AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159220 MtrunA17_Chr1g0171521 94.340 265 14 1 1 265 1 264 3.43e-175 491
Msa0159220 MtrunA17_Chr1g0171511 99.065 107 1 0 338 444 1 107 5.56e-70 217
Msa0159220 MtrunA17_Chr4g0067911 49.474 190 92 3 103 291 144 330 8.95e-50 172
Msa0159220 MtrunA17_Chr4g0033621 52.601 173 80 1 120 292 134 304 3.49e-48 170
Msa0159220 MtrunA17_Chr6g0449261 40.075 267 148 5 103 366 96 353 1.21e-38 147
Msa0159220 MtrunA17_Chr8g0391361 49.324 148 71 3 120 266 7 151 2.46e-36 131
Msa0159220 MtrunA17_Chr1g0187011 35.789 190 116 3 126 311 596 783 6.30e-28 117
Msa0159220 MtrunA17_Chr4g0071101 39.865 148 82 3 155 298 586 730 3.31e-25 108
Msa0159220 MtrunA17_Chr6g0451621 31.739 230 145 5 104 328 507 729 1.47e-24 107
Msa0159220 MtrunA17_Chr6g0484411 36.111 180 109 3 122 297 583 760 4.00e-20 93.6
Msa0159220 MtrunA17_Chr2g0330811 38.194 144 81 4 132 270 569 709 3.52e-16 81.3
Msa0159220 MtrunA17_Chr8g0391141 31.737 167 103 3 107 270 437 595 3.35e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159220 AT3G25440.1 54.725 455 157 11 18 444 11 444 2.40e-145 422
Msa0159220 AT3G25440.2 59.847 391 130 8 60 444 11 380 2.76e-143 414
Msa0159220 AT3G25440.4 58.900 309 103 6 139 444 2 289 1.74e-115 340
Msa0159220 AT3G25440.3 58.900 309 103 6 139 444 2 289 1.74e-115 340
Msa0159220 AT3G25440.5 58.900 309 103 6 139 444 2 289 1.74e-115 340
Msa0159220 AT2G28480.1 49.727 183 88 2 110 292 117 295 6.49e-48 169
Msa0159220 AT4G13070.1 45.498 211 106 3 80 283 97 305 9.58e-48 167
Msa0159220 AT3G27550.2 47.701 174 89 1 117 290 106 277 1.87e-37 144
Msa0159220 AT3G27550.3 47.701 174 89 1 117 290 50 221 2.68e-37 142
Msa0159220 AT3G27550.1 47.701 174 89 1 117 290 50 221 2.68e-37 142
Msa0159220 AT3G23070.1 36.313 179 97 6 126 298 611 778 1.25e-24 107
Msa0159220 AT3G18390.1 36.316 190 115 3 122 307 615 802 1.80e-24 107
Msa0159220 AT4G29750.1 34.715 193 118 3 120 309 611 798 2.19e-24 107
Msa0159220 AT4G29750.2 34.715 193 118 3 120 309 611 798 2.36e-24 106
Msa0159220 AT4G14510.1 35.227 176 103 3 126 298 638 805 3.27e-24 106
Msa0159220 AT3G01370.1 31.068 206 133 4 112 310 528 731 1.93e-21 98.2
Msa0159220 AT5G16180.1 31.210 157 104 2 150 303 563 718 2.37e-15 79.0

Find 97 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCACTTTGTCACTTATT+TGG 0.094749 1_4:-29192520 None:intergenic
GGAGGAGAAACCTCTTTATT+TGG 0.187927 1_4:+29192721 Msa0159220:CDS
AATGGTTTATCTTCAATAAA+TGG 0.201704 1_4:-29193024 None:intergenic
TCATGATTATACTTCGAAAA+TGG 0.229572 1_4:-29189857 None:intergenic
GGTTCAATTGATGGCGTTCC+TGG 0.254372 1_4:-29189787 None:intergenic
AAACGAAGTACCTTCTTTCT+TGG 0.258185 1_4:-29191605 None:intergenic
TTCGAGCTCTTGCTCGAGTT+TGG 0.272822 1_4:-29192438 None:intergenic
CTGGTCAACTTCATCAAACT+TGG 0.324429 1_4:-29192855 None:intergenic
CATTGGATAAATCAAAATAT+AGG 0.327693 1_4:+29192384 Msa0159220:CDS
AGATTCAGATACAGAGGATT+TGG 0.340696 1_4:+29192694 Msa0159220:CDS
GGCACATATGGACTCTGATT+TGG 0.341724 1_4:+29192634 Msa0159220:CDS
TCGAGCTCTTGCTCGAGTTT+GGG 0.352265 1_4:-29192437 None:intergenic
CTTTATCTAGTTTCTCTAGT+TGG 0.373283 1_4:-29192568 None:intergenic
AGAAGAAGAAAGAGTTTCAA+AGG 0.389725 1_4:+29189990 Msa0159220:CDS
ATTGGATAAATCAAAATATA+GGG 0.392763 1_4:+29192385 Msa0159220:CDS
CTCGGAGGATGAGGCACATA+TGG 0.401335 1_4:+29192622 Msa0159220:CDS
CTATCAACTACGGATGTGTT+TGG 0.402757 1_4:+29193085 Msa0159220:three_prime_UTR
TAAGAAAGTGGTAGAGGAGT+AGG 0.416350 1_4:-29189572 None:intergenic
ATGCAGCACGTAGGAAAATC+TGG 0.421146 1_4:-29192874 None:intergenic
AACGAAGTACCTTCTTTCTT+GGG 0.425508 1_4:-29191604 None:intergenic
ATAGCAGATAGTATATTTGA+AGG 0.431812 1_4:+29192985 Msa0159220:three_prime_UTR
ACTGAGCTGGCAAGATTGAC+TGG 0.443729 1_4:+29191479 Msa0159220:CDS
TAAATTCCTCTTCTTCCAAC+TGG 0.446845 1_4:-29191356 None:intergenic
TTAAATTCGTCCAAATAAAG+AGG 0.451757 1_4:-29192731 None:intergenic
ACATCACCATCAGAATCCTT+AGG 0.451775 1_4:-29189896 None:intergenic
TTCGAAGTATAATCATGATA+AGG 0.457159 1_4:+29189862 Msa0159220:CDS
TAGAAGGAAGGTTCAATTGA+TGG 0.466408 1_4:-29189796 None:intergenic
CCTACTCGTGTAGAAGTAGA+AGG 0.468381 1_4:-29189812 None:intergenic
GTCACGACCCACGGCGGTGG+AGG 0.481911 1_4:-29189486 None:intergenic
CTCGTCACGACCCACGGCGG+TGG 0.484612 1_4:-29189489 None:intergenic
TGGAGATTTGAAACACTACT+TGG 0.485963 1_4:-29192548 None:intergenic
GTTGATAGTACTTGTCAGAA+AGG 0.489926 1_4:-29193070 None:intergenic
AACGACGAGGAGAAAATTGA+AGG 0.494552 1_4:+29189925 Msa0159220:CDS
CAACGGTTGCTCGGAGGATG+AGG 0.494561 1_4:+29192613 Msa0159220:CDS
TTGATAGTACTTGTCAGAAA+GGG 0.496180 1_4:-29193069 None:intergenic
ATTGTTTCTGATGATTCTGT+AGG 0.503591 1_4:-29191257 None:intergenic
TCTAAAATTACATTAGCTCA+TGG 0.511955 1_4:-29193119 None:intergenic
ACTACGGATGTGTTTGGATG+AGG 0.512958 1_4:+29193091 Msa0159220:three_prime_UTR
GCGTCAATATCTCAGGATCA+TGG 0.513687 1_4:-29191280 None:intergenic
TAAGGAGATTGCCACTGAGC+TGG 0.515928 1_4:+29191466 Msa0159220:CDS
TCTTCTGGCGTCAATATCTC+AGG 0.519559 1_4:-29191287 None:intergenic
AGATAGTATATTTGAAGGAG+AGG 0.524977 1_4:+29192990 Msa0159220:three_prime_UTR
CTTGAACTATGTTATATGCA+AGG 0.525833 1_4:+29189757 Msa0159220:CDS
AGATACAGAGGATTTGGTAA+AGG 0.527087 1_4:+29192700 Msa0159220:CDS
CTAGAGAAACTAGATAAAGT+TGG 0.528664 1_4:+29192572 Msa0159220:CDS
GCGAAGTAAGAAAGTGGTAG+AGG 0.531779 1_4:-29189578 None:intergenic
TAATGATAACAACGGTTGCT+CGG 0.533853 1_4:+29192604 Msa0159220:CDS
GTTCAATTGATGGCGTTCCT+GGG 0.539200 1_4:-29189786 None:intergenic
CTCTCTCTCGTCACGACCCA+CGG 0.539954 1_4:-29189495 None:intergenic
TACAGAGGATTTGGTAAAGG+AGG 0.540667 1_4:+29192703 Msa0159220:CDS
GTATCCCCATCACTTTGCTC+CGG 0.541643 1_4:-29192761 None:intergenic
TATGTGCCAGTTGGAAGAAG+AGG 0.545414 1_4:+29191350 Msa0159220:CDS
CGTGGAGACATTATCTCTGT+TGG 0.551066 1_4:-29191572 None:intergenic
CTACGGATGTGTTTGGATGA+GGG 0.551905 1_4:+29193092 Msa0159220:three_prime_UTR
TTGACTGGAGGTATAGTGCT+TGG 0.552204 1_4:+29191494 Msa0159220:CDS
TATATGCAAGGTTTATGCCC+AGG 0.555086 1_4:+29189769 Msa0159220:CDS
GTATCTGCCTCCACCGCCGT+GGG 0.559416 1_4:+29189479 Msa0159220:five_prime_UTR
ATGGAGTTGAATGAAAACTT+AGG 0.559747 1_4:-29189838 None:intergenic
GGAGACATTATCTCTGTTGG+TGG 0.560050 1_4:-29191569 None:intergenic
CCTTCTACTTCTACACGAGT+AGG 0.569886 1_4:+29189812 Msa0159220:CDS
AAGTGAAATTTATTGACAAG+CGG 0.580154 1_4:-29189544 None:intergenic
TGGTCAACTTCATCAAACTT+GGG 0.584058 1_4:-29192854 None:intergenic
AGTATCTGCCTCCACCGCCG+TGG 0.586470 1_4:+29189478 Msa0159220:five_prime_UTR
TAAGGTCGTAGAACAACCTA+AGG 0.588611 1_4:+29189880 Msa0159220:CDS
TCTTACTTCGCCGCAAAACA+AGG 0.589761 1_4:+29189590 Msa0159220:CDS
GCATGTTCAAAATTACACCT+TGG 0.591409 1_4:-29191379 None:intergenic
AGTCACTCTCCCAAGAAAGA+AGG 0.593405 1_4:+29191595 Msa0159220:CDS
GATAAATCAAAATATAGGGA+TGG 0.594284 1_4:+29192389 Msa0159220:CDS
ACGACGAGGAGAAAATTGAA+GGG 0.594388 1_4:+29189926 Msa0159220:CDS
TGAGACAGATTCAGATACAG+AGG 0.595778 1_4:+29192688 Msa0159220:CDS
TGATAGTACTTGTCAGAAAG+GGG 0.600938 1_4:-29193068 None:intergenic
ACACAATAATAATGTACAGA+GGG 0.600941 1_4:+29191531 Msa0159220:CDS
GTCGTGACGAGAGAGAGAAA+TGG 0.606791 1_4:+29189501 Msa0159220:exon
CTGACAAGTACTATCAACTA+CGG 0.612249 1_4:+29193075 Msa0159220:three_prime_UTR
GACGAGAGAGAGAAATGGCG+TGG 0.612355 1_4:+29189506 Msa0159220:exon
CTCGTGTAGAAGTAGAAGGA+AGG 0.614601 1_4:-29189808 None:intergenic
ACATCAAACTTTGCAAGTGG+TGG 0.616673 1_4:+29191418 Msa0159220:CDS
GAACAACCTAAGGATTCTGA+TGG 0.619651 1_4:+29189890 Msa0159220:CDS
AGTGCTTGGCATTCATGAAG+AGG 0.621574 1_4:+29191508 Msa0159220:CDS
GAAACATCAAACTTTGCAAG+TGG 0.622225 1_4:+29191415 Msa0159220:CDS
TTTCTTGGGAGAGTGACTCG+TGG 0.625433 1_4:-29191590 None:intergenic
AGTAACACAGAAGCAGCTGA+AGG 0.637950 1_4:+29192494 Msa0159220:CDS
TTTGCGGCGAAGTAAGAAAG+TGG 0.644628 1_4:-29189584 None:intergenic
GGGATGGCCTCCGCGCTGTG+AGG 0.644794 1_4:+29192405 Msa0159220:CDS
GGAAGAAGAGGAATTTACCA+AGG 0.659024 1_4:+29191362 Msa0159220:CDS
GATAGTACTTGTCAGAAAGG+GGG 0.664901 1_4:-29193067 None:intergenic
GACACAATAATAATGTACAG+AGG 0.674037 1_4:+29191530 Msa0159220:CDS
GAGAGAGAGAAATGGCGTGG+AGG 0.674140 1_4:+29189509 Msa0159220:exon
AGTCAATCTTGCCAGCTCAG+TGG 0.683540 1_4:-29191477 None:intergenic
TGATAACAACGGTTGCTCGG+AGG 0.692533 1_4:+29192607 Msa0159220:CDS
GTTTCAAAGGATGACAACAG+AGG 0.702630 1_4:+29190003 Msa0159220:CDS
TATATCTCCTCACAGCGCGG+AGG 0.707405 1_4:-29192412 None:intergenic
GAGCTGGCAAGATTGACTGG+AGG 0.723328 1_4:+29191482 Msa0159220:CDS
GAATATATCTCCTCACAGCG+CGG 0.729557 1_4:-29192415 None:intergenic
GTGATGTCAAAGTAACGACG+AGG 0.751106 1_4:+29189912 Msa0159220:CDS
GCAATGTTTAATGATAACAA+CGG 0.770118 1_4:+29192596 Msa0159220:CDS
TCTCTCGTCACGACCCACGG+CGG 0.779803 1_4:-29189492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATAATAATCATTTC+AGG + chr1_4:29189693-29189712 Msa0159220:intron 10.0%
!!! AATTTTATACAAGTTATTAA+AGG + chr1_4:29190030-29190049 Msa0159220:CDS 10.0%
!!! AATATGAAATCTTTAAAATA+AGG - chr1_4:29190161-29190180 None:intergenic 10.0%
!!! TACTTTTTGTTTTTAAATTA+CGG - chr1_4:29190238-29190257 None:intergenic 10.0%
!!! ATTGTAATTTTATAACTTTT+AGG - chr1_4:29190836-29190855 None:intergenic 10.0%
!!! ATTTTTATTTTTCAAAAGAA+GGG - chr1_4:29192042-29192061 None:intergenic 10.0%
!!! AATTTTTATTTTTCAAAAGA+AGG - chr1_4:29192043-29192062 None:intergenic 10.0%
!!! TCTTTTGAAAAATAAAAATT+TGG + chr1_4:29192043-29192062 Msa0159220:intron 10.0%
!!! ATTTCATATTTTTACTCTTA+GGG + chr1_4:29190171-29190190 Msa0159220:intron 15.0%
!! TATAAGTATCTAATCTTAAA+TGG + chr1_4:29190805-29190824 Msa0159220:intron 15.0%
!! ATTGGATAAATCAAAATATA+GGG + chr1_4:29192385-29192404 Msa0159220:CDS 15.0%
!!! TTTTTCTTTTTCTTTTTTGT+TGG + chr1_4:29192951-29192970 Msa0159220:three_prime_UTR 15.0%
!!! TTTTCTTTTTCTTTTTTGTT+GGG + chr1_4:29192952-29192971 Msa0159220:three_prime_UTR 15.0%
!!! TTTTTTTTTAGAATTCTTTG+AGG + chr1_4:29193186-29193205 Msa0159220:three_prime_UTR 15.0%
!!! TTAAAATAAGGTGTTAAAGT+AGG - chr1_4:29190149-29190168 None:intergenic 20.0%
!!! GATTTCATATTTTTACTCTT+AGG + chr1_4:29190170-29190189 Msa0159220:intron 20.0%
!! AGAGATAAAAACAAAAATGA+TGG - chr1_4:29191046-29191065 None:intergenic 20.0%
!!! GAATTATTTCTTTCTAATGT+AGG + chr1_4:29191187-29191206 Msa0159220:intron 20.0%
!!! ACACTTTTTCTTCTTAAAAA+TGG + chr1_4:29191310-29191329 Msa0159220:CDS 20.0%
!!! CACTTTTTCTTCTTAAAAAT+GGG + chr1_4:29191311-29191330 Msa0159220:CDS 20.0%
!! TGTGAATAAAAAAACAGATT+TGG + chr1_4:29191651-29191670 Msa0159220:intron 20.0%
!! AAATTTCTTCATACTATTCT+AGG + chr1_4:29191697-29191716 Msa0159220:intron 20.0%
!! AGTATGAAAAAGTTCAAAAT+TGG - chr1_4:29192304-29192323 None:intergenic 20.0%
!! CATTGGATAAATCAAAATAT+AGG + chr1_4:29192384-29192403 Msa0159220:CDS 20.0%
!! AATGGTTTATCTTCAATAAA+TGG - chr1_4:29193027-29193046 None:intergenic 20.0%
! AAGTGAAATTTATTGACAAG+CGG - chr1_4:29189547-29189566 None:intergenic 25.0%
!!! GAAATAAATACCTTGTTTTG+CGG - chr1_4:29189603-29189622 None:intergenic 25.0%
! TCATGATTATACTTCGAAAA+TGG - chr1_4:29189860-29189879 None:intergenic 25.0%
! TTCGAAGTATAATCATGATA+AGG + chr1_4:29189862-29189881 Msa0159220:CDS 25.0%
! CAACTTTATCAATAGACTAA+GGG - chr1_4:29190433-29190452 None:intergenic 25.0%
! ACAACTTTATCAATAGACTA+AGG - chr1_4:29190434-29190453 None:intergenic 25.0%
! AACAATGGTTAATGTTATCT+TGG + chr1_4:29190626-29190645 Msa0159220:intron 25.0%
!! ATTTTTACTGTCCTTTTTGA+AGG + chr1_4:29190692-29190711 Msa0159220:intron 25.0%
! AACTTGTAGATAGAAATTCT+AGG - chr1_4:29190723-29190742 None:intergenic 25.0%
! AGATTAGATACTTATATCAG+AGG - chr1_4:29190801-29190820 None:intergenic 25.0%
! AGTATCTAATCTTAAATGGA+AGG + chr1_4:29190809-29190828 Msa0159220:intron 25.0%
! TTATAACAGAAATATCAAGC+AGG - chr1_4:29190949-29190968 None:intergenic 25.0%
!! TGACAGCTTTGATTTAATAA+TGG - chr1_4:29190992-29191011 None:intergenic 25.0%
!!! AAAACAAAAATGATGGATCT+TGG - chr1_4:29191039-29191058 None:intergenic 25.0%
! ACACAATAATAATGTACAGA+GGG + chr1_4:29191531-29191550 Msa0159220:CDS 25.0%
! TGTTATTGACAGAATATCAA+TGG - chr1_4:29191817-29191836 None:intergenic 25.0%
! TTTATCAGCTTAAATGACAA+TGG - chr1_4:29191851-29191870 None:intergenic 25.0%
! TCGAAAAATAGTGATGTATT+TGG + chr1_4:29191919-29191938 Msa0159220:intron 25.0%
!!! TTTTTCAAAAGAAGGGTAAA+AGG - chr1_4:29192035-29192054 None:intergenic 25.0%
! AAACACGATACAATTAGAAA+TGG - chr1_4:29192070-29192089 None:intergenic 25.0%
! ATATACCATATATAGATCCA+AGG - chr1_4:29192216-29192235 None:intergenic 25.0%
! GATAAATCAAAATATAGGGA+TGG + chr1_4:29192389-29192408 Msa0159220:CDS 25.0%
! GCAATGTTTAATGATAACAA+CGG + chr1_4:29192596-29192615 Msa0159220:CDS 25.0%
! TTAAATTCGTCCAAATAAAG+AGG - chr1_4:29192734-29192753 None:intergenic 25.0%
!! GGACGAATTTAATAATTTTC+CGG + chr1_4:29192742-29192761 Msa0159220:CDS 25.0%
!! ATCATACAACTCTAAAAACA+TGG + chr1_4:29192814-29192833 Msa0159220:CDS 25.0%
!!! TTTTTCTTTTTTGTTGGGAA+GGG + chr1_4:29192957-29192976 Msa0159220:three_prime_UTR 25.0%
! ATAGCAGATAGTATATTTGA+AGG + chr1_4:29192985-29193004 Msa0159220:three_prime_UTR 25.0%
!!! AAAAGAGTTGATGGTTTTAA+TGG - chr1_4:29193045-29193064 None:intergenic 25.0%
!! TCTAAAATTACATTAGCTCA+TGG - chr1_4:29193122-29193141 None:intergenic 25.0%
!! ATGAGCTAATGTAATTTTAG+AGG + chr1_4:29193121-29193140 Msa0159220:three_prime_UTR 25.0%
!! TGAGCTAATGTAATTTTAGA+GGG + chr1_4:29193122-29193141 Msa0159220:three_prime_UTR 25.0%
CTTGAACTATGTTATATGCA+AGG + chr1_4:29189757-29189776 Msa0159220:CDS 30.0%
ATGGAGTTGAATGAAAACTT+AGG - chr1_4:29189841-29189860 None:intergenic 30.0%
AGAAGAAGAAAGAGTTTCAA+AGG + chr1_4:29189990-29190009 Msa0159220:CDS 30.0%
! ATTAAAGGTACACTCTCTTT+AGG + chr1_4:29190045-29190064 Msa0159220:intron 30.0%
TTTAGTGCAACTGATATTCT+TGG + chr1_4:29190578-29190597 Msa0159220:intron 30.0%
! TATCTTGGTTTCTTTTGTCT+TGG + chr1_4:29190641-29190660 Msa0159220:intron 30.0%
!!! TTTTGAAGTTTGTGTAGATC+AGG + chr1_4:29190858-29190877 Msa0159220:intron 30.0%
! AGCTTTGATTTAATAATGGC+AGG - chr1_4:29190988-29191007 None:intergenic 30.0%
ATTTCTTTCTAATGTAGGCT+CGG + chr1_4:29191192-29191211 Msa0159220:intron 30.0%
!! ATTGTTTCTGATGATTCTGT+AGG - chr1_4:29191260-29191279 None:intergenic 30.0%
!! AAGAAGAAAAAGTGTTCTTC+TGG - chr1_4:29191305-29191324 None:intergenic 30.0%
!! GCACATAATTTTTGCTTTTC+AGG - chr1_4:29191337-29191356 None:intergenic 30.0%
! TTTTGAACATGCATCTACAT+TGG + chr1_4:29191390-29191409 Msa0159220:CDS 30.0%
GACACAATAATAATGTACAG+AGG + chr1_4:29191530-29191549 Msa0159220:CDS 30.0%
!!! AAATTTTGAAACACCAACTC+AGG - chr1_4:29191683-29191702 None:intergenic 30.0%
TTTCCCAAAATGCTAATCTT+GGG - chr1_4:29191732-29191751 None:intergenic 30.0%
! TTTTCCCAAAATGCTAATCT+TGG - chr1_4:29191733-29191752 None:intergenic 30.0%
!! GATTAGCATTTTGGGAAAAT+TGG + chr1_4:29191734-29191753 Msa0159220:intron 30.0%
TAAAAGGAAGAAGATGCAAA+GGG - chr1_4:29192019-29192038 None:intergenic 30.0%
! TGAAGCAATCTTTTATTGTG+TGG - chr1_4:29192118-29192137 None:intergenic 30.0%
CTATAATTAACACATTGCAG+AGG - chr1_4:29192180-29192199 None:intergenic 30.0%
ATAGCATTTATTTGCAACCT+TGG + chr1_4:29192196-29192215 Msa0159220:intron 30.0%
AATAAAATGAGAGTAACCCA+AGG - chr1_4:29192360-29192379 None:intergenic 30.0%
! CTTTATCTAGTTTCTCTAGT+TGG - chr1_4:29192571-29192590 None:intergenic 30.0%
CTAGAGAAACTAGATAAAGT+TGG + chr1_4:29192572-29192591 Msa0159220:CDS 30.0%
!! CTTTTTCTTTTTTGTTGGGA+AGG + chr1_4:29192956-29192975 Msa0159220:three_prime_UTR 30.0%
!! TTTTCTTTTTTGTTGGGAAG+GGG + chr1_4:29192958-29192977 Msa0159220:three_prime_UTR 30.0%
AGATAGTATATTTGAAGGAG+AGG + chr1_4:29192990-29193009 Msa0159220:three_prime_UTR 30.0%
! TTGATAGTACTTGTCAGAAA+GGG - chr1_4:29193072-29193091 None:intergenic 30.0%
TAGAAGGAAGGTTCAATTGA+TGG - chr1_4:29189799-29189818 None:intergenic 35.0%
! TTTTACTCTTAGGGTGTGTT+TGG + chr1_4:29190180-29190199 Msa0159220:intron 35.0%
!! TTTACACAAAGGCTGTTTCT+AGG - chr1_4:29190487-29190506 None:intergenic 35.0%
ACAGCCTTTGTGTAAAAATC+AGG + chr1_4:29190491-29190510 Msa0159220:intron 35.0%
CAGCCTTTGTGTAAAAATCA+GGG + chr1_4:29190492-29190511 Msa0159220:intron 35.0%
! TTGCCCTGATTTTTACACAA+AGG - chr1_4:29190498-29190517 None:intergenic 35.0%
TTGCATACGATACACCAAAA+TGG + chr1_4:29190520-29190539 Msa0159220:intron 35.0%
! GTCTATACGAGTACTTGTTA+TGG - chr1_4:29190923-29190942 None:intergenic 35.0%
AACAGAAATATCAAGCAGGA+AGG - chr1_4:29190945-29190964 None:intergenic 35.0%
AGCAAAAATTATGTGCCAGT+TGG + chr1_4:29191341-29191360 Msa0159220:CDS 35.0%
TAAATTCCTCTTCTTCCAAC+TGG - chr1_4:29191359-29191378 None:intergenic 35.0%
GCATGTTCAAAATTACACCT+TGG - chr1_4:29191382-29191401 None:intergenic 35.0%
GAAACATCAAACTTTGCAAG+TGG + chr1_4:29191415-29191434 Msa0159220:CDS 35.0%
! AACGAAGTACCTTCTTTCTT+GGG - chr1_4:29191607-29191626 None:intergenic 35.0%
! AAACGAAGTACCTTCTTTCT+TGG - chr1_4:29191608-29191627 None:intergenic 35.0%
!! AAGAAAGAAGGTACTTCGTT+TGG + chr1_4:29191607-29191626 Msa0159220:intron 35.0%
! ATTCCCCAAGATTAGCATTT+TGG + chr1_4:29191725-29191744 Msa0159220:intron 35.0%
! TTCCCCAAGATTAGCATTTT+GGG + chr1_4:29191726-29191745 Msa0159220:intron 35.0%
TTCCCAAAATGCTAATCTTG+GGG - chr1_4:29191731-29191750 None:intergenic 35.0%
TTAGATACAACTCTCACAGT+CGG + chr1_4:29191874-29191893 Msa0159220:intron 35.0%
GTAAAAGGAAGAAGATGCAA+AGG - chr1_4:29192020-29192039 None:intergenic 35.0%
! AGCAATCTTTTATTGTGTGG+AGG - chr1_4:29192115-29192134 None:intergenic 35.0%
ATTAACACATTGCAGAGGTT+AGG - chr1_4:29192175-29192194 None:intergenic 35.0%
TGCAACCTTGGATCTATATA+TGG + chr1_4:29192208-29192227 Msa0159220:intron 35.0%
! GGGTTACTCTCATTTTATTC+AGG + chr1_4:29192361-29192380 Msa0159220:intron 35.0%
! CTCTCATTTTATTCAGGCAT+TGG + chr1_4:29192367-29192386 Msa0159220:intron 35.0%
! CACTCACTTTGTCACTTATT+TGG - chr1_4:29192523-29192542 None:intergenic 35.0%
! TGGAGATTTGAAACACTACT+TGG - chr1_4:29192551-29192570 None:intergenic 35.0%
TAATGATAACAACGGTTGCT+CGG + chr1_4:29192604-29192623 Msa0159220:CDS 35.0%
AGATTCAGATACAGAGGATT+TGG + chr1_4:29192694-29192713 Msa0159220:CDS 35.0%
! AGATACAGAGGATTTGGTAA+AGG + chr1_4:29192700-29192719 Msa0159220:CDS 35.0%
TGGTCAACTTCATCAAACTT+GGG - chr1_4:29192857-29192876 None:intergenic 35.0%
TTAAAAATGATGCAGCACGT+AGG - chr1_4:29192886-29192905 None:intergenic 35.0%
TGATAGTACTTGTCAGAAAG+GGG - chr1_4:29193071-29193090 None:intergenic 35.0%
!! GTTGATAGTACTTGTCAGAA+AGG - chr1_4:29193073-29193092 None:intergenic 35.0%
CTGACAAGTACTATCAACTA+CGG + chr1_4:29193075-29193094 Msa0159220:three_prime_UTR 35.0%
TAAGAAAGTGGTAGAGGAGT+AGG - chr1_4:29189575-29189594 None:intergenic 40.0%
TATATGCAAGGTTTATGCCC+AGG + chr1_4:29189769-29189788 Msa0159220:CDS 40.0%
TAAGGTCGTAGAACAACCTA+AGG + chr1_4:29189880-29189899 Msa0159220:CDS 40.0%
GAACAACCTAAGGATTCTGA+TGG + chr1_4:29189890-29189909 Msa0159220:CDS 40.0%
ACATCACCATCAGAATCCTT+AGG - chr1_4:29189899-29189918 None:intergenic 40.0%
AACGACGAGGAGAAAATTGA+AGG + chr1_4:29189925-29189944 Msa0159220:CDS 40.0%
ACGACGAGGAGAAAATTGAA+GGG + chr1_4:29189926-29189945 Msa0159220:CDS 40.0%
AGGGAAAAAGAGCTGTTGTA+AGG + chr1_4:29189945-29189964 Msa0159220:CDS 40.0%
GAAAAAGAGCTGTTGTAAGG+TGG + chr1_4:29189948-29189967 Msa0159220:CDS 40.0%
GTTTCAAAGGATGACAACAG+AGG + chr1_4:29190003-29190022 Msa0159220:CDS 40.0%
AAATGCTAGTGTCTCAGTGT+GGG + chr1_4:29190068-29190087 Msa0159220:intron 40.0%
! GCAAGTGTCTGAAACTAGAA+AGG - chr1_4:29190125-29190144 None:intergenic 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr1_4:29190188-29190207 Msa0159220:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr1_4:29190194-29190213 Msa0159220:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr1_4:29190198-29190217 Msa0159220:intron 40.0%
TTTGGATGGAGGATTTAGGA+GGG - chr1_4:29190406-29190425 None:intergenic 40.0%
TGTGTTTGGATGGAGGATTT+AGG - chr1_4:29190410-29190429 None:intergenic 40.0%
! CAATAGACTAAGGGTGTGTT+TGG - chr1_4:29190424-29190443 None:intergenic 40.0%
AAGTTGTTGTCACGTCTGAA+AGG + chr1_4:29190447-29190466 Msa0159220:intron 40.0%
GAAAGATATCTTCCAGCAAG+AGG + chr1_4:29190600-29190619 Msa0159220:intron 40.0%
TCCAGCAAGAGGATAAACAA+TGG + chr1_4:29190611-29190630 Msa0159220:intron 40.0%
ACCATTGTTTATCCTCTTGC+TGG - chr1_4:29190615-29190634 None:intergenic 40.0%
! TCTAGGATCGACCTTCAAAA+AGG - chr1_4:29190706-29190725 None:intergenic 40.0%
GTACTCTTAGAACACTTCGA+TGG + chr1_4:29190774-29190793 Msa0159220:intron 40.0%
CAAGCCAAGAGAACAACTAA+CGG - chr1_4:29190890-29190909 None:intergenic 40.0%
!! AATGATGGATCTTGGTGTGA+TGG - chr1_4:29191031-29191050 None:intergenic 40.0%
GGAAGAAGAGGAATTTACCA+AGG + chr1_4:29191362-29191381 Msa0159220:CDS 40.0%
ACATCAAACTTTGCAAGTGG+TGG + chr1_4:29191418-29191437 Msa0159220:CDS 40.0%
! ATTTTCAGCAGAGGAGGTTA+AGG + chr1_4:29191448-29191467 Msa0159220:CDS 40.0%
!! GATTTGGAGTTTTCCTGAGT+TGG + chr1_4:29191667-29191686 Msa0159220:intron 40.0%
TACAACCCATGGATTCATGA+CGG - chr1_4:29191781-29191800 None:intergenic 40.0%
TTGAGCAAGAATACAACCCA+TGG - chr1_4:29191792-29191811 None:intergenic 40.0%
TTGTGTGGAGGCAATCTTTA+GGG - chr1_4:29192103-29192122 None:intergenic 40.0%
ATTGTGTGGAGGCAATCTTT+AGG - chr1_4:29192104-29192123 None:intergenic 40.0%
! AGTTTAGAGTGGAGGCAAAT+AGG - chr1_4:29192145-29192164 None:intergenic 40.0%
TGAGACAGATTCAGATACAG+AGG + chr1_4:29192688-29192707 Msa0159220:CDS 40.0%
! TACAGAGGATTTGGTAAAGG+AGG + chr1_4:29192703-29192722 Msa0159220:CDS 40.0%
GGAGGAGAAACCTCTTTATT+TGG + chr1_4:29192721-29192740 Msa0159220:CDS 40.0%
! AATTTTCCGGAGCAAAGTGA+TGG + chr1_4:29192755-29192774 Msa0159220:CDS 40.0%
! ATTTTCCGGAGCAAAGTGAT+GGG + chr1_4:29192756-29192775 Msa0159220:CDS 40.0%
! TGGGGATACAGATGATTTTG+AGG + chr1_4:29192775-29192794 Msa0159220:CDS 40.0%
CTGGTCAACTTCATCAAACT+TGG - chr1_4:29192858-29192877 None:intergenic 40.0%
AAGGGGGAAAAAAGAGTTGA+TGG - chr1_4:29193054-29193073 None:intergenic 40.0%
GATAGTACTTGTCAGAAAGG+GGG - chr1_4:29193070-29193089 None:intergenic 40.0%
CTATCAACTACGGATGTGTT+TGG + chr1_4:29193085-29193104 Msa0159220:three_prime_UTR 40.0%
GCGAAGTAAGAAAGTGGTAG+AGG - chr1_4:29189581-29189600 None:intergenic 45.0%
TTTGCGGCGAAGTAAGAAAG+TGG - chr1_4:29189587-29189606 None:intergenic 45.0%
TCTTACTTCGCCGCAAAACA+AGG + chr1_4:29189590-29189609 Msa0159220:CDS 45.0%
!! GTTCAATTGATGGCGTTCCT+GGG - chr1_4:29189789-29189808 None:intergenic 45.0%
CTCGTGTAGAAGTAGAAGGA+AGG - chr1_4:29189811-29189830 None:intergenic 45.0%
CCTACTCGTGTAGAAGTAGA+AGG - chr1_4:29189815-29189834 None:intergenic 45.0%
CCTTCTACTTCTACACGAGT+AGG + chr1_4:29189812-29189831 Msa0159220:CDS 45.0%
GTGATGTCAAAGTAACGACG+AGG + chr1_4:29189912-29189931 Msa0159220:CDS 45.0%
GAAATGCTAGTGTCTCAGTG+TGG + chr1_4:29190067-29190086 Msa0159220:intron 45.0%
CTTAGGGTGTGTTTGGATTG+AGG + chr1_4:29190187-29190206 Msa0159220:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr1_4:29190197-29190216 Msa0159220:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr1_4:29190199-29190218 Msa0159220:intron 45.0%
TTGGATGGAGGATTTAGGAG+GGG - chr1_4:29190405-29190424 None:intergenic 45.0%
GTTTGGATGGAGGATTTAGG+AGG - chr1_4:29190407-29190426 None:intergenic 45.0%
! AGACTAAGGGTGTGTTTGGA+TGG - chr1_4:29190420-29190439 None:intergenic 45.0%
AAAATGGTGAGACCCCTTCT+CGG + chr1_4:29190536-29190555 Msa0159220:intron 45.0%
CTAAAGCTCCTGCATATGCA+GGG - chr1_4:29190563-29190582 None:intergenic 45.0%
ACTAAAGCTCCTGCATATGC+AGG - chr1_4:29190564-29190583 None:intergenic 45.0%
GCGTCAATATCTCAGGATCA+TGG - chr1_4:29191283-29191302 None:intergenic 45.0%
TCTTCTGGCGTCAATATCTC+AGG - chr1_4:29191290-29191309 None:intergenic 45.0%
TATGTGCCAGTTGGAAGAAG+AGG + chr1_4:29191350-29191369 Msa0159220:CDS 45.0%
! GGTGAAGACATTTTCAGCAG+AGG + chr1_4:29191439-29191458 Msa0159220:CDS 45.0%
! GAAGACATTTTCAGCAGAGG+AGG + chr1_4:29191442-29191461 Msa0159220:CDS 45.0%
! TTGACTGGAGGTATAGTGCT+TGG + chr1_4:29191494-29191513 Msa0159220:CDS 45.0%
AGTGCTTGGCATTCATGAAG+AGG + chr1_4:29191508-29191527 Msa0159220:CDS 45.0%
GGAGACATTATCTCTGTTGG+TGG - chr1_4:29191572-29191591 None:intergenic 45.0%
CGTGGAGACATTATCTCTGT+TGG - chr1_4:29191575-29191594 None:intergenic 45.0%
AGTCACTCTCCCAAGAAAGA+AGG + chr1_4:29191595-29191614 Msa0159220:CDS 45.0%
! TTTTCGCCGTCATGAATCCA+TGG + chr1_4:29191772-29191791 Msa0159220:intron 45.0%
TTTCGCCGTCATGAATCCAT+GGG + chr1_4:29191773-29191792 Msa0159220:intron 45.0%
TAGAGTGGAGGCAAATAGGA+AGG - chr1_4:29192141-29192160 None:intergenic 45.0%
TAGGCAAGGGAAGTTTAGAG+TGG - chr1_4:29192156-29192175 None:intergenic 45.0%
ACATTGCAGAGGTTAGGCAA+GGG - chr1_4:29192169-29192188 None:intergenic 45.0%
TAGTTCTCACTGTCTCTCCT+TGG + chr1_4:29192340-29192359 Msa0159220:intron 45.0%
AGTTCTCACTGTCTCTCCTT+GGG + chr1_4:29192341-29192360 Msa0159220:intron 45.0%
GAATATATCTCCTCACAGCG+CGG - chr1_4:29192418-29192437 None:intergenic 45.0%
AGTAACACAGAAGCAGCTGA+AGG + chr1_4:29192494-29192513 Msa0159220:CDS 45.0%
GGCACATATGGACTCTGATT+TGG + chr1_4:29192634-29192653 Msa0159220:CDS 45.0%
! TTTTCCGGAGCAAAGTGATG+GGG + chr1_4:29192757-29192776 Msa0159220:CDS 45.0%
ATGCAGCACGTAGGAAAATC+TGG - chr1_4:29192877-29192896 None:intergenic 45.0%
ACTACGGATGTGTTTGGATG+AGG + chr1_4:29193091-29193110 Msa0159220:three_prime_UTR 45.0%
CTACGGATGTGTTTGGATGA+GGG + chr1_4:29193092-29193111 Msa0159220:three_prime_UTR 45.0%
GTCGTGACGAGAGAGAGAAA+TGG + chr1_4:29189501-29189520 Msa0159220:exon 50.0%
!! GGTTCAATTGATGGCGTTCC+TGG - chr1_4:29189790-29189809 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr1_4:29190203-29190222 Msa0159220:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr1_4:29190204-29190223 Msa0159220:intron 50.0%
TGGAGGATTTAGGAGGGGAA+GGG - chr1_4:29190400-29190419 None:intergenic 50.0%
ATGGAGGATTTAGGAGGGGA+AGG - chr1_4:29190401-29190420 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGATGG+AGG - chr1_4:29190417-29190436 None:intergenic 50.0%
! GAGAAGGGGTCTCACCATTT+TGG - chr1_4:29190537-29190556 None:intergenic 50.0%
AGCGCCGTTAGTTGTTCTCT+TGG + chr1_4:29190883-29190902 Msa0159220:intron 50.0%
TAAGGAGATTGCCACTGAGC+TGG + chr1_4:29191466-29191485 Msa0159220:CDS 50.0%
AGTCAATCTTGCCAGCTCAG+TGG - chr1_4:29191480-29191499 None:intergenic 50.0%
ACTGAGCTGGCAAGATTGAC+TGG + chr1_4:29191479-29191498 Msa0159220:CDS 50.0%
TTTCTTGGGAGAGTGACTCG+TGG - chr1_4:29191593-29191612 None:intergenic 50.0%
! GCAAGGGAAGTTTAGAGTGG+AGG - chr1_4:29192153-29192172 None:intergenic 50.0%
CACATTGCAGAGGTTAGGCA+AGG - chr1_4:29192170-29192189 None:intergenic 50.0%
TCGAGCTCTTGCTCGAGTTT+GGG - chr1_4:29192440-29192459 None:intergenic 50.0%
TTCGAGCTCTTGCTCGAGTT+TGG - chr1_4:29192441-29192460 None:intergenic 50.0%
TGATAACAACGGTTGCTCGG+AGG + chr1_4:29192607-29192626 Msa0159220:CDS 50.0%
GTATCCCCATCACTTTGCTC+CGG - chr1_4:29192764-29192783 None:intergenic 50.0%
GACGAGAGAGAGAAATGGCG+TGG + chr1_4:29189506-29189525 Msa0159220:exon 55.0%
GAGAGAGAGAAATGGCGTGG+AGG + chr1_4:29189509-29189528 Msa0159220:exon 55.0%
GATTTAGGAGGGGAAGGGAG+GGG - chr1_4:29190395-29190414 None:intergenic 55.0%
GGATTTAGGAGGGGAAGGGA+GGG - chr1_4:29190396-29190415 None:intergenic 55.0%
AGGATTTAGGAGGGGAAGGG+AGG - chr1_4:29190397-29190416 None:intergenic 55.0%
CATATGCAGGGTCCGAGAAG+GGG - chr1_4:29190551-29190570 None:intergenic 55.0%
GCATATGCAGGGTCCGAGAA+GGG - chr1_4:29190552-29190571 None:intergenic 55.0%
TGCATATGCAGGGTCCGAGA+AGG - chr1_4:29190553-29190572 None:intergenic 55.0%
TTCTCGGACCCTGCATATGC+AGG + chr1_4:29190552-29190571 Msa0159220:intron 55.0%
GAGCTGGCAAGATTGACTGG+AGG + chr1_4:29191482-29191501 Msa0159220:CDS 55.0%
TATATCTCCTCACAGCGCGG+AGG - chr1_4:29192415-29192434 None:intergenic 55.0%
CTCGGAGGATGAGGCACATA+TGG + chr1_4:29192622-29192641 Msa0159220:CDS 55.0%
CTCTCTCTCGTCACGACCCA+CGG - chr1_4:29189498-29189517 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr1_4:29190207-29190226 Msa0159220:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr1_4:29190208-29190227 Msa0159220:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr1_4:29190209-29190228 Msa0159220:intron 60.0%
CAACGGTTGCTCGGAGGATG+AGG + chr1_4:29192613-29192632 Msa0159220:CDS 60.0%
AGTATCTGCCTCCACCGCCG+TGG + chr1_4:29189478-29189497 Msa0159220:five_prime_UTR 65.0%
GTATCTGCCTCCACCGCCGT+GGG + chr1_4:29189479-29189498 Msa0159220:five_prime_UTR 65.0%
TCTCTCGTCACGACCCACGG+CGG - chr1_4:29189495-29189514 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr1_4:29190212-29190231 Msa0159220:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr1_4:29190213-29190232 Msa0159220:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr1_4:29190213-29190232 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr1_4:29190212-29190231 None:intergenic 65.0%
GTCACGACCCACGGCGGTGG+AGG - chr1_4:29189489-29189508 None:intergenic 75.0%
CTCGTCACGACCCACGGCGG+TGG - chr1_4:29189492-29189511 None:intergenic 75.0%
GGGATGGCCTCCGCGCTGTG+AGG + chr1_4:29192405-29192424 Msa0159220:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 29189452 29193220 29189452 ID=Msa0159220;Name=Msa0159220
chr1_4 mRNA 29189452 29193220 29189452 ID=Msa0159220-mRNA-1;Parent=Msa0159220;Name=Msa0159220-mRNA-1;_AED=0.02;_eAED=0.02;_QI=68|1|1|1|1|1|4|298|444
chr1_4 exon 29189452 29189611 29189452 ID=Msa0159220-mRNA-1:exon:9471;Parent=Msa0159220-mRNA-1
chr1_4 exon 29189757 29190051 29189757 ID=Msa0159220-mRNA-1:exon:9472;Parent=Msa0159220-mRNA-1
chr1_4 exon 29191209 29191616 29191209 ID=Msa0159220-mRNA-1:exon:9473;Parent=Msa0159220-mRNA-1
chr1_4 exon 29192383 29193220 29192383 ID=Msa0159220-mRNA-1:exon:9474;Parent=Msa0159220-mRNA-1
chr1_4 five_prime_UTR 29189452 29189519 29189452 ID=Msa0159220-mRNA-1:five_prime_utr;Parent=Msa0159220-mRNA-1
chr1_4 CDS 29189520 29189611 29189520 ID=Msa0159220-mRNA-1:cds;Parent=Msa0159220-mRNA-1
chr1_4 CDS 29189757 29190051 29189757 ID=Msa0159220-mRNA-1:cds;Parent=Msa0159220-mRNA-1
chr1_4 CDS 29191209 29191616 29191209 ID=Msa0159220-mRNA-1:cds;Parent=Msa0159220-mRNA-1
chr1_4 CDS 29192383 29192922 29192383 ID=Msa0159220-mRNA-1:cds;Parent=Msa0159220-mRNA-1
chr1_4 three_prime_UTR 29192923 29193220 29192923 ID=Msa0159220-mRNA-1:three_prime_utr;Parent=Msa0159220-mRNA-1
Gene Sequence

>Msa0159220

ATGGCGTGGAGGATTTTGACATCACCGCTTGTCAATAAATTTCACTTCTTCTCCTACTCCTCTACCACTTTCTTACTTCGCCGCAAAACAAGCTTGAACTATGTTATATGCAAGGTTTATGCCCAGGAACGCCATCAATTGAACCTTCCTTCTACTTCTACACGAGTAGGATGCCTAAGTTTTCATTCAACTCCATTTTCGAAGTATAATCATGATAAGGTCGTAGAACAACCTAAGGATTCTGATGGTGATGTCAAAGTAACGACGAGGAGAAAATTGAAGGGAAAAAGAGCTGTTGTAAGGTGGCTTAAGTTCTTTAGATTTAAGAAGAAGAAAGAGTTTCAAAGGATGACAACAGAGGAAAGAATTTTATACAAGTTATTAAAGGCTCGGAAAAAAGAAGAGAGACTTCGCGAAGCTCTGAAGAAGATTGAGCCTACAGAATCATCAGAAACAATCCATGATCCTGAGATATTGACGCCAGAAGAACACTTTTTCTTCTTAAAAATGGGCCTGAAAAGCAAAAATTATGTGCCAGTTGGAAGAAGAGGAATTTACCAAGGTGTAATTTTGAACATGCATCTACATTGGAAGAAACATCAAACTTTGCAAGTGGTGGTGAAGACATTTTCAGCAGAGGAGGTTAAGGAGATTGCCACTGAGCTGGCAAGATTGACTGGAGGTATAGTGCTTGGCATTCATGAAGAGGACACAATAATAATGTACAGAGGGAAAAATTACTCTCAACCACCAACAGAGATAATGTCTCCACGAGTCACTCTCCCAAGAAAGAAGGCATTGGATAAATCAAAATATAGGGATGGCCTCCGCGCTGTGAGGAGATATATTCCCAAACTCGAGCAAGAGCTCGAAATTCTTCGAGCACAACTTCAAAGCACAGCTGAAAGTAACACAGAAGCAGCTGAAGGAATCCAAATAAGTGACAAAGTGAGTGTTGAACCAAGTAGTGTTTCAAATCTCCAACTAGAGAAACTAGATAAAGTTGGTGCAATGTTTAATGATAACAACGGTTGCTCGGAGGATGAGGCACATATGGACTCTGATTTGGATTCATATTCTGATAAATTATCAGACATCTTTGAGACAGATTCAGATACAGAGGATTTGGTAAAGGAGGAGAAACCTCTTTATTTGGACGAATTTAATAATTTTCCGGAGCAAAGTGATGGGGATACAGATGATTTTGAGGAGCATCTGCAACAAATATCATACAACTCTAAAAACATGGAAAAAGATGCTGACTTGCCCAAGTTTGATGAAGTTGACCAGATTTTCCTACGTGCTGCATCATTTTTAAAGAAAAAGAGAAAATGA
Protein sequence

>Msa0159220

MAWRILTSPLVNKFHFFSYSSTTFLLRRKTSLNYVICKVYAQERHQLNLPSTSTRVGCLSFHSTPFSKYNHDKVVEQPKDSDGDVKVTTRRKLKGKRAVVRWLKFFRFKKKKEFQRMTTEERILYKLLKARKKEERLREALKKIEPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQPPTEIMSPRVTLPRKKALDKSKYRDGLRAVRRYIPKLEQELEILRAQLQSTAESNTEAAEGIQISDKVSVEPSSVSNLQLEKLDKVGAMFNDNNGCSEDEAHMDSDLDSYSDKLSDIFETDSDTEDLVKEEKPLYLDEFNNFPEQSDGDTDDFEEHLQQISYNSKNMEKDADLPKFDEVDQIFLRAASFLKKKRK*