 1114
Msa1030280 MtrunA17_Chr3g0102681 28.715 599 370 13 23 594 69 637 2.19e-23 104
Msa1030280 MtrunA17_Chr5g0446731 28.600 507 317 12 103 592 164 642 1.70e-13 73.6
Msa1030280 MtrunA17_Chr3g0078801 27.787 601 375 16 23 592 70 642 4.34e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030280 AT1G66840.2 40.345 580 321 8 23 591 35 600 1.44e-98 313
Msa1030280 AT1G66840.1 40.345 580 321 8 23 591 35 600 1.44e-98 313
Msa1030280 AT5G38150.1 39.298 570 315 8 24 588 33 576 6.07e-86 279
Msa1030280 AT5G55860.1 28.059 613 380 15 14 594 52 635 5.72e-22 100
Msa1030280 AT2G26570.1 25.447 503 329 11 23 495 204 690 6.28e-14 75.5
Msa1030280 AT2G26570.2 25.447 503 329 11 23 495 204 690 6.28e-14 75.5

Find 78 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGATACTCGTATTCAAATT+TGG 0.191661 7_1:-64285829 None:intergenic
CGCCTCAAGTTCCTCCTTTA+CGG 0.197031 7_1:-64285313 None:intergenic
AAAGAAAGTTATCCCGAATT+TGG 0.197738 7_1:+64286223 Msa1030280:CDS
CTGAATAACTTTGCCAAATT+CGG 0.202551 7_1:-64286236 None:intergenic
GTTGCAGATTCAATTGAATT+TGG 0.253403 7_1:+64285188 Msa1030280:CDS
TGATGCTTCGATTTCTTTCT+CGG 0.285883 7_1:-64284896 None:intergenic
TGGCGTTGAATTTACTCTTT+AGG 0.299788 7_1:-64286278 None:intergenic
AGTTCTCTTGTTCTTGAAGT+AGG 0.315905 7_1:-64284544 None:intergenic
ATTGAATTTGGTCAAAGAAA+TGG 0.316878 7_1:+64285200 Msa1030280:CDS
TGAATAACTTTGCCAAATTC+GGG 0.330803 7_1:-64286235 None:intergenic
AAATGAGTTCTCATTCAAAT+TGG 0.332919 7_1:+64285068 Msa1030280:CDS
AACAACTGAAGCTTTAGCTT+TGG 0.339949 7_1:+64285728 Msa1030280:CDS
AGCAAGTACTTGTTCTTCAT+TGG 0.359144 7_1:-64284980 None:intergenic
AGAATTGGAATATCTCAAAA+AGG 0.374578 7_1:+64284819 Msa1030280:CDS
AGAACAAGTACTTGCTGAAT+TGG 0.382678 7_1:+64284987 Msa1030280:CDS
TTAAGAAAGGGTGACGAATC+AGG 0.386265 7_1:+64285270 Msa1030280:CDS
AGAAAGAGTATTAAATCAAA+TGG 0.421669 7_1:+64286110 Msa1030280:CDS
TGGTCAAAGAAATGGAGAAA+AGG 0.424730 7_1:+64285208 Msa1030280:CDS
CTCCTTTACGGTTTGTAACT+CGG 0.426077 7_1:-64285301 None:intergenic
AGATGAAAGTGTGAAACTAT+TGG 0.426555 7_1:+64285239 Msa1030280:CDS
GTTCTCTTGTTCTTGAAGTA+GGG 0.431248 7_1:-64284543 None:intergenic
GAAGGTACAAAGAGAGTAGA+TGG 0.434441 7_1:+64284590 Msa1030280:CDS
TTCCAATGTCTCTTCTAGCT+TGG 0.442664 7_1:-64284570 None:intergenic
TGCACAAGTGATGAGAGAAT+TGG 0.443791 7_1:+64284804 Msa1030280:CDS
TTAGCTTTGATTAGAGATGA+AGG 0.446414 7_1:+64285348 Msa1030280:CDS
GGTCAAAGAAATGGAGAAAA+GGG 0.450694 7_1:+64285209 Msa1030280:CDS
AAAAGAAGAAGTACTGAGAA+AGG 0.452966 7_1:+64284945 Msa1030280:CDS
AGATATTATAACAACTAAGT+TGG 0.460017 7_1:+64285626 Msa1030280:CDS
ATTGGAAGGAAGTTTAAGAA+AGG 0.468539 7_1:+64285257 Msa1030280:CDS
GGACTAATGTGCCGAGGTGC+GGG 0.475186 7_1:-64286182 None:intergenic
AGAAACAGATGAAGCTAAAA+CGG 0.476672 7_1:+64285584 Msa1030280:CDS
TTTCTCTTCTTAAGAGTGAA+AGG 0.481141 7_1:-64286203 None:intergenic
AAATCTCTCTTCTATGATTG+AGG 0.483933 7_1:+64284675 Msa1030280:CDS
CTCTTTCAAAGCTTCAATCC+TGG 0.488651 7_1:-64285010 None:intergenic
GAAATGGAGAAAAGGGTTCA+AGG 0.496156 7_1:+64285216 Msa1030280:CDS
GATTGAAGCTTTGAAAGAGT+TGG 0.497137 7_1:+64285014 Msa1030280:CDS
GAAACATTAGAGAAGGGAAA+AGG 0.500850 7_1:+64284736 Msa1030280:CDS
AAGTACTTGCTGAATTGGCC+AGG 0.505239 7_1:+64284992 Msa1030280:CDS
TGAAGCTTTGAAAGAGTTGG+AGG 0.507795 7_1:+64285017 Msa1030280:CDS
TTGGAAGGAAGTTTAAGAAA+GGG 0.508282 7_1:+64285258 Msa1030280:CDS
TGAGCTGAAGCATGTAACTA+AGG 0.508606 7_1:+64285407 Msa1030280:CDS
AAGATGGATGATACTAAAGT+TGG 0.511606 7_1:+64278887 Msa1030280:CDS
GAGCGAGAAGGAAATACTAC+TGG 0.513052 7_1:+64285932 Msa1030280:CDS
GGACATAGAAACATTAGAGA+AGG 0.526631 7_1:+64284729 Msa1030280:CDS
AACATGGTGCTATAGTTGTA+AGG 0.527263 7_1:+64284761 Msa1030280:CDS
GGTTCAAAATCTCAATTCAA+AGG 0.530696 7_1:+64285461 Msa1030280:CDS
AAGTTGCAGCAGCTGAGGCA+TGG 0.536231 7_1:+64285892 Msa1030280:CDS
CACCAAGCTAGAAGAGACAT+TGG 0.548216 7_1:+64284568 Msa1030280:CDS
CAAAGCTAAGGCGAAAATGA+AGG 0.549569 7_1:+64284708 Msa1030280:CDS
ATATCTAATATGCGAGGTGA+AGG 0.550812 7_1:+64286384 Msa1030280:three_prime_UTR
GGTTTACATCAAAGAGAAGA+TGG 0.551787 7_1:+64286010 Msa1030280:CDS
TGATTTGTCTATCTCTTCCG+TGG 0.565283 7_1:-64285118 None:intergenic
GGAATCAAGTTACAAAGCTA+AGG 0.568567 7_1:+64284696 Msa1030280:CDS
GACATAGAAACATTAGAGAA+GGG 0.576628 7_1:+64284730 Msa1030280:CDS
GGCATGGATTGAAGCGCTCA+AGG 0.579700 7_1:+64285908 Msa1030280:CDS
TTGTGCATGCTATTGTAGAC+CGG 0.580229 7_1:-64286313 None:intergenic
TGATGAAGTTCTATTTGCCA+AGG 0.582919 7_1:-64286416 None:intergenic
TACCGAGTTACAAACCGTAA+AGG 0.586528 7_1:+64285299 Msa1030280:CDS
AGAAGCCGCATCTGCTGCAG+AGG 0.589655 7_1:+64285506 Msa1030280:CDS
TAGACCGGAATTTAAAACAA+TGG 0.591043 7_1:-64286298 None:intergenic
GAAAGTGTGAAACTATTGGA+AGG 0.594809 7_1:+64285243 Msa1030280:CDS
AGGACTAATGTGCCGAGGTG+CGG 0.603591 7_1:-64286183 None:intergenic
GTTTAAGCTAAAGCTTGACG+TGG 0.614923 7_1:+64284846 Msa1030280:CDS
TAGAACAAGAAAACGCGAGA+AGG 0.615767 7_1:+64286064 Msa1030280:CDS
AACCGTAAAGGAGGAACTTG+AGG 0.624780 7_1:+64285311 Msa1030280:CDS
AACAGCAGGGGAAAATAGTG+AGG 0.626121 7_1:+64286451 Msa1030280:three_prime_UTR
GGAAGAGATAGACAAATCAA+AGG 0.630376 7_1:+64285122 Msa1030280:CDS
CGTAAAGGAGGAACTTGAGG+CGG 0.638927 7_1:+64285314 Msa1030280:CDS
AAGCTAGAAGAGACATTGGA+AGG 0.645006 7_1:+64284572 Msa1030280:CDS
CGAGTTACAAACCGTAAAGG+AGG 0.647932 7_1:+64285302 Msa1030280:CDS
AGCGCTCAAGGCGAGCGAGA+AGG 0.649761 7_1:+64285920 Msa1030280:CDS
AACTTCATATCTAATATGCG+AGG 0.655272 7_1:+64286378 Msa1030280:three_prime_UTR
GAGAAGGGAAAAGGTCAACA+TGG 0.667735 7_1:+64284745 Msa1030280:CDS
GTTTGAGATCGATACGAGTG+AGG 0.668514 7_1:+64285665 Msa1030280:CDS
GTGAAAGGACTAATGTGCCG+AGG 0.674695 7_1:-64286188 None:intergenic
CTGCTGCTTCACCCGCACCT+CGG 0.677290 7_1:+64286171 Msa1030280:CDS
TGCAAGAAGAGTTAGTAGTG+AGG 0.677779 7_1:+64286034 Msa1030280:CDS
ATGGTGCTATAGTTGTAAGG+AGG 0.689249 7_1:+64284764 Msa1030280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAAATATTTATATAT+TGG - chr7_1:64277466-64277485 None:intergenic 0.0%
!!! AAGTTATCTTTTTTTTTTTT+TGG + chr7_1:64278135-64278154 Msa1030280:intron 10.0%
!! TACAAAAAAAAACAAAAAAA+TGG + chr7_1:64278181-64278200 Msa1030280:intron 10.0%
!! AGAATTAATTCATTTATTTA+TGG - chr7_1:64278238-64278257 None:intergenic 10.0%
!!! GAATAAACAAAAGTTTTTAT+TGG - chr7_1:64276728-64276747 None:intergenic 15.0%
!!! TTGTTTTTTTGCTTATAATT+TGG + chr7_1:64276918-64276937 Msa1030280:intron 15.0%
!!! TGTTTTTTTGCTTATAATTT+GGG + chr7_1:64276919-64276938 Msa1030280:intron 15.0%
!! AACGATCTATAAATAAATTA+AGG + chr7_1:64277064-64277083 Msa1030280:intron 15.0%
!! ATTGAAGAAACAATTTATAA+AGG - chr7_1:64277137-64277156 None:intergenic 15.0%
!! TCAAAAAAAAAAACAAATCA+AGG - chr7_1:64277184-64277203 None:intergenic 15.0%
!!! GAGATATATTGTTTTTTTAA+AGG + chr7_1:64277338-64277357 Msa1030280:intron 15.0%
!!! CAATATAAATAAGTTTTGAA+AGG + chr7_1:64277652-64277671 Msa1030280:intron 15.0%
!!! CAATATTTATCTTTTTGTTT+AGG - chr7_1:64277707-64277726 None:intergenic 15.0%
!! AGAGATTAAAAACAAAAAAA+TGG + chr7_1:64277755-64277774 Msa1030280:intron 15.0%
!! GAGATTAAAAACAAAAAAAT+GGG + chr7_1:64277756-64277775 Msa1030280:intron 15.0%
!! ACATGAAAAATAAAAATATG+TGG - chr7_1:64278647-64278666 None:intergenic 15.0%
!!! TTCAAGAAACCAATTATTTT+CGG + chr7_1:64276464-64276483 Msa1030280:intron 20.0%
!!! GTTTTTTTTGCTTATATTTC+AGG - chr7_1:64276623-64276642 None:intergenic 20.0%
!!! GTCTTTTTTGCTTATATTTT+GGG - chr7_1:64276659-64276678 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG - chr7_1:64276660-64276679 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG - chr7_1:64276815-64276834 None:intergenic 20.0%
!!! TTCTTTGGAATAAGTTTTAT+GGG - chr7_1:64276840-64276859 None:intergenic 20.0%
!!! TTTCTTTGGAATAAGTTTTA+TGG - chr7_1:64276841-64276860 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG - chr7_1:64276855-64276874 None:intergenic 20.0%
!! CAAAATAGGATATAATTATC+AGG - chr7_1:64277107-64277126 None:intergenic 20.0%
!! ATAAAGGACTAAAACAAAAT+AGG - chr7_1:64277121-64277140 None:intergenic 20.0%
!!! TAACATTTTAAGTTTTTGTG+GGG - chr7_1:64277295-64277314 None:intergenic 20.0%
!!! GTAACATTTTAAGTTTTTGT+GGG - chr7_1:64277296-64277315 None:intergenic 20.0%
!!! TGTAACATTTTAAGTTTTTG+TGG - chr7_1:64277297-64277316 None:intergenic 20.0%
!!! GTTGTTTGAATTTTTTTAGA+GGG + chr7_1:64277400-64277419 Msa1030280:intron 20.0%
!!! TGAATAGATTTTGCTAATTA+AGG - chr7_1:64277557-64277576 None:intergenic 20.0%
!!! CCTTGAAATATTCATTTTAA+GGG - chr7_1:64277624-64277643 None:intergenic 20.0%
!!! TCCTTGAAATATTCATTTTA+AGG - chr7_1:64277625-64277644 None:intergenic 20.0%
!! AAATTGAAAGATGAGAAAAT+TGG + chr7_1:64278468-64278487 Msa1030280:intron 20.0%
!! AATTGAAAGATGAGAAAATT+GGG + chr7_1:64278469-64278488 Msa1030280:intron 20.0%
!! AACAGTGATAAATAATATAG+AGG - chr7_1:64278718-64278737 None:intergenic 20.0%
!!! TTATTAGTCTATATGATGAT+AGG + chr7_1:64278939-64278958 Msa1030280:intron 20.0%
!!! CTAACATTGATTAAAATTCA+AGG - chr7_1:64279744-64279763 None:intergenic 20.0%
!!! AAGTTAAGATTAAGTTGAAT+GGG - chr7_1:64282542-64282561 None:intergenic 20.0%
!!! CTATCTTTTGTTATAGAAAT+AGG + chr7_1:64284383-64284402 Msa1030280:intron 20.0%
!!! TTTGTTATAGAAATAGGTTA+TGG + chr7_1:64284389-64284408 Msa1030280:intron 20.0%
!! TTGTATATGCATTATTATTG+TGG + chr7_1:64284457-64284476 Msa1030280:intron 20.0%
!! AAACACAAGAAAAAAGTTAA+AGG + chr7_1:64285092-64285111 Msa1030280:CDS 20.0%
!! AGATATTATAACAACTAAGT+TGG + chr7_1:64285626-64285645 Msa1030280:CDS 20.0%
!!! AGAAAGAGTATTAAATCAAA+TGG + chr7_1:64286110-64286129 Msa1030280:CDS 20.0%
! AGAAGAATGTTATAACTTCT+AGG - chr7_1:64276285-64276304 None:intergenic 25.0%
!! TCAAGAAACCAATTATTTTC+GGG + chr7_1:64276465-64276484 Msa1030280:intron 25.0%
!! CACTCTTTAAGGATTATAAA+TGG + chr7_1:64276519-64276538 Msa1030280:intron 25.0%
!!! AAACAATTTTCATTGGCTAT+TGG - chr7_1:64276808-64276827 None:intergenic 25.0%
!! TTTTTGCTTATAATTTGGGA+CGG + chr7_1:64276923-64276942 Msa1030280:intron 25.0%
!!! AAAAAAAAAGTGTCTTGCTA+AGG - chr7_1:64276997-64277016 None:intergenic 25.0%
! TTTATTTATAGATCGTTCGT+TGG - chr7_1:64277061-64277080 None:intergenic 25.0%
! TCAAGGATAAAAAATGTTGA+AGG - chr7_1:64277167-64277186 None:intergenic 25.0%
!!! CGTTGTTTGAATTTTTTTAG+AGG + chr7_1:64277399-64277418 Msa1030280:intron 25.0%
!!! TATTCTTTTGTTTCTTGTCT+CGG + chr7_1:64277506-64277525 Msa1030280:intron 25.0%
! CCCTTAAAATGAATATTTCA+AGG + chr7_1:64277621-64277640 Msa1030280:intron 25.0%
!!! CATCAATTTTGATTTGGTTA+AGG - chr7_1:64277953-64277972 None:intergenic 25.0%
!!! TGTAAGCATCAATTTTGATT+TGG - chr7_1:64277959-64277978 None:intergenic 25.0%
! AAAATTGATGCTTACATTAG+AGG + chr7_1:64277963-64277982 Msa1030280:intron 25.0%
!! AGTGAATTTAAAACCAAAAG+TGG + chr7_1:64278435-64278454 Msa1030280:intron 25.0%
!! TCATCTTTCAATTTTTGCTT+AGG - chr7_1:64278462-64278481 None:intergenic 25.0%
!! TAAATTCATTCCTTCAGTTT+TGG + chr7_1:64278861-64278880 Msa1030280:intron 25.0%
! TATATGATGATAGGAATCAT+AGG + chr7_1:64278948-64278967 Msa1030280:intron 25.0%
! AAGTAGAAGTGAAATAAATG+CGG + chr7_1:64279068-64279087 Msa1030280:intron 25.0%
!!! AATTTTAGGAGAAAATTCCT+GGG - chr7_1:64279233-64279252 None:intergenic 25.0%
!!! TTCATTTTTGCTTCTTTAGT+TGG + chr7_1:64279485-64279504 Msa1030280:intron 25.0%
! TTTGAAAGAATAACAATGGT+TGG - chr7_1:64279518-64279537 None:intergenic 25.0%
! CAAGTTTGAAAGAATAACAA+TGG - chr7_1:64279522-64279541 None:intergenic 25.0%
!! CATTGTTATTCTTTCAAACT+TGG + chr7_1:64279520-64279539 Msa1030280:intron 25.0%
! TATATATTTACTGTTGGTAC+TGG - chr7_1:64280032-64280051 None:intergenic 25.0%
! ACTGGTTATATATTTACTGT+TGG - chr7_1:64280038-64280057 None:intergenic 25.0%
! ATAGAGAAATGTTTGTACTT+CGG - chr7_1:64280134-64280153 None:intergenic 25.0%
! ATAGCAAAACTTCTTGAATT+TGG + chr7_1:64281885-64281904 Msa1030280:intron 25.0%
! ATATGTGAAGATTGTATACT+TGG - chr7_1:64282198-64282217 None:intergenic 25.0%
! CAAATGAAAATCCTAATCTA+TGG - chr7_1:64282311-64282330 None:intergenic 25.0%
!!! GAAGTTAAGATTAAGTTGAA+TGG - chr7_1:64282543-64282562 None:intergenic 25.0%
! AATTCTTGAAGATTTCTTTC+TGG + chr7_1:64282631-64282650 Msa1030280:intron 25.0%
! ATTCTTGAAGATTTCTTTCT+GGG + chr7_1:64282632-64282651 Msa1030280:intron 25.0%
! CAAATAAAGTTCATTTGATG+AGG - chr7_1:64283241-64283260 None:intergenic 25.0%
! AAGTAGAAGTGAAATAAATG+CGG + chr7_1:64279068-64279087 Msa1030280:intron 25.0%
!!! AATTTTAGGAGAAAATTCCT+GGG - chr7_1:64279233-64279252 None:intergenic 25.0%
!!! TTCATTTTTGCTTCTTTAGT+TGG + chr7_1:64279485-64279504 Msa1030280:intron 25.0%
! TTTGAAAGAATAACAATGGT+TGG - chr7_1:64279518-64279537 None:intergenic 25.0%
! CAAGTTTGAAAGAATAACAA+TGG - chr7_1:64279522-64279541 None:intergenic 25.0%
!! CATTGTTATTCTTTCAAACT+TGG + chr7_1:64279520-64279539 Msa1030280:intron 25.0%
! AGAATTGGAATATCTCAAAA+AGG + chr7_1:64284819-64284838 Msa1030280:CDS 25.0%
! AAATGAGTTCTCATTCAAAT+TGG + chr7_1:64285068-64285087 Msa1030280:CDS 25.0%
! ATTGAATTTGGTCAAAGAAA+TGG + chr7_1:64285200-64285219 Msa1030280:CDS 25.0%
! TAGATACTCGTATTCAAATT+TGG - chr7_1:64285832-64285851 None:intergenic 25.0%
!! ACTCAAAGAAAACATTTTGA+AGG + chr7_1:64285977-64285996 Msa1030280:CDS 25.0%
!!! ATTGCTAAATTTTAACAGCA+GGG + chr7_1:64286438-64286457 Msa1030280:three_prime_UTR 25.0%
ATGTTATAACTTCTAGGCTA+TGG - chr7_1:64276279-64276298 None:intergenic 30.0%
! ATTCAATGAATTTTCTGCAG+TGG - chr7_1:64276402-64276421 None:intergenic 30.0%
! AGCATTTTCCCGAAAATAAT+TGG - chr7_1:64276476-64276495 None:intergenic 30.0%
TGCTTATATTTCAGGATTGA+GGG - chr7_1:64276615-64276634 None:intergenic 30.0%
TTGCTTATATTTCAGGATTG+AGG - chr7_1:64276616-64276635 None:intergenic 30.0%
! GCTATTGGTTATGGAAAAAA+TGG - chr7_1:64276793-64276812 None:intergenic 30.0%
!! TTTTCATTGGCTATTGGTTA+TGG - chr7_1:64276802-64276821 None:intergenic 30.0%
TGTTGACGAAAAACATTTGA+AGG + chr7_1:64277375-64277394 Msa1030280:intron 30.0%
CACAGTTATTACAAACTACA+TGG - chr7_1:64278104-64278123 None:intergenic 30.0%
! GTAGTTTGTAATAACTGTGT+TGG + chr7_1:64278105-64278124 Msa1030280:intron 30.0%
GCACAATCACAATATTAAAG+GGG - chr7_1:64278269-64278288 None:intergenic 30.0%
CGCACAATCACAATATTAAA+GGG - chr7_1:64278270-64278289 None:intergenic 30.0%
TCGCACAATCACAATATTAA+AGG - chr7_1:64278271-64278290 None:intergenic 30.0%
ATATTGTGATTGTGCGATAT+CGG + chr7_1:64278274-64278293 Msa1030280:intron 30.0%
AATCCTTCACAAATAAGTGA+AGG - chr7_1:64278301-64278320 None:intergenic 30.0%
! AATAGTGTAACTTGTGACAA+GGG - chr7_1:64278396-64278415 None:intergenic 30.0%
! TAATAGTGTAACTTGTGACA+AGG - chr7_1:64278397-64278416 None:intergenic 30.0%
ACAGAAAATTAGATAGTGAC+AGG + chr7_1:64278521-64278540 Msa1030280:intron 30.0%
TTCAAATGTCCTAACAAGTA+GGG - chr7_1:64278610-64278629 None:intergenic 30.0%
GTGTTGAATATGCTAATACA+TGG + chr7_1:64278791-64278810 Msa1030280:intron 30.0%
!! AATACATGGTGCTTGTTTTT+AGG + chr7_1:64278805-64278824 Msa1030280:intron 30.0%
AAGATGGATGATACTAAAGT+TGG + chr7_1:64278887-64278906 Msa1030280:CDS 30.0%
TTCATTGAAGAAAACTCAGA+TGG + chr7_1:64278991-64279010 Msa1030280:intron 30.0%
ACAAGATTGTTAACGAAGTT+CGG + chr7_1:64279102-64279121 Msa1030280:intron 30.0%
! TGCTGCAGATCTTTTAATAA+AGG + chr7_1:64279151-64279170 Msa1030280:intron 30.0%
! GCTGCAGATCTTTTAATAAA+GGG + chr7_1:64279152-64279171 Msa1030280:intron 30.0%
!! GAATTTTAGGAGAAAATTCC+TGG - chr7_1:64279234-64279253 None:intergenic 30.0%
! AAACTCAGTGTGAGAATTTT+AGG - chr7_1:64279247-64279266 None:intergenic 30.0%
ATTGAAATCAGTCTTCAAGT+GGG - chr7_1:64279591-64279610 None:intergenic 30.0%
AAAGAATTGATATGGCTTCA+AGG - chr7_1:64279924-64279943 None:intergenic 30.0%
AAGCTAGCAAAGAATTGATA+TGG - chr7_1:64279932-64279951 None:intergenic 30.0%
TATAACCAGTTGTACTTCTT+CGG + chr7_1:64280048-64280067 Msa1030280:intron 30.0%
AAAGGAGAGATAAAAGTAGA+AGG - chr7_1:64280110-64280129 None:intergenic 30.0%
GAAGTACAAACATTTCTCTA+TGG + chr7_1:64280133-64280152 Msa1030280:intron 30.0%
!! AAGCTGTTAAATGGATTTTG+AGG - chr7_1:64280172-64280191 None:intergenic 30.0%
! GTTTTGCAAAGATTCAACAT+GGG - chr7_1:64280413-64280432 None:intergenic 30.0%
! TGTTTTGCAAAGATTCAACA+TGG - chr7_1:64280414-64280433 None:intergenic 30.0%
TGTTGAATCTTTGCAAAACA+CGG + chr7_1:64280414-64280433 Msa1030280:intron 30.0%
! ATACCAAGAATTTTCTTTGC+CGG + chr7_1:64280497-64280516 Msa1030280:intron 30.0%
GAATTTGACATGAAGGATTT+AGG - chr7_1:64280524-64280543 None:intergenic 30.0%
GTCAAAAGAATTTGACATGA+AGG - chr7_1:64280531-64280550 None:intergenic 30.0%
AGAAAAAGGGAAAGAGAATA+TGG - chr7_1:64280780-64280799 None:intergenic 30.0%
TAAGTTACCTATAGGAAAGA+AGG - chr7_1:64281074-64281093 None:intergenic 30.0%
TTTGATCTCAAATCAGACAT+GGG - chr7_1:64281104-64281123 None:intergenic 30.0%
GGATGATGAAAACAAAAAGA+TGG - chr7_1:64281494-64281513 None:intergenic 30.0%
TATGTGCATATTAGTGATCA+AGG - chr7_1:64281595-64281614 None:intergenic 30.0%
ATAAAATACCAGAAGAGGTA+TGG - chr7_1:64281669-64281688 None:intergenic 30.0%
! TATTTGAAGCTTTCAAGAGA+TGG - chr7_1:64281987-64282006 None:intergenic 30.0%
GATGATTGGAAGATTTCAAA+AGG - chr7_1:64282414-64282433 None:intergenic 30.0%
TGGAAATGAACAATCTTGTA+AGG - chr7_1:64282580-64282599 None:intergenic 30.0%
TACAAGATTGTTCATTTCCA+AGG + chr7_1:64282580-64282599 Msa1030280:intron 30.0%
ATCTTCAAGAATTATGTTCC+TGG - chr7_1:64282624-64282643 None:intergenic 30.0%
GATACCAACTGAACTTAATT+GGG + chr7_1:64283142-64283161 Msa1030280:intron 30.0%
ATAAAGTTCATTTGATGAGG+CGG - chr7_1:64283238-64283257 None:intergenic 30.0%
! TGAACTTTATTTGATGCTGA+AGG + chr7_1:64283248-64283267 Msa1030280:intron 30.0%
GTGAAAATTGAAAAGTTCGA+TGG - chr7_1:64283509-64283528 None:intergenic 30.0%
TTTCGCGAATAGTGAAAAAT+TGG - chr7_1:64283651-64283670 None:intergenic 30.0%
ACAAGATTGTTAACGAAGTT+CGG + chr7_1:64279102-64279121 Msa1030280:intron 30.0%
! TGCTGCAGATCTTTTAATAA+AGG + chr7_1:64279151-64279170 Msa1030280:intron 30.0%
! GCTGCAGATCTTTTAATAAA+GGG + chr7_1:64279152-64279171 Msa1030280:intron 30.0%
!! GAATTTTAGGAGAAAATTCC+TGG - chr7_1:64279234-64279253 None:intergenic 30.0%
! AAACTCAGTGTGAGAATTTT+AGG - chr7_1:64279247-64279266 None:intergenic 30.0%
AAATCTCTCTTCTATGATTG+AGG + chr7_1:64284675-64284694 Msa1030280:CDS 30.0%
GACATAGAAACATTAGAGAA+GGG + chr7_1:64284730-64284749 Msa1030280:CDS 30.0%
!! AAAAGAAGAAGTACTGAGAA+AGG + chr7_1:64284945-64284964 Msa1030280:CDS 30.0%
CACAAGAAAAAAGTTAAAGG+AGG + chr7_1:64285095-64285114 Msa1030280:CDS 30.0%
GTTGCAGATTCAATTGAATT+TGG + chr7_1:64285188-64285207 Msa1030280:CDS 30.0%
! AGATGAAAGTGTGAAACTAT+TGG + chr7_1:64285239-64285258 Msa1030280:CDS 30.0%
ATTGGAAGGAAGTTTAAGAA+AGG + chr7_1:64285257-64285276 Msa1030280:CDS 30.0%
TTGGAAGGAAGTTTAAGAAA+GGG + chr7_1:64285258-64285277 Msa1030280:CDS 30.0%
!! TTAGCTTTGATTAGAGATGA+AGG + chr7_1:64285348-64285367 Msa1030280:CDS 30.0%
GGTTCAAAATCTCAATTCAA+AGG + chr7_1:64285461-64285480 Msa1030280:CDS 30.0%
AGAAACAGATGAAGCTAAAA+CGG + chr7_1:64285584-64285603 Msa1030280:CDS 30.0%
!! AAAACATTTTGAAGGAAGAG+AGG + chr7_1:64285985-64286004 Msa1030280:CDS 30.0%
!! AAACATTTTGAAGGAAGAGA+GGG + chr7_1:64285986-64286005 Msa1030280:CDS 30.0%
! TGAAACTTGATTCTTTTAGC+AGG - chr7_1:64286146-64286165 None:intergenic 30.0%
TTTCTCTTCTTAAGAGTGAA+AGG - chr7_1:64286206-64286225 None:intergenic 30.0%
AAAGAAAGTTATCCCGAATT+TGG + chr7_1:64286223-64286242 Msa1030280:CDS 30.0%
TGAATAACTTTGCCAAATTC+GGG - chr7_1:64286238-64286257 None:intergenic 30.0%
CTGAATAACTTTGCCAAATT+CGG - chr7_1:64286239-64286258 None:intergenic 30.0%
!!! AACGCCATTGTTTTAAATTC+CGG + chr7_1:64286294-64286313 Msa1030280:three_prime_UTR 30.0%
! TAGACCGGAATTTAAAACAA+TGG - chr7_1:64286301-64286320 None:intergenic 30.0%
AACTTCATATCTAATATGCG+AGG + chr7_1:64286378-64286397 Msa1030280:three_prime_UTR 30.0%
!! CATTGCTAAATTTTAACAGC+AGG + chr7_1:64286437-64286456 Msa1030280:three_prime_UTR 30.0%
!! TTGCTAAATTTTAACAGCAG+GGG + chr7_1:64286439-64286458 Msa1030280:three_prime_UTR 30.0%
AAAAGGTAGACTTTATCAGC+TGG - chr7_1:64276372-64276391 None:intergenic 35.0%
!! AATCCTTAAAGAGTGTCACA+CGG - chr7_1:64276514-64276533 None:intergenic 35.0%
CCTGAGTTAACAACAAATCA+AGG - chr7_1:64277213-64277232 None:intergenic 35.0%
!! CCTTGATTTGTTGTTAACTC+AGG + chr7_1:64277210-64277229 Msa1030280:intron 35.0%
GTTTCTTGTCTCGGTAAATA+TGG + chr7_1:64277515-64277534 Msa1030280:intron 35.0%
TCTCATTGTAACAGGAACAA+TGG + chr7_1:64277822-64277841 Msa1030280:intron 35.0%
TATGCATCAAGCTCATAGAA+TGG + chr7_1:64277845-64277864 Msa1030280:intron 35.0%
CTCCTTCCAGATCATATATA+GGG - chr7_1:64277883-64277902 None:intergenic 35.0%
TCTCCTTCCAGATCATATAT+AGG - chr7_1:64277884-64277903 None:intergenic 35.0%
TATATATGATCTGGAAGGAG+AGG + chr7_1:64277883-64277902 Msa1030280:intron 35.0%
TAAGGAGTTGTTGAACAGAT+CGG - chr7_1:64277935-64277954 None:intergenic 35.0%
TAGAGGATTGCAATTCAAGA+AGG + chr7_1:64277980-64277999 Msa1030280:intron 35.0%
! CTCTTGTGTCTTTGTTTAGT+TGG + chr7_1:64278069-64278088 Msa1030280:intron 35.0%
! TTTTTGCTTAGGACCACTTT+TGG - chr7_1:64278451-64278470 None:intergenic 35.0%
TTGTTACATCCCTACTTGTT+AGG + chr7_1:64278598-64278617 Msa1030280:intron 35.0%
GTTCAAATGTCCTAACAAGT+AGG - chr7_1:64278611-64278630 None:intergenic 35.0%
TTCTACTTAATCTGACCATG+GGG - chr7_1:64279056-64279075 None:intergenic 35.0%
CTTCTACTTAATCTGACCAT+GGG - chr7_1:64279057-64279076 None:intergenic 35.0%
ACTTCTACTTAATCTGACCA+TGG - chr7_1:64279058-64279077 None:intergenic 35.0%
GAAAATTCCTGGGTGTAATT+GGG - chr7_1:64279223-64279242 None:intergenic 35.0%
AGAAAATTCCTGGGTGTAAT+TGG - chr7_1:64279224-64279243 None:intergenic 35.0%
!! TACCGTGTGCTATTTATAGA+AGG + chr7_1:64279342-64279361 Msa1030280:intron 35.0%
!! ACCGTGTGCTATTTATAGAA+GGG + chr7_1:64279343-64279362 Msa1030280:intron 35.0%
TCCCTTCTATAAATAGCACA+CGG - chr7_1:64279347-64279366 None:intergenic 35.0%
GAAAGAATAACAATGGTTGG+TGG - chr7_1:64279515-64279534 None:intergenic 35.0%
GATTGAAATCAGTCTTCAAG+TGG - chr7_1:64279592-64279611 None:intergenic 35.0%
CACCTTTGTTAACATATCTG+CGG + chr7_1:64279707-64279726 Msa1030280:intron 35.0%
ACCTTTGTTAACATATCTGC+GGG + chr7_1:64279708-64279727 Msa1030280:intron 35.0%
CTTCATTAGATCTCTTCTTG+AGG - chr7_1:64279775-64279794 None:intergenic 35.0%
AAATGTTTGTACTTCGGCAA+AGG - chr7_1:64280128-64280147 None:intergenic 35.0%
!!! TGGATTTTGAGGTATCTAAG+AGG - chr7_1:64280161-64280180 None:intergenic 35.0%
AAATCCAGGTAAAGCTCATT+GGG - chr7_1:64280195-64280214 None:intergenic 35.0%
ATTCCATATGCTTCAGCAAT+TGG - chr7_1:64280293-64280312 None:intergenic 35.0%
TAAAGAACAATCACCTCAGA+CGG - chr7_1:64280342-64280361 None:intergenic 35.0%
GAGGTGATTGTTCTTTAGAT+AGG + chr7_1:64280345-64280364 Msa1030280:intron 35.0%
ATCACGAGAGATAAGCAAAA+AGG - chr7_1:64280473-64280492 None:intergenic 35.0%
!! GTTGATGATATGTTAGTAGC+AGG - chr7_1:64280593-64280612 None:intergenic 35.0%
ATCTCTTGAAGAAGCAACAA+TGG + chr7_1:64280645-64280664 Msa1030280:intron 35.0%
! GTTTGAAAGCTTTATGCACA+AGG - chr7_1:64280696-64280715 None:intergenic 35.0%
AGGTTAAAGAAGAGCTTGTA+TGG - chr7_1:64280752-64280771 None:intergenic 35.0%
CAGAAGGATTCTCAGAAAAA+GGG - chr7_1:64280793-64280812 None:intergenic 35.0%
TCTTCATGGAGACTTAAATG+AGG - chr7_1:64280834-64280853 None:intergenic 35.0%
GAACTAGCTAAGTTACCTAT+AGG - chr7_1:64281082-64281101 None:intergenic 35.0%
CTTTGATCTCAAATCAGACA+TGG - chr7_1:64281105-64281124 None:intergenic 35.0%
AGACTTCATTTCGTCTTTCA+TGG + chr7_1:64281123-64281142 Msa1030280:intron 35.0%
CATGCTTCATCATAATCTTC+AGG + chr7_1:64281178-64281197 Msa1030280:intron 35.0%
TACATGTTGTTAACTGATGG+AGG - chr7_1:64281208-64281227 None:intergenic 35.0%
GACTACATGTTGTTAACTGA+TGG - chr7_1:64281211-64281230 None:intergenic 35.0%
CTAGAAGACCTTCTTAATTC+AGG + chr7_1:64281259-64281278 Msa1030280:intron 35.0%
TCATCCATCTCTACATAAAC+AGG + chr7_1:64281382-64281401 Msa1030280:intron 35.0%
AAAGAGTGATGTACAAAGAC+AGG - chr7_1:64281444-64281463 None:intergenic 35.0%
!!! TTTTGTTTTCATCATCCCAG+AGG + chr7_1:64281497-64281516 Msa1030280:intron 35.0%
! CTCTCACATCTTAGAGTTTT+CGG - chr7_1:64281628-64281647 None:intergenic 35.0%
! TCTGGTATTTTATGCTCCAA+TGG + chr7_1:64281676-64281695 Msa1030280:intron 35.0%
!! AAGAAGTTTTGCTATGAGCA+CGG - chr7_1:64281880-64281899 None:intergenic 35.0%
TTCATATTCACCACCATTGT+CGG + chr7_1:64281912-64281931 Msa1030280:intron 35.0%
TTTCAAGAGATGGAAAGCAA+TGG - chr7_1:64281977-64281996 None:intergenic 35.0%
! CTTTTATCGATGATCACTCT+AGG - chr7_1:64282047-64282066 None:intergenic 35.0%
ATGAAGGTTATGCACTCAAA+AGG - chr7_1:64282255-64282274 None:intergenic 35.0%
TTAGGCCATATGAGTGAAAA+GGG - chr7_1:64282279-64282298 None:intergenic 35.0%
ATTAGGCCATATGAGTGAAA+AGG - chr7_1:64282280-64282299 None:intergenic 35.0%
AATCTATGGCACAAGAGATT+AGG - chr7_1:64282297-64282316 None:intergenic 35.0%
AATCTCTTGTGCCATAGATT+AGG + chr7_1:64282297-64282316 Msa1030280:intron 35.0%
TTGTTGCAACTGCAATCAAA+TGG + chr7_1:64282328-64282347 Msa1030280:intron 35.0%
ACGAAAAACTTAATCTCCGT+AGG - chr7_1:64282477-64282496 None:intergenic 35.0%
! GATTAAGTTTTTCGTGAGGT+CGG + chr7_1:64282482-64282501 Msa1030280:intron 35.0%
! ATTAAGTTTTTCGTGAGGTC+GGG + chr7_1:64282483-64282502 Msa1030280:intron 35.0%
! TAAGTTGAATGGGTCTGTAT+GGG - chr7_1:64282532-64282551 None:intergenic 35.0%
!! TTAAGTTGAATGGGTCTGTA+TGG - chr7_1:64282533-64282552 None:intergenic 35.0%
GAACAATCTTGTAAGGTTGT+GGG - chr7_1:64282573-64282592 None:intergenic 35.0%
TGAACAATCTTGTAAGGTTG+TGG - chr7_1:64282574-64282593 None:intergenic 35.0%
TTCCAAGGTAAACTTTACCA+AGG + chr7_1:64282595-64282614 Msa1030280:intron 35.0%
AACCTTGGTAAAGTTTACCT+TGG - chr7_1:64282600-64282619 None:intergenic 35.0%
TAAACTTTACCAAGGTTACC+AGG + chr7_1:64282603-64282622 Msa1030280:intron 35.0%
AATTATGTTCCTGGTAACCT+TGG - chr7_1:64282615-64282634 None:intergenic 35.0%
! ACTACGATGATTTCTGGATT+TGG + chr7_1:64282863-64282882 Msa1030280:intron 35.0%
AAATGGACGTGGTAAATCAA+AGG - chr7_1:64282898-64282917 None:intergenic 35.0%
!! ATTTGATGATGTTCGTGATC+TGG - chr7_1:64283015-64283034 None:intergenic 35.0%
CGATACCAACTGAACTTAAT+TGG + chr7_1:64283141-64283160 Msa1030280:intron 35.0%
ACAACCCAATTAAGTTCAGT+TGG - chr7_1:64283149-64283168 None:intergenic 35.0%
AAAGAAACCAGAATCGATGA+AGG - chr7_1:64283411-64283430 None:intergenic 35.0%
AATTGAAAAGTTCGATGGTG+CGG - chr7_1:64283504-64283523 None:intergenic 35.0%
TTAGATTCAAGTGGGAGTTA+TGG - chr7_1:64283549-64283568 None:intergenic 35.0%
AATTGTCAAAGAAGATCCAG+AGG - chr7_1:64283575-64283594 None:intergenic 35.0%
! GAGTGTTACCAATTTGTTCA+CGG - chr7_1:64283627-64283646 None:intergenic 35.0%
!!! CTCGGTATCTCTGTTATTTT+TGG - chr7_1:64283716-64283735 None:intergenic 35.0%
TTCTACTTAATCTGACCATG+GGG - chr7_1:64279056-64279075 None:intergenic 35.0%
CTTCTACTTAATCTGACCAT+GGG - chr7_1:64279057-64279076 None:intergenic 35.0%
ACTTCTACTTAATCTGACCA+TGG - chr7_1:64279058-64279077 None:intergenic 35.0%
GAAAATTCCTGGGTGTAATT+GGG - chr7_1:64279223-64279242 None:intergenic 35.0%
AGAAAATTCCTGGGTGTAAT+TGG - chr7_1:64279224-64279243 None:intergenic 35.0%
!! TACCGTGTGCTATTTATAGA+AGG + chr7_1:64279342-64279361 Msa1030280:intron 35.0%
!! ACCGTGTGCTATTTATAGAA+GGG + chr7_1:64279343-64279362 Msa1030280:intron 35.0%
TCCCTTCTATAAATAGCACA+CGG - chr7_1:64279347-64279366 None:intergenic 35.0%
GAAAGAATAACAATGGTTGG+TGG - chr7_1:64279515-64279534 None:intergenic 35.0%
GTTCTCTTGTTCTTGAAGTA+GGG - chr7_1:64284546-64284565 None:intergenic 35.0%
AGTTCTCTTGTTCTTGAAGT+AGG - chr7_1:64284547-64284566 None:intergenic 35.0%
GGAATCAAGTTACAAAGCTA+AGG + chr7_1:64284696-64284715 Msa1030280:CDS 35.0%
GGACATAGAAACATTAGAGA+AGG + chr7_1:64284729-64284748 Msa1030280:CDS 35.0%
GAAACATTAGAGAAGGGAAA+AGG + chr7_1:64284736-64284755 Msa1030280:CDS 35.0%
!! AACATGGTGCTATAGTTGTA+AGG + chr7_1:64284761-64284780 Msa1030280:CDS 35.0%
TGATGCTTCGATTTCTTTCT+CGG - chr7_1:64284899-64284918 None:intergenic 35.0%
AGCAAGTACTTGTTCTTCAT+TGG - chr7_1:64284983-64285002 None:intergenic 35.0%
! AGAACAAGTACTTGCTGAAT+TGG + chr7_1:64284987-64285006 Msa1030280:CDS 35.0%
!! GATTGAAGCTTTGAAAGAGT+TGG + chr7_1:64285014-64285033 Msa1030280:CDS 35.0%
AAAAAAGTTAAAGGAGGCCA+CGG + chr7_1:64285101-64285120 Msa1030280:CDS 35.0%
GGAAGAGATAGACAAATCAA+AGG + chr7_1:64285122-64285141 Msa1030280:CDS 35.0%
TGGTCAAAGAAATGGAGAAA+AGG + chr7_1:64285208-64285227 Msa1030280:CDS 35.0%
GGTCAAAGAAATGGAGAAAA+GGG + chr7_1:64285209-64285228 Msa1030280:CDS 35.0%
! GAAAGTGTGAAACTATTGGA+AGG + chr7_1:64285243-64285262 Msa1030280:CDS 35.0%
! AGATGAAGGTTTTCAGTTCA+TGG + chr7_1:64285362-64285381 Msa1030280:CDS 35.0%
! TTTTCAGTTCATGGCTTCTA+TGG + chr7_1:64285371-64285390 Msa1030280:CDS 35.0%
CTTGAAGAAAAACGATTCGT+CGG + chr7_1:64285440-64285459 Msa1030280:CDS 35.0%
! AACAACTGAAGCTTTAGCTT+TGG + chr7_1:64285728-64285747 Msa1030280:CDS 35.0%
GGTTTACATCAAAGAGAAGA+TGG + chr7_1:64286010-64286029 Msa1030280:CDS 35.0%
! TGGCGTTGAATTTACTCTTT+AGG - chr7_1:64286281-64286300 None:intergenic 35.0%
ATATCTAATATGCGAGGTGA+AGG + chr7_1:64286384-64286403 Msa1030280:three_prime_UTR 35.0%
TGATGAAGTTCTATTTGCCA+AGG - chr7_1:64286419-64286438 None:intergenic 35.0%
! GAATTTTCTGCAGTGGCAAA+CGG - chr7_1:64276395-64276414 None:intergenic 40.0%
!! ATCCTTAAAGAGTGTCACAC+GGG - chr7_1:64276513-64276532 None:intergenic 40.0%
! TTGCTTATAATTTGGGACGG+AGG + chr7_1:64276926-64276945 Msa1030280:intron 40.0%
! TGCTTATAATTTGGGACGGA+GGG + chr7_1:64276927-64276946 Msa1030280:intron 40.0%
TGTCTTGCTAAGGAGTTTCT+CGG - chr7_1:64276987-64277006 None:intergenic 40.0%
ATGTCCAGTCTCATTGTAAC+AGG + chr7_1:64277814-64277833 Msa1030280:intron 40.0%
TGTTCCTGTTACAATGAGAC+TGG - chr7_1:64277821-64277840 None:intergenic 40.0%
GACCCTATATATGATCTGGA+AGG + chr7_1:64277878-64277897 Msa1030280:intron 40.0%
AGGTGCAAACTCTGATGAAT+CGG + chr7_1:64278000-64278019 Msa1030280:intron 40.0%
GGTCCTTCACTTATTTGTGA+AGG + chr7_1:64278295-64278314 Msa1030280:intron 40.0%
GTAGGGATGTAACAAGAAGA+GGG - chr7_1:64278593-64278612 None:intergenic 40.0%
AGTAGGGATGTAACAAGAAG+AGG - chr7_1:64278594-64278613 None:intergenic 40.0%
AAGCAAATACCATACCTGAG+AGG - chr7_1:64278695-64278714 None:intergenic 40.0%
! CCATCTTTTGCCAAAACTGA+AGG - chr7_1:64278874-64278893 None:intergenic 40.0%
!! CCTTCAGTTTTGGCAAAAGA+TGG + chr7_1:64278871-64278890 Msa1030280:intron 40.0%
!! ATTTCGCAGCGGATTTTGTT+AGG + chr7_1:64279014-64279033 Msa1030280:intron 40.0%
AAGTTGTGCTCAACTTCAGT+TGG - chr7_1:64279669-64279688 None:intergenic 40.0%
CGCAGATATGTTAACAAAGG+TGG - chr7_1:64279709-64279728 None:intergenic 40.0%
TCCCGCAGATATGTTAACAA+AGG - chr7_1:64279712-64279731 None:intergenic 40.0%
TAGATCTCTTCTTGAGGATG+AGG - chr7_1:64279769-64279788 None:intergenic 40.0%
CATTCGAGAACAAAGCACAT+AGG - chr7_1:64279810-64279829 None:intergenic 40.0%
CAAGGATTGTTGACAGAGTT+AGG - chr7_1:64279906-64279925 None:intergenic 40.0%
TATGTAGATGCAGACTTTGC+TGG - chr7_1:64280086-64280105 None:intergenic 40.0%
CTCATTGGGAAGCTGTTAAA+TGG - chr7_1:64280181-64280200 None:intergenic 40.0%
CAAATCCAGGTAAAGCTCAT+TGG - chr7_1:64280196-64280215 None:intergenic 40.0%
AGCAGGTTTATGTCAAATCC+AGG - chr7_1:64280209-64280228 None:intergenic 40.0%
TGGAAGTTTGATGTACGCAA+TGG - chr7_1:64280273-64280292 None:intergenic 40.0%
CTTCCAATTGCTGAAGCATA+TGG + chr7_1:64280287-64280306 Msa1030280:intron 40.0%
GGAGGAAGAAAAAGAACTCA+TGG - chr7_1:64280321-64280340 None:intergenic 40.0%
TGACATGAAGGATTTAGGTC+CGG - chr7_1:64280519-64280538 None:intergenic 40.0%
CTTGAAGAAGCAACAATGGT+CGG + chr7_1:64280649-64280668 Msa1030280:intron 40.0%
AACTTCATATACCACTGCCT+TGG + chr7_1:64280713-64280732 Msa1030280:intron 40.0%
CCAGAAGGATTCTCAGAAAA+AGG - chr7_1:64280794-64280813 None:intergenic 40.0%
!! CCTTTTTCTGAGAATCCTTC+TGG + chr7_1:64280791-64280810 Msa1030280:intron 40.0%
! TTTCTGAGAATCCTTCTGGT+TGG + chr7_1:64280795-64280814 Msa1030280:intron 40.0%
ATATACATGCACCAACCAGA+AGG - chr7_1:64280809-64280828 None:intergenic 40.0%
GTGAAGACTGCATTTCTTCA+TGG - chr7_1:64280848-64280867 None:intergenic 40.0%
! CTCAAGATAGAGATTTTCGC+TGG + chr7_1:64280877-64280896 Msa1030280:intron 40.0%
TGGTGAAGCTCAATACTATC+AGG - chr7_1:64280922-64280941 None:intergenic 40.0%
! ATAGTATTGAGCTTCACCAC+TGG + chr7_1:64280923-64280942 Msa1030280:intron 40.0%
AGTCAATTCCTTCCTTCTGT+TGG + chr7_1:64280963-64280982 Msa1030280:intron 40.0%
AAAGGATTCCAACAGAAGGA+AGG - chr7_1:64280974-64280993 None:intergenic 40.0%
TGTATCTCTTAGAGCCATCA+TGG + chr7_1:64281011-64281030 Msa1030280:intron 40.0%
ATGGGTGTATCGAGTAAAAG+AGG - chr7_1:64281038-64281057 None:intergenic 40.0%
!! GAAGGCACTTCACAACAAAT+GGG - chr7_1:64281056-64281075 None:intergenic 40.0%
!! AGAAGGCACTTCACAACAAA+TGG - chr7_1:64281057-64281076 None:intergenic 40.0%
! TGAAGTGCCTTCTTTCCTAT+AGG + chr7_1:64281064-64281083 Msa1030280:intron 40.0%
GACCTTCTTAATTCAGGAAC+TGG + chr7_1:64281265-64281284 Msa1030280:intron 40.0%
CTCCAGTTCCTGAATTAAGA+AGG - chr7_1:64281270-64281289 None:intergenic 40.0%
CTTAATTCAGGAACTGGAGT+AGG + chr7_1:64281271-64281290 Msa1030280:intron 40.0%
ATTCTGCCAATTCCTCTGAT+TGG + chr7_1:64281329-64281348 Msa1030280:intron 40.0%
TTCTGCCAATTCCTCTGATT+GGG + chr7_1:64281330-64281349 Msa1030280:intron 40.0%
TATTCCCCAATCAGAGGAAT+TGG - chr7_1:64281338-64281357 None:intergenic 40.0%
AGATGATATTCCCCAATCAG+AGG - chr7_1:64281344-64281363 None:intergenic 40.0%
TGATTGGGGAATATCATCTG+TGG + chr7_1:64281345-64281364 Msa1030280:intron 40.0%
GATTGGGGAATATCATCTGT+GGG + chr7_1:64281346-64281365 Msa1030280:intron 40.0%
GGTTATGGTGAAGATGAGTT+TGG - chr7_1:64281529-64281548 None:intergenic 40.0%
GGAGCATAAAATACCAGAAG+AGG - chr7_1:64281674-64281693 None:intergenic 40.0%
TCAGCTTACTTAATCAACCG+AGG - chr7_1:64281712-64281731 None:intergenic 40.0%
AGGCTTACCAAAGAACTTCT+GGG - chr7_1:64281752-64281771 None:intergenic 40.0%
!! AGAAGTTTTGCTATGAGCAC+GGG - chr7_1:64281879-64281898 None:intergenic 40.0%
AAAAAGCTCAGAACCGACAA+TGG - chr7_1:64281928-64281947 None:intergenic 40.0%
! TGATCACTCTAGGAAGGTAT+GGG - chr7_1:64282037-64282056 None:intergenic 40.0%
! ATGATCACTCTAGGAAGGTA+TGG - chr7_1:64282038-64282057 None:intergenic 40.0%
! TATCGATGATCACTCTAGGA+AGG - chr7_1:64282043-64282062 None:intergenic 40.0%
CTTGTTCACTCTGATGTTTG+GGG - chr7_1:64282114-64282133 None:intergenic 40.0%
GCTTGTTCACTCTGATGTTT+GGG - chr7_1:64282115-64282134 None:intergenic 40.0%
! AGCTTGTTCACTCTGATGTT+TGG - chr7_1:64282116-64282135 None:intergenic 40.0%
AGCTCAAGTTTCTCCTTCTT+TGG + chr7_1:64282132-64282151 Msa1030280:intron 40.0%
GCTCAAGTTTCTCCTTCTTT+GGG + chr7_1:64282133-64282152 Msa1030280:intron 40.0%
CTCAAGTTTCTCCTTCTTTG+GGG + chr7_1:64282134-64282153 Msa1030280:intron 40.0%
ATTTCTATTGACCGAAGACC+TGG + chr7_1:64282222-64282241 Msa1030280:intron 40.0%
AAGGAAAACTACCAGGTCTT+CGG - chr7_1:64282236-64282255 None:intergenic 40.0%
CACTCAAAAGGAAAACTACC+AGG - chr7_1:64282243-64282262 None:intergenic 40.0%
TATGAGTGAAAAGGGGATGA+AGG - chr7_1:64282271-64282290 None:intergenic 40.0%
! TCATCCCCTTTTCACTCATA+TGG + chr7_1:64282271-64282290 Msa1030280:intron 40.0%
TAGGCCATATGAGTGAAAAG+GGG - chr7_1:64282278-64282297 None:intergenic 40.0%
AAATCTTCCAATCATCACCG+TGG + chr7_1:64282418-64282437 Msa1030280:intron 40.0%
! CGGAGATTAAGTTTTTCGTG+AGG + chr7_1:64282478-64282497 Msa1030280:intron 40.0%
! GATATGTTCTTTGGAGAGCA+AGG - chr7_1:64282703-64282722 None:intergenic 40.0%
! TGACGCGTTGATATGTTCTT+TGG - chr7_1:64282712-64282731 None:intergenic 40.0%
TGTTGGAATTGTGGAAAGAC+GGG - chr7_1:64282819-64282838 None:intergenic 40.0%
GTGTTGGAATTGTGGAAAGA+CGG - chr7_1:64282820-64282839 None:intergenic 40.0%
!! TCTATCGAGTGTTGGAATTG+TGG - chr7_1:64282828-64282847 None:intergenic 40.0%
ACTCGAAATCTATCGAGTGT+TGG - chr7_1:64282836-64282855 None:intergenic 40.0%
CTGAGAACTACGATGATTTC+TGG + chr7_1:64282857-64282876 Msa1030280:intron 40.0%
! ATTTCTGGATTTGGATCGTC+TGG + chr7_1:64282872-64282891 Msa1030280:intron 40.0%
AGAAATCCAACCAGAGGAAA+TGG - chr7_1:64282915-64282934 None:intergenic 40.0%
GTATTGCATACAGAGTCAAG+AGG - chr7_1:64282939-64282958 None:intergenic 40.0%
CTCTGTATGCAATACTGAAG+AGG + chr7_1:64282944-64282963 Msa1030280:intron 40.0%
TTCTCAGTGAAGAGATCAGA+CGG - chr7_1:64282992-64283011 None:intergenic 40.0%
! TTTCATCTTTTTGCTTCCCG+AGG + chr7_1:64283034-64283053 Msa1030280:intron 40.0%
! TGGTATCGAATTTGACGATG+AGG - chr7_1:64283129-64283148 None:intergenic 40.0%
AATCGATGAAGGATGATGAG+TGG - chr7_1:64283400-64283419 None:intergenic 40.0%
!! TCATCATCCTTCATCGATTC+TGG + chr7_1:64283401-64283420 Msa1030280:intron 40.0%
!! TCTGGTTTCTTTTCTGTGAG+AGG + chr7_1:64283419-64283438 Msa1030280:intron 40.0%
AGAGGAGGTTAGATTCAAGT+GGG - chr7_1:64283557-64283576 None:intergenic 40.0%
! TGTTACCAATTTGTTCACGG+AGG - chr7_1:64283624-64283643 None:intergenic 40.0%
! TTCCAATGTCTCTTCTAGCT+TGG - chr7_1:64284573-64284592 None:intergenic 40.0%
AAGCTAGAAGAGACATTGGA+AGG + chr7_1:64284572-64284591 Msa1030280:CDS 40.0%
! GAAGGTACAAAGAGAGTAGA+TGG + chr7_1:64284590-64284609 Msa1030280:CDS 40.0%
CAAAGCTAAGGCGAAAATGA+AGG + chr7_1:64284708-64284727 Msa1030280:CDS 40.0%
!! ATGGTGCTATAGTTGTAAGG+AGG + chr7_1:64284764-64284783 Msa1030280:CDS 40.0%
TGCACAAGTGATGAGAGAAT+TGG + chr7_1:64284804-64284823 Msa1030280:CDS 40.0%
GTTTAAGCTAAAGCTTGACG+TGG + chr7_1:64284846-64284865 Msa1030280:CDS 40.0%
! CTGTTTTGCAAGAGAAATCG+CGG + chr7_1:64284872-64284891 Msa1030280:CDS 40.0%
! TGTTTTGCAAGAGAAATCGC+GGG + chr7_1:64284873-64284892 Msa1030280:CDS 40.0%
CTCTTTCAAAGCTTCAATCC+TGG - chr7_1:64285013-64285032 None:intergenic 40.0%
!! TGAAGCTTTGAAAGAGTTGG+AGG + chr7_1:64285017-64285036 Msa1030280:CDS 40.0%
! TGATTTGTCTATCTCTTCCG+TGG - chr7_1:64285121-64285140 None:intergenic 40.0%
GAAATGGAGAAAAGGGTTCA+AGG + chr7_1:64285216-64285235 Msa1030280:CDS 40.0%
TTAAGAAAGGGTGACGAATC+AGG + chr7_1:64285270-64285289 Msa1030280:CDS 40.0%
TACCGAGTTACAAACCGTAA+AGG + chr7_1:64285299-64285318 Msa1030280:CDS 40.0%
CTCCTTTACGGTTTGTAACT+CGG - chr7_1:64285304-64285323 None:intergenic 40.0%
TGAGCTGAAGCATGTAACTA+AGG + chr7_1:64285407-64285426 Msa1030280:CDS 40.0%
ACGAGTGAGGAAAAATTGCA+AGG + chr7_1:64285678-64285697 Msa1030280:CDS 40.0%
TAAAAAAGTTGCAGCAGCTG+AGG + chr7_1:64285887-64285906 Msa1030280:CDS 40.0%
TGCAAGAAGAGTTAGTAGTG+AGG + chr7_1:64286034-64286053 Msa1030280:CDS 40.0%
TAGAACAAGAAAACGCGAGA+AGG + chr7_1:64286064-64286083 Msa1030280:CDS 40.0%
TTGTGCATGCTATTGTAGAC+CGG - chr7_1:64286316-64286335 None:intergenic 40.0%
GAAGCTCAACAAAGCGACAA+CGG - chr7_1:64276312-64276331 None:intergenic 45.0%
TAGACTTTATCAGCTGGCGA+TGG - chr7_1:64276366-64276385 None:intergenic 45.0%
GCGTGACCCTATATATGATC+TGG + chr7_1:64277874-64277893 Msa1030280:intron 45.0%
GGTGCAAACTCTGATGAATC+GGG + chr7_1:64278001-64278020 Msa1030280:intron 45.0%
TGTCCAAAACCAGTCACAAC+CGG + chr7_1:64278552-64278571 Msa1030280:intron 45.0%
TATCAATGACCGGTTGTGAC+TGG - chr7_1:64278564-64278583 None:intergenic 45.0%
GGATGTAACAAGAAGAGGGA+GGG - chr7_1:64278589-64278608 None:intergenic 45.0%
TGAGAGGTTGAGACTGTGAT+TGG - chr7_1:64278679-64278698 None:intergenic 45.0%
AATCACAGTCTCAACCTCTC+AGG + chr7_1:64278678-64278697 Msa1030280:intron 45.0%
! AACTCAGATGGATTTCGCAG+CGG + chr7_1:64279003-64279022 Msa1030280:intron 45.0%
AACTACGCACAATTTCCCCA+TGG + chr7_1:64279038-64279057 Msa1030280:intron 45.0%
AAATAGCACACGGTAGTGCA+AGG - chr7_1:64279337-64279356 None:intergenic 45.0%
AGCCACCAACTAGTCAATTG+TGG + chr7_1:64279545-64279564 Msa1030280:intron 45.0%
GCCACCAACTAGTCAATTGT+GGG + chr7_1:64279546-64279565 Msa1030280:intron 45.0%
! ACCCACAATTGACTAGTTGG+TGG - chr7_1:64279550-64279569 None:intergenic 45.0%
AGGACCCACAATTGACTAGT+TGG - chr7_1:64279553-64279572 None:intergenic 45.0%
GTCTTCAAGTGGGAGATTGT+TGG - chr7_1:64279581-64279600 None:intergenic 45.0%
CTAGAGTAAGAGACCAGAGA+AGG - chr7_1:64279642-64279661 None:intergenic 45.0%
TAGTCAGAGTGCGATACATC+TGG - chr7_1:64279850-64279869 None:intergenic 45.0%
GACAGAGTTAGGATTCATGC+AGG - chr7_1:64279895-64279914 None:intergenic 45.0%
TACATACTCAGCCTCTGTAG+TGG + chr7_1:64279962-64279981 Msa1030280:intron 45.0%
!! TGTCGCTTTATCCACTACAG+AGG - chr7_1:64279976-64279995 None:intergenic 45.0%
! TTGGTACTGGAGCAGTTAGT+TGG - chr7_1:64280019-64280038 None:intergenic 45.0%
! GATCACCGAAGAAGTACAAC+TGG - chr7_1:64280056-64280075 None:intergenic 45.0%
! TCTTTTTCTTCCTCCGTCTG+AGG + chr7_1:64280326-64280345 Msa1030280:intron 45.0%
! AGGCGAAAATGACTTGCCAA+CGG + chr7_1:64280365-64280384 Msa1030280:intron 45.0%
GGTCCGGCAAAGAAAATTCT+TGG - chr7_1:64280503-64280522 None:intergenic 45.0%
GGAAAGAGAATATGGTGTGC+AGG - chr7_1:64280772-64280791 None:intergenic 45.0%
CACCACTGGAGCAAAAATCT+CGG + chr7_1:64280937-64280956 Msa1030280:intron 45.0%
GGTCAAAGGATTCCAACAGA+AGG - chr7_1:64280978-64280997 None:intergenic 45.0%
GGAATCCTTTGACCACTAGT+CGG + chr7_1:64280984-64281003 Msa1030280:intron 45.0%
GAATCCTTTGACCACTAGTC+GGG + chr7_1:64280985-64281004 Msa1030280:intron 45.0%
CGAGTAAAAGAGGACCATGA+TGG - chr7_1:64281028-64281047 None:intergenic 45.0%
GACCATGGATGCTAGTAAGT+GGG - chr7_1:64281155-64281174 None:intergenic 45.0%
AGACCATGGATGCTAGTAAG+TGG - chr7_1:64281156-64281175 None:intergenic 45.0%
TGATGAAGCATGTCAGACCA+TGG - chr7_1:64281170-64281189 None:intergenic 45.0%
TCTGCCAATTCCTCTGATTG+GGG + chr7_1:64281331-64281350 Msa1030280:intron 45.0%
ATATCATCTGTGGGACTTCC+TGG + chr7_1:64281355-64281374 Msa1030280:intron 45.0%
GTAGAGATGGATGATGTTCC+AGG - chr7_1:64281376-64281395 None:intergenic 45.0%
CGAGCCTGTTTATGTAGAGA+TGG - chr7_1:64281389-64281408 None:intergenic 45.0%
AGGCATAACACAACCACCAA+CGG - chr7_1:64281424-64281443 None:intergenic 45.0%
! TGTTTTCATCATCCCAGAGG+CGG + chr7_1:64281500-64281519 Msa1030280:intron 45.0%
! AGAGGTATGGAGTGGAAAAG+AGG - chr7_1:64281656-64281675 None:intergenic 45.0%
TTTCCACTCCATACCTCTTC+TGG + chr7_1:64281658-64281677 Msa1030280:intron 45.0%
! ATACCAGAAGAGGTATGGAG+TGG - chr7_1:64281664-64281683 None:intergenic 45.0%
CTTAATCAACCGAGGTCCAT+CGG - chr7_1:64281704-64281723 None:intergenic 45.0%
CAGGCTTACCAAAGAACTTC+TGG - chr7_1:64281753-64281772 None:intergenic 45.0%
CTCAGCTACACCATTGTGTT+GGG + chr7_1:64281822-64281841 Msa1030280:intron 45.0%
TCAGCTACACCATTGTGTTG+GGG + chr7_1:64281823-64281842 Msa1030280:intron 45.0%
AGAATGGAAAGAACTGTGCC+AGG - chr7_1:64281853-64281872 None:intergenic 45.0%
CAAGAGATGGAAAGCAATGG+TGG - chr7_1:64281974-64281993 None:intergenic 45.0%
GAAGTAATGCTTCCCACCAA+TGG + chr7_1:64282071-64282090 Msa1030280:intron 45.0%
TAATGCTTCCCACCAATGGA+TGG + chr7_1:64282075-64282094 Msa1030280:intron 45.0%
AATGCTTCCCACCAATGGAT+GGG + chr7_1:64282076-64282095 Msa1030280:intron 45.0%
AAGTGGAAGAACCCCAAAGA+AGG - chr7_1:64282148-64282167 None:intergenic 45.0%
AGAGTCAGCTTTCAGACAAG+TGG - chr7_1:64282165-64282184 None:intergenic 45.0%
GGTACTCTTTACAAGACAGC+TGG - chr7_1:64282360-64282379 None:intergenic 45.0%
TCTTGTAAGGTTGTGGGCAA+AGG - chr7_1:64282567-64282586 None:intergenic 45.0%
GAATCAAGAGGCGAAAGATG+AGG - chr7_1:64282763-64282782 None:intergenic 45.0%
TTCGCCTCTTGATTCTTTGC+TGG + chr7_1:64282768-64282787 Msa1030280:intron 45.0%
TCGCCTCTTGATTCTTTGCT+GGG + chr7_1:64282769-64282788 Msa1030280:intron 45.0%
ACTCCCAGCAAAGAATCAAG+AGG - chr7_1:64282775-64282794 None:intergenic 45.0%
TTTACCACGTCCATTTCCTC+TGG + chr7_1:64282902-64282921 Msa1030280:intron 45.0%
AGAGGAAGAAATCCAACCAG+AGG - chr7_1:64282921-64282940 None:intergenic 45.0%
TGTCTTCCCTACCAGATAGT+TGG - chr7_1:64283088-64283107 None:intergenic 45.0%
TTTACGCTTCGGATGACAGA+AGG - chr7_1:64283212-64283231 None:intergenic 45.0%
AAGAGCCTTCATAAGACCAG+CGG + chr7_1:64283289-64283308 Msa1030280:intron 45.0%
CTTCTCGATAGACAAGCACT+TGG - chr7_1:64283374-64283393 None:intergenic 45.0%
CAAGTGCTTGTCTATCGAGA+AGG + chr7_1:64283372-64283391 Msa1030280:intron 45.0%
CAGAGGAGGTTAGATTCAAG+TGG - chr7_1:64283558-64283577 None:intergenic 45.0%
CACTTGAATCTAACCTCCTC+TGG + chr7_1:64283556-64283575 Msa1030280:intron 45.0%
TGTCAAAGAAGATCCAGAGG+AGG - chr7_1:64283572-64283591 None:intergenic 45.0%
!! GGAGGTGTTCTAAATCACAG+TGG - chr7_1:64283606-64283625 None:intergenic 45.0%
GAACACCTCCGTGAACAAAT+TGG + chr7_1:64283616-64283635 Msa1030280:intron 45.0%
AATAACAGAGATACCGAGCC+AGG + chr7_1:64283718-64283737 Msa1030280:intron 45.0%
! GAGCTCTGATACCAGTTGTT+AGG + chr7_1:64283740-64283759 Msa1030280:intron 45.0%
GTGCGTAGTTTCCTAACAAC+TGG - chr7_1:64283754-64283773 None:intergenic 45.0%
AACTACGCACAATTTCCCCA+TGG + chr7_1:64279038-64279057 Msa1030280:intron 45.0%
AAATAGCACACGGTAGTGCA+AGG - chr7_1:64279337-64279356 None:intergenic 45.0%
AGCCACCAACTAGTCAATTG+TGG + chr7_1:64279545-64279564 Msa1030280:intron 45.0%
GCCACCAACTAGTCAATTGT+GGG + chr7_1:64279546-64279565 Msa1030280:intron 45.0%
! ACCCACAATTGACTAGTTGG+TGG - chr7_1:64279550-64279569 None:intergenic 45.0%
AGGACCCACAATTGACTAGT+TGG - chr7_1:64279553-64279572 None:intergenic 45.0%
TGAGAAATCTGTTGGTGTGC+AGG - chr7_1:64284299-64284318 None:intergenic 45.0%
CACACCAACAGATTTCTCAG+CGG + chr7_1:64284300-64284319 Msa1030280:intron 45.0%
CTTACCGCTGAGAAATCTGT+TGG - chr7_1:64284307-64284326 None:intergenic 45.0%
CACCAAGCTAGAAGAGACAT+TGG + chr7_1:64284568-64284587 Msa1030280:CDS 45.0%
GAGAAGGGAAAAGGTCAACA+TGG + chr7_1:64284745-64284764 Msa1030280:CDS 45.0%
! AAGTACTTGCTGAATTGGCC+AGG + chr7_1:64284992-64285011 Msa1030280:CDS 45.0%
CGAGTTACAAACCGTAAAGG+AGG + chr7_1:64285302-64285321 Msa1030280:CDS 45.0%
AACCGTAAAGGAGGAACTTG+AGG + chr7_1:64285311-64285330 Msa1030280:CDS 45.0%
! TTTTTCCTCTGCAGCAGATG+CGG - chr7_1:64285514-64285533 None:intergenic 45.0%
! GTTTGAGATCGATACGAGTG+AGG + chr7_1:64285665-64285684 Msa1030280:CDS 45.0%
GAGCGAGAAGGAAATACTAC+TGG + chr7_1:64285932-64285951 Msa1030280:CDS 45.0%
!! CATTTTGAAGGAAGAGAGGG+AGG + chr7_1:64285989-64286008 Msa1030280:CDS 45.0%
! GGTGAAGGATTTTCATGCCT+TGG + chr7_1:64286399-64286418 Msa1030280:three_prime_UTR 45.0%
AACAGCAGGGGAAAATAGTG+AGG + chr7_1:64286451-64286470 Msa1030280:three_prime_UTR 45.0%
!!! TTTTATCTTTATATATATTT+AGG - chr7_1:64278496-64278515 None:intergenic 5.0%
TCTGCAGTGGCAAACGGAAA+AGG - chr7_1:64276389-64276408 None:intergenic 50.0%
!! TAAAGAGTGTCACACGGGCT+CGG - chr7_1:64276508-64276527 None:intergenic 50.0%
AGCCCGTGTGACACTCTTTA+AGG + chr7_1:64276508-64276527 Msa1030280:intron 50.0%
!!! TGACCGGTTGTGACTGGTTT+TGG - chr7_1:64278558-64278577 None:intergenic 50.0%
!! AGGGAGGGAGTATCAATGAC+CGG - chr7_1:64278574-64278593 None:intergenic 50.0%
GGGATGTAACAAGAAGAGGG+AGG - chr7_1:64278590-64278609 None:intergenic 50.0%
CAGTCTCAACCTCTCAGGTA+TGG + chr7_1:64278683-64278702 Msa1030280:intron 50.0%
GGCCAATAATGCCTACTCTC+CGG + chr7_1:64279123-64279142 Msa1030280:intron 50.0%
GTCCGGAGAGTAGGCATTAT+TGG - chr7_1:64279128-64279147 None:intergenic 50.0%
AAAGATCTGCAGCAGCAGTC+CGG - chr7_1:64279145-64279164 None:intergenic 50.0%
! CCTGGGTGTAATTGGGTTGT+GGG - chr7_1:64279216-64279235 None:intergenic 50.0%
! TCCTGGGTGTAATTGGGTTG+TGG - chr7_1:64279217-64279236 None:intergenic 50.0%
CGTGAAGCAGCAAAAGGTGA+AGG - chr7_1:64279449-64279468 None:intergenic 50.0%
!! TCACCTTTTGCTGCTTCACG+TGG + chr7_1:64279449-64279468 Msa1030280:intron 50.0%
CAACCACGTGAAGCAGCAAA+AGG - chr7_1:64279455-64279474 None:intergenic 50.0%
!! CTTTTGCTGCTTCACGTGGT+TGG + chr7_1:64279453-64279472 Msa1030280:intron 50.0%
CTCTGGTCTCTTACTCTAGC+AGG + chr7_1:64279643-64279662 Msa1030280:intron 50.0%
GCTTCCCAATGAGCTTTACC+TGG + chr7_1:64280188-64280207 Msa1030280:intron 50.0%
ATGCAGTGGGAGTTGTTAGC+AGG - chr7_1:64280226-64280245 None:intergenic 50.0%
TGCTAACAACTCCCACTGCA+TGG + chr7_1:64280225-64280244 Msa1030280:intron 50.0%
TGTACGCAATGGTCTGTACG+AGG - chr7_1:64280262-64280281 None:intergenic 50.0%
AGAACAATCACCTCAGACGG+AGG - chr7_1:64280339-64280358 None:intergenic 50.0%
AATGGTCGGCATTGCACTTC+TGG + chr7_1:64280663-64280682 Msa1030280:intron 50.0%
TGAAACAAGCTCCAAGGCAG+TGG - chr7_1:64280727-64280746 None:intergenic 50.0%
! ACTGCCTTGGAGCTTGTTTC+AGG + chr7_1:64280726-64280745 Msa1030280:intron 50.0%
ATGGCCTGAAACAAGCTCCA+AGG - chr7_1:64280733-64280752 None:intergenic 50.0%
! CACCGAGATTTTTGCTCCAG+TGG - chr7_1:64280942-64280961 None:intergenic 50.0%
AAAGCCCGACTAGTGGTCAA+AGG - chr7_1:64280992-64281011 None:intergenic 50.0%
GAGATACAAAGCCCGACTAG+TGG - chr7_1:64280999-64281018 None:intergenic 50.0%
CTCCCACTTACTAGCATCCA+TGG + chr7_1:64281150-64281169 Msa1030280:intron 50.0%
! TTATGCTCCAATGGCACCGA+TGG + chr7_1:64281685-64281704 Msa1030280:intron 50.0%
GCTTCTGCCCAGAAGTTCTT+TGG + chr7_1:64281742-64281761 Msa1030280:intron 50.0%
GCTCAGCTACACCATTGTGT+TGG + chr7_1:64281821-64281840 Msa1030280:intron 50.0%
CTATGAGCACGGGATCAGAA+TGG - chr7_1:64281869-64281888 None:intergenic 50.0%
AAGCTCAGAACCGACAATGG+TGG - chr7_1:64281925-64281944 None:intergenic 50.0%
ATAGCTCGCGGTAGAAAGAG+TGG - chr7_1:64282381-64282400 None:intergenic 50.0%
CAGTCTTCCACGGTGATGAT+TGG - chr7_1:64282428-64282447 None:intergenic 50.0%
GGCTACACAACAGTCTTCCA+CGG - chr7_1:64282438-64282457 None:intergenic 50.0%
CTTAATCTCCGTAGGCCAGT+TGG - chr7_1:64282469-64282488 None:intergenic 50.0%
GAGTCTTGGGTGTTAGACTC+TGG - chr7_1:64282678-64282697 None:intergenic 50.0%
GGAGAGCAAGGAAGAGTCTT+GGG - chr7_1:64282691-64282710 None:intergenic 50.0%
TGGAGAGCAAGGAAGAGTCT+TGG - chr7_1:64282692-64282711 None:intergenic 50.0%
! AATGTTGCTTCCACCTCAGG+AGG - chr7_1:64282738-64282757 None:intergenic 50.0%
! GCAAATGTTGCTTCCACCTC+AGG - chr7_1:64282741-64282760 None:intergenic 50.0%
GAGATCAGACGGAGAGAGTT+GGG - chr7_1:64282981-64283000 None:intergenic 50.0%
AGAGATCAGACGGAGAGAGT+TGG - chr7_1:64282982-64283001 None:intergenic 50.0%
ACAGTAGCGCTCCAACTATC+TGG + chr7_1:64283074-64283093 Msa1030280:intron 50.0%
TAGCGCTCCAACTATCTGGT+AGG + chr7_1:64283078-64283097 Msa1030280:intron 50.0%
AGCGCTCCAACTATCTGGTA+GGG + chr7_1:64283079-64283098 Msa1030280:intron 50.0%
TGAGGCGGTTGTTTACGCTT+CGG - chr7_1:64283223-64283242 None:intergenic 50.0%
!! AACCACCGCTGGTCTTATGA+AGG - chr7_1:64283297-64283316 None:intergenic 50.0%
GCAAAAGAGAAAACCACCGC+TGG - chr7_1:64283308-64283327 None:intergenic 50.0%
!!! ATGGTGCGGACTTTGGCTTT+TGG - chr7_1:64283490-64283509 None:intergenic 50.0%
AAGTTCGATGGTGCGGACTT+TGG - chr7_1:64283497-64283516 None:intergenic 50.0%
TATGGCTGCAGACGAAGGAA+AGG - chr7_1:64283531-64283550 None:intergenic 50.0%
ACAACTGGTATCAGAGCTCC+TGG - chr7_1:64283739-64283758 None:intergenic 50.0%
GGCCAATAATGCCTACTCTC+CGG + chr7_1:64279123-64279142 Msa1030280:intron 50.0%
GTCCGGAGAGTAGGCATTAT+TGG - chr7_1:64279128-64279147 None:intergenic 50.0%
AAAGATCTGCAGCAGCAGTC+CGG - chr7_1:64279145-64279164 None:intergenic 50.0%
! CCTGGGTGTAATTGGGTTGT+GGG - chr7_1:64279216-64279235 None:intergenic 50.0%
! TCCTGGGTGTAATTGGGTTG+TGG - chr7_1:64279217-64279236 None:intergenic 50.0%
CGTGAAGCAGCAAAAGGTGA+AGG - chr7_1:64279449-64279468 None:intergenic 50.0%
!! TCACCTTTTGCTGCTTCACG+TGG + chr7_1:64279449-64279468 Msa1030280:intron 50.0%
CAACCACGTGAAGCAGCAAA+AGG - chr7_1:64279455-64279474 None:intergenic 50.0%
!! CTTTTGCTGCTTCACGTGGT+TGG + chr7_1:64279453-64279472 Msa1030280:intron 50.0%
CGCCTCAAGTTCCTCCTTTA+CGG - chr7_1:64285316-64285335 None:intergenic 50.0%
CGTAAAGGAGGAACTTGAGG+CGG + chr7_1:64285314-64285333 Msa1030280:CDS 50.0%
GTGAAAGGACTAATGTGCCG+AGG - chr7_1:64286191-64286210 None:intergenic 50.0%
TGGGCGTCAATGCTAGCAAC+TGG + chr7_1:64277775-64277794 Msa1030280:intron 55.0%
ACTCTGATGAATCGGGTGCG+AGG + chr7_1:64278008-64278027 Msa1030280:intron 55.0%
CCCACAACCCAATTACACCC+AGG + chr7_1:64279213-64279232 Msa1030280:intron 55.0%
GTGGGAGATTGTTGGTGTGC+AGG - chr7_1:64279573-64279592 None:intergenic 55.0%
AGAAGGCTGCTGCATGATCG+AGG - chr7_1:64279625-64279644 None:intergenic 55.0%
GATCATGCAGCAGCCTTCTC+TGG + chr7_1:64279626-64279645 Msa1030280:intron 55.0%
CCAGACATTGGCCATGCAGT+GGG - chr7_1:64280239-64280258 None:intergenic 55.0%
GTCTGTACGAGGCCAGACAT+TGG - chr7_1:64280251-64280270 None:intergenic 55.0%
CTTGCCAACGGTGTGCTAAC+CGG + chr7_1:64280377-64280396 Msa1030280:intron 55.0%
CAAACCGGTTAGCACACCGT+TGG - chr7_1:64280384-64280403 None:intergenic 55.0%
CAACGGTGTGCTAACCGGTT+TGG + chr7_1:64280382-64280401 Msa1030280:intron 55.0%
CAACATGGGCGATGCCAAAC+CGG - chr7_1:64280399-64280418 None:intergenic 55.0%
GGAACTGGAGTAGGATGCAC+TGG + chr7_1:64281280-64281299 Msa1030280:intron 55.0%
! GGATGCACTGGTGTGTCAGA+TGG + chr7_1:64281292-64281311 Msa1030280:intron 55.0%
AACACAACCACCAACGGCTC+AGG - chr7_1:64281418-64281437 None:intergenic 55.0%
TGAGTTTGGCTACCGCCTCT+GGG - chr7_1:64281515-64281534 None:intergenic 55.0%
ATGAGTTTGGCTACCGCCTC+TGG - chr7_1:64281516-64281535 None:intergenic 55.0%
AGAAGCTTGCGTGTGCAGTC+AGG - chr7_1:64281772-64281791 None:intergenic 55.0%
TGACTGCACACGCAAGCTTC+TGG + chr7_1:64281771-64281790 Msa1030280:intron 55.0%
CGACAGTCCCATCCATTGGT+GGG - chr7_1:64282086-64282105 None:intergenic 55.0%
ACGACAGTCCCATCCATTGG+TGG - chr7_1:64282087-64282106 None:intergenic 55.0%
CCAACGACAGTCCCATCCAT+TGG - chr7_1:64282090-64282109 None:intergenic 55.0%
CCAATGGATGGGACTGTCGT+TGG + chr7_1:64282087-64282106 Msa1030280:intron 55.0%
GGTGCAATGACGATAGCTCG+CGG - chr7_1:64282393-64282412 None:intergenic 55.0%
TGTAGCCTTCGTCAGCCAAC+TGG + chr7_1:64282451-64282470 Msa1030280:intron 55.0%
! TTCGTCAGCCAACTGGCCTA+CGG + chr7_1:64282458-64282477 Msa1030280:intron 55.0%
CCAACCAGAGGAAATGGACG+TGG - chr7_1:64282909-64282928 None:intergenic 55.0%
CCACGTCCATTTCCTCTGGT+TGG + chr7_1:64282906-64282925 Msa1030280:intron 55.0%
ACAGCTGTGAGTAGCTCCTC+GGG - chr7_1:64283053-64283072 None:intergenic 55.0%
CACAGCTGTGAGTAGCTCCT+CGG - chr7_1:64283054-64283073 None:intergenic 55.0%
! GATGACAGAAGGCGCATCAG+TGG - chr7_1:64283201-64283220 None:intergenic 55.0%
AGCCTTCATAAGACCAGCGG+TGG + chr7_1:64283292-64283311 Msa1030280:intron 55.0%
GGAGTTATGGCTGCAGACGA+AGG - chr7_1:64283536-64283555 None:intergenic 55.0%
TGGTATCAGAGCTCCTGGCT+CGG - chr7_1:64283734-64283753 None:intergenic 55.0%
CCCACAACCCAATTACACCC+AGG + chr7_1:64279213-64279232 Msa1030280:intron 55.0%
AAGTTGCAGCAGCTGAGGCA+TGG + chr7_1:64285892-64285911 Msa1030280:CDS 55.0%
! GGCATGGATTGAAGCGCTCA+AGG + chr7_1:64285908-64285927 Msa1030280:CDS 55.0%
AGGACTAATGTGCCGAGGTG+CGG - chr7_1:64286186-64286205 None:intergenic 55.0%
CCCACTGCATGGCCAATGTC+TGG + chr7_1:64280236-64280255 Msa1030280:intron 60.0%
GCCAGACATTGGCCATGCAG+TGG - chr7_1:64280240-64280259 None:intergenic 60.0%
CTCGCTCAATCCTGAGCCGT+TGG + chr7_1:64281405-64281424 Msa1030280:intron 60.0%
GCTCAATCCTGAGCCGTTGG+TGG + chr7_1:64281408-64281427 Msa1030280:intron 60.0%
!! CCAATGGCACCGATGGACCT+CGG + chr7_1:64281692-64281711 Msa1030280:intron 60.0%
CCAGGCACTCCCCAACACAA+TGG - chr7_1:64281835-64281854 None:intergenic 60.0%
!! CCATTGTGTTGGGGAGTGCC+TGG + chr7_1:64281832-64281851 Msa1030280:intron 60.0%
GTAGGCCAGTTGGCTGACGA+AGG - chr7_1:64282459-64282478 None:intergenic 60.0%
GTTGCTTCCACCTCAGGAGG+AGG - chr7_1:64282735-64282754 None:intergenic 60.0%
AGAAGCCGCATCTGCTGCAG+AGG + chr7_1:64285506-64285525 Msa1030280:CDS 60.0%
GGACTAATGTGCCGAGGTGC+GGG - chr7_1:64286185-64286204 None:intergenic 60.0%
GCAGCAGCAGTCCGGAGAGT+AGG - chr7_1:64279137-64279156 None:intergenic 65.0%
!! CCGAGGTCCATCGGTGCCAT+TGG - chr7_1:64281695-64281714 None:intergenic 65.0%
CAACGCGTCACCTCCTCCTG+AGG + chr7_1:64282722-64282741 Msa1030280:intron 65.0%
GCAGCAGCAGTCCGGAGAGT+AGG - chr7_1:64279137-64279156 None:intergenic 65.0%
AGCGCTCAAGGCGAGCGAGA+AGG + chr7_1:64285920-64285939 Msa1030280:CDS 65.0%
! CTGCTGCTTCACCCGCACCT+CGG + chr7_1:64286171-64286190 Msa1030280:CDS 65.0%
CGCGTCACCTCCTCCTGAGG+TGG + chr7_1:64282725-64282744 Msa1030280:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 64276257 64286548 64276257 ID=Msa1030280;Name=Msa1030280
chr7_1 mRNA 64276257 64286548 64276257 ID=Msa1030280-mRNA-1;Parent=Msa1030280;Name=Msa1030280-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0|0.25|0.5|1|1|4|259|597
chr7_1 exon 64276257 64276264 64276257 ID=Msa1030280-mRNA-1:exon:14063;Parent=Msa1030280-mRNA-1
chr7_1 exon 64278827 64278832 64278827 ID=Msa1030280-mRNA-1:exon:14064;Parent=Msa1030280-mRNA-1
chr7_1 exon 64278878 64278908 64278878 ID=Msa1030280-mRNA-1:exon:14065;Parent=Msa1030280-mRNA-1
chr7_1 exon 64284541 64286548 64284541 ID=Msa1030280-mRNA-1:exon:14066;Parent=Msa1030280-mRNA-1
chr7_1 CDS 64276257 64276264 64276257 ID=Msa1030280-mRNA-1:cds;Parent=Msa1030280-mRNA-1
chr7_1 CDS 64278827 64278832 64278827 ID=Msa1030280-mRNA-1:cds;Parent=Msa1030280-mRNA-1
chr7_1 CDS 64278878 64278908 64278878 ID=Msa1030280-mRNA-1:cds;Parent=Msa1030280-mRNA-1
chr7_1 CDS 64284541 64286289 64284541 ID=Msa1030280-mRNA-1:cds;Parent=Msa1030280-mRNA-1
chr7_1 three_prime_UTR 64286290 64286548 64286290 ID=Msa1030280-mRNA-1:three_prime_utr;Parent=Msa1030280-mRNA-1
Gene Sequence

>Msa1030280

ATGTCATGGATAAATTTTGGCAAAAGATGGATGATACTAAAGTTGAACCCTACTTCAAGAACAAGAGAACTACACCAAGCTAGAAGAGACATTGGAAGGTACAAAGAGAGTAGATGGACAGCAGAATCTGCAAAATCTCAAGCTGAATCTGAGCTTTCAAATGCTAAAAAGACAATGAAAAATCTCTCTTCTATGATTGAGGAATCAAGTTACAAAGCTAAGGCGAAAATGAAGGACATAGAAACATTAGAGAAGGGAAAAGGTCAACATGGTGCTATAGTTGTAAGGAGGAATGAGAATTATGAGTATGCACAAGTGATGAGAGAATTGGAATATCTCAAAAAGGAATTGTTTAAGCTAAAGCTTGACGTGGCTTCTGTTTTGCAAGAGAAATCGCGGGCCGAGAAAGAAATCGAAGCATCAAGCTCGAAGATGATCGATTGTTCAAGAAAAGAAGAAGTACTGAGAAAGGAGATTGAAGAAGCCAATGAAGAACAAGTACTTGCTGAATTGGCCAGGATTGAAGCTTTGAAAGAGTTGGAGGATATTAGAGTTCAAAGAGAAAGAGAAGCAAATGAGTTCTCATTCAAATTGGAAAACACAAGAAAAAAGTTAAAGGAGGCCACGGAAGAGATAGACAAATCAAAGGAACTTGAAATGAAATTAGCTATGACAGTTTCAGATGTTGATCTGTTGCAGATTCAATTGAATTTGGTCAAAGAAATGGAGAAAAGGGTTCAAGGAGATGAAAGTGTGAAACTATTGGAAGGAAGTTTAAGAAAGGGTGACGAATCAGGAGACTCTACCGAGTTACAAACCGTAAAGGAGGAACTTGAGGCGGCAACGAAAGAATTAGCTTTGATTAGAGATGAAGGTTTTCAGTTCATGGCTTCTATGGATGTTATAAGAAATGAGCTGAAGCATGTAACTAAGGAAATCGCTCGCTTGAAGAAAAACGATTCGTCGGTTCAAAATCTCAATTCAAAGGTTCTAAGAACAAAATCTAAGCTAGAAGCCGCATCTGCTGCAGAGGAAAAAGCGAGATCATTAGTAGTTAGTCTATCTCATTCTCTTGAGACTCTGAAGAAAGAAACAGATGAAGCTAAAACGGAAAAAGAGCTCATATCTCAAGATATTATAACAACTAAGTTGGAAATCGAAAAAACTGAGTTTGAGATCGATACGAGTGAGGAAAAATTGCAAGGCGTTATGAAAGAGTTAGAAGAAGCAAAAACAACTGAAGCTTTAGCTTTGGAGAAGCTTAAAACACTTTCTGAGACTACTATGAAAGAAAGAGCTTTAACAGCAAAACATAGTTCATCGATTACTATCTCCAAATTTGAATACGAGTATCTAACTAATCATGCAGCTGCAGCAGAAGATCTTGCTGATAAAAAAGTTGCAGCAGCTGAGGCATGGATTGAAGCGCTCAAGGCGAGCGAGAAGGAAATACTACTGGAAACAAAAATAGTTCAAAGAGAACTCAAAGAAAACATTTTGAAGGAAGAGAGGGAGGTTTACATCAAAGAGAAGATGGCTGCAAGAAGAGTTAGTAGTGAGGAGTTTGATAGAACAAGAAAACGCGAGAAGGATTCGTCGCAGAGAGCTATTTCTAGAAAGAGTATTAAATCAAATGGAAGTATGACTCCTGCTAAAAGAATCAAGTTTCAGAAGTCTGCTGCTTCACCCGCACCTCGGCACATTAGTCCTTTCACTCTTAAGAAGAGAAAGAAAGTTATCCCGAATTTGGCAAAGTTATTCAGTAGCAAGAAAAACACTATGCCTAAAGAGTAA

Protein sequence

>Msa1030280

MSWINFGKRWMILKLNPTSRTRELHQARRDIGRYKESRWTAESAKSQAESELSNAKKTMKNLSSMIEESSYKAKAKMKDIETLEKGKGQHGAIVVRRNENYEYAQVMRELEYLKKELFKLKLDVASVLQEKSRAEKEIEASSSKMIDCSRKEEVLRKEIEEANEEQVLAELARIEALKELEDIRVQREREANEFSFKLENTRKKLKEATEEIDKSKELEMKLAMTVSDVDLLQIQLNLVKEMEKRVQGDESVKLLEGSLRKGDESGDSTELQTVKEELEAATKELALIRDEGFQFMASMDVIRNELKHVTKEIARLKKNDSSVQNLNSKVLRTKSKLEAASAAEEKARSLVVSLSHSLETLKKETDEAKTEKELISQDIITTKLEIEKTEFEIDTSEEKLQGVMKELEEAKTTEALALEKLKTLSETTMKERALTAKHSSSITISKFEYEYLTNHAAAAEDLADKKVAAAEAWIEALKASEKEILLETKIVQRELKENILKEEREVYIKEKMAARRVSSEEFDRTRKREKDSSQRAISRKSIKSNGSMTPAKRIKFQKSAASPAPRHISPFTLKKRKKVIPNLAKLFSSKKNTMPKE*