Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052640 | XP_003589050.2 | 96.207 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052640 | sp|Q38931|FKB62_ARATH | 53.042 | 526 | 237 | 5 | 27 | 546 | 29 | 550 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052640 | G7IBB7 | 96.207 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1125 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0052640 | 0.803495 | 3.391823e-49 | -8.615850e-47 |
| Msa0006040 | Msa0052640 | 0.828623 | 8.110343e-55 | -8.615850e-47 |
| Msa0012040 | Msa0052640 | 0.802221 | 6.217541e-49 | -8.615850e-47 |
| Msa0015610 | Msa0052640 | 0.819311 | 1.241605e-52 | -8.615850e-47 |
| Msa0020300 | Msa0052640 | 0.804732 | 1.875544e-49 | -8.615850e-47 |
| Msa0028660 | Msa0052640 | 0.824806 | 6.612797e-54 | -8.615850e-47 |
| Msa0033980 | Msa0052640 | 0.803174 | 3.953765e-49 | -8.615850e-47 |
| Msa0052640 | Msa0052770 | 0.985080 | 1.822394e-162 | -8.615850e-47 |
| Msa0052640 | Msa0054750 | 0.823208 | 1.567928e-53 | -8.615850e-47 |
| Msa0052640 | Msa0058300 | 0.834074 | 3.698873e-56 | -8.615850e-47 |
| Msa0052640 | Msa0081930 | 0.816467 | 5.448857e-52 | -8.615850e-47 |
| Msa0052640 | Msa0097780 | 0.946144 | 8.073171e-105 | -8.615850e-47 |
| Msa0052640 | Msa0113750 | 0.806265 | 8.946802e-50 | -8.615850e-47 |
| Msa0052640 | Msa0115270 | 0.808194 | 3.490496e-50 | -8.615850e-47 |
| Msa0052640 | Msa0128020 | 0.808870 | 2.503624e-50 | -8.615850e-47 |
| Msa0052640 | Msa0145730 | 0.811211 | 7.842693e-51 | -8.615850e-47 |
| Msa0052640 | Msa0159180 | 0.818695 | 1.713663e-52 | -8.615850e-47 |
| Msa0052640 | Msa0159220 | 0.810306 | 1.230771e-50 | -8.615850e-47 |
| Msa0052640 | Msa0160550 | 0.820365 | 7.129589e-53 | -8.615850e-47 |
| Msa0052640 | Msa0165660 | 0.804704 | 1.901297e-49 | -8.615850e-47 |
| Msa0052640 | Msa0255080 | 0.814377 | 1.588962e-51 | -8.615850e-47 |
| Msa0052640 | Msa0259370 | 0.800969 | 1.122958e-48 | -8.615850e-47 |
| Msa0052640 | Msa0279220 | 0.806728 | 7.146074e-50 | -8.615850e-47 |
| Msa0052640 | Msa0279240 | 0.800082 | 1.703151e-48 | -8.615850e-47 |
| Msa0052640 | Msa0309770 | 0.834622 | 2.694628e-56 | -8.615850e-47 |
| Msa0052640 | Msa0318980 | 0.813919 | 2.005518e-51 | -8.615850e-47 |
| Msa0052640 | Msa0345350 | 0.804817 | 1.800816e-49 | -8.615850e-47 |
| Msa0052640 | Msa0374750 | 0.817926 | 2.559329e-52 | -8.615850e-47 |
| Msa0052640 | Msa0379160 | 0.802896 | 4.512558e-49 | -8.615850e-47 |
| Msa0052640 | Msa0383800 | 0.811662 | 6.258200e-51 | -8.615850e-47 |
| Msa0052640 | Msa0388050 | 0.818734 | 1.679410e-52 | -8.615850e-47 |
| Msa0052640 | Msa0397540 | 0.810918 | 9.077571e-51 | -8.615850e-47 |
| Msa0052640 | Msa0424040 | 0.804903 | 1.727686e-49 | -8.615850e-47 |
| Msa0052640 | Msa0442200 | 0.808134 | 3.594886e-50 | -8.615850e-47 |
| Msa0052640 | Msa0477080 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0052640 | Msa0504020 | 0.806096 | 9.708222e-50 | -8.615850e-47 |
| Msa0052640 | Msa0510350 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa0052640 | Msa0520750 | 0.807689 | 4.469941e-50 | -8.615850e-47 |
| Msa0052640 | Msa0541360 | 0.813315 | 2.723312e-51 | -8.615850e-47 |
| Msa0052640 | Msa0593650 | 0.813731 | 2.206212e-51 | -8.615850e-47 |
| Msa0052640 | Msa0602390 | 0.822326 | 2.515153e-53 | -8.615850e-47 |
| Msa0052640 | Msa0606860 | 0.803751 | 3.001957e-49 | -8.615850e-47 |
| Msa0052640 | Msa0610430 | 0.831161 | 1.952558e-55 | -8.615850e-47 |
| Msa0052640 | Msa0621490 | 0.811155 | 8.066304e-51 | -8.615850e-47 |
| Msa0052640 | Msa0632870 | 0.800554 | 1.364666e-48 | -8.615850e-47 |
| Msa0052640 | Msa0636070 | 0.807830 | 4.172196e-50 | -8.615850e-47 |
| Msa0052640 | Msa0641670 | 0.802757 | 4.820345e-49 | -8.615850e-47 |
| Msa0052640 | Msa0661190 | -0.800206 | 1.606744e-48 | -8.615850e-47 |
| Msa0052640 | Msa0661210 | 0.814966 | 1.177148e-51 | -8.615850e-47 |
| Msa0052640 | Msa0688960 | 0.819637 | 1.046261e-52 | -8.615850e-47 |
| Msa0052640 | Msa0691900 | 0.804909 | 1.722689e-49 | -8.615850e-47 |
| Msa0052640 | Msa0692830 | 0.831303 | 1.802178e-55 | -8.615850e-47 |
| Msa0052640 | Msa0692950 | 0.834100 | 3.644249e-56 | -8.615850e-47 |
| Msa0052640 | Msa0701920 | 0.801760 | 7.732424e-49 | -8.615850e-47 |
| Msa0052640 | Msa0716840 | 0.821604 | 3.696842e-53 | -8.615850e-47 |
| Msa0052640 | Msa0717230 | -0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0052640 | Msa0737600 | 0.806357 | 8.554746e-50 | -8.615850e-47 |
| Msa0052640 | Msa0743720 | 0.805529 | 1.277441e-49 | -8.615850e-47 |
| Msa0052640 | Msa0745790 | 0.803667 | 3.124974e-49 | -8.615850e-47 |
| Msa0052640 | Msa0784860 | 0.801929 | 7.138820e-49 | -8.615850e-47 |
| Msa0052640 | Msa0795920 | 0.803669 | 3.121455e-49 | -8.615850e-47 |
| Msa0052640 | Msa0799680 | -0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0052640 | Msa0808270 | 0.812710 | 3.696960e-51 | -8.615850e-47 |
| Msa0052640 | Msa0849030 | 0.800663 | 1.296464e-48 | -8.615850e-47 |
| Msa0052640 | Msa0866550 | 0.801498 | 8.753495e-49 | -8.615850e-47 |
| Msa0052640 | Msa0982430 | 0.819592 | 1.070931e-52 | -8.615850e-47 |
| Msa0052640 | Msa1009820 | 0.817204 | 3.723119e-52 | -8.615850e-47 |
| Msa0052640 | Msa1012830 | 0.826687 | 2.365875e-54 | -8.615850e-47 |
| Msa0052640 | Msa1021540 | 0.803365 | 3.609895e-49 | -8.615850e-47 |
| Msa0052640 | Msa1037420 | 0.833898 | 4.093707e-56 | -8.615850e-47 |
| Msa0052640 | Msa1051200 | 0.845602 | 3.666601e-59 | -8.615850e-47 |
| Msa0052640 | Msa1123810 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0052640 | Msa1137700 | 0.830484 | 2.861042e-55 | -8.615850e-47 |
| Msa0052640 | Msa1171870 | 0.800705 | 1.271653e-48 | -8.615850e-47 |
| Msa0052640 | Msa1173140 | 0.984637 | 3.828646e-161 | -8.615850e-47 |
| Msa0052640 | Msa1188070 | 0.804023 | 2.635697e-49 | -8.615850e-47 |
| Msa0052640 | Msa1201240 | 0.807823 | 4.187233e-50 | -8.615850e-47 |
| Msa0052640 | Msa1280320 | 0.801668 | 8.077464e-49 | -8.615850e-47 |
| Msa0052640 | Msa1322490 | 0.809108 | 2.226613e-50 | -8.615850e-47 |
| Msa0052640 | Msa1359630 | 0.801367 | 9.309401e-49 | -8.615850e-47 |
| Msa0052640 | Msa1361520 | 0.817560 | 3.095002e-52 | -8.615850e-47 |
| Msa0052640 | Msa1385770 | 0.831065 | 2.061381e-55 | -8.615850e-47 |
| Msa0052640 | Msa1390180 | 0.809187 | 2.142263e-50 | -8.615850e-47 |
| Msa0052640 | Msa1403680 | 0.815608 | 8.474376e-52 | -8.615850e-47 |
| Msa0052640 | Msa1409240 | 0.831733 | 1.412196e-55 | -8.615850e-47 |
| Msa0052640 | Msa1432400 | 0.803585 | 3.250000e-49 | -8.615850e-47 |
| Msa0052640 | Msa1434140 | 0.832609 | 8.572031e-56 | -8.615850e-47 |
| Msa0052640 | Msa1435370 | 0.830215 | 3.329760e-55 | -8.615850e-47 |
| Msa0052640 | Msa1440910 | 0.822023 | 2.956354e-53 | -8.615850e-47 |
| Msa0052640 | Msa1454480 | 0.808366 | 3.209171e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052640 | MtrunA17_Chr1g0152361 | 95.767 | 378 | 16 | 0 | 173 | 550 | 4 | 381 | 0.0 | 738 |
| Msa0052640 | MtrunA17_Chr1g0152361 | 32.093 | 215 | 121 | 7 | 61 | 258 | 3 | 209 | 4.10e-17 | 83.6 |
| Msa0052640 | MtrunA17_Chr7g0234801 | 53.333 | 525 | 235 | 6 | 24 | 542 | 20 | 540 | 0.0 | 533 |
| Msa0052640 | MtrunA17_Chr8g0377771 | 51.103 | 544 | 255 | 5 | 23 | 561 | 23 | 560 | 0.0 | 532 |
| Msa0052640 | MtrunA17_Chr8g0339141 | 53.396 | 530 | 237 | 5 | 24 | 546 | 26 | 552 | 7.32e-178 | 514 |
| Msa0052640 | MtrunA17_Chr7g0255551 | 41.406 | 512 | 287 | 6 | 37 | 542 | 19 | 523 | 1.14e-132 | 397 |
| Msa0052640 | MtrunA17_Chr7g0255551 | 31.667 | 240 | 141 | 5 | 32 | 258 | 130 | 359 | 4.44e-25 | 109 |
| Msa0052640 | MtrunA17_Chr1g0152351 | 95.930 | 172 | 7 | 0 | 1 | 172 | 25 | 196 | 1.68e-102 | 308 |
| Msa0052640 | MtrunA17_Chr8g0352971 | 47.181 | 337 | 162 | 7 | 54 | 380 | 14 | 344 | 1.88e-90 | 285 |
| Msa0052640 | MtrunA17_Chr8g0352971 | 35.683 | 227 | 129 | 5 | 42 | 258 | 123 | 342 | 2.30e-25 | 108 |
| Msa0052640 | MtrunA17_Chr8g0338001 | 43.109 | 341 | 186 | 4 | 130 | 466 | 41 | 377 | 1.46e-84 | 270 |
| Msa0052640 | MtrunA17_Chr8g0338001 | 28.956 | 297 | 176 | 10 | 28 | 299 | 50 | 336 | 4.59e-19 | 89.7 |
| Msa0052640 | MtrunA17_Chr4g0027201 | 29.779 | 544 | 347 | 10 | 24 | 544 | 20 | 551 | 8.67e-57 | 201 |
| Msa0052640 | MtrunA17_Chr8g0338221 | 37.818 | 275 | 108 | 5 | 137 | 370 | 31 | 283 | 1.18e-46 | 165 |
| Msa0052640 | MtrunA17_Chr8g0336421 | 46.821 | 173 | 90 | 1 | 210 | 380 | 3 | 175 | 5.12e-43 | 160 |
| Msa0052640 | MtrunA17_Chr8g0336421 | 35.632 | 174 | 95 | 5 | 100 | 258 | 2 | 173 | 5.88e-22 | 99.0 |
| Msa0052640 | MtrunA17_Chr8g0338181 | 50.331 | 151 | 72 | 1 | 274 | 421 | 2 | 152 | 1.00e-41 | 147 |
| Msa0052640 | MtrunA17_Chr8g0338631 | 43.939 | 132 | 73 | 1 | 335 | 466 | 1 | 131 | 5.33e-32 | 120 |
| Msa0052640 | MtrunA17_Chr4g0019501 | 31.579 | 304 | 189 | 9 | 254 | 544 | 37 | 334 | 6.09e-29 | 118 |
| Msa0052640 | MtrunA17_Chr8g0338661 | 47.727 | 88 | 46 | 0 | 334 | 421 | 2 | 89 | 2.83e-23 | 94.4 |
| Msa0052640 | MtrunA17_Chr8g0345571 | 36.813 | 182 | 77 | 6 | 171 | 321 | 10 | 184 | 3.29e-22 | 94.7 |
| Msa0052640 | MtrunA17_Chr8g0338061 | 45.455 | 88 | 48 | 0 | 334 | 421 | 2 | 89 | 1.40e-21 | 89.7 |
| Msa0052640 | MtrunA17_Chr8g0338191 | 37.086 | 151 | 59 | 2 | 144 | 259 | 40 | 189 | 8.08e-21 | 90.5 |
| Msa0052640 | MtrunA17_Chr8g0339161 | 29.319 | 191 | 100 | 6 | 261 | 422 | 58 | 242 | 1.52e-14 | 73.9 |
| Msa0052640 | MtrunA17_Chr7g0237741 | 36.752 | 117 | 66 | 1 | 396 | 512 | 95 | 203 | 1.44e-12 | 68.2 |
| Msa0052640 | MtrunA17_Chr8g0374621 | 31.579 | 171 | 93 | 6 | 381 | 541 | 203 | 359 | 2.50e-11 | 65.5 |
| Msa0052640 | MtrunA17_Chr2g0323971 | 32.653 | 147 | 88 | 2 | 396 | 542 | 98 | 233 | 2.81e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052640 | AT3G25230.1 | 53.042 | 526 | 237 | 5 | 27 | 546 | 29 | 550 | 0.0 | 545 |
| Msa0052640 | AT3G25230.2 | 53.257 | 522 | 234 | 5 | 27 | 542 | 29 | 546 | 0.0 | 543 |
| Msa0052640 | AT5G48570.1 | 51.698 | 530 | 245 | 7 | 21 | 542 | 30 | 556 | 0.0 | 531 |
| Msa0052640 | AT1G58450.1 | 60.256 | 156 | 61 | 1 | 387 | 542 | 1 | 155 | 2.16e-58 | 192 |
| Msa0052640 | AT3G54010.1 | 30.361 | 527 | 324 | 11 | 42 | 541 | 36 | 546 | 1.29e-54 | 196 |
| Msa0052640 | AT3G54010.1 | 29.583 | 240 | 151 | 6 | 149 | 380 | 32 | 261 | 2.70e-16 | 82.8 |
| Msa0052640 | AT3G54010.2 | 30.917 | 469 | 285 | 10 | 96 | 541 | 4 | 456 | 9.03e-50 | 181 |
| Msa0052640 | AT3G21640.1 | 31.690 | 284 | 186 | 6 | 267 | 544 | 48 | 329 | 1.38e-28 | 117 |
| Msa0052640 | AT4G30480.2 | 33.333 | 180 | 88 | 5 | 388 | 564 | 97 | 247 | 6.43e-14 | 72.8 |
| Msa0052640 | AT5G21990.1 | 34.677 | 124 | 75 | 1 | 392 | 515 | 99 | 216 | 1.43e-11 | 67.8 |
Find 161 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGAAAGTCATTCAGTTTA+AGG | 0.149462 | 1_2:-6940572 | None:intergenic |
| ACACAACAAACATTTATTTA+TGG | 0.165180 | 1_2:+6942281 | Msa0052640:three_prime_UTR |
| ATTAATATTACCTTTGTCTT+AGG | 0.223221 | 1_2:-6941668 | None:intergenic |
| GTTAGCAGAGATGGATCTTT+AGG | 0.231303 | 1_2:+6940483 | Msa0052640:CDS |
| ATACATCCCGATTATGCTTT+TGG | 0.235249 | 1_2:+6939562 | Msa0052640:CDS |
| AACATTTCCAAAAGCATAAT+CGG | 0.256443 | 1_2:-6939569 | None:intergenic |
| TTTGCTTGATGGAACCAAAT+TGG | 0.257054 | 1_2:+6936975 | Msa0052640:CDS |
| AGAGGATGGGGTGGTGAAAA+TGG | 0.273488 | 1_2:+6942099 | Msa0052640:CDS |
| GTCATAGTCATGATCACTTT+TGG | 0.278066 | 1_2:-6938385 | None:intergenic |
| ATCGGGATGTATACTGATTA+TGG | 0.284749 | 1_2:-6939551 | None:intergenic |
| ATCCCTAGCAGAACCCAATT+TGG | 0.291995 | 1_2:-6936989 | None:intergenic |
| CGCAAAGATGGCAGTGTTAT+CGG | 0.294603 | 1_2:+6936667 | Msa0052640:exon |
| TGCCACCTCTCCTTTCTTCA+TGG | 0.300367 | 1_2:-6937779 | None:intergenic |
| TGGAATTATCAAGAAAATTA+TGG | 0.305364 | 1_2:+6937918 | Msa0052640:CDS |
| TTGAGGTGGAACTCGTTTCT+TGG | 0.318251 | 1_2:+6937866 | Msa0052640:CDS |
| TATGACAAACTCCTAATCTT+TGG | 0.329131 | 1_2:+6942307 | Msa0052640:three_prime_UTR |
| TCTGTAGAACAAGTGATTAC+TGG | 0.347109 | 1_2:+6939487 | Msa0052640:intron |
| TGCAACTATAGTGAAGTATC+AGG | 0.359533 | 1_2:+6938163 | Msa0052640:intron |
| TATGTTGGAACTTTGCTTGA+TGG | 0.362150 | 1_2:+6936964 | Msa0052640:CDS |
| AAGCCTGTCATAAATGTTAC+TGG | 0.362601 | 1_2:+6938681 | Msa0052640:CDS |
| TGGTGTATGTAGATGCCTTT+GGG | 0.374569 | 1_2:+6938574 | Msa0052640:intron |
| TTAGCAGAGATGGATCTTTA+GGG | 0.377376 | 1_2:+6940484 | Msa0052640:CDS |
| TTGCTTGATGGAACCAAATT+GGG | 0.378964 | 1_2:+6936976 | Msa0052640:CDS |
| ACATTACCTTCTGTTGTGTC+TGG | 0.381352 | 1_2:+6937808 | Msa0052640:CDS |
| CTTAAACTGAATGACTTTCC+TGG | 0.382468 | 1_2:+6940573 | Msa0052640:CDS |
| TAGAAGCATTTAAAGTATAC+AGG | 0.384628 | 1_2:-6942188 | None:intergenic |
| GATGGTAGCTGCATAAATTT+CGG | 0.391326 | 1_2:+6942239 | Msa0052640:three_prime_UTR |
| TTAAAGTATACAGGTTCAAC+AGG | 0.393822 | 1_2:-6942179 | None:intergenic |
| GGAGATAAAAGAAGATGAAC+TGG | 0.402641 | 1_2:+6936688 | Msa0052640:CDS |
| AAGAAGAAGCTTCTCAAAAT+CGG | 0.406416 | 1_2:+6936794 | Msa0052640:CDS |
| GTGGTGTATGTAGATGCCTT+TGG | 0.406796 | 1_2:+6938573 | Msa0052640:intron |
| CGTAACATTTGCACCCTCAT+TGG | 0.412458 | 1_2:-6938757 | None:intergenic |
| GGGGAGAAGGGGAGTGAAGC+TGG | 0.417002 | 1_2:+6938594 | Msa0052640:CDS |
| TGGGGTGGTGAAAATGGAAA+TGG | 0.423574 | 1_2:+6942105 | Msa0052640:CDS |
| TATATACAATATGTAATAGA+TGG | 0.423761 | 1_2:+6942221 | Msa0052640:three_prime_UTR |
| GTAACATGATCGTTGAAGTT+GGG | 0.436434 | 1_2:-6936833 | None:intergenic |
| CTTTAAATGCTTCTAACAAA+AGG | 0.438201 | 1_2:+6942196 | Msa0052640:three_prime_UTR |
| CAATGAGGGTGCAAATGTTA+CGG | 0.438397 | 1_2:+6938758 | Msa0052640:CDS |
| ATCAAGAAAATTATGGAGAA+GGG | 0.440426 | 1_2:+6937925 | Msa0052640:CDS |
| GCTCCATGTTAATATTGAAT+TGG | 0.441324 | 1_2:+6938650 | Msa0052640:CDS |
| AATGAGGGTGCAAATGTTAC+GGG | 0.443135 | 1_2:+6938759 | Msa0052640:CDS |
| TCTCAAAATCGGACACGGTT+GGG | 0.446035 | 1_2:+6936805 | Msa0052640:CDS |
| ATGTTGTTCGTCCAAAGATT+AGG | 0.446225 | 1_2:-6942318 | None:intergenic |
| TGTTCTCAAGCAGAGATTGA+AGG | 0.449530 | 1_2:+6942066 | Msa0052640:intron |
| GGAAATTTATTATTTAAAAG+TGG | 0.450903 | 1_2:+6940317 | Msa0052640:CDS |
| CTCATCGGTTACAAATTTCA+AGG | 0.451255 | 1_2:-6939349 | None:intergenic |
| TTAAGAAGATTATTAAAGAA+GGG | 0.454632 | 1_2:+6938718 | Msa0052640:CDS |
| TCTTCATTGTTGCCACTGCT+CGG | 0.459281 | 1_2:-6939516 | None:intergenic |
| AACATTTATGACAGGCTTGA+AGG | 0.460983 | 1_2:-6938676 | None:intergenic |
| CAACTCGGTTGTGCAATTTG+AGG | 0.461614 | 1_2:+6937849 | Msa0052640:CDS |
| ATTAAGAAGATTATTAAAGA+AGG | 0.463062 | 1_2:+6938717 | Msa0052640:CDS |
| GTGGTGGATGTTTGCAAAGA+TGG | 0.463377 | 1_2:+6937895 | Msa0052640:CDS |
| CTCAAAAGCTCGGCGAAGAA+AGG | 0.465629 | 1_2:+6936747 | Msa0052640:CDS |
| GCGAAAACTCTATCTGTGTA+TGG | 0.468243 | 1_2:-6936647 | None:intergenic |
| TAGAATTCAACTCCTCCTTC+CGG | 0.473527 | 1_2:-6938221 | None:intergenic |
| GCTGATTCGATGACTTCGCC+TGG | 0.474604 | 1_2:-6936719 | None:intergenic |
| TTGAGAAGCTTCTTCTTGAT+CGG | 0.478508 | 1_2:-6936788 | None:intergenic |
| CTTCTTCTTGATCGGCGAGT+TGG | 0.483947 | 1_2:-6936780 | None:intergenic |
| TTGAAATTTGTAACCGATGA+GGG | 0.487322 | 1_2:+6939351 | Msa0052640:CDS |
| AGGTTGAGAAAGAAGAGGAT+GGG | 0.490164 | 1_2:+6942086 | Msa0052640:CDS |
| CGTTTCTTGGATCACGGTGG+TGG | 0.490362 | 1_2:+6937879 | Msa0052640:CDS |
| TTGAGGTGGATCCACAAAAC+AGG | 0.492021 | 1_2:+6941467 | Msa0052640:CDS |
| AAGGGGAGTGAAGCTGGCAG+CGG | 0.494246 | 1_2:+6938600 | Msa0052640:CDS |
| TGTAGATGCCTTTGGGGAGA+AGG | 0.495613 | 1_2:+6938581 | Msa0052640:intron |
| GTACATAGTTTGATTGCTCC+AGG | 0.496125 | 1_2:-6940591 | None:intergenic |
| TTAACATGGAGCATTGAGTC+TGG | 0.496455 | 1_2:-6938639 | None:intergenic |
| AAGGTTGAGAAAGAAGAGGA+TGG | 0.498928 | 1_2:+6942085 | Msa0052640:CDS |
| ACATTTCCAAAAGCATAATC+GGG | 0.500114 | 1_2:-6939568 | None:intergenic |
| AGTAACATGATCGTTGAAGT+TGG | 0.501257 | 1_2:-6936834 | None:intergenic |
| AGCAGTGGCAACAATGAAGA+AGG | 0.504681 | 1_2:+6939519 | Msa0052640:CDS |
| TCATTACTATTTAACTCCCA+TGG | 0.504757 | 1_2:-6940260 | None:intergenic |
| GGTTGAGAAAGAAGAGGATG+GGG | 0.505171 | 1_2:+6942087 | Msa0052640:CDS |
| ATGCATGCAGTTCATTATGT+TGG | 0.505277 | 1_2:+6936949 | Msa0052640:intron |
| GCAAAAGCATATATAGAGAC+AGG | 0.506388 | 1_2:+6941406 | Msa0052640:CDS |
| TTCTCAAAATCGGACACGGT+TGG | 0.506403 | 1_2:+6936804 | Msa0052640:CDS |
| TATCAAGAAAATTATGGAGA+AGG | 0.506761 | 1_2:+6937924 | Msa0052640:CDS |
| AGGGGAGTGAAGCTGGCAGC+GGG | 0.512660 | 1_2:+6938601 | Msa0052640:CDS |
| GGGGTGGTGAAAATGGAAAT+GGG | 0.512681 | 1_2:+6942106 | Msa0052640:CDS |
| TGGATCTTTAGGGGATGATG+AGG | 0.513068 | 1_2:+6940494 | Msa0052640:CDS |
| GAACCAAATTGGGTTCTGCT+AGG | 0.513359 | 1_2:+6936986 | Msa0052640:CDS |
| AGGTGAATTGTATGCTGGAT+TGG | 0.515445 | 1_2:+6937741 | Msa0052640:intron |
| CTCAAATTGCACAACCGAGT+TGG | 0.515506 | 1_2:-6937848 | None:intergenic |
| GACAGCGCAGCTCCTTCTGA+TGG | 0.517117 | 1_2:+6942139 | Msa0052640:CDS |
| TAAGAAGATTATTAAAGAAG+GGG | 0.517723 | 1_2:+6938719 | Msa0052640:CDS |
| AAAATTATGGAGAAGGGGAA+AGG | 0.523585 | 1_2:+6937931 | Msa0052640:CDS |
| GCTGGGAGGAAGAAAGAAGA+AGG | 0.524602 | 1_2:+6940296 | Msa0052640:CDS |
| AACAATGAAGAAGGGTGAAA+GGG | 0.524996 | 1_2:+6939528 | Msa0052640:CDS |
| AGCAGCGAAGAAGTATGATA+AGG | 0.525722 | 1_2:+6940352 | Msa0052640:CDS |
| TAACATGATCGTTGAAGTTG+GGG | 0.527154 | 1_2:-6936832 | None:intergenic |
| GTGATAGGTGAATTGTATGC+TGG | 0.527463 | 1_2:+6937736 | Msa0052640:intron |
| TTGTATGCTGGATTGGATGA+TGG | 0.531924 | 1_2:+6937748 | Msa0052640:CDS |
| GTAGATGCCTTTGGGGAGAA+GGG | 0.532024 | 1_2:+6938582 | Msa0052640:intron |
| GAAGATTATTAAAGAAGGGG+AGG | 0.532650 | 1_2:+6938722 | Msa0052640:CDS |
| GGAATCGTCACCATGAAGAA+AGG | 0.533318 | 1_2:+6937769 | Msa0052640:CDS |
| AACCAAATTGGGTTCTGCTA+GGG | 0.534151 | 1_2:+6936987 | Msa0052640:CDS |
| AGCGCAGCTCCTTCTGATGG+CGG | 0.535316 | 1_2:+6942142 | Msa0052640:CDS |
| AAAATTAAACCGCCATCAGA+AGG | 0.538652 | 1_2:-6942151 | None:intergenic |
| AGTAGTGTATGACATTGAAA+TGG | 0.540195 | 1_2:+6939633 | Msa0052640:CDS |
| CACTGTTGTTGCAGAAACTC+CGG | 0.541555 | 1_2:+6938202 | Msa0052640:CDS |
| TATCAGGTGGCACTTGAAGA+TGG | 0.545537 | 1_2:+6938179 | Msa0052640:CDS |
| TGAGAAAGAAGAGGATGGGG+TGG | 0.548915 | 1_2:+6942090 | Msa0052640:CDS |
| AAATTATGGAGAAGGGGAAA+GGG | 0.550984 | 1_2:+6937932 | Msa0052640:CDS |
| AAAATGGAAATGGGCAATGT+TGG | 0.553546 | 1_2:+6942115 | Msa0052640:CDS |
| CTCGGTTGTGCAATTTGAGG+TGG | 0.556739 | 1_2:+6937852 | Msa0052640:CDS |
| AATCGTTGAGAGTTTCATGC+TGG | 0.559876 | 1_2:+6940529 | Msa0052640:CDS |
| TTCACTCCCCTTCTCCCCAA+AGG | 0.560275 | 1_2:-6938589 | None:intergenic |
| TTTCGGATGAAAGTCTTACA+TGG | 0.563583 | 1_2:+6942256 | Msa0052640:three_prime_UTR |
| TACACAGCTATGCTAGAAGA+TGG | 0.564478 | 1_2:+6939288 | Msa0052640:CDS |
| AAGGACTTCATCAAGATCAC+CGG | 0.570891 | 1_2:-6937965 | None:intergenic |
| CAACAATGAAGAAGGGTGAA+AGG | 0.574124 | 1_2:+6939527 | Msa0052640:CDS |
| AAGATTATTAAAGAAGGGGA+GGG | 0.574208 | 1_2:+6938723 | Msa0052640:CDS |
| GGTGATCTTGATGAAGTCCT+TGG | 0.574730 | 1_2:+6937967 | Msa0052640:CDS |
| GGAACTCGTTTCTTGGATCA+CGG | 0.577330 | 1_2:+6937873 | Msa0052640:CDS |
| GATGAACTGGATGAAGAACC+AGG | 0.578061 | 1_2:+6936701 | Msa0052640:CDS |
| TATGTTTGCACCTAAGACAA+AGG | 0.578769 | 1_2:+6941658 | Msa0052640:CDS |
| ATTGAAGGTTGAGAAAGAAG+AGG | 0.580336 | 1_2:+6942081 | Msa0052640:CDS |
| AAGAATATACTCACCCTCAT+CGG | 0.581459 | 1_2:-6939364 | None:intergenic |
| TGTCCAAGAGAAAATGTGAC+AGG | 0.582221 | 1_2:-6937021 | None:intergenic |
| TCATCGGTTACAAATTTCAA+GGG | 0.583118 | 1_2:-6939348 | None:intergenic |
| AATAATCTTCTTAATCACCA+TGG | 0.585362 | 1_2:-6938709 | None:intergenic |
| TCACCAGTAACATTTATGAC+AGG | 0.588648 | 1_2:-6938684 | None:intergenic |
| TTCATAGGAGAAAGCACCAT+GGG | 0.589750 | 1_2:+6940244 | Msa0052640:intron |
| TCAAGAAAATTATGGAGAAG+GGG | 0.591587 | 1_2:+6937926 | Msa0052640:CDS |
| GTTGAATTCTATGTGAATGA+TGG | 0.593431 | 1_2:+6938233 | Msa0052640:CDS |
| AGTGTATGACATTGAAATGG+TGG | 0.597567 | 1_2:+6939636 | Msa0052640:CDS |
| AGCAATCAAACTATGTACTC+AGG | 0.602316 | 1_2:+6940596 | Msa0052640:CDS |
| AAATGTTACTGGTGACTCCA+TGG | 0.602785 | 1_2:+6938692 | Msa0052640:CDS |
| AGAGTTTCATGCTGGTTGAA+CGG | 0.605134 | 1_2:+6940537 | Msa0052640:CDS |
| GGTGCTTTCACAGCCAATGA+GGG | 0.605431 | 1_2:+6938744 | Msa0052640:CDS |
| TAGATGCCTTTGGGGAGAAG+GGG | 0.606372 | 1_2:+6938583 | Msa0052640:intron |
| AGACATCAAGAAAGCTCTTG+AGG | 0.606805 | 1_2:+6941450 | Msa0052640:CDS |
| ACATGGAGCATTGAGTCTGG+TGG | 0.608526 | 1_2:-6938636 | None:intergenic |
| GTGGATGTTTGCAAAGATGG+TGG | 0.611915 | 1_2:+6937898 | Msa0052640:CDS |
| AGTGATCATGACTATGACAA+GGG | 0.614434 | 1_2:+6938390 | Msa0052640:CDS |
| TTGAGTCTGGTGGAATTGAA+CGG | 0.618484 | 1_2:-6938626 | None:intergenic |
| ACAACCGAGTTGGAGTCTTG+TGG | 0.620681 | 1_2:-6937838 | None:intergenic |
| TCAGCACCACCTCAAAAGCT+CGG | 0.625877 | 1_2:+6936737 | Msa0052640:CDS |
| TAGCAGAGATGGATCTTTAG+GGG | 0.626024 | 1_2:+6940485 | Msa0052640:CDS |
| CACCATGAAGAAAGGAGAGG+TGG | 0.628946 | 1_2:+6937777 | Msa0052640:CDS |
| CATCAAGAAAGCTCTTGAGG+TGG | 0.629058 | 1_2:+6941453 | Msa0052640:CDS |
| GGGTGCTTTCACAGCCAATG+AGG | 0.631209 | 1_2:+6938743 | Msa0052640:CDS |
| GCAGTGGCAACAATGAAGAA+GGG | 0.633974 | 1_2:+6939520 | Msa0052640:CDS |
| GATCTTGCTATTGTGCCACC+AGG | 0.635625 | 1_2:+6939604 | Msa0052640:CDS |
| TACTGGTTTAGACCGAGCAG+TGG | 0.636057 | 1_2:+6939504 | Msa0052640:CDS |
| GTTGCAGAAACTCCGGAAGG+AGG | 0.643747 | 1_2:+6938209 | Msa0052640:CDS |
| AGGACTTCATCAAGATCACC+GGG | 0.647810 | 1_2:-6937964 | None:intergenic |
| CTTGAAATTTGTAACCGATG+AGG | 0.660754 | 1_2:+6939350 | Msa0052640:CDS |
| AAGTGATCATGACTATGACA+AGG | 0.663430 | 1_2:+6938389 | Msa0052640:CDS |
| AAGCTTCTCAAAATCGGACA+CGG | 0.665668 | 1_2:+6936800 | Msa0052640:CDS |
| GGGAAAGGGAATGATCGACC+CGG | 0.668601 | 1_2:+6937946 | Msa0052640:CDS |
| AACTATAGTGAAGTATCAGG+TGG | 0.675873 | 1_2:+6938166 | Msa0052640:intron |
| ACACCAATTCAATATTAACA+TGG | 0.676472 | 1_2:-6938653 | None:intergenic |
| ATGCTTCCAGACACAACAGA+AGG | 0.678081 | 1_2:-6937814 | None:intergenic |
| GTGATCATGACTATGACAAG+GGG | 0.688661 | 1_2:+6938391 | Msa0052640:CDS |
| CGTCACCATGAAGAAAGGAG+AGG | 0.691765 | 1_2:+6937774 | Msa0052640:CDS |
| CATTCCACAAGACTCCAACT+CGG | 0.693089 | 1_2:+6937834 | Msa0052640:CDS |
| ATTCATAGGAGAAAGCACCA+TGG | 0.695132 | 1_2:+6940243 | Msa0052640:intron |
| AACATGATCGTTGAAGTTGG+GGG | 0.695655 | 1_2:-6936831 | None:intergenic |
| GTTGTTGCAGAAACTCCGGA+AGG | 0.715531 | 1_2:+6938206 | Msa0052640:CDS |
| GGTGTATGTAGATGCCTTTG+GGG | 0.736707 | 1_2:+6938575 | Msa0052640:intron |
| ACTCGTTTCTTGGATCACGG+TGG | 0.738230 | 1_2:+6937876 | Msa0052640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTACTAAAAGATTAT+TGG | + | chr1_2:6938889-6938908 | Msa0052640:intron | 10.0% |
| !!! | ATTGATATTCTTTAATTTAA+AGG | + | chr1_2:6940003-6940022 | Msa0052640:intron | 10.0% |
| !! | AATAATAAATGTAATATGAT+TGG | - | chr1_2:6941292-6941311 | None:intergenic | 10.0% |
| !!! | TATTTAGTATAGATTTTATG+TGG | + | chr1_2:6937113-6937132 | Msa0052640:intron | 15.0% |
| !!! | ATTTAGTATAGATTTTATGT+GGG | + | chr1_2:6937114-6937133 | Msa0052640:intron | 15.0% |
| !! | TAAATTCATAATGTTAATGT+GGG | + | chr1_2:6937712-6937731 | Msa0052640:intron | 15.0% |
| !! | TAAAATAAAGATATGATACT+GGG | - | chr1_2:6938474-6938493 | None:intergenic | 15.0% |
| !! | ATAAAATAAAGATATGATAC+TGG | - | chr1_2:6938475-6938494 | None:intergenic | 15.0% |
| !!! | ATATCTTTATTTTATGTTTC+TGG | + | chr1_2:6938480-6938499 | Msa0052640:intron | 15.0% |
| !! | ATTAAGAAGATTATTAAAGA+AGG | + | chr1_2:6938717-6938736 | Msa0052640:CDS | 15.0% |
| !! | TTAAGAAGATTATTAAAGAA+GGG | + | chr1_2:6938718-6938737 | Msa0052640:CDS | 15.0% |
| !! | TTGATATTTCATAAATTTGA+GGG | - | chr1_2:6939803-6939822 | None:intergenic | 15.0% |
| !! | ATTGATATTTCATAAATTTG+AGG | - | chr1_2:6939804-6939823 | None:intergenic | 15.0% |
| !! | ACTTAAAAAAATTGTAATTG+AGG | - | chr1_2:6939881-6939900 | None:intergenic | 15.0% |
| !! | TTTATTTGATTCAAATTCAT+AGG | + | chr1_2:6940229-6940248 | Msa0052640:intron | 15.0% |
| !! | AAATAGTAATGAAAAAATTG+AGG | + | chr1_2:6940271-6940290 | Msa0052640:CDS | 15.0% |
| !! | GGAAATTTATTATTTAAAAG+TGG | + | chr1_2:6940317-6940336 | Msa0052640:CDS | 15.0% |
| !! | TATATACAATATGTAATAGA+TGG | + | chr1_2:6942221-6942240 | Msa0052640:three_prime_UTR | 15.0% |
| !!! | TACTATAATTTGAAATCCAA+AGG | - | chr1_2:6937143-6937162 | None:intergenic | 20.0% |
| !!! | TTATAGTATTGAAGTTGTAT+CGG | + | chr1_2:6937155-6937174 | Msa0052640:intron | 20.0% |
| !! | GTGACTATAAATAACAATAT+CGG | + | chr1_2:6937254-6937273 | Msa0052640:intron | 20.0% |
| !! | TGACTATAAATAACAATATC+GGG | + | chr1_2:6937255-6937274 | Msa0052640:intron | 20.0% |
| !!! | TGTAATTTTTGCCAAAATTA+CGG | + | chr1_2:6937614-6937633 | Msa0052640:intron | 20.0% |
| !! | GTAAATTCATAATGTTAATG+TGG | + | chr1_2:6937711-6937730 | Msa0052640:intron | 20.0% |
| !! | TGGAATTATCAAGAAAATTA+TGG | + | chr1_2:6937918-6937937 | Msa0052640:CDS | 20.0% |
| !!! | AGACTAATTATTTGAGATAT+TGG | - | chr1_2:6938539-6938558 | None:intergenic | 20.0% |
| !! | TAAGAAGATTATTAAAGAAG+GGG | + | chr1_2:6938719-6938738 | Msa0052640:CDS | 20.0% |
| !! | TATGCTAAAATGAACATTAA+GGG | - | chr1_2:6938972-6938991 | None:intergenic | 20.0% |
| !! | ATAGTTATTATAGAAGTCAA+CGG | + | chr1_2:6939076-6939095 | Msa0052640:intron | 20.0% |
| !! | TCATAAACAGTTGATTATAT+GGG | - | chr1_2:6939428-6939447 | None:intergenic | 20.0% |
| !!! | TTTTTTTATATAGACTGTGA+TGG | + | chr1_2:6939723-6939742 | Msa0052640:intron | 20.0% |
| !! | AAATTGAACATTCGATTTAA+GGG | - | chr1_2:6939832-6939851 | None:intergenic | 20.0% |
| !! | TAAATTGAACATTCGATTTA+AGG | - | chr1_2:6939833-6939852 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAATTCACGACTT+TGG | + | chr1_2:6940421-6940440 | Msa0052640:intron | 20.0% |
| !!! | ATTTATAATTACCTGTTTTG+TGG | - | chr1_2:6941481-6941500 | None:intergenic | 20.0% |
| !! | ACAAAACAGGTAATTATAAA+TGG | + | chr1_2:6941480-6941499 | Msa0052640:intron | 20.0% |
| !! | ATTAATATTACCTTTGTCTT+AGG | - | chr1_2:6941671-6941690 | None:intergenic | 20.0% |
| !! | ACACAACAAACATTTATTTA+TGG | + | chr1_2:6942281-6942300 | Msa0052640:three_prime_UTR | 20.0% |
| !!! | TCAACAAAGAAAGCATTAAA+GGG | - | chr1_2:6936928-6936947 | None:intergenic | 25.0% |
| !!! | TTCAACAAAGAAAGCATTAA+AGG | - | chr1_2:6936929-6936948 | None:intergenic | 25.0% |
| ! | ATTTAACATGACATTAGAGT+CGG | + | chr1_2:6937382-6937401 | Msa0052640:intron | 25.0% |
| ! | TTTGAGCTTCAACAAAATTA+CGG | - | chr1_2:6937592-6937611 | None:intergenic | 25.0% |
| ! | TATCAAGAAAATTATGGAGA+AGG | + | chr1_2:6937924-6937943 | Msa0052640:CDS | 25.0% |
| ! | ATCAAGAAAATTATGGAGAA+GGG | + | chr1_2:6937925-6937944 | Msa0052640:CDS | 25.0% |
| ! | AACAGAAAACATCGTTAAAA+TGG | - | chr1_2:6938067-6938086 | None:intergenic | 25.0% |
| ! | CCTTCAACAAGTAAAATAAT+TGG | - | chr1_2:6938346-6938365 | None:intergenic | 25.0% |
| !!! | CCAATTATTTTACTTGTTGA+AGG | + | chr1_2:6938343-6938362 | Msa0052640:intron | 25.0% |
| !! | GATTCATGAAGTCTTTTATT+TGG | - | chr1_2:6938509-6938528 | None:intergenic | 25.0% |
| ! | ACACCAATTCAATATTAACA+TGG | - | chr1_2:6938656-6938675 | None:intergenic | 25.0% |
| ! | AATAATCTTCTTAATCACCA+TGG | - | chr1_2:6938712-6938731 | None:intergenic | 25.0% |
| ! | AATGACTCACATTTCATTAT+TGG | + | chr1_2:6938788-6938807 | Msa0052640:intron | 25.0% |
| ! | GTATGCTAAAATGAACATTA+AGG | - | chr1_2:6938973-6938992 | None:intergenic | 25.0% |
| ! | CATAAACAGTTGATTATATG+GGG | - | chr1_2:6939427-6939446 | None:intergenic | 25.0% |
| ! | GTCATAAACAGTTGATTATA+TGG | - | chr1_2:6939429-6939448 | None:intergenic | 25.0% |
| !! | AACATTTCCAAAAGCATAAT+CGG | - | chr1_2:6939572-6939591 | None:intergenic | 25.0% |
| !!! | TGAAATGGTGGATTTTATTA+AGG | + | chr1_2:6939648-6939667 | Msa0052640:CDS | 25.0% |
| !! | GTGGATTTTATTAAGGTAAA+AGG | + | chr1_2:6939655-6939674 | Msa0052640:intron | 25.0% |
| !! | AGGTCTTTCATTAATTTTCA+TGG | + | chr1_2:6939940-6939959 | Msa0052640:intron | 25.0% |
| !!! | TTTGCTACTTTGTAAATTTG+AGG | + | chr1_2:6940031-6940050 | Msa0052640:intron | 25.0% |
| !!! | TTGCTACTTTGTAAATTTGA+GGG | + | chr1_2:6940032-6940051 | Msa0052640:intron | 25.0% |
| ! | ACTTATATCATTTACTAGCA+TGG | + | chr1_2:6940108-6940127 | Msa0052640:intron | 25.0% |
| ! | TAGTAATGAAAAAATTGAGG+TGG | + | chr1_2:6940274-6940293 | Msa0052640:CDS | 25.0% |
| ! | TCAAAGTTGTTGCAAATAAA+GGG | - | chr1_2:6940382-6940401 | None:intergenic | 25.0% |
| ! | TGTATGGGTTTATAACATAA+TGG | + | chr1_2:6940779-6940798 | Msa0052640:intron | 25.0% |
| ! | ACTATTATTTCAAGCATGTT+TGG | - | chr1_2:6940814-6940833 | None:intergenic | 25.0% |
| ! | AAACATGCTTGAAATAATAG+TGG | + | chr1_2:6940813-6940832 | Msa0052640:intron | 25.0% |
| ! | TTTAAAGATAGGTTCATGTT+GGG | - | chr1_2:6940949-6940968 | None:intergenic | 25.0% |
| !!! | TGAAATGATGGATTTTTTCA+GGG | - | chr1_2:6941033-6941052 | None:intergenic | 25.0% |
| !!! | TTGAAATGATGGATTTTTTC+AGG | - | chr1_2:6941034-6941053 | None:intergenic | 25.0% |
| ! | TATAATATTGCAGGACAAAA+AGG | - | chr1_2:6941181-6941200 | None:intergenic | 25.0% |
| ! | TCAAAAGAATAAGTGTGATA+TGG | - | chr1_2:6941337-6941356 | None:intergenic | 25.0% |
| ! | AATCCAACAATTAATTTCTC+AGG | - | chr1_2:6941519-6941538 | None:intergenic | 25.0% |
| !! | TTGTGTTACTCTTAGAATTT+AGG | + | chr1_2:6941726-6941745 | Msa0052640:intron | 25.0% |
| !! | TTACTCTTAGAATTTAGGTT+GGG | + | chr1_2:6941731-6941750 | Msa0052640:intron | 25.0% |
| ! | AACAAAAAACATGTGACATA+AGG | - | chr1_2:6941967-6941986 | None:intergenic | 25.0% |
| !!! | TGTTGATTGTAAGTTTTCAT+TGG | + | chr1_2:6941996-6942015 | Msa0052640:intron | 25.0% |
| !!! | TAGAAGCATTTAAAGTATAC+AGG | - | chr1_2:6942191-6942210 | None:intergenic | 25.0% |
| ! | CTTTAAATGCTTCTAACAAA+AGG | + | chr1_2:6942196-6942215 | Msa0052640:three_prime_UTR | 25.0% |
| AAGAAGAAGCTTCTCAAAAT+CGG | + | chr1_2:6936794-6936813 | Msa0052640:CDS | 30.0% | |
| GCATAAAGATGAAGATGATT+AGG | - | chr1_2:6936868-6936887 | None:intergenic | 30.0% | |
| AATGTCATGTTAAATGAGCT+TGG | - | chr1_2:6937377-6937396 | None:intergenic | 30.0% | |
| TTTAACATGACATTAGAGTC+GGG | + | chr1_2:6937383-6937402 | Msa0052640:intron | 30.0% | |
| TCATGTACGAATTGTCAAAT+GGG | - | chr1_2:6937450-6937469 | None:intergenic | 30.0% | |
| TTCATGTACGAATTGTCAAA+TGG | - | chr1_2:6937451-6937470 | None:intergenic | 30.0% | |
| TTTGACAATTCGTACATGAA+AGG | + | chr1_2:6937451-6937470 | Msa0052640:intron | 30.0% | |
| AAGGCAGATCATATATACAT+TGG | + | chr1_2:6937470-6937489 | Msa0052640:intron | 30.0% | |
| TCAAGAAAATTATGGAGAAG+GGG | + | chr1_2:6937926-6937945 | Msa0052640:CDS | 30.0% | |
| !!! | TGCTGTATTTCTCTTTTTTC+TGG | + | chr1_2:6938086-6938105 | Msa0052640:intron | 30.0% |
| !!! | TGTCAGCTTATTAGTCTTTT+TGG | + | chr1_2:6938133-6938152 | Msa0052640:intron | 30.0% |
| GTTGAATTCTATGTGAATGA+TGG | + | chr1_2:6938233-6938252 | Msa0052640:CDS | 30.0% | |
| TATGTGAATGATGGTAATAC+CGG | + | chr1_2:6938242-6938261 | Msa0052640:intron | 30.0% | |
| !! | TCCTATTTTATTTCACCGAA+CGG | + | chr1_2:6938284-6938303 | Msa0052640:intron | 30.0% |
| AATAATTGGTCACAAAGACT+GGG | - | chr1_2:6938332-6938351 | None:intergenic | 30.0% | |
| AAATAATTGGTCACAAAGAC+TGG | - | chr1_2:6938333-6938352 | None:intergenic | 30.0% | |
| AAAAGACTTCATGAATCCTA+CGG | + | chr1_2:6938512-6938531 | Msa0052640:intron | 30.0% | |
| ! | AGTCTTGAATTGTTTTCATG+TGG | + | chr1_2:6938554-6938573 | Msa0052640:intron | 30.0% |
| GCTCCATGTTAATATTGAAT+TGG | + | chr1_2:6938650-6938669 | Msa0052640:CDS | 30.0% | |
| AAGATTATTAAAGAAGGGGA+GGG | + | chr1_2:6938723-6938742 | Msa0052640:CDS | 30.0% | |
| ! | TCAGTTGATTCAAATCAGAA+TGG | + | chr1_2:6938812-6938831 | Msa0052640:intron | 30.0% |
| ! | AGAATGGATTCAGAACTATA+AGG | + | chr1_2:6938828-6938847 | Msa0052640:intron | 30.0% |
| !! | TTCATTTTAGCATACCTAGT+GGG | + | chr1_2:6938978-6938997 | Msa0052640:intron | 30.0% |
| !!! | CTAGTACTTTTTCCTACAAT+AGG | - | chr1_2:6939168-6939187 | None:intergenic | 30.0% |
| !! | AGGAAAAAGTACTAGAAGTA+TGG | + | chr1_2:6939173-6939192 | Msa0052640:intron | 30.0% |
| ATTGCACAAGAAAGTAAAAG+AGG | + | chr1_2:6939204-6939223 | Msa0052640:intron | 30.0% | |
| TTGCACAAGAAAGTAAAAGA+GGG | + | chr1_2:6939205-6939224 | Msa0052640:intron | 30.0% | |
| ! | TCATCGGTTACAAATTTCAA+GGG | - | chr1_2:6939351-6939370 | None:intergenic | 30.0% |
| TTGAAATTTGTAACCGATGA+GGG | + | chr1_2:6939351-6939370 | Msa0052640:CDS | 30.0% | |
| ATCAACTGTTTATGACTTCT+AGG | + | chr1_2:6939433-6939452 | Msa0052640:intron | 30.0% | |
| ! | ACATTTCCAAAAGCATAATC+GGG | - | chr1_2:6939571-6939590 | None:intergenic | 30.0% |
| AGTAGTGTATGACATTGAAA+TGG | + | chr1_2:6939633-6939652 | Msa0052640:CDS | 30.0% | |
| ATTTCATAAATTTGAGGGAC+TGG | - | chr1_2:6939798-6939817 | None:intergenic | 30.0% | |
| GACTATTTAAGTCAATATGC+AGG | + | chr1_2:6939920-6939939 | Msa0052640:intron | 30.0% | |
| TCATTACTATTTAACTCCCA+TGG | - | chr1_2:6940263-6940282 | None:intergenic | 30.0% | |
| GTCAAAGTTGTTGCAAATAA+AGG | - | chr1_2:6940383-6940402 | None:intergenic | 30.0% | |
| ATTATTTCAAGCATGTTTGG+AGG | - | chr1_2:6940811-6940830 | None:intergenic | 30.0% | |
| ! | CTTTAAAGATAGGTTCATGT+TGG | - | chr1_2:6940950-6940969 | None:intergenic | 30.0% |
| CAACATGAACCTATCTTTAA+AGG | + | chr1_2:6940948-6940967 | Msa0052640:intron | 30.0% | |
| ! | AACTCAACTCCTTTAAAGAT+AGG | - | chr1_2:6940960-6940979 | None:intergenic | 30.0% |
| TCAATGCAAACTTGAAATGA+TGG | - | chr1_2:6941045-6941064 | None:intergenic | 30.0% | |
| ! | TCATCATTCAGCTTTTAACA+TGG | + | chr1_2:6941243-6941262 | Msa0052640:intron | 30.0% |
| ! | TCACACTTATTCTTTTGATC+AGG | + | chr1_2:6941339-6941358 | Msa0052640:intron | 30.0% |
| TCTCCTGAGAAATTAATTGT+TGG | + | chr1_2:6941513-6941532 | Msa0052640:intron | 30.0% | |
| AGCTTATCATTATGAGAACA+TGG | + | chr1_2:6941542-6941561 | Msa0052640:intron | 30.0% | |
| ! | AACATGGTTTTTCATTTTCC+AGG | + | chr1_2:6941558-6941577 | Msa0052640:intron | 30.0% |
| ! | ACATGGTTTTTCATTTTCCA+GGG | + | chr1_2:6941559-6941578 | Msa0052640:intron | 30.0% |
| GTTACTCTTAGAATTTAGGT+TGG | + | chr1_2:6941730-6941749 | Msa0052640:intron | 30.0% | |
| ATGTGGTGTTTATAAAGCTT+GGG | - | chr1_2:6941799-6941818 | None:intergenic | 30.0% | |
| ! | AAGCTTTATAAACACCACAT+GGG | + | chr1_2:6941799-6941818 | Msa0052640:intron | 30.0% |
| TTCATTGTGTTGGATGTTAA+GGG | - | chr1_2:6941855-6941874 | None:intergenic | 30.0% | |
| TTAAAGTATACAGGTTCAAC+AGG | - | chr1_2:6942182-6942201 | None:intergenic | 30.0% | |
| TATGACAAACTCCTAATCTT+TGG | + | chr1_2:6942307-6942326 | Msa0052640:three_prime_UTR | 30.0% | |
| ! | AGATAGAGTTTTCGCAAAGA+TGG | + | chr1_2:6936655-6936674 | Msa0052640:exon | 35.0% |
| GGAGATAAAAGAAGATGAAC+TGG | + | chr1_2:6936688-6936707 | Msa0052640:CDS | 35.0% | |
| TTGAGAAGCTTCTTCTTGAT+CGG | - | chr1_2:6936791-6936810 | None:intergenic | 35.0% | |
| TAACATGATCGTTGAAGTTG+GGG | - | chr1_2:6936835-6936854 | None:intergenic | 35.0% | |
| GTAACATGATCGTTGAAGTT+GGG | - | chr1_2:6936836-6936855 | None:intergenic | 35.0% | |
| AGTAACATGATCGTTGAAGT+TGG | - | chr1_2:6936837-6936856 | None:intergenic | 35.0% | |
| ATGCATGCAGTTCATTATGT+TGG | + | chr1_2:6936949-6936968 | Msa0052640:intron | 35.0% | |
| TATGTTGGAACTTTGCTTGA+TGG | + | chr1_2:6936964-6936983 | Msa0052640:CDS | 35.0% | |
| TTTGCTTGATGGAACCAAAT+TGG | + | chr1_2:6936975-6936994 | Msa0052640:CDS | 35.0% | |
| TTGCTTGATGGAACCAAATT+GGG | + | chr1_2:6936976-6936995 | Msa0052640:CDS | 35.0% | |
| ATTCAACAACAAGAGAACCT+TGG | - | chr1_2:6937193-6937212 | None:intergenic | 35.0% | |
| AAATTACCCAATCCTAACAC+AGG | + | chr1_2:6937225-6937244 | Msa0052640:intron | 35.0% | |
| AATTACCCAATCCTAACACA+GGG | + | chr1_2:6937226-6937245 | Msa0052640:intron | 35.0% | |
| AAAACTAGCTCAAAGGATGA+GGG | - | chr1_2:6937342-6937361 | None:intergenic | 35.0% | |
| AAAAACTAGCTCAAAGGATG+AGG | - | chr1_2:6937343-6937362 | None:intergenic | 35.0% | |
| !!! | TCATCCTTTGAGCTAGTTTT+TGG | + | chr1_2:6937342-6937361 | Msa0052640:intron | 35.0% |
| !!! | CATCCTTTGAGCTAGTTTTT+GGG | + | chr1_2:6937343-6937362 | Msa0052640:intron | 35.0% |
| !! | AACCGTGATTTGTTCATCAT+CGG | + | chr1_2:6937499-6937518 | Msa0052640:intron | 35.0% |
| AACCGATGATGAACAAATCA+CGG | - | chr1_2:6937504-6937523 | None:intergenic | 35.0% | |
| AATCAAAACACACGCTTAGA+GGG | - | chr1_2:6937539-6937558 | None:intergenic | 35.0% | |
| !!! | GTTTTGATTGATAGTGAGCT+TGG | + | chr1_2:6937550-6937569 | Msa0052640:intron | 35.0% |
| ATTCACCTTAGTGCAATGTA+TGG | - | chr1_2:6937675-6937694 | None:intergenic | 35.0% | |
| AATGTTAATGTGGGTGTGAT+AGG | + | chr1_2:6937721-6937740 | Msa0052640:intron | 35.0% | |
| AAAATTATGGAGAAGGGGAA+AGG | + | chr1_2:6937931-6937950 | Msa0052640:CDS | 35.0% | |
| AAATTATGGAGAAGGGGAAA+GGG | + | chr1_2:6937932-6937951 | Msa0052640:CDS | 35.0% | |
| ! | TAATTCTTTTGCTTCCCACA+TGG | + | chr1_2:6938012-6938031 | Msa0052640:intron | 35.0% |
| ! | TGCAACTATAGTGAAGTATC+AGG | + | chr1_2:6938163-6938182 | Msa0052640:intron | 35.0% |
| ! | AACTATAGTGAAGTATCAGG+TGG | + | chr1_2:6938166-6938185 | Msa0052640:intron | 35.0% |
| !! | CCTATTTTATTTCACCGAAC+GGG | + | chr1_2:6938285-6938304 | Msa0052640:intron | 35.0% |
| !! | CTATTTTATTTCACCGAACG+GGG | + | chr1_2:6938286-6938305 | Msa0052640:intron | 35.0% |
| ATGAAATCATATTCCCCGTT+CGG | - | chr1_2:6938302-6938321 | None:intergenic | 35.0% | |
| !! | ATGATCACTTTTGGCAATCT+AGG | - | chr1_2:6938379-6938398 | None:intergenic | 35.0% |
| ! | GTCATAGTCATGATCACTTT+TGG | - | chr1_2:6938388-6938407 | None:intergenic | 35.0% |
| AAGTGATCATGACTATGACA+AGG | + | chr1_2:6938389-6938408 | Msa0052640:CDS | 35.0% | |
| AGTGATCATGACTATGACAA+GGG | + | chr1_2:6938390-6938409 | Msa0052640:CDS | 35.0% | |
| ! | TATTTGAGATATTGGACCGT+AGG | - | chr1_2:6938531-6938550 | None:intergenic | 35.0% |
| AACATTTATGACAGGCTTGA+AGG | - | chr1_2:6938679-6938698 | None:intergenic | 35.0% | |
| AAGCCTGTCATAAATGTTAC+TGG | + | chr1_2:6938681-6938700 | Msa0052640:CDS | 35.0% | |
| TCACCAGTAACATTTATGAC+AGG | - | chr1_2:6938687-6938706 | None:intergenic | 35.0% | |
| GAAGATTATTAAAGAAGGGG+AGG | + | chr1_2:6938722-6938741 | Msa0052640:CDS | 35.0% | |
| AATTACCGTCACGTTATCAA+GGG | - | chr1_2:6938926-6938945 | None:intergenic | 35.0% | |
| AAATTACCGTCACGTTATCA+AGG | - | chr1_2:6938927-6938946 | None:intergenic | 35.0% | |
| !! | GTTCATTTTAGCATACCTAG+TGG | + | chr1_2:6938977-6938996 | Msa0052640:intron | 35.0% |
| CTACGAAAAAGTCCTATTGT+AGG | + | chr1_2:6939153-6939172 | Msa0052640:intron | 35.0% | |
| CAAGAAAGTAAAAGAGGGAA+AGG | + | chr1_2:6939210-6939229 | Msa0052640:intron | 35.0% | |
| CAAAACCAATCAGTAAACAG+TGG | - | chr1_2:6939245-6939264 | None:intergenic | 35.0% | |
| ! | CTCATCGGTTACAAATTTCA+AGG | - | chr1_2:6939352-6939371 | None:intergenic | 35.0% |
| CTTGAAATTTGTAACCGATG+AGG | + | chr1_2:6939350-6939369 | Msa0052640:CDS | 35.0% | |
| AAGAATATACTCACCCTCAT+CGG | - | chr1_2:6939367-6939386 | None:intergenic | 35.0% | |
| ! | AAAAAGCATGCAAAGGATAG+TGG | - | chr1_2:6939402-6939421 | None:intergenic | 35.0% |
| TCTGTAGAACAAGTGATTAC+TGG | + | chr1_2:6939487-6939506 | Msa0052640:intron | 35.0% | |
| AACAATGAAGAAGGGTGAAA+GGG | + | chr1_2:6939528-6939547 | Msa0052640:CDS | 35.0% | |
| ! | ATCGGGATGTATACTGATTA+TGG | - | chr1_2:6939554-6939573 | None:intergenic | 35.0% |
| ! | ATACATCCCGATTATGCTTT+TGG | + | chr1_2:6939562-6939581 | Msa0052640:CDS | 35.0% |
| AGTGTATGACATTGAAATGG+TGG | + | chr1_2:6939636-6939655 | Msa0052640:CDS | 35.0% | |
| AGGAAATATATCCTCTTCCT+TGG | + | chr1_2:6939675-6939694 | Msa0052640:intron | 35.0% | |
| ! | TTTTCAATGGCGAAAATGCT+CGG | - | chr1_2:6939757-6939776 | None:intergenic | 35.0% |
| TTTCGCCATTGAAAATTGCA+AGG | + | chr1_2:6939762-6939781 | Msa0052640:intron | 35.0% | |
| TTCGCCATTGAAAATTGCAA+GGG | + | chr1_2:6939763-6939782 | Msa0052640:intron | 35.0% | |
| TGTCGACAATTACAATTTCG+AGG | + | chr1_2:6940063-6940082 | Msa0052640:intron | 35.0% | |
| GATGTGTCTATCTACATTAG+TGG | + | chr1_2:6940189-6940208 | Msa0052640:intron | 35.0% | |
| AATGAAAAAATTGAGGTGGC+TGG | + | chr1_2:6940278-6940297 | Msa0052640:CDS | 35.0% | |
| ATGAAAAAATTGAGGTGGCT+GGG | + | chr1_2:6940279-6940298 | Msa0052640:CDS | 35.0% | |
| TTAGCAGAGATGGATCTTTA+GGG | + | chr1_2:6940484-6940503 | Msa0052640:CDS | 35.0% | |
| CAGGAAAGTCATTCAGTTTA+AGG | - | chr1_2:6940575-6940594 | None:intergenic | 35.0% | |
| CTTAAACTGAATGACTTTCC+TGG | + | chr1_2:6940573-6940592 | Msa0052640:CDS | 35.0% | |
| AGCAATCAAACTATGTACTC+AGG | + | chr1_2:6940596-6940615 | Msa0052640:CDS | 35.0% | |
| ATTAACTCGACTTTGATGCT+TGG | - | chr1_2:6940681-6940700 | None:intergenic | 35.0% | |
| !! | CAGATCGGCTTTTCAAATTT+GGG | - | chr1_2:6940858-6940877 | None:intergenic | 35.0% |
| !! | ACAGATCGGCTTTTCAAATT+TGG | - | chr1_2:6940859-6940878 | None:intergenic | 35.0% |
| ATTTGAAAAGCCGATCTGTA+AGG | + | chr1_2:6940860-6940879 | Msa0052640:intron | 35.0% | |
| AGTCCAGTATAAACGAATTC+AGG | + | chr1_2:6940995-6941014 | Msa0052640:intron | 35.0% | |
| GTCCAGTATAAACGAATTCA+GGG | + | chr1_2:6940996-6941015 | Msa0052640:intron | 35.0% | |
| ATCCCTGAATTCGTTTATAC+TGG | - | chr1_2:6941001-6941020 | None:intergenic | 35.0% | |
| ATTGACCTAACAAACTGAAG+AGG | + | chr1_2:6941060-6941079 | Msa0052640:intron | 35.0% | |
| ! | AATCACCTCTTCAGTTTGTT+AGG | - | chr1_2:6941068-6941087 | None:intergenic | 35.0% |
| TGGCTACACTTATATAACTC+AGG | - | chr1_2:6941272-6941291 | None:intergenic | 35.0% | |
| ! | GCAAAAGCATATATAGAGAC+AGG | + | chr1_2:6941406-6941425 | Msa0052640:CDS | 35.0% |
| TATGTTTGCACCTAAGACAA+AGG | + | chr1_2:6941658-6941677 | Msa0052640:CDS | 35.0% | |
| CATGTGGTGTTTATAAAGCT+TGG | - | chr1_2:6941800-6941819 | None:intergenic | 35.0% | |
| ! | CAAGCTTTATAAACACCACA+TGG | + | chr1_2:6941798-6941817 | Msa0052640:intron | 35.0% |
| TCATTGTGTTGGATGTTAAG+GGG | - | chr1_2:6941854-6941873 | None:intergenic | 35.0% | |
| CTTCATTGTGTTGGATGTTA+AGG | - | chr1_2:6941856-6941875 | None:intergenic | 35.0% | |
| CTTAACATCCAACACAATGA+AGG | + | chr1_2:6941854-6941873 | Msa0052640:intron | 35.0% | |
| GAAACCCAAATACCACAATT+AGG | + | chr1_2:6941897-6941916 | Msa0052640:intron | 35.0% | |
| ATGTGACATAAGGTAACTGT+TGG | - | chr1_2:6941957-6941976 | None:intergenic | 35.0% | |
| ATTGAAGGTTGAGAAAGAAG+AGG | + | chr1_2:6942081-6942100 | Msa0052640:CDS | 35.0% | |
| AAAATGGAAATGGGCAATGT+TGG | + | chr1_2:6942115-6942134 | Msa0052640:CDS | 35.0% | |
| AAAATTAAACCGCCATCAGA+AGG | - | chr1_2:6942154-6942173 | None:intergenic | 35.0% | |
| GATGGTAGCTGCATAAATTT+CGG | + | chr1_2:6942239-6942258 | Msa0052640:three_prime_UTR | 35.0% | |
| TTTCGGATGAAAGTCTTACA+TGG | + | chr1_2:6942256-6942275 | Msa0052640:three_prime_UTR | 35.0% | |
| ATGTTGTTCGTCCAAAGATT+AGG | - | chr1_2:6942321-6942340 | None:intergenic | 35.0% | |
| AAGCTTCTCAAAATCGGACA+CGG | + | chr1_2:6936800-6936819 | Msa0052640:CDS | 40.0% | |
| AACATGATCGTTGAAGTTGG+GGG | - | chr1_2:6936834-6936853 | None:intergenic | 40.0% | |
| AACCAAATTGGGTTCTGCTA+GGG | + | chr1_2:6936987-6937006 | Msa0052640:CDS | 40.0% | |
| ! | TCTCCTGTCACATTTTCTCT+TGG | + | chr1_2:6937018-6937037 | Msa0052640:CDS | 40.0% |
| TGTCCAAGAGAAAATGTGAC+AGG | - | chr1_2:6937024-6937043 | None:intergenic | 40.0% | |
| ! | GTCACATTTTCTCTTGGACA+AGG | + | chr1_2:6937024-6937043 | Msa0052640:CDS | 40.0% |
| ! | GATTTTATGTGGGTGTCCTT+TGG | + | chr1_2:6937124-6937143 | Msa0052640:intron | 40.0% |
| TAACAATATCGGGCTCATTG+AGG | + | chr1_2:6937265-6937284 | Msa0052640:intron | 40.0% | |
| TCACCCAAAAACTAGCTCAA+AGG | - | chr1_2:6937349-6937368 | None:intergenic | 40.0% | |
| ATGACATTAGAGTCGGGTTA+AGG | + | chr1_2:6937389-6937408 | Msa0052640:intron | 40.0% | |
| ! | ACGAATTGTCAAATGGGCTT+TGG | - | chr1_2:6937444-6937463 | None:intergenic | 40.0% |
| CAATCAAAACACACGCTTAG+AGG | - | chr1_2:6937540-6937559 | None:intergenic | 40.0% | |
| TAGTGCAATGTATGGATTCG+CGG | - | chr1_2:6937667-6937686 | None:intergenic | 40.0% | |
| CGAATCCATACATTGCACTA+AGG | + | chr1_2:6937667-6937686 | Msa0052640:intron | 40.0% | |
| GCACTAAGGTGAATTGTTTG+TGG | + | chr1_2:6937681-6937700 | Msa0052640:intron | 40.0% | |
| AGGTGAATTGTTTGTGGTTC+AGG | + | chr1_2:6937687-6937706 | Msa0052640:intron | 40.0% | |
| GTGATAGGTGAATTGTATGC+TGG | + | chr1_2:6937736-6937755 | Msa0052640:intron | 40.0% | |
| AGGTGAATTGTATGCTGGAT+TGG | + | chr1_2:6937741-6937760 | Msa0052640:intron | 40.0% | |
| ! | TTGTATGCTGGATTGGATGA+TGG | + | chr1_2:6937748-6937767 | Msa0052640:CDS | 40.0% |
| ACATTACCTTCTGTTGTGTC+TGG | + | chr1_2:6937808-6937827 | Msa0052640:CDS | 40.0% | |
| AAGGACTTCATCAAGATCAC+CGG | - | chr1_2:6937968-6937987 | None:intergenic | 40.0% | |
| !! | ATCTCAACTTGTTGCCATGT+GGG | - | chr1_2:6938029-6938048 | None:intergenic | 40.0% |
| !! | AATCTCAACTTGTTGCCATG+TGG | - | chr1_2:6938030-6938049 | None:intergenic | 40.0% |
| TAGAATTCAACTCCTCCTTC+CGG | - | chr1_2:6938224-6938243 | None:intergenic | 40.0% | |
| GTGCAACTTAACAGTGTAAC+CGG | - | chr1_2:6938264-6938283 | None:intergenic | 40.0% | |
| ! | CCCGTTCGGTGAAATAAAAT+AGG | - | chr1_2:6938288-6938307 | None:intergenic | 40.0% |
| GTGATCATGACTATGACAAG+GGG | + | chr1_2:6938391-6938410 | Msa0052640:CDS | 40.0% | |
| TGGTGTATGTAGATGCCTTT+GGG | + | chr1_2:6938574-6938593 | Msa0052640:intron | 40.0% | |
| TTGAGTCTGGTGGAATTGAA+CGG | - | chr1_2:6938629-6938648 | None:intergenic | 40.0% | |
| !! | TTAACATGGAGCATTGAGTC+TGG | - | chr1_2:6938642-6938661 | None:intergenic | 40.0% |
| AAATGTTACTGGTGACTCCA+TGG | + | chr1_2:6938692-6938711 | Msa0052640:CDS | 40.0% | |
| ! | CAATGAGGGTGCAAATGTTA+CGG | + | chr1_2:6938758-6938777 | Msa0052640:CDS | 40.0% |
| ! | AATGAGGGTGCAAATGTTAC+GGG | + | chr1_2:6938759-6938778 | Msa0052640:CDS | 40.0% |
| !! | TCAAACCCTTGATAACGTGA+CGG | + | chr1_2:6938918-6938937 | Msa0052640:intron | 40.0% |
| ! | ACAACAAGTCTTTTCCCACT+AGG | - | chr1_2:6938995-6939014 | None:intergenic | 40.0% |
| !!! | TGTTGCTGCTTTTGTCGAAA+AGG | + | chr1_2:6939012-6939031 | Msa0052640:intron | 40.0% |
| GTAAAAGAGGGAAAGGAAGA+AGG | + | chr1_2:6939217-6939236 | Msa0052640:intron | 40.0% | |
| TACACAGCTATGCTAGAAGA+TGG | + | chr1_2:6939288-6939307 | Msa0052640:CDS | 40.0% | |
| GGCACTGTATTCGAAAAAAG+AGG | + | chr1_2:6939309-6939328 | Msa0052640:CDS | 40.0% | |
| ! | TGGGGTAAAAAAGCATGCAA+AGG | - | chr1_2:6939409-6939428 | None:intergenic | 40.0% |
| CAACAATGAAGAAGGGTGAA+AGG | + | chr1_2:6939527-6939546 | Msa0052640:CDS | 40.0% | |
| !! | TCATACACTACTTTTGAGCC+TGG | - | chr1_2:6939625-6939644 | None:intergenic | 40.0% |
| ! | CTTTGAGGAATTGGAGATCT+AGG | + | chr1_2:6939700-6939719 | Msa0052640:intron | 40.0% |
| CCATTGAAAATTGCAAGGGT+GGG | + | chr1_2:6939767-6939786 | Msa0052640:intron | 40.0% | |
| !! | ATTCATAGGAGAAAGCACCA+TGG | + | chr1_2:6940243-6940262 | Msa0052640:intron | 40.0% |
| !! | TTCATAGGAGAAAGCACCAT+GGG | + | chr1_2:6940244-6940263 | Msa0052640:intron | 40.0% |
| ! | AGCAGCGAAGAAGTATGATA+AGG | + | chr1_2:6940352-6940371 | Msa0052640:CDS | 40.0% |
| ! | AGCGAAGAAGTATGATAAGG+TGG | + | chr1_2:6940355-6940374 | Msa0052640:intron | 40.0% |
| TTCCATGATACCCATTTCTC+AGG | + | chr1_2:6940449-6940468 | Msa0052640:intron | 40.0% | |
| AAATCAGCAGCCTGAGAAAT+GGG | - | chr1_2:6940462-6940481 | None:intergenic | 40.0% | |
| AAAATCAGCAGCCTGAGAAA+TGG | - | chr1_2:6940463-6940482 | None:intergenic | 40.0% | |
| !! | GCTGATTTTGTTAGCAGAGA+TGG | + | chr1_2:6940474-6940493 | Msa0052640:CDS | 40.0% |
| GTTAGCAGAGATGGATCTTT+AGG | + | chr1_2:6940483-6940502 | Msa0052640:CDS | 40.0% | |
| TAGCAGAGATGGATCTTTAG+GGG | + | chr1_2:6940485-6940504 | Msa0052640:CDS | 40.0% | |
| AATCGTTGAGAGTTTCATGC+TGG | + | chr1_2:6940529-6940548 | Msa0052640:CDS | 40.0% | |
| ! | AGAGTTTCATGCTGGTTGAA+CGG | + | chr1_2:6940537-6940556 | Msa0052640:CDS | 40.0% |
| GTACATAGTTTGATTGCTCC+AGG | - | chr1_2:6940594-6940613 | None:intergenic | 40.0% | |
| ! | AAACAGCCAATCGACTCATT+TGG | + | chr1_2:6940620-6940639 | Msa0052640:intron | 40.0% |
| ACTATGCCAAATGAGTCGAT+TGG | - | chr1_2:6940629-6940648 | None:intergenic | 40.0% | |
| AAACCCATACAATCGTCTTC+AGG | - | chr1_2:6940770-6940789 | None:intergenic | 40.0% | |
| CGCTACTAAACCTTACAGAT+CGG | - | chr1_2:6940873-6940892 | None:intergenic | 40.0% | |
| ! | GTTTATACTGGACTCTGAGA+TGG | - | chr1_2:6940989-6941008 | None:intergenic | 40.0% |
| CCAGTGGCTTATAATATTGC+AGG | - | chr1_2:6941190-6941209 | None:intergenic | 40.0% | |
| CCTGCAATATTATAAGCCAC+TGG | + | chr1_2:6941187-6941206 | Msa0052640:intron | 40.0% | |
| ! | CATTTACTCTTTTGCACCAG+TGG | - | chr1_2:6941206-6941225 | None:intergenic | 40.0% |
| CACTGGTGCAAAAGAGTAAA+TGG | + | chr1_2:6941204-6941223 | Msa0052640:intron | 40.0% | |
| AGACATCAAGAAAGCTCTTG+AGG | + | chr1_2:6941450-6941469 | Msa0052640:CDS | 40.0% | |
| ! | TGGTTTTTCATTTTCCAGGG+AGG | + | chr1_2:6941562-6941581 | Msa0052640:intron | 40.0% |
| ! | TTCATTTTCCAGGGAGGTAA+AGG | + | chr1_2:6941568-6941587 | Msa0052640:intron | 40.0% |
| CGAACTCAACCTTACAAAAC+CGG | + | chr1_2:6941755-6941774 | Msa0052640:intron | 40.0% | |
| ATTGCTTGATATGACCCATG+TGG | - | chr1_2:6941816-6941835 | None:intergenic | 40.0% | |
| ATGGGTCATATCAAGCAATG+AGG | + | chr1_2:6941817-6941836 | Msa0052640:intron | 40.0% | |
| TGGGTCATATCAAGCAATGA+GGG | + | chr1_2:6941818-6941837 | Msa0052640:intron | 40.0% | |
| ! | ATCCAACACAATGAAGGTGT+TGG | + | chr1_2:6941860-6941879 | Msa0052640:intron | 40.0% |
| ACCCAAATACCACAATTAGG+CGG | + | chr1_2:6941900-6941919 | Msa0052640:intron | 40.0% | |
| TGTTCTCAAGCAGAGATTGA+AGG | + | chr1_2:6942066-6942085 | Msa0052640:intron | 40.0% | |
| AAGGTTGAGAAAGAAGAGGA+TGG | + | chr1_2:6942085-6942104 | Msa0052640:CDS | 40.0% | |
| AGGTTGAGAAAGAAGAGGAT+GGG | + | chr1_2:6942086-6942105 | Msa0052640:CDS | 40.0% | |
| CGCAAAGATGGCAGTGTTAT+CGG | + | chr1_2:6936667-6936686 | Msa0052640:exon | 45.0% | |
| GATGAACTGGATGAAGAACC+AGG | + | chr1_2:6936701-6936720 | Msa0052640:CDS | 45.0% | |
| TTCTCAAAATCGGACACGGT+TGG | + | chr1_2:6936804-6936823 | Msa0052640:CDS | 45.0% | |
| TCTCAAAATCGGACACGGTT+GGG | + | chr1_2:6936805-6936824 | Msa0052640:CDS | 45.0% | |
| GAACCAAATTGGGTTCTGCT+AGG | + | chr1_2:6936986-6937005 | Msa0052640:CDS | 45.0% | |
| ATCCCTAGCAGAACCCAATT+TGG | - | chr1_2:6936992-6937011 | None:intergenic | 45.0% | |
| CAAGAGAACCTTGGCAATGT+GGG | - | chr1_2:6937184-6937203 | None:intergenic | 45.0% | |
| ACAAGAGAACCTTGGCAATG+TGG | - | chr1_2:6937185-6937204 | None:intergenic | 45.0% | |
| TACCTCCCTGTGTTAGGATT+GGG | - | chr1_2:6937234-6937253 | None:intergenic | 45.0% | |
| CATTAGAGTCGGGTTAAGGA+TGG | + | chr1_2:6937393-6937412 | Msa0052640:intron | 45.0% | |
| ! | GCTTTGGATCTCACTCTCAA+AGG | - | chr1_2:6937428-6937447 | None:intergenic | 45.0% |
| ! | ACGGTGTGTCTCCGTAATTT+TGG | - | chr1_2:6937628-6937647 | None:intergenic | 45.0% |
| GGAATCGTCACCATGAAGAA+AGG | + | chr1_2:6937769-6937788 | Msa0052640:CDS | 45.0% | |
| ATGCTTCCAGACACAACAGA+AGG | - | chr1_2:6937817-6937836 | None:intergenic | 45.0% | |
| CATTCCACAAGACTCCAACT+CGG | + | chr1_2:6937834-6937853 | Msa0052640:CDS | 45.0% | |
| CTCAAATTGCACAACCGAGT+TGG | - | chr1_2:6937851-6937870 | None:intergenic | 45.0% | |
| CAACTCGGTTGTGCAATTTG+AGG | + | chr1_2:6937849-6937868 | Msa0052640:CDS | 45.0% | |
| TTGAGGTGGAACTCGTTTCT+TGG | + | chr1_2:6937866-6937885 | Msa0052640:CDS | 45.0% | |
| GGAACTCGTTTCTTGGATCA+CGG | + | chr1_2:6937873-6937892 | Msa0052640:CDS | 45.0% | |
| !! | GTGGTGGATGTTTGCAAAGA+TGG | + | chr1_2:6937895-6937914 | Msa0052640:CDS | 45.0% |
| GTGGATGTTTGCAAAGATGG+TGG | + | chr1_2:6937898-6937917 | Msa0052640:CDS | 45.0% | |
| AGGACTTCATCAAGATCACC+GGG | - | chr1_2:6937967-6937986 | None:intergenic | 45.0% | |
| GGTGATCTTGATGAAGTCCT+TGG | + | chr1_2:6937967-6937986 | Msa0052640:CDS | 45.0% | |
| AAGCAGCTGATAGACTACCA+AGG | - | chr1_2:6937987-6938006 | None:intergenic | 45.0% | |
| TATCAGGTGGCACTTGAAGA+TGG | + | chr1_2:6938179-6938198 | Msa0052640:CDS | 45.0% | |
| CACTGTTGTTGCAGAAACTC+CGG | + | chr1_2:6938202-6938221 | Msa0052640:CDS | 45.0% | |
| GGGTTAAGTAGAAGAACGAG+AGG | - | chr1_2:6938454-6938473 | None:intergenic | 45.0% | |
| GTGGTGTATGTAGATGCCTT+TGG | + | chr1_2:6938573-6938592 | Msa0052640:intron | 45.0% | |
| GGTGTATGTAGATGCCTTTG+GGG | + | chr1_2:6938575-6938594 | Msa0052640:intron | 45.0% | |
| CGTAACATTTGCACCCTCAT+TGG | - | chr1_2:6938760-6938779 | None:intergenic | 45.0% | |
| AGGAGCCACTGTTTACTGAT+TGG | + | chr1_2:6939237-6939256 | Msa0052640:intron | 45.0% | |
| AGCATAGCTGTGTATCTGAC+TGG | - | chr1_2:6939282-6939301 | None:intergenic | 45.0% | |
| TCTTCATTGTTGCCACTGCT+CGG | - | chr1_2:6939519-6939538 | None:intergenic | 45.0% | |
| AGCAGTGGCAACAATGAAGA+AGG | + | chr1_2:6939519-6939538 | Msa0052640:CDS | 45.0% | |
| GCAGTGGCAACAATGAAGAA+GGG | + | chr1_2:6939520-6939539 | Msa0052640:CDS | 45.0% | |
| !! | TACACTACTTTTGAGCCTGG+TGG | - | chr1_2:6939622-6939641 | None:intergenic | 45.0% |
| !! | TCCTTGGTGCTTTGAGGAAT+TGG | + | chr1_2:6939691-6939710 | Msa0052640:intron | 45.0% |
| ! | TCCAATTCCTCAAAGCACCA+AGG | - | chr1_2:6939695-6939714 | None:intergenic | 45.0% |
| GCCATTGAAAATTGCAAGGG+TGG | + | chr1_2:6939766-6939785 | Msa0052640:intron | 45.0% | |
| ! | CCCACCCTTGCAATTTTCAA+TGG | - | chr1_2:6939770-6939789 | None:intergenic | 45.0% |
| AAAAAATTGAGGTGGCTGGG+AGG | + | chr1_2:6940282-6940301 | Msa0052640:CDS | 45.0% | |
| AGCCTGAGAAATGGGTATCA+TGG | - | chr1_2:6940454-6940473 | None:intergenic | 45.0% | |
| ! | TGGATCTTTAGGGGATGATG+AGG | + | chr1_2:6940494-6940513 | Msa0052640:CDS | 45.0% |
| GAGCCTGAAGACGATTGTAT+GGG | + | chr1_2:6940764-6940783 | Msa0052640:intron | 45.0% | |
| TGGGATCTTAGATGCATCAG+TGG | - | chr1_2:6940930-6940949 | None:intergenic | 45.0% | |
| GTGATTGAACCGAAGTCTTC+TGG | + | chr1_2:6941082-6941101 | Msa0052640:intron | 45.0% | |
| CATACCAGACCAGAAGACTT+CGG | - | chr1_2:6941094-6941113 | None:intergenic | 45.0% | |
| CATCAAGAAAGCTCTTGAGG+TGG | + | chr1_2:6941453-6941472 | Msa0052640:CDS | 45.0% | |
| TTGAGGTGGATCCACAAAAC+AGG | + | chr1_2:6941467-6941486 | Msa0052640:CDS | 45.0% | |
| CTTTAGTACCTTTACCTCCC+TGG | - | chr1_2:6941579-6941598 | None:intergenic | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr1_2:6941767-6941786 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr1_2:6941764-6941783 | Msa0052640:intron | 45.0% |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | + | chr1_2:6941770-6941789 | Msa0052640:intron | 45.0% |
| TTGTGTTGGATGTTAAGGGG+TGG | - | chr1_2:6941851-6941870 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | - | chr1_2:6941865-6941884 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr1_2:6941863-6941882 | Msa0052640:intron | 45.0% |
| GCCGCCTAATTGTGGTATTT+GGG | - | chr1_2:6941904-6941923 | None:intergenic | 45.0% | |
| AGCCGCCTAATTGTGGTATT+TGG | - | chr1_2:6941905-6941924 | None:intergenic | 45.0% | |
| AATACCACAATTAGGCGGCT+AGG | + | chr1_2:6941905-6941924 | Msa0052640:intron | 45.0% | |
| ATACCACAATTAGGCGGCTA+GGG | + | chr1_2:6941906-6941925 | Msa0052640:intron | 45.0% | |
| GGTTGAGAAAGAAGAGGATG+GGG | + | chr1_2:6942087-6942106 | Msa0052640:CDS | 45.0% | |
| TGGGGTGGTGAAAATGGAAA+TGG | + | chr1_2:6942105-6942124 | Msa0052640:CDS | 45.0% | |
| GGGGTGGTGAAAATGGAAAT+GGG | + | chr1_2:6942106-6942125 | Msa0052640:CDS | 45.0% | |
| !!! | ATTACATTTATTATTATTTT+AGG | + | chr1_2:6941297-6941316 | Msa0052640:intron | 5.0% |
| TCAGCACCACCTCAAAAGCT+CGG | + | chr1_2:6936737-6936756 | Msa0052640:CDS | 50.0% | |
| ! | CTTTCTTCGCCGAGCTTTTG+AGG | - | chr1_2:6936749-6936768 | None:intergenic | 50.0% |
| CTCAAAAGCTCGGCGAAGAA+AGG | + | chr1_2:6936747-6936766 | Msa0052640:CDS | 50.0% | |
| CTTCTTCTTGATCGGCGAGT+TGG | - | chr1_2:6936783-6936802 | None:intergenic | 50.0% | |
| TACCCAATCCTAACACAGGG+AGG | + | chr1_2:6937229-6937248 | Msa0052640:intron | 50.0% | |
| CTACCTCCCTGTGTTAGGAT+TGG | - | chr1_2:6937235-6937254 | None:intergenic | 50.0% | |
| AGTCACTACCTCCCTGTGTT+AGG | - | chr1_2:6937240-6937259 | None:intergenic | 50.0% | |
| TCGGGCTCATTGAGGCTAAT+TGG | + | chr1_2:6937273-6937292 | Msa0052640:intron | 50.0% | |
| TCCCTTAACGAGTGTGTGCT+TGG | + | chr1_2:6937313-6937332 | Msa0052640:intron | 50.0% | |
| CCCAAGCACACACTCGTTAA+GGG | - | chr1_2:6937317-6937336 | None:intergenic | 50.0% | |
| CCCTTAACGAGTGTGTGCTT+GGG | + | chr1_2:6937314-6937333 | Msa0052640:intron | 50.0% | |
| CGTCACCATGAAGAAAGGAG+AGG | + | chr1_2:6937774-6937793 | Msa0052640:CDS | 50.0% | |
| CACCATGAAGAAAGGAGAGG+TGG | + | chr1_2:6937777-6937796 | Msa0052640:CDS | 50.0% | |
| TGCCACCTCTCCTTTCTTCA+TGG | - | chr1_2:6937782-6937801 | None:intergenic | 50.0% | |
| ! | ACAACCGAGTTGGAGTCTTG+TGG | - | chr1_2:6937841-6937860 | None:intergenic | 50.0% |
| CTCGGTTGTGCAATTTGAGG+TGG | + | chr1_2:6937852-6937871 | Msa0052640:CDS | 50.0% | |
| ACTCGTTTCTTGGATCACGG+TGG | + | chr1_2:6937876-6937895 | Msa0052640:CDS | 50.0% | |
| GTTGTTGCAGAAACTCCGGA+AGG | + | chr1_2:6938206-6938225 | Msa0052640:CDS | 50.0% | |
| ! | TGTAGATGCCTTTGGGGAGA+AGG | + | chr1_2:6938581-6938600 | Msa0052640:intron | 50.0% |
| ! | GTAGATGCCTTTGGGGAGAA+GGG | + | chr1_2:6938582-6938601 | Msa0052640:intron | 50.0% |
| ! | TAGATGCCTTTGGGGAGAAG+GGG | + | chr1_2:6938583-6938602 | Msa0052640:intron | 50.0% |
| !! | ACATGGAGCATTGAGTCTGG+TGG | - | chr1_2:6938639-6938658 | None:intergenic | 50.0% |
| GGTGCTTTCACAGCCAATGA+GGG | + | chr1_2:6938744-6938763 | Msa0052640:CDS | 50.0% | |
| AGCTGTGTATCTGACTGGCA+TGG | - | chr1_2:6939277-6939296 | None:intergenic | 50.0% | |
| !! | TACTGGTTTAGACCGAGCAG+TGG | + | chr1_2:6939504-6939523 | Msa0052640:CDS | 50.0% |
| !! | GATCTTGCTATTGTGCCACC+AGG | + | chr1_2:6939604-6939623 | Msa0052640:CDS | 50.0% |
| !! | TCCTCTTCCTTGGTGCTTTG+AGG | + | chr1_2:6939685-6939704 | Msa0052640:intron | 50.0% |
| ! | TCCTCAAAGCACCAAGGAAG+AGG | - | chr1_2:6939689-6939708 | None:intergenic | 50.0% |
| GCTGGGAGGAAGAAAGAAGA+AGG | + | chr1_2:6940296-6940315 | Msa0052640:CDS | 50.0% | |
| CGAGCCTGAAGACGATTGTA+TGG | + | chr1_2:6940763-6940782 | Msa0052640:intron | 50.0% | |
| TGAACCGAAGTCTTCTGGTC+TGG | + | chr1_2:6941087-6941106 | Msa0052640:intron | 50.0% | |
| CGAAGTCTTCTGGTCTGGTA+TGG | + | chr1_2:6941092-6941111 | Msa0052640:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr1_2:6941769-6941788 | Msa0052640:intron | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | + | chr1_2:6941875-6941894 | Msa0052640:intron | 50.0% |
| TGGCAATTCCGCCTTCATTG+CGG | - | chr1_2:6941937-6941956 | None:intergenic | 50.0% | |
| TGAGAAAGAAGAGGATGGGG+TGG | + | chr1_2:6942090-6942109 | Msa0052640:CDS | 50.0% | |
| AGAGGATGGGGTGGTGAAAA+TGG | + | chr1_2:6942099-6942118 | Msa0052640:CDS | 50.0% | |
| !! | GCTGATTCGATGACTTCGCC+TGG | - | chr1_2:6936722-6936741 | None:intergenic | 55.0% |
| !! | TCTTCGCCGAGCTTTTGAGG+TGG | - | chr1_2:6936746-6936765 | None:intergenic | 55.0% |
| ATCGGAGTCCCACATTGCCA+AGG | + | chr1_2:6937173-6937192 | Msa0052640:intron | 55.0% | |
| GCCCAAGCACACACTCGTTA+AGG | - | chr1_2:6937318-6937337 | None:intergenic | 55.0% | |
| GTATGGATTCGCGGTGAGCT+CGG | - | chr1_2:6937658-6937677 | None:intergenic | 55.0% | |
| CGTTTCTTGGATCACGGTGG+TGG | + | chr1_2:6937879-6937898 | Msa0052640:CDS | 55.0% | |
| GGGAAAGGGAATGATCGACC+CGG | + | chr1_2:6937946-6937965 | Msa0052640:CDS | 55.0% | |
| GTTGCAGAAACTCCGGAAGG+AGG | + | chr1_2:6938209-6938228 | Msa0052640:CDS | 55.0% | |
| ! | AGAACGAGAGGCGTACACTG+AGG | - | chr1_2:6938442-6938461 | None:intergenic | 55.0% |
| TTCACTCCCCTTCTCCCCAA+AGG | - | chr1_2:6938592-6938611 | None:intergenic | 55.0% | |
| GGGTGCTTTCACAGCCAATG+AGG | + | chr1_2:6938743-6938762 | Msa0052640:CDS | 55.0% | |
| GCAACCCTCACCTTACAAGC+CGG | - | chr1_2:6941777-6941796 | None:intergenic | 55.0% | |
| CACAATTAGGCGGCTAGGGA+CGG | + | chr1_2:6941910-6941929 | Msa0052640:intron | 55.0% | |
| CGGTGAGCTCGGCAGATTCA+CGG | - | chr1_2:6937647-6937666 | None:intergenic | 60.0% | |
| AAGGGGAGTGAAGCTGGCAG+CGG | + | chr1_2:6938600-6938619 | Msa0052640:CDS | 60.0% | |
| CGTCCCTAGCCGCCTAATTG+TGG | - | chr1_2:6941912-6941931 | None:intergenic | 60.0% | |
| CTAGGGACGGACCGCAATGA+AGG | + | chr1_2:6941923-6941942 | Msa0052640:intron | 60.0% | |
| GACAGCGCAGCTCCTTCTGA+TGG | + | chr1_2:6942139-6942158 | Msa0052640:CDS | 60.0% | |
| AGCGCAGCTCCTTCTGATGG+CGG | + | chr1_2:6942142-6942161 | Msa0052640:CDS | 60.0% | |
| GGGGAGAAGGGGAGTGAAGC+TGG | + | chr1_2:6938594-6938613 | Msa0052640:CDS | 65.0% | |
| AGGGGAGTGAAGCTGGCAGC+GGG | + | chr1_2:6938601-6938620 | Msa0052640:CDS | 65.0% | |
| GGGACGGACCGCAATGAAGG+CGG | + | chr1_2:6941926-6941945 | Msa0052640:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6936648 | 6942348 | 6936648 | ID=Msa0052640;Name=Msa0052640 |
| chr1_2 | mRNA | 6936648 | 6942348 | 6936648 | ID=Msa0052640-mRNA-1;Parent=Msa0052640;Name=Msa0052640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|13|162|581 |
| chr1_2 | exon | 6936648 | 6936857 | 6936648 | ID=Msa0052640-mRNA-1:exon:2298;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6936959 | 6937045 | 6936959 | ID=Msa0052640-mRNA-1:exon:2299;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6937743 | 6937988 | 6937743 | ID=Msa0052640-mRNA-1:exon:2300;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6938174 | 6938254 | 6938174 | ID=Msa0052640-mRNA-1:exon:2301;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6938365 | 6938445 | 6938365 | ID=Msa0052640-mRNA-1:exon:2302;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6938586 | 6938780 | 6938586 | ID=Msa0052640-mRNA-1:exon:2303;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6939283 | 6939372 | 6939283 | ID=Msa0052640-mRNA-1:exon:2304;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6939494 | 6939669 | 6939494 | ID=Msa0052640-mRNA-1:exon:2305;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6940251 | 6940373 | 6940251 | ID=Msa0052640-mRNA-1:exon:2306;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6940471 | 6940617 | 6940471 | ID=Msa0052640-mRNA-1:exon:2307;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6941361 | 6941488 | 6941361 | ID=Msa0052640-mRNA-1:exon:2308;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6941580 | 6941679 | 6941580 | ID=Msa0052640-mRNA-1:exon:2309;Parent=Msa0052640-mRNA-1 |
| chr1_2 | exon | 6942079 | 6942348 | 6942079 | ID=Msa0052640-mRNA-1:exon:2310;Parent=Msa0052640-mRNA-1 |
| chr1_2 | five_prime_UTR | 6936648 | 6936673 | 6936648 | ID=Msa0052640-mRNA-1:five_prime_utr;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6936674 | 6936857 | 6936674 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6936959 | 6937045 | 6936959 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6937743 | 6937988 | 6937743 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6938174 | 6938254 | 6938174 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6938365 | 6938445 | 6938365 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6938586 | 6938780 | 6938586 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6939283 | 6939372 | 6939283 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6939494 | 6939669 | 6939494 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6940251 | 6940373 | 6940251 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6940471 | 6940617 | 6940471 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6941361 | 6941488 | 6941361 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6941580 | 6941679 | 6941580 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | CDS | 6942079 | 6942186 | 6942079 | ID=Msa0052640-mRNA-1:cds;Parent=Msa0052640-mRNA-1 |
| chr1_2 | three_prime_UTR | 6942187 | 6942348 | 6942187 | ID=Msa0052640-mRNA-1:three_prime_utr;Parent=Msa0052640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
