Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159180 | sp|Q67XL4|Y3544_ARATH | 54.725 | 455 | 157 | 11 | 18 | 444 | 11 | 444 | 2.36e-144 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159180 | G7I7W0 | 96.171 | 444 | 16 | 1 | 1 | 444 | 1 | 443 | 0.0 | 850 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0159180 | 0.802074 | 6.667581e-49 | -8.615850e-47 |
| Msa0011960 | Msa0159180 | 0.821720 | 3.474570e-53 | -8.615850e-47 |
| Msa0012040 | Msa0159180 | 0.836406 | 9.535375e-57 | -8.615850e-47 |
| Msa0015610 | Msa0159180 | 0.812934 | 3.302416e-51 | -8.615850e-47 |
| Msa0020300 | Msa0159180 | 0.961458 | 1.003532e-119 | -8.615850e-47 |
| Msa0020410 | Msa0159180 | 0.805406 | 1.355777e-49 | -8.615850e-47 |
| Msa0026710 | Msa0159180 | 0.832278 | 1.035652e-55 | -8.615850e-47 |
| Msa0028660 | Msa0159180 | 0.817251 | 3.632705e-52 | -8.615850e-47 |
| Msa0037700 | Msa0159180 | 0.806416 | 8.315832e-50 | -8.615850e-47 |
| Msa0037880 | Msa0159180 | 0.806610 | 7.565803e-50 | -8.615850e-47 |
| Msa0043980 | Msa0159180 | 0.822954 | 1.796791e-53 | -8.615850e-47 |
| Msa0052640 | Msa0159180 | 0.818695 | 1.713663e-52 | -8.615850e-47 |
| Msa0052770 | Msa0159180 | 0.836998 | 6.737054e-57 | -8.615850e-47 |
| Msa0054480 | Msa0159180 | 0.800656 | 1.301061e-48 | -8.615850e-47 |
| Msa0054750 | Msa0159180 | 0.805660 | 1.198953e-49 | -8.615850e-47 |
| Msa0058300 | Msa0159180 | 0.821046 | 4.971810e-53 | -8.615850e-47 |
| Msa0061080 | Msa0159180 | 0.817063 | 4.005383e-52 | -8.615850e-47 |
| Msa0063530 | Msa0159180 | 0.814656 | 1.378603e-51 | -8.615850e-47 |
| Msa0067620 | Msa0159180 | 0.878201 | 3.402331e-69 | -8.615850e-47 |
| Msa0076260 | Msa0159180 | 0.801343 | 9.414373e-49 | -8.615850e-47 |
| Msa0089820 | Msa0159180 | 0.804984 | 1.661682e-49 | -8.615850e-47 |
| Msa0090360 | Msa0159180 | 0.814664 | 1.373300e-51 | -8.615850e-47 |
| Msa0094470 | Msa0159180 | 0.809072 | 2.267257e-50 | -8.615850e-47 |
| Msa0094920 | Msa0159180 | 0.810769 | 9.774859e-51 | -8.615850e-47 |
| Msa0097780 | Msa0159180 | 0.829116 | 6.161326e-55 | -8.615850e-47 |
| Msa0101700 | Msa0159180 | 0.827890 | 1.218548e-54 | -8.615850e-47 |
| Msa0101710 | Msa0159180 | 0.800454 | 1.430127e-48 | -8.615850e-47 |
| Msa0101900 | Msa0159180 | 0.807852 | 4.128880e-50 | -8.615850e-47 |
| Msa0105620 | Msa0159180 | 0.814107 | 1.823224e-51 | -8.615850e-47 |
| Msa0106670 | Msa0159180 | 0.802063 | 6.699978e-49 | -8.615850e-47 |
| Msa0113750 | Msa0159180 | 0.956274 | 4.337938e-114 | -8.615850e-47 |
| Msa0115270 | Msa0159180 | 0.808865 | 2.510919e-50 | -8.615850e-47 |
| Msa0137840 | Msa0159180 | 0.816033 | 6.811366e-52 | -8.615850e-47 |
| Msa0140650 | Msa0159180 | 0.807522 | 4.851038e-50 | -8.615850e-47 |
| Msa0142980 | Msa0159180 | 0.805366 | 1.381844e-49 | -8.615850e-47 |
| Msa0144540 | Msa0159180 | 0.822132 | 2.789801e-53 | -8.615850e-47 |
| Msa0150820 | Msa0159180 | 0.829899 | 3.976223e-55 | -8.615850e-47 |
| Msa0157100 | Msa0159180 | 0.805130 | 1.548710e-49 | -8.615850e-47 |
| Msa0159180 | Msa0159220 | 0.955079 | 6.910699e-113 | -8.615850e-47 |
| Msa0159180 | Msa0160550 | 0.824418 | 8.157428e-54 | -8.615850e-47 |
| Msa0159180 | Msa0180500 | 0.808712 | 2.706757e-50 | -8.615850e-47 |
| Msa0159180 | Msa0184040 | 0.815336 | 9.738181e-52 | -8.615850e-47 |
| Msa0159180 | Msa0184780 | 0.809118 | 2.215886e-50 | -8.615850e-47 |
| Msa0159180 | Msa0194480 | 0.816542 | 5.240855e-52 | -8.615850e-47 |
| Msa0159180 | Msa0194950 | -0.801630 | 8.224355e-49 | -8.615850e-47 |
| Msa0159180 | Msa0199880 | 0.800313 | 1.528005e-48 | -8.615850e-47 |
| Msa0159180 | Msa0206010 | 0.815040 | 1.133054e-51 | -8.615850e-47 |
| Msa0159180 | Msa0212930 | 0.805701 | 1.175812e-49 | -8.615850e-47 |
| Msa0159180 | Msa0217680 | 0.820656 | 6.113196e-53 | -8.615850e-47 |
| Msa0159180 | Msa0220440 | 0.816132 | 6.473893e-52 | -8.615850e-47 |
| Msa0159180 | Msa0220720 | 0.802190 | 6.310277e-49 | -8.615850e-47 |
| Msa0159180 | Msa0223010 | 0.809727 | 1.640374e-50 | -8.615850e-47 |
| Msa0159180 | Msa0228070 | 0.830962 | 2.184987e-55 | -8.615850e-47 |
| Msa0159180 | Msa0233350 | 0.801162 | 1.025283e-48 | -8.615850e-47 |
| Msa0159180 | Msa0242410 | 0.808800 | 2.591583e-50 | -8.615850e-47 |
| Msa0159180 | Msa0253200 | 0.816575 | 5.153048e-52 | -8.615850e-47 |
| Msa0159180 | Msa0255080 | 0.810353 | 1.202389e-50 | -8.615850e-47 |
| Msa0159180 | Msa0260210 | 0.809642 | 1.710914e-50 | -8.615850e-47 |
| Msa0159180 | Msa0261720 | 0.825845 | 3.752614e-54 | -8.615850e-47 |
| Msa0159180 | Msa0262050 | 0.813217 | 2.861833e-51 | -8.615850e-47 |
| Msa0159180 | Msa0262310 | 0.808631 | 2.817258e-50 | -8.615850e-47 |
| Msa0159180 | Msa0264330 | 0.807474 | 4.966917e-50 | -8.615850e-47 |
| Msa0159180 | Msa0279220 | 0.813624 | 2.329143e-51 | -8.615850e-47 |
| Msa0159180 | Msa0279240 | 0.818562 | 1.837239e-52 | -8.615850e-47 |
| Msa0159180 | Msa0287410 | 0.814590 | 1.426151e-51 | -8.615850e-47 |
| Msa0159180 | Msa0289250 | 0.802266 | 6.087857e-49 | -8.615850e-47 |
| Msa0159180 | Msa0292030 | 0.817485 | 3.218893e-52 | -8.615850e-47 |
| Msa0159180 | Msa0298700 | 0.824307 | 8.664298e-54 | -8.615850e-47 |
| Msa0159180 | Msa0299580 | 0.811287 | 7.550421e-51 | -8.615850e-47 |
| Msa0159180 | Msa0304290 | 0.804403 | 2.196825e-49 | -8.615850e-47 |
| Msa0159180 | Msa0304330 | 0.811271 | 7.611555e-51 | -8.615850e-47 |
| Msa0159180 | Msa0309770 | 0.827975 | 1.162667e-54 | -8.615850e-47 |
| Msa0159180 | Msa0318980 | 0.820212 | 7.728586e-53 | -8.615850e-47 |
| Msa0159180 | Msa0326110 | 0.809681 | 1.678164e-50 | -8.615850e-47 |
| Msa0159180 | Msa0336420 | 0.810191 | 1.303398e-50 | -8.615850e-47 |
| Msa0159180 | Msa0337240 | 0.807674 | 4.503794e-50 | -8.615850e-47 |
| Msa0159180 | Msa0339620 | 0.818614 | 1.788470e-52 | -8.615850e-47 |
| Msa0159180 | Msa0345350 | 0.812847 | 3.450876e-51 | -8.615850e-47 |
| Msa0159180 | Msa0366890 | 0.805830 | 1.104281e-49 | -8.615850e-47 |
| Msa0159180 | Msa0372660 | 0.816812 | 4.558493e-52 | -8.615850e-47 |
| Msa0159180 | Msa0372670 | 0.815064 | 1.119677e-51 | -8.615850e-47 |
| Msa0159180 | Msa0376300 | 0.806646 | 7.436730e-50 | -8.615850e-47 |
| Msa0159180 | Msa0376310 | 0.801368 | 9.307020e-49 | -8.615850e-47 |
| Msa0159180 | Msa0383800 | 0.817175 | 3.778415e-52 | -8.615850e-47 |
| Msa0159180 | Msa0385580 | 0.800570 | 1.354464e-48 | -8.615850e-47 |
| Msa0159180 | Msa0387750 | 0.812085 | 5.063424e-51 | -8.615850e-47 |
| Msa0159180 | Msa0388050 | 0.845608 | 3.651970e-59 | -8.615850e-47 |
| Msa0159180 | Msa0388700 | 0.812578 | 3.951595e-51 | -8.615850e-47 |
| Msa0159180 | Msa0397540 | 0.824262 | 8.876949e-54 | -8.615850e-47 |
| Msa0159180 | Msa0398950 | 0.815753 | 7.864008e-52 | -8.615850e-47 |
| Msa0159180 | Msa0402790 | 0.801528 | 8.630319e-49 | -8.615850e-47 |
| Msa0159180 | Msa0433360 | 0.816503 | 5.347482e-52 | -8.615850e-47 |
| Msa0159180 | Msa0433640 | 0.825109 | 5.606798e-54 | -8.615850e-47 |
| Msa0159180 | Msa0442190 | 0.810802 | 9.618439e-51 | -8.615850e-47 |
| Msa0159180 | Msa0442200 | 0.819145 | 1.354246e-52 | -8.615850e-47 |
| Msa0159180 | Msa0446580 | 0.805197 | 1.499554e-49 | -8.615850e-47 |
| Msa0159180 | Msa0453200 | 0.803225 | 3.858846e-49 | -8.615850e-47 |
| Msa0159180 | Msa0474010 | 0.800631 | 1.316123e-48 | -8.615850e-47 |
| Msa0159180 | Msa0477080 | 0.826472 | 2.663358e-54 | -8.615850e-47 |
| Msa0159180 | Msa0481530 | 0.823862 | 1.101970e-53 | -8.615850e-47 |
| Msa0159180 | Msa0485120 | 0.832015 | 1.202643e-55 | -8.615850e-47 |
| Msa0159180 | Msa0493410 | 0.804090 | 2.552524e-49 | -8.615850e-47 |
| Msa0159180 | Msa0502880 | 0.813381 | 2.634223e-51 | -8.615850e-47 |
| Msa0159180 | Msa0503200 | 0.807533 | 4.826444e-50 | -8.615850e-47 |
| Msa0159180 | Msa0512340 | 0.813919 | 2.005768e-51 | -8.615850e-47 |
| Msa0159180 | Msa0512750 | 0.801148 | 1.032400e-48 | -8.615850e-47 |
| Msa0159180 | Msa0521500 | 0.809595 | 1.751155e-50 | -8.615850e-47 |
| Msa0159180 | Msa0521540 | 0.807914 | 4.004950e-50 | -8.615850e-47 |
| Msa0159180 | Msa0522070 | 0.812564 | 3.978517e-51 | -8.615850e-47 |
| Msa0159180 | Msa0529890 | 0.828616 | 8.143388e-55 | -8.615850e-47 |
| Msa0159180 | Msa0541360 | 0.813631 | 2.321266e-51 | -8.615850e-47 |
| Msa0159180 | Msa0542290 | 0.802495 | 5.460232e-49 | -8.615850e-47 |
| Msa0159180 | Msa0548240 | 0.817561 | 3.093062e-52 | -8.615850e-47 |
| Msa0159180 | Msa0550430 | 0.815676 | 8.181945e-52 | -8.615850e-47 |
| Msa0159180 | Msa0555450 | 0.836812 | 7.515855e-57 | -8.615850e-47 |
| Msa0159180 | Msa0556060 | 0.818967 | 1.486302e-52 | -8.615850e-47 |
| Msa0159180 | Msa0561230 | 0.800819 | 1.205045e-48 | -8.615850e-47 |
| Msa0159180 | Msa0575470 | 0.800372 | 1.486178e-48 | -8.615850e-47 |
| Msa0159180 | Msa0585560 | 0.813980 | 1.945121e-51 | -8.615850e-47 |
| Msa0159180 | Msa0602390 | 0.812311 | 4.518253e-51 | -8.615850e-47 |
| Msa0159180 | Msa0608160 | 0.812432 | 4.251863e-51 | -8.615850e-47 |
| Msa0159180 | Msa0610430 | 0.842753 | 2.132524e-58 | -8.615850e-47 |
| Msa0159180 | Msa0615490 | 0.835780 | 1.375044e-56 | -8.615850e-47 |
| Msa0159180 | Msa0625720 | 0.828990 | 6.611045e-55 | -8.615850e-47 |
| Msa0159180 | Msa0636070 | 0.809469 | 1.863040e-50 | -8.615850e-47 |
| Msa0159180 | Msa0641670 | 0.805007 | 1.643263e-49 | -8.615850e-47 |
| Msa0159180 | Msa0648080 | 0.817494 | 3.203427e-52 | -8.615850e-47 |
| Msa0159180 | Msa0649350 | 0.809296 | 2.030091e-50 | -8.615850e-47 |
| Msa0159180 | Msa0660490 | 0.812876 | 3.400265e-51 | -8.615850e-47 |
| Msa0159180 | Msa0663390 | 0.815156 | 1.067863e-51 | -8.615850e-47 |
| Msa0159180 | Msa0663920 | 0.808437 | 3.098349e-50 | -8.615850e-47 |
| Msa0159180 | Msa0673460 | 0.803605 | 3.219594e-49 | -8.615850e-47 |
| Msa0159180 | Msa0687020 | 0.814101 | 1.828259e-51 | -8.615850e-47 |
| Msa0159180 | Msa0688960 | 0.806247 | 9.025569e-50 | -8.615850e-47 |
| Msa0159180 | Msa0689260 | 0.800023 | 1.750123e-48 | -8.615850e-47 |
| Msa0159180 | Msa0691900 | 0.817253 | 3.629901e-52 | -8.615850e-47 |
| Msa0159180 | Msa0692830 | 0.858988 | 5.644412e-63 | -8.615850e-47 |
| Msa0159180 | Msa0692950 | 0.866274 | 3.214835e-65 | -8.615850e-47 |
| Msa0159180 | Msa0698540 | 0.842249 | 2.901306e-58 | -8.615850e-47 |
| Msa0159180 | Msa0709500 | 0.831121 | 1.997800e-55 | -8.615850e-47 |
| Msa0159180 | Msa0711780 | 0.800568 | 1.356068e-48 | -8.615850e-47 |
| Msa0159180 | Msa0715700 | 0.822252 | 2.617153e-53 | -8.615850e-47 |
| Msa0159180 | Msa0716840 | 0.821536 | 3.832477e-53 | -8.615850e-47 |
| Msa0159180 | Msa0722020 | 0.823294 | 1.496467e-53 | -8.615850e-47 |
| Msa0159180 | Msa0724830 | 0.821658 | 3.590680e-53 | -8.615850e-47 |
| Msa0159180 | Msa0726830 | 0.815511 | 8.907207e-52 | -8.615850e-47 |
| Msa0159180 | Msa0726860 | 0.801049 | 1.081639e-48 | -8.615850e-47 |
| Msa0159180 | Msa0737600 | 0.832889 | 7.303544e-56 | -8.615850e-47 |
| Msa0159180 | Msa0743720 | 0.828155 | 1.052156e-54 | -8.615850e-47 |
| Msa0159180 | Msa0750430 | 0.822302 | 2.548113e-53 | -8.615850e-47 |
| Msa0159180 | Msa0762970 | 0.800511 | 1.392602e-48 | -8.615850e-47 |
| Msa0159180 | Msa0763020 | 0.816337 | 5.825249e-52 | -8.615850e-47 |
| Msa0159180 | Msa0763070 | 0.819149 | 1.351383e-52 | -8.615850e-47 |
| Msa0159180 | Msa0765380 | 0.808748 | 2.659035e-50 | -8.615850e-47 |
| Msa0159180 | Msa0769920 | 0.801358 | 9.348339e-49 | -8.615850e-47 |
| Msa0159180 | Msa0771720 | 0.833829 | 4.258441e-56 | -8.615850e-47 |
| Msa0159180 | Msa0790660 | -0.828112 | 1.077436e-54 | -8.615850e-47 |
| Msa0159180 | Msa0790850 | 0.829109 | 6.187969e-55 | -8.615850e-47 |
| Msa0159180 | Msa0794670 | 0.803091 | 4.113087e-49 | -8.615850e-47 |
| Msa0159180 | Msa0806800 | 0.809819 | 1.566877e-50 | -8.615850e-47 |
| Msa0159180 | Msa0808080 | 0.827737 | 1.326354e-54 | -8.615850e-47 |
| Msa0159180 | Msa0808270 | 0.802068 | 6.684110e-49 | -8.615850e-47 |
| Msa0159180 | Msa0824680 | 0.814870 | 1.236066e-51 | -8.615850e-47 |
| Msa0159180 | Msa0832150 | 0.801480 | 8.827477e-49 | -8.615850e-47 |
| Msa0159180 | Msa0842830 | 0.819778 | 9.711759e-53 | -8.615850e-47 |
| Msa0159180 | Msa0847080 | 0.816082 | 6.643683e-52 | -8.615850e-47 |
| Msa0159180 | Msa0849030 | 0.828238 | 1.004581e-54 | -8.615850e-47 |
| Msa0159180 | Msa0850960 | 0.801973 | 6.992241e-49 | -8.615850e-47 |
| Msa0159180 | Msa0856960 | 0.803101 | 4.092655e-49 | -8.615850e-47 |
| Msa0159180 | Msa0866550 | 0.830173 | 3.408997e-55 | -8.615850e-47 |
| Msa0159180 | Msa0876200 | 0.807901 | 4.029813e-50 | -8.615850e-47 |
| Msa0159180 | Msa0877410 | 0.832297 | 1.024462e-55 | -8.615850e-47 |
| Msa0159180 | Msa0887250 | 0.808440 | 3.094699e-50 | -8.615850e-47 |
| Msa0159180 | Msa0909110 | 0.802493 | 5.465805e-49 | -8.615850e-47 |
| Msa0159180 | Msa0927260 | 0.805004 | 1.645653e-49 | -8.615850e-47 |
| Msa0159180 | Msa0930140 | 0.807807 | 4.219774e-50 | -8.615850e-47 |
| Msa0159180 | Msa0930860 | 0.802144 | 6.449351e-49 | -8.615850e-47 |
| Msa0159180 | Msa0933100 | 0.808364 | 3.210963e-50 | -8.615850e-47 |
| Msa0159180 | Msa0942070 | 0.824160 | 9.383596e-54 | -8.615850e-47 |
| Msa0159180 | Msa0945970 | 0.802489 | 5.475556e-49 | -8.615850e-47 |
| Msa0159180 | Msa0968680 | 0.806844 | 6.751621e-50 | -8.615850e-47 |
| Msa0159180 | Msa0969630 | 0.809522 | 1.815266e-50 | -8.615850e-47 |
| Msa0159180 | Msa0970030 | 0.800262 | 1.564995e-48 | -8.615850e-47 |
| Msa0159180 | Msa0971020 | 0.801415 | 9.100301e-49 | -8.615850e-47 |
| Msa0159180 | Msa0974810 | 0.804123 | 2.512788e-49 | -8.615850e-47 |
| Msa0159180 | Msa0987370 | 0.813086 | 3.057795e-51 | -8.615850e-47 |
| Msa0159180 | Msa0999970 | 0.818359 | 2.042966e-52 | -8.615850e-47 |
| Msa0159180 | Msa1009820 | 0.815801 | 7.672552e-52 | -8.615850e-47 |
| Msa0159180 | Msa1012830 | 0.831874 | 1.303477e-55 | -8.615850e-47 |
| Msa0159180 | Msa1021540 | 0.823022 | 1.732223e-53 | -8.615850e-47 |
| Msa0159180 | Msa1023180 | 0.802454 | 5.568056e-49 | -8.615850e-47 |
| Msa0159180 | Msa1023920 | 0.816622 | 5.030593e-52 | -8.615850e-47 |
| Msa0159180 | Msa1024750 | 0.813096 | 3.042971e-51 | -8.615850e-47 |
| Msa0159180 | Msa1034150 | 0.830455 | 2.908192e-55 | -8.615850e-47 |
| Msa0159180 | Msa1037420 | 0.812940 | 3.291935e-51 | -8.615850e-47 |
| Msa0159180 | Msa1043050 | 0.808921 | 2.442070e-50 | -8.615850e-47 |
| Msa0159180 | Msa1046020 | 0.814053 | 1.874253e-51 | -8.615850e-47 |
| Msa0159180 | Msa1046060 | 0.816894 | 4.371028e-52 | -8.615850e-47 |
| Msa0159180 | Msa1051200 | 0.840592 | 7.922915e-58 | -8.615850e-47 |
| Msa0159180 | Msa1058750 | 0.808407 | 3.144715e-50 | -8.615850e-47 |
| Msa0159180 | Msa1062920 | 0.831027 | 2.106057e-55 | -8.615850e-47 |
| Msa0159180 | Msa1063510 | 0.808408 | 3.143062e-50 | -8.615850e-47 |
| Msa0159180 | Msa1082500 | 0.800187 | 1.621504e-48 | -8.615850e-47 |
| Msa0159180 | Msa1091100 | 0.803180 | 3.943160e-49 | -8.615850e-47 |
| Msa0159180 | Msa1091940 | 0.819836 | 9.419764e-53 | -8.615850e-47 |
| Msa0159180 | Msa1102220 | 0.810175 | 1.313794e-50 | -8.615850e-47 |
| Msa0159180 | Msa1106700 | 0.815212 | 1.038008e-51 | -8.615850e-47 |
| Msa0159180 | Msa1107900 | 0.813714 | 2.225998e-51 | -8.615850e-47 |
| Msa0159180 | Msa1114410 | 0.814996 | 1.158875e-51 | -8.615850e-47 |
| Msa0159180 | Msa1125760 | 0.808631 | 2.816830e-50 | -8.615850e-47 |
| Msa0159180 | Msa1131220 | 0.802560 | 5.295257e-49 | -8.615850e-47 |
| Msa0159180 | Msa1137700 | 0.834191 | 3.457476e-56 | -8.615850e-47 |
| Msa0159180 | Msa1144890 | 0.810228 | 1.279249e-50 | -8.615850e-47 |
| Msa0159180 | Msa1147970 | 0.825227 | 5.257522e-54 | -8.615850e-47 |
| Msa0159180 | Msa1150710 | 0.814684 | 1.359256e-51 | -8.615850e-47 |
| Msa0159180 | Msa1160590 | 0.801448 | 8.960758e-49 | -8.615850e-47 |
| Msa0159180 | Msa1167340 | 0.803506 | 3.374860e-49 | -8.615850e-47 |
| Msa0159180 | Msa1169550 | 0.805759 | 1.143003e-49 | -8.615850e-47 |
| Msa0159180 | Msa1171360 | 0.830466 | 2.891576e-55 | -8.615850e-47 |
| Msa0159180 | Msa1173140 | 0.837019 | 6.651273e-57 | -8.615850e-47 |
| Msa0159180 | Msa1174040 | 0.848471 | 6.002422e-60 | -8.615850e-47 |
| Msa0159180 | Msa1180500 | 0.805488 | 1.303222e-49 | -8.615850e-47 |
| Msa0159180 | Msa1181250 | 0.817640 | 2.968860e-52 | -8.615850e-47 |
| Msa0159180 | Msa1181330 | 0.808085 | 3.683304e-50 | -8.615850e-47 |
| Msa0159180 | Msa1190930 | 0.846392 | 2.235347e-59 | -8.615850e-47 |
| Msa0159180 | Msa1197410 | 0.811885 | 5.596727e-51 | -8.615850e-47 |
| Msa0159180 | Msa1199220 | 0.814042 | 1.884586e-51 | -8.615850e-47 |
| Msa0159180 | Msa1199990 | 0.805840 | 1.098989e-49 | -8.615850e-47 |
| Msa0159180 | Msa1201240 | 0.844700 | 6.425711e-59 | -8.615850e-47 |
| Msa0159180 | Msa1204250 | 0.835301 | 1.816989e-56 | -8.615850e-47 |
| Msa0159180 | Msa1211890 | 0.805890 | 1.073085e-49 | -8.615850e-47 |
| Msa0159180 | Msa1217470 | 0.807365 | 5.238087e-50 | -8.615850e-47 |
| Msa0159180 | Msa1217830 | 0.814460 | 1.523823e-51 | -8.615850e-47 |
| Msa0159180 | Msa1224810 | 0.808588 | 2.876459e-50 | -8.615850e-47 |
| Msa0159180 | Msa1231840 | 0.813036 | 3.136612e-51 | -8.615850e-47 |
| Msa0159180 | Msa1237940 | 0.813324 | 2.712143e-51 | -8.615850e-47 |
| Msa0159180 | Msa1244610 | 0.817326 | 3.495040e-52 | -8.615850e-47 |
| Msa0159180 | Msa1245930 | 0.802485 | 5.485450e-49 | -8.615850e-47 |
| Msa0159180 | Msa1247250 | 0.813782 | 2.150234e-51 | -8.615850e-47 |
| Msa0159180 | Msa1250890 | 0.807984 | 3.869484e-50 | -8.615850e-47 |
| Msa0159180 | Msa1253020 | 0.836934 | 6.993000e-57 | -8.615850e-47 |
| Msa0159180 | Msa1254730 | 0.809368 | 1.958282e-50 | -8.615850e-47 |
| Msa0159180 | Msa1275360 | 0.812968 | 3.245110e-51 | -8.615850e-47 |
| Msa0159180 | Msa1276440 | 0.803128 | 4.041116e-49 | -8.615850e-47 |
| Msa0159180 | Msa1294820 | 0.825461 | 4.629488e-54 | -8.615850e-47 |
| Msa0159180 | Msa1305340 | 0.802184 | 6.329254e-49 | -8.615850e-47 |
| Msa0159180 | Msa1305660 | 0.826087 | 3.287787e-54 | -8.615850e-47 |
| Msa0159180 | Msa1312520 | 0.812556 | 3.995469e-51 | -8.615850e-47 |
| Msa0159180 | Msa1327550 | 0.807013 | 6.218836e-50 | -8.615850e-47 |
| Msa0159180 | Msa1332590 | 0.819881 | 9.200780e-53 | -8.615850e-47 |
| Msa0159180 | Msa1333110 | 0.835959 | 1.238689e-56 | -8.615850e-47 |
| Msa0159180 | Msa1348560 | 0.823240 | 1.540703e-53 | -8.615850e-47 |
| Msa0159180 | Msa1353980 | 0.803403 | 3.545424e-49 | -8.615850e-47 |
| Msa0159180 | Msa1356440 | 0.801754 | 7.756921e-49 | -8.615850e-47 |
| Msa0159180 | Msa1358250 | 0.800531 | 1.379524e-48 | -8.615850e-47 |
| Msa0159180 | Msa1361520 | 0.821571 | 3.762658e-53 | -8.615850e-47 |
| Msa0159180 | Msa1368120 | 0.829978 | 3.803838e-55 | -8.615850e-47 |
| Msa0159180 | Msa1372580 | 0.821502 | 3.901595e-53 | -8.615850e-47 |
| Msa0159180 | Msa1385770 | 0.820871 | 5.454297e-53 | -8.615850e-47 |
| Msa0159180 | Msa1386780 | 0.819330 | 1.228912e-52 | -8.615850e-47 |
| Msa0159180 | Msa1389800 | 0.805687 | 1.183398e-49 | -8.615850e-47 |
| Msa0159180 | Msa1390180 | 0.816028 | 6.829626e-52 | -8.615850e-47 |
| Msa0159180 | Msa1392780 | 0.806301 | 8.793187e-50 | -8.615850e-47 |
| Msa0159180 | Msa1394290 | 0.814573 | 1.438087e-51 | -8.615850e-47 |
| Msa0159180 | Msa1394500 | 0.824840 | 6.489159e-54 | -8.615850e-47 |
| Msa0159180 | Msa1403800 | 0.819221 | 1.301195e-52 | -8.615850e-47 |
| Msa0159180 | Msa1404010 | 0.825041 | 5.819103e-54 | -8.615850e-47 |
| Msa0159180 | Msa1409240 | 0.820211 | 7.732208e-53 | -8.615850e-47 |
| Msa0159180 | Msa1410100 | 0.819520 | 1.112678e-52 | -8.615850e-47 |
| Msa0159180 | Msa1426030 | 0.805558 | 1.259561e-49 | -8.615850e-47 |
| Msa0159180 | Msa1427230 | 0.821424 | 4.067788e-53 | -8.615850e-47 |
| Msa0159180 | Msa1433390 | 0.815551 | 8.726172e-52 | -8.615850e-47 |
| Msa0159180 | Msa1434140 | 0.820098 | 8.208675e-53 | -8.615850e-47 |
| Msa0159180 | Msa1434420 | -0.809157 | 2.174258e-50 | -8.615850e-47 |
| Msa0159180 | Msa1435370 | 0.833828 | 4.262207e-56 | -8.615850e-47 |
| Msa0159180 | Msa1440000 | 0.824528 | 7.686801e-54 | -8.615850e-47 |
| Msa0159180 | Msa1440910 | 0.827752 | 1.314829e-54 | -8.615850e-47 |
| Msa0159180 | Msa1443850 | 0.814460 | 1.523823e-51 | -8.615850e-47 |
| Msa0159180 | Msa1444740 | 0.805483 | 1.306397e-49 | -8.615850e-47 |
| Msa0159180 | Msa1451550 | 0.800880 | 1.170900e-48 | -8.615850e-47 |
| Msa0159180 | Msa1453080 | 0.816433 | 5.545560e-52 | -8.615850e-47 |
| Msa0159180 | Msa1454480 | 0.845341 | 4.314218e-59 | -8.615850e-47 |
| Msa0159180 | Msa1460830 | 0.831035 | 2.096675e-55 | -8.615850e-47 |
| Msa0159180 | Msa1461280 | 0.826920 | 2.081741e-54 | -8.615850e-47 |
| Msa0159180 | Msa1466540 | 0.809055 | 2.286481e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159180 | MtrunA17_Chr1g0171521 | 94.340 | 265 | 14 | 1 | 1 | 265 | 1 | 264 | 3.43e-175 | 491 |
| Msa0159180 | MtrunA17_Chr1g0171511 | 99.065 | 107 | 1 | 0 | 338 | 444 | 1 | 107 | 5.56e-70 | 217 |
| Msa0159180 | MtrunA17_Chr4g0067911 | 49.474 | 190 | 92 | 3 | 103 | 291 | 144 | 330 | 8.95e-50 | 172 |
| Msa0159180 | MtrunA17_Chr4g0033621 | 52.601 | 173 | 80 | 1 | 120 | 292 | 134 | 304 | 3.49e-48 | 170 |
| Msa0159180 | MtrunA17_Chr6g0449261 | 40.075 | 267 | 148 | 5 | 103 | 366 | 96 | 353 | 1.21e-38 | 147 |
| Msa0159180 | MtrunA17_Chr8g0391361 | 49.324 | 148 | 71 | 3 | 120 | 266 | 7 | 151 | 2.46e-36 | 131 |
| Msa0159180 | MtrunA17_Chr1g0187011 | 35.789 | 190 | 116 | 3 | 126 | 311 | 596 | 783 | 6.30e-28 | 117 |
| Msa0159180 | MtrunA17_Chr4g0071101 | 39.865 | 148 | 82 | 3 | 155 | 298 | 586 | 730 | 3.31e-25 | 108 |
| Msa0159180 | MtrunA17_Chr6g0451621 | 31.739 | 230 | 145 | 5 | 104 | 328 | 507 | 729 | 1.47e-24 | 107 |
| Msa0159180 | MtrunA17_Chr6g0484411 | 36.111 | 180 | 109 | 3 | 122 | 297 | 583 | 760 | 4.00e-20 | 93.6 |
| Msa0159180 | MtrunA17_Chr2g0330811 | 38.194 | 144 | 81 | 4 | 132 | 270 | 569 | 709 | 3.52e-16 | 81.3 |
| Msa0159180 | MtrunA17_Chr8g0391141 | 31.737 | 167 | 103 | 3 | 107 | 270 | 437 | 595 | 3.35e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159180 | AT3G25440.1 | 54.725 | 455 | 157 | 11 | 18 | 444 | 11 | 444 | 2.40e-145 | 422 |
| Msa0159180 | AT3G25440.2 | 59.847 | 391 | 130 | 8 | 60 | 444 | 11 | 380 | 2.76e-143 | 414 |
| Msa0159180 | AT3G25440.4 | 58.900 | 309 | 103 | 6 | 139 | 444 | 2 | 289 | 1.74e-115 | 340 |
| Msa0159180 | AT3G25440.3 | 58.900 | 309 | 103 | 6 | 139 | 444 | 2 | 289 | 1.74e-115 | 340 |
| Msa0159180 | AT3G25440.5 | 58.900 | 309 | 103 | 6 | 139 | 444 | 2 | 289 | 1.74e-115 | 340 |
| Msa0159180 | AT2G28480.1 | 49.727 | 183 | 88 | 2 | 110 | 292 | 117 | 295 | 6.49e-48 | 169 |
| Msa0159180 | AT4G13070.1 | 45.498 | 211 | 106 | 3 | 80 | 283 | 97 | 305 | 9.58e-48 | 167 |
| Msa0159180 | AT3G27550.2 | 47.701 | 174 | 89 | 1 | 117 | 290 | 106 | 277 | 1.87e-37 | 144 |
| Msa0159180 | AT3G27550.3 | 47.701 | 174 | 89 | 1 | 117 | 290 | 50 | 221 | 2.68e-37 | 142 |
| Msa0159180 | AT3G27550.1 | 47.701 | 174 | 89 | 1 | 117 | 290 | 50 | 221 | 2.68e-37 | 142 |
| Msa0159180 | AT3G23070.1 | 36.313 | 179 | 97 | 6 | 126 | 298 | 611 | 778 | 1.25e-24 | 107 |
| Msa0159180 | AT3G18390.1 | 36.316 | 190 | 115 | 3 | 122 | 307 | 615 | 802 | 1.80e-24 | 107 |
| Msa0159180 | AT4G29750.1 | 34.715 | 193 | 118 | 3 | 120 | 309 | 611 | 798 | 2.19e-24 | 107 |
| Msa0159180 | AT4G29750.2 | 34.715 | 193 | 118 | 3 | 120 | 309 | 611 | 798 | 2.36e-24 | 106 |
| Msa0159180 | AT4G14510.1 | 35.227 | 176 | 103 | 3 | 126 | 298 | 638 | 805 | 3.27e-24 | 106 |
| Msa0159180 | AT3G01370.1 | 31.068 | 206 | 133 | 4 | 112 | 310 | 528 | 731 | 1.93e-21 | 98.2 |
| Msa0159180 | AT5G16180.1 | 31.210 | 157 | 104 | 2 | 150 | 303 | 563 | 718 | 2.37e-15 | 79.0 |
Find 97 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCACTTTGTCACTTATT+TGG | 0.094749 | 1_4:+29168674 | None:intergenic |
| GGAGGAGAAACCTCTTTATT+TGG | 0.187927 | 1_4:-29168473 | Msa0159180:CDS |
| AATGGTTTATCTTCAATAAA+TGG | 0.201704 | 1_4:+29168170 | None:intergenic |
| TCATGATTATACTTCGAAAA+TGG | 0.229572 | 1_4:+29171341 | None:intergenic |
| GGTTCAATTGATGGCGTTCC+TGG | 0.254372 | 1_4:+29171411 | None:intergenic |
| AAACGAAGTACCTTCTTTCT+TGG | 0.258185 | 1_4:+29169590 | None:intergenic |
| TTCGAGCTCTTGCTCGAGTT+TGG | 0.272822 | 1_4:+29168756 | None:intergenic |
| CTGGTCAACTTCATCAAACT+TGG | 0.324429 | 1_4:+29168339 | None:intergenic |
| CATTGGATAAATCAAAATAT+AGG | 0.327693 | 1_4:-29168810 | Msa0159180:CDS |
| AGATTCAGATACAGAGGATT+TGG | 0.340696 | 1_4:-29168500 | Msa0159180:CDS |
| GGCACATATGGACTCTGATT+TGG | 0.341724 | 1_4:-29168560 | Msa0159180:CDS |
| TCGAGCTCTTGCTCGAGTTT+GGG | 0.352265 | 1_4:+29168757 | None:intergenic |
| CTTTATCTAGTTTCTCTAGT+TGG | 0.373283 | 1_4:+29168626 | None:intergenic |
| AGAAGAAGAAAGAGTTTCAA+AGG | 0.389725 | 1_4:-29171208 | Msa0159180:CDS |
| ATTGGATAAATCAAAATATA+GGG | 0.392763 | 1_4:-29168809 | Msa0159180:CDS |
| CTCGGAGGATGAGGCACATA+TGG | 0.401335 | 1_4:-29168572 | Msa0159180:CDS |
| CTATCAACTACGGATGTGTT+TGG | 0.402757 | 1_4:-29168109 | Msa0159180:three_prime_UTR |
| TAAGAAAGTGGTAGAGGAGT+AGG | 0.416350 | 1_4:+29171626 | None:intergenic |
| ATGCAGCACGTAGGAAAATC+TGG | 0.421146 | 1_4:+29168320 | None:intergenic |
| AACGAAGTACCTTCTTTCTT+GGG | 0.425508 | 1_4:+29169591 | None:intergenic |
| ATAGCAGATAGTATATTTGA+AGG | 0.431812 | 1_4:-29168209 | Msa0159180:three_prime_UTR |
| ACTGAGCTGGCAAGATTGAC+TGG | 0.443729 | 1_4:-29169716 | Msa0159180:CDS |
| TAAATTCCTCTTCTTCCAAC+TGG | 0.446845 | 1_4:+29169839 | None:intergenic |
| TTAAATTCGTCCAAATAAAG+AGG | 0.451757 | 1_4:+29168463 | None:intergenic |
| ACATCACCATCAGAATCCTT+AGG | 0.451775 | 1_4:+29171302 | None:intergenic |
| TTCGAAGTATAATCATGATA+AGG | 0.457159 | 1_4:-29171336 | Msa0159180:CDS |
| TAGAAGGAAGGTTCAATTGA+TGG | 0.466408 | 1_4:+29171402 | None:intergenic |
| CCTACTCGTGTAGAAGTAGA+AGG | 0.468381 | 1_4:+29171386 | None:intergenic |
| GTCACGACCCACGGCGGTGG+AGG | 0.481911 | 1_4:+29171712 | None:intergenic |
| CTCGTCACGACCCACGGCGG+TGG | 0.484612 | 1_4:+29171709 | None:intergenic |
| TGGAGATTTGAAACACTACT+TGG | 0.485963 | 1_4:+29168646 | None:intergenic |
| GTTGATAGTACTTGTCAGAA+AGG | 0.489926 | 1_4:+29168124 | None:intergenic |
| AACGACGAGGAGAAAATTGA+AGG | 0.494552 | 1_4:-29171273 | Msa0159180:CDS |
| CAACGGTTGCTCGGAGGATG+AGG | 0.494561 | 1_4:-29168581 | Msa0159180:CDS |
| TTGATAGTACTTGTCAGAAA+GGG | 0.496180 | 1_4:+29168125 | None:intergenic |
| ATTGTTTCTGATGATTCTGT+AGG | 0.503591 | 1_4:+29169938 | None:intergenic |
| TCTAAAATTACATTAGCTCA+TGG | 0.511955 | 1_4:+29168075 | None:intergenic |
| ACTACGGATGTGTTTGGATG+AGG | 0.512958 | 1_4:-29168103 | Msa0159180:three_prime_UTR |
| GCGTCAATATCTCAGGATCA+TGG | 0.513687 | 1_4:+29169915 | None:intergenic |
| TAAGGAGATTGCCACTGAGC+TGG | 0.515928 | 1_4:-29169729 | Msa0159180:CDS |
| TCTTCTGGCGTCAATATCTC+AGG | 0.519559 | 1_4:+29169908 | None:intergenic |
| AGATAGTATATTTGAAGGAG+AGG | 0.524977 | 1_4:-29168204 | Msa0159180:three_prime_UTR |
| CTTGAACTATGTTATATGCA+AGG | 0.525833 | 1_4:-29171441 | Msa0159180:CDS |
| AGATACAGAGGATTTGGTAA+AGG | 0.527087 | 1_4:-29168494 | Msa0159180:CDS |
| CTAGAGAAACTAGATAAAGT+TGG | 0.528664 | 1_4:-29168622 | Msa0159180:CDS |
| GCGAAGTAAGAAAGTGGTAG+AGG | 0.531779 | 1_4:+29171620 | None:intergenic |
| TAATGATAACAACGGTTGCT+CGG | 0.533853 | 1_4:-29168590 | Msa0159180:CDS |
| GTTCAATTGATGGCGTTCCT+GGG | 0.539200 | 1_4:+29171412 | None:intergenic |
| CTCTCTCTCGTCACGACCCA+CGG | 0.539954 | 1_4:+29171703 | None:intergenic |
| TACAGAGGATTTGGTAAAGG+AGG | 0.540667 | 1_4:-29168491 | Msa0159180:CDS |
| GTATCCCCATCACTTTGCTC+CGG | 0.541643 | 1_4:+29168433 | None:intergenic |
| TATGTGCCAGTTGGAAGAAG+AGG | 0.545414 | 1_4:-29169845 | Msa0159180:CDS |
| CGTGGAGACATTATCTCTGT+TGG | 0.551066 | 1_4:+29169623 | None:intergenic |
| CTACGGATGTGTTTGGATGA+GGG | 0.551905 | 1_4:-29168102 | Msa0159180:three_prime_UTR |
| TTGACTGGAGGTATAGTGCT+TGG | 0.552204 | 1_4:-29169701 | Msa0159180:CDS |
| TATATGCAAGGTTTATGCCC+AGG | 0.555086 | 1_4:-29171429 | Msa0159180:CDS |
| GTATCTGCCTCCACCGCCGT+GGG | 0.559416 | 1_4:-29171719 | Msa0159180:five_prime_UTR |
| ATGGAGTTGAATGAAAACTT+AGG | 0.559747 | 1_4:+29171360 | None:intergenic |
| GGAGACATTATCTCTGTTGG+TGG | 0.560050 | 1_4:+29169626 | None:intergenic |
| CCTTCTACTTCTACACGAGT+AGG | 0.569886 | 1_4:-29171386 | Msa0159180:CDS |
| AAGTGAAATTTATTGACAAG+CGG | 0.580154 | 1_4:+29171654 | None:intergenic |
| TGGTCAACTTCATCAAACTT+GGG | 0.584058 | 1_4:+29168340 | None:intergenic |
| AGTATCTGCCTCCACCGCCG+TGG | 0.586470 | 1_4:-29171720 | Msa0159180:five_prime_UTR |
| TAAGGTCGTAGAACAACCTA+AGG | 0.588611 | 1_4:-29171318 | Msa0159180:CDS |
| TCTTACTTCGCCGCAAAACA+AGG | 0.589761 | 1_4:-29171608 | Msa0159180:intron |
| GCATGTTCAAAATTACACCT+TGG | 0.591409 | 1_4:+29169816 | None:intergenic |
| AGTCACTCTCCCAAGAAAGA+AGG | 0.593405 | 1_4:-29169600 | Msa0159180:intron |
| GATAAATCAAAATATAGGGA+TGG | 0.594284 | 1_4:-29168805 | Msa0159180:CDS |
| ACGACGAGGAGAAAATTGAA+GGG | 0.594388 | 1_4:-29171272 | Msa0159180:CDS |
| TGAGACAGATTCAGATACAG+AGG | 0.595778 | 1_4:-29168506 | Msa0159180:CDS |
| TGATAGTACTTGTCAGAAAG+GGG | 0.600938 | 1_4:+29168126 | None:intergenic |
| ACACAATAATAATGTACAGA+GGG | 0.600941 | 1_4:-29169664 | Msa0159180:CDS |
| GTCGTGACGAGAGAGAGAAA+TGG | 0.606791 | 1_4:-29171697 | Msa0159180:exon |
| CTGACAAGTACTATCAACTA+CGG | 0.612249 | 1_4:-29168119 | Msa0159180:three_prime_UTR |
| GACGAGAGAGAGAAATGGCG+TGG | 0.612355 | 1_4:-29171692 | Msa0159180:exon |
| CTCGTGTAGAAGTAGAAGGA+AGG | 0.614601 | 1_4:+29171390 | None:intergenic |
| ACATCAAACTTTGCAAGTGG+TGG | 0.616673 | 1_4:-29169777 | Msa0159180:CDS |
| GAACAACCTAAGGATTCTGA+TGG | 0.619651 | 1_4:-29171308 | Msa0159180:CDS |
| AGTGCTTGGCATTCATGAAG+AGG | 0.621574 | 1_4:-29169687 | Msa0159180:CDS |
| GAAACATCAAACTTTGCAAG+TGG | 0.622225 | 1_4:-29169780 | Msa0159180:CDS |
| TTTCTTGGGAGAGTGACTCG+TGG | 0.625433 | 1_4:+29169605 | None:intergenic |
| AGTAACACAGAAGCAGCTGA+AGG | 0.637950 | 1_4:-29168700 | Msa0159180:CDS |
| TTTGCGGCGAAGTAAGAAAG+TGG | 0.644628 | 1_4:+29171614 | None:intergenic |
| GGGATGGCCTCCGCGCTGTG+AGG | 0.644794 | 1_4:-29168789 | Msa0159180:CDS |
| GGAAGAAGAGGAATTTACCA+AGG | 0.659024 | 1_4:-29169833 | Msa0159180:CDS |
| GATAGTACTTGTCAGAAAGG+GGG | 0.664901 | 1_4:+29168127 | None:intergenic |
| GACACAATAATAATGTACAG+AGG | 0.674037 | 1_4:-29169665 | Msa0159180:CDS |
| GAGAGAGAGAAATGGCGTGG+AGG | 0.674140 | 1_4:-29171689 | Msa0159180:exon |
| AGTCAATCTTGCCAGCTCAG+TGG | 0.683540 | 1_4:+29169718 | None:intergenic |
| TGATAACAACGGTTGCTCGG+AGG | 0.692533 | 1_4:-29168587 | Msa0159180:CDS |
| GTTTCAAAGGATGACAACAG+AGG | 0.702630 | 1_4:-29171195 | Msa0159180:CDS |
| TATATCTCCTCACAGCGCGG+AGG | 0.707405 | 1_4:+29168782 | None:intergenic |
| GAGCTGGCAAGATTGACTGG+AGG | 0.723328 | 1_4:-29169713 | Msa0159180:CDS |
| GAATATATCTCCTCACAGCG+CGG | 0.729557 | 1_4:+29168779 | None:intergenic |
| GTGATGTCAAAGTAACGACG+AGG | 0.751106 | 1_4:-29171286 | Msa0159180:CDS |
| GCAATGTTTAATGATAACAA+CGG | 0.770118 | 1_4:-29168598 | Msa0159180:CDS |
| TCTCTCGTCACGACCCACGG+CGG | 0.779803 | 1_4:+29171706 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATAATAATCATTTC+AGG | - | chr1_4:29168238-29168257 | Msa0159180:three_prime_UTR | 10.0% |
| !!! | AATTTTATACAAGTTATTAA+AGG | - | chr1_4:29168575-29168594 | Msa0159180:CDS | 10.0% |
| !!! | AATATGAAATCTTTAAAATA+AGG | + | chr1_4:29168706-29168725 | None:intergenic | 10.0% |
| !!! | TACTTTTTGTTTTTAAATTA+CGG | + | chr1_4:29168783-29168802 | None:intergenic | 10.0% |
| !!! | ATTGTAATTTTATAACTTTT+AGG | + | chr1_4:29169382-29169401 | None:intergenic | 10.0% |
| !!! | ATTTCATATTTTTACTCTTA+GGG | - | chr1_4:29168716-29168735 | Msa0159180:CDS | 15.0% |
| !! | TATAAGTATCTAATCTTAAA+TGG | - | chr1_4:29169351-29169370 | Msa0159180:intron | 15.0% |
| !!! | TTTTTATTTTTCCAAAAGAA+GGG | + | chr1_4:29170590-29170609 | None:intergenic | 15.0% |
| !!! | ATTTTTATTTTTCCAAAAGA+AGG | + | chr1_4:29170591-29170610 | None:intergenic | 15.0% |
| !!! | CTTTTGGAAAAATAAAAATT+TGG | - | chr1_4:29170592-29170611 | Msa0159180:intron | 15.0% |
| !! | ATTGGATAAATCAAAATATA+GGG | - | chr1_4:29170934-29170953 | Msa0159180:intron | 15.0% |
| !!! | TTTTTCTTTTTCTTTTTTGT+TGG | - | chr1_4:29171500-29171519 | Msa0159180:intron | 15.0% |
| !!! | TTTTCTTTTTCTTTTTTGTT+GGG | - | chr1_4:29171501-29171520 | Msa0159180:intron | 15.0% |
| !!! | TTTTTTTTTAGAATTCTTTG+AGG | - | chr1_4:29171734-29171753 | Msa0159180:five_prime_UTR | 15.0% |
| !!! | TTAAAATAAGGTGTTAAAGT+AGG | + | chr1_4:29168694-29168713 | None:intergenic | 20.0% |
| !!! | GATTTCATATTTTTACTCTT+AGG | - | chr1_4:29168715-29168734 | Msa0159180:CDS | 20.0% |
| !!! | GAATTATTTCTTTCTAATGT+AGG | - | chr1_4:29169735-29169754 | Msa0159180:CDS | 20.0% |
| !!! | ACACTTTTTCTTCTTAAAAA+TGG | - | chr1_4:29169858-29169877 | Msa0159180:CDS | 20.0% |
| !!! | CACTTTTTCTTCTTAAAAAT+GGG | - | chr1_4:29169859-29169878 | Msa0159180:CDS | 20.0% |
| !! | TGTGAATAAAAAAACAGATT+TGG | - | chr1_4:29170199-29170218 | Msa0159180:intron | 20.0% |
| !! | AAATTTCTTCATACTATTCT+AGG | - | chr1_4:29170245-29170264 | Msa0159180:intron | 20.0% |
| !! | AGTATGAAAAAGTTCAAAAT+TGG | + | chr1_4:29170853-29170872 | None:intergenic | 20.0% |
| !! | CATTGGATAAATCAAAATAT+AGG | - | chr1_4:29170933-29170952 | Msa0159180:intron | 20.0% |
| !! | AATGGTTTATCTTCAATAAA+TGG | + | chr1_4:29171576-29171595 | None:intergenic | 20.0% |
| ! | AAGTGAAATTTATTGACAAG+CGG | + | chr1_4:29168092-29168111 | None:intergenic | 25.0% |
| !!! | GAAATAAATACCTTGTTTTG+CGG | + | chr1_4:29168148-29168167 | None:intergenic | 25.0% |
| ! | TCATGATTATACTTCGAAAA+TGG | + | chr1_4:29168405-29168424 | None:intergenic | 25.0% |
| ! | TTCGAAGTATAATCATGATA+AGG | - | chr1_4:29168407-29168426 | Msa0159180:CDS | 25.0% |
| ! | CAACTTTATCAATAGACTAA+GGG | + | chr1_4:29168979-29168998 | None:intergenic | 25.0% |
| ! | ACAACTTTATCAATAGACTA+AGG | + | chr1_4:29168980-29168999 | None:intergenic | 25.0% |
| ! | AACAATGGTTAATGTTATCT+TGG | - | chr1_4:29169172-29169191 | Msa0159180:intron | 25.0% |
| !! | ATTTTTACTGTCCTTTTTGA+AGG | - | chr1_4:29169238-29169257 | Msa0159180:intron | 25.0% |
| ! | AACTTGTAGATAGAAATTCT+AGG | + | chr1_4:29169269-29169288 | None:intergenic | 25.0% |
| ! | AGATTAGATACTTATATCAG+AGG | + | chr1_4:29169347-29169366 | None:intergenic | 25.0% |
| ! | AGTATCTAATCTTAAATGGA+AGG | - | chr1_4:29169355-29169374 | Msa0159180:intron | 25.0% |
| ! | TTATAACAGAAATATCAAGC+AGG | + | chr1_4:29169496-29169515 | None:intergenic | 25.0% |
| !! | TGACAGCTTTGATTTAATAA+TGG | + | chr1_4:29169539-29169558 | None:intergenic | 25.0% |
| ! | GAGATAAAAACCAAAAATGA+TGG | + | chr1_4:29169593-29169612 | None:intergenic | 25.0% |
| ! | ACACAATAATAATGTACAGA+GGG | - | chr1_4:29170079-29170098 | Msa0159180:intron | 25.0% |
| ! | TGTTATTGACAGAATATCAA+TGG | + | chr1_4:29170365-29170384 | None:intergenic | 25.0% |
| ! | TTTATCAGCTTAAATGACAA+TGG | + | chr1_4:29170399-29170418 | None:intergenic | 25.0% |
| ! | TCGAAAAATAGTGATGTATT+TGG | - | chr1_4:29170467-29170486 | Msa0159180:intron | 25.0% |
| ! | AAACACGATACAATTAGAAA+TGG | + | chr1_4:29170619-29170638 | None:intergenic | 25.0% |
| ! | ATATACCATATATAGATCCA+AGG | + | chr1_4:29170765-29170784 | None:intergenic | 25.0% |
| ! | GATAAATCAAAATATAGGGA+TGG | - | chr1_4:29170938-29170957 | Msa0159180:intron | 25.0% |
| ! | GCAATGTTTAATGATAACAA+CGG | - | chr1_4:29171145-29171164 | Msa0159180:intron | 25.0% |
| ! | TTAAATTCGTCCAAATAAAG+AGG | + | chr1_4:29171283-29171302 | None:intergenic | 25.0% |
| !! | GGACGAATTTAATAATTTTC+CGG | - | chr1_4:29171291-29171310 | Msa0159180:CDS | 25.0% |
| !! | ATCATACAACTCTAAAAACA+TGG | - | chr1_4:29171363-29171382 | Msa0159180:CDS | 25.0% |
| !!! | TTTTTCTTTTTTGTTGGGAA+GGG | - | chr1_4:29171506-29171525 | Msa0159180:intron | 25.0% |
| ! | ATAGCAGATAGTATATTTGA+AGG | - | chr1_4:29171534-29171553 | Msa0159180:intron | 25.0% |
| !!! | AAAAGAGTTGATGGTTTTAA+TGG | + | chr1_4:29171594-29171613 | None:intergenic | 25.0% |
| !! | TCTAAAATTACATTAGCTCA+TGG | + | chr1_4:29171671-29171690 | None:intergenic | 25.0% |
| !! | ATGAGCTAATGTAATTTTAG+AGG | - | chr1_4:29171670-29171689 | Msa0159180:CDS | 25.0% |
| !! | TGAGCTAATGTAATTTTAGA+GGG | - | chr1_4:29171671-29171690 | Msa0159180:CDS | 25.0% |
| CTTGAACTATGTTATATGCA+AGG | - | chr1_4:29168302-29168321 | Msa0159180:CDS | 30.0% | |
| ATGGAGTTGAATGAAAACTT+AGG | + | chr1_4:29168386-29168405 | None:intergenic | 30.0% | |
| AGAAGAAGAAAGAGTTTCAA+AGG | - | chr1_4:29168535-29168554 | Msa0159180:CDS | 30.0% | |
| ! | ATTAAAGGTACACTCTCTTT+AGG | - | chr1_4:29168590-29168609 | Msa0159180:CDS | 30.0% |
| TTTAGTGCAACTGATATTCT+TGG | - | chr1_4:29169124-29169143 | Msa0159180:intron | 30.0% | |
| ! | TATCTTGGTTTCTTTTGTCT+TGG | - | chr1_4:29169187-29169206 | Msa0159180:intron | 30.0% |
| !!! | TTTTGAAGTTTGTGTAGATC+AGG | - | chr1_4:29169404-29169423 | Msa0159180:intron | 30.0% |
| ! | AGCTTTGATTTAATAATGGC+AGG | + | chr1_4:29169535-29169554 | None:intergenic | 30.0% |
| !! | AAACCAAAAATGATGGATCT+TGG | + | chr1_4:29169586-29169605 | None:intergenic | 30.0% |
| ATTTCTTTCTAATGTAGGCT+CGG | - | chr1_4:29169740-29169759 | Msa0159180:CDS | 30.0% | |
| !! | ATTGTTTCTGATGATTCTGT+AGG | + | chr1_4:29169808-29169827 | None:intergenic | 30.0% |
| !! | AAGAAGAAAAAGTGTTCTTC+TGG | + | chr1_4:29169853-29169872 | None:intergenic | 30.0% |
| !! | GCACATAATTTTTGCTTTTC+AGG | + | chr1_4:29169885-29169904 | None:intergenic | 30.0% |
| ! | TTTTGAACATGCATCTACAT+TGG | - | chr1_4:29169938-29169957 | Msa0159180:CDS | 30.0% |
| GACACAATAATAATGTACAG+AGG | - | chr1_4:29170078-29170097 | Msa0159180:intron | 30.0% | |
| !!! | AAATTTTGAAACACCAACTC+AGG | + | chr1_4:29170231-29170250 | None:intergenic | 30.0% |
| TTTCCCAAAATGCTAATCTT+GGG | + | chr1_4:29170280-29170299 | None:intergenic | 30.0% | |
| ! | TTTTCCCAAAATGCTAATCT+TGG | + | chr1_4:29170281-29170300 | None:intergenic | 30.0% |
| !! | GATTAGCATTTTGGGAAAAT+TGG | - | chr1_4:29170282-29170301 | Msa0159180:intron | 30.0% |
| TAAAAGGAAGAAGATGCAAA+GGG | + | chr1_4:29170567-29170586 | None:intergenic | 30.0% | |
| ! | TTTTCCAAAAGAAGGGTAAA+AGG | + | chr1_4:29170583-29170602 | None:intergenic | 30.0% |
| ! | TGAAGCAATCTTTTATTGTG+TGG | + | chr1_4:29170667-29170686 | None:intergenic | 30.0% |
| CTATAATTAACACATTGCAG+AGG | + | chr1_4:29170729-29170748 | None:intergenic | 30.0% | |
| ATAGCATTTATTTGCAACCT+TGG | - | chr1_4:29170745-29170764 | Msa0159180:intron | 30.0% | |
| AATAAAATGAGAGTAACCCA+AGG | + | chr1_4:29170909-29170928 | None:intergenic | 30.0% | |
| ! | CTTTATCTAGTTTCTCTAGT+TGG | + | chr1_4:29171120-29171139 | None:intergenic | 30.0% |
| CTAGAGAAACTAGATAAAGT+TGG | - | chr1_4:29171121-29171140 | Msa0159180:intron | 30.0% | |
| !! | CTTTTTCTTTTTTGTTGGGA+AGG | - | chr1_4:29171505-29171524 | Msa0159180:intron | 30.0% |
| !! | TTTTCTTTTTTGTTGGGAAG+GGG | - | chr1_4:29171507-29171526 | Msa0159180:intron | 30.0% |
| AGATAGTATATTTGAAGGAG+AGG | - | chr1_4:29171539-29171558 | Msa0159180:intron | 30.0% | |
| ! | TTGATAGTACTTGTCAGAAA+GGG | + | chr1_4:29171621-29171640 | None:intergenic | 30.0% |
| TAGAAGGAAGGTTCAATTGA+TGG | + | chr1_4:29168344-29168363 | None:intergenic | 35.0% | |
| ! | TTTTACTCTTAGGGTGTGTT+TGG | - | chr1_4:29168725-29168744 | Msa0159180:CDS | 35.0% |
| !! | TTTACACAAAGGCTGTTTCT+AGG | + | chr1_4:29169033-29169052 | None:intergenic | 35.0% |
| ACAGCCTTTGTGTAAAAATC+AGG | - | chr1_4:29169037-29169056 | Msa0159180:intron | 35.0% | |
| CAGCCTTTGTGTAAAAATCA+GGG | - | chr1_4:29169038-29169057 | Msa0159180:intron | 35.0% | |
| ! | TTGCCCTGATTTTTACACAA+AGG | + | chr1_4:29169044-29169063 | None:intergenic | 35.0% |
| TTGCATACGATACACCAAAA+TGG | - | chr1_4:29169066-29169085 | Msa0159180:intron | 35.0% | |
| ! | GTCTATACGAGTACTTGTTA+TGG | + | chr1_4:29169470-29169489 | None:intergenic | 35.0% |
| AACAGAAATATCAAGCAGGA+AGG | + | chr1_4:29169492-29169511 | None:intergenic | 35.0% | |
| ! | ACACCAAGATCCATCATTTT+TGG | - | chr1_4:29169580-29169599 | Msa0159180:intron | 35.0% |
| AGCAAAAATTATGTGCCAGT+TGG | - | chr1_4:29169889-29169908 | Msa0159180:CDS | 35.0% | |
| TAAATTCCTCTTCTTCCAAC+TGG | + | chr1_4:29169907-29169926 | None:intergenic | 35.0% | |
| GCATGTTCAAAATTACACCT+TGG | + | chr1_4:29169930-29169949 | None:intergenic | 35.0% | |
| GAAACATCAAACTTTGCAAG+TGG | - | chr1_4:29169963-29169982 | Msa0159180:CDS | 35.0% | |
| ! | AACGAAGTACCTTCTTTCTT+GGG | + | chr1_4:29170155-29170174 | None:intergenic | 35.0% |
| ! | AAACGAAGTACCTTCTTTCT+TGG | + | chr1_4:29170156-29170175 | None:intergenic | 35.0% |
| !! | AAGAAAGAAGGTACTTCGTT+TGG | - | chr1_4:29170155-29170174 | Msa0159180:intron | 35.0% |
| ! | ATTCCCCAAGATTAGCATTT+TGG | - | chr1_4:29170273-29170292 | Msa0159180:intron | 35.0% |
| ! | TTCCCCAAGATTAGCATTTT+GGG | - | chr1_4:29170274-29170293 | Msa0159180:intron | 35.0% |
| TTCCCAAAATGCTAATCTTG+GGG | + | chr1_4:29170279-29170298 | None:intergenic | 35.0% | |
| TTAGATACAACTCTCACAGT+CGG | - | chr1_4:29170422-29170441 | Msa0159180:intron | 35.0% | |
| GTAAAAGGAAGAAGATGCAA+AGG | + | chr1_4:29170568-29170587 | None:intergenic | 35.0% | |
| ! | TCTTCCTTTTACCCTTCTTT+TGG | - | chr1_4:29170576-29170595 | Msa0159180:intron | 35.0% |
| ! | AGCAATCTTTTATTGTGTGG+AGG | + | chr1_4:29170664-29170683 | None:intergenic | 35.0% |
| ATTAACACATTGCAGAGGTT+AGG | + | chr1_4:29170724-29170743 | None:intergenic | 35.0% | |
| TGCAACCTTGGATCTATATA+TGG | - | chr1_4:29170757-29170776 | Msa0159180:intron | 35.0% | |
| ! | GGGTTACTCTCATTTTATTC+AGG | - | chr1_4:29170910-29170929 | Msa0159180:intron | 35.0% |
| ! | CTCTCATTTTATTCAGGCAT+TGG | - | chr1_4:29170916-29170935 | Msa0159180:intron | 35.0% |
| ! | CACTCACTTTGTCACTTATT+TGG | + | chr1_4:29171072-29171091 | None:intergenic | 35.0% |
| ! | TGGAGATTTGAAACACTACT+TGG | + | chr1_4:29171100-29171119 | None:intergenic | 35.0% |
| TAATGATAACAACGGTTGCT+CGG | - | chr1_4:29171153-29171172 | Msa0159180:intron | 35.0% | |
| AGATTCAGATACAGAGGATT+TGG | - | chr1_4:29171243-29171262 | Msa0159180:CDS | 35.0% | |
| ! | AGATACAGAGGATTTGGTAA+AGG | - | chr1_4:29171249-29171268 | Msa0159180:CDS | 35.0% |
| TGGTCAACTTCATCAAACTT+GGG | + | chr1_4:29171406-29171425 | None:intergenic | 35.0% | |
| TTAAAAATGATGCAGCACGT+AGG | + | chr1_4:29171435-29171454 | None:intergenic | 35.0% | |
| TGATAGTACTTGTCAGAAAG+GGG | + | chr1_4:29171620-29171639 | None:intergenic | 35.0% | |
| !! | GTTGATAGTACTTGTCAGAA+AGG | + | chr1_4:29171622-29171641 | None:intergenic | 35.0% |
| CTGACAAGTACTATCAACTA+CGG | - | chr1_4:29171624-29171643 | Msa0159180:CDS | 35.0% | |
| TAAGAAAGTGGTAGAGGAGT+AGG | + | chr1_4:29168120-29168139 | None:intergenic | 40.0% | |
| TATATGCAAGGTTTATGCCC+AGG | - | chr1_4:29168314-29168333 | Msa0159180:CDS | 40.0% | |
| TAAGGTCGTAGAACAACCTA+AGG | - | chr1_4:29168425-29168444 | Msa0159180:CDS | 40.0% | |
| GAACAACCTAAGGATTCTGA+TGG | - | chr1_4:29168435-29168454 | Msa0159180:CDS | 40.0% | |
| ACATCACCATCAGAATCCTT+AGG | + | chr1_4:29168444-29168463 | None:intergenic | 40.0% | |
| AACGACGAGGAGAAAATTGA+AGG | - | chr1_4:29168470-29168489 | Msa0159180:CDS | 40.0% | |
| ACGACGAGGAGAAAATTGAA+GGG | - | chr1_4:29168471-29168490 | Msa0159180:CDS | 40.0% | |
| AGGGAAAAAGAGCTGTTGTA+AGG | - | chr1_4:29168490-29168509 | Msa0159180:CDS | 40.0% | |
| GAAAAAGAGCTGTTGTAAGG+TGG | - | chr1_4:29168493-29168512 | Msa0159180:CDS | 40.0% | |
| GTTTCAAAGGATGACAACAG+AGG | - | chr1_4:29168548-29168567 | Msa0159180:CDS | 40.0% | |
| AAATGCTAGTGTCTCAGTGT+GGG | - | chr1_4:29168613-29168632 | Msa0159180:CDS | 40.0% | |
| ! | GCAAGTGTCTGAAACTAGAA+AGG | + | chr1_4:29168670-29168689 | None:intergenic | 40.0% |
| TTAGGGTGTGTTTGGATTGA+GGG | - | chr1_4:29168733-29168752 | Msa0159180:CDS | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr1_4:29168739-29168758 | Msa0159180:CDS | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr1_4:29168743-29168762 | Msa0159180:CDS | 40.0% | |
| TTTGGATGGAGGATTTAGGA+GGG | + | chr1_4:29168952-29168971 | None:intergenic | 40.0% | |
| TGTGTTTGGATGGAGGATTT+AGG | + | chr1_4:29168956-29168975 | None:intergenic | 40.0% | |
| ! | CAATAGACTAAGGGTGTGTT+TGG | + | chr1_4:29168970-29168989 | None:intergenic | 40.0% |
| AAGTTGTTGTCACGTCTGAA+AGG | - | chr1_4:29168993-29169012 | Msa0159180:intron | 40.0% | |
| GAAAGATATCTTCCAGCAAG+AGG | - | chr1_4:29169146-29169165 | Msa0159180:intron | 40.0% | |
| TCCAGCAAGAGGATAAACAA+TGG | - | chr1_4:29169157-29169176 | Msa0159180:intron | 40.0% | |
| ACCATTGTTTATCCTCTTGC+TGG | + | chr1_4:29169161-29169180 | None:intergenic | 40.0% | |
| ! | TCTAGGATCGACCTTCAAAA+AGG | + | chr1_4:29169252-29169271 | None:intergenic | 40.0% |
| GTACTCTTAGAACACTTCGA+CGG | - | chr1_4:29169320-29169339 | Msa0159180:intron | 40.0% | |
| AAGCCAAGAGAACAACTAAC+CGG | + | chr1_4:29169436-29169455 | None:intergenic | 40.0% | |
| !! | AATGATGGATCTTGGTGTGA+TGG | + | chr1_4:29169578-29169597 | None:intergenic | 40.0% |
| GGAAGAAGAGGAATTTACCA+AGG | - | chr1_4:29169910-29169929 | Msa0159180:CDS | 40.0% | |
| ACATCAAACTTTGCAAGTGG+TGG | - | chr1_4:29169966-29169985 | Msa0159180:CDS | 40.0% | |
| ! | ATTTTCAGCAGAGGAGGTTA+AGG | - | chr1_4:29169996-29170015 | Msa0159180:intron | 40.0% |
| !! | GATTTGGAGTTTTCCTGAGT+TGG | - | chr1_4:29170215-29170234 | Msa0159180:intron | 40.0% |
| TACAACCCATGGATTCATGA+CGG | + | chr1_4:29170329-29170348 | None:intergenic | 40.0% | |
| TTGAGCAAGAATACAACCCA+TGG | + | chr1_4:29170340-29170359 | None:intergenic | 40.0% | |
| TTGTGTGGAGGCAATCTTTA+GGG | + | chr1_4:29170652-29170671 | None:intergenic | 40.0% | |
| ATTGTGTGGAGGCAATCTTT+AGG | + | chr1_4:29170653-29170672 | None:intergenic | 40.0% | |
| ! | AGTTTAGAGTGGAGGCAAAT+AGG | + | chr1_4:29170694-29170713 | None:intergenic | 40.0% |
| TGAGACAGATTCAGATACAG+AGG | - | chr1_4:29171237-29171256 | Msa0159180:CDS | 40.0% | |
| ! | TACAGAGGATTTGGTAAAGG+AGG | - | chr1_4:29171252-29171271 | Msa0159180:CDS | 40.0% |
| GGAGGAGAAACCTCTTTATT+TGG | - | chr1_4:29171270-29171289 | Msa0159180:CDS | 40.0% | |
| ! | AATTTTCCGGAGCAAAGTGA+TGG | - | chr1_4:29171304-29171323 | Msa0159180:CDS | 40.0% |
| ! | ATTTTCCGGAGCAAAGTGAT+GGG | - | chr1_4:29171305-29171324 | Msa0159180:CDS | 40.0% |
| ! | TGGGGATACAGATGATTTTG+AGG | - | chr1_4:29171324-29171343 | Msa0159180:CDS | 40.0% |
| CTGGTCAACTTCATCAAACT+TGG | + | chr1_4:29171407-29171426 | None:intergenic | 40.0% | |
| AAGGGGGAAAAAAGAGTTGA+TGG | + | chr1_4:29171603-29171622 | None:intergenic | 40.0% | |
| GATAGTACTTGTCAGAAAGG+GGG | + | chr1_4:29171619-29171638 | None:intergenic | 40.0% | |
| CTATCAACTACGGATGTGTT+TGG | - | chr1_4:29171634-29171653 | Msa0159180:CDS | 40.0% | |
| GCGAAGTAAGAAAGTGGTAG+AGG | + | chr1_4:29168126-29168145 | None:intergenic | 45.0% | |
| TTTGCGGCGAAGTAAGAAAG+TGG | + | chr1_4:29168132-29168151 | None:intergenic | 45.0% | |
| TCTTACTTCGCCGCAAAACA+AGG | - | chr1_4:29168135-29168154 | Msa0159180:three_prime_UTR | 45.0% | |
| !! | GTTCAATTGATGGCGTTCCT+GGG | + | chr1_4:29168334-29168353 | None:intergenic | 45.0% |
| CTCGTGTAGAAGTAGAAGGA+AGG | + | chr1_4:29168356-29168375 | None:intergenic | 45.0% | |
| CCTACTCGTGTAGAAGTAGA+AGG | + | chr1_4:29168360-29168379 | None:intergenic | 45.0% | |
| CCTTCTACTTCTACACGAGT+AGG | - | chr1_4:29168357-29168376 | Msa0159180:CDS | 45.0% | |
| GTGATGTCAAAGTAACGACG+AGG | - | chr1_4:29168457-29168476 | Msa0159180:CDS | 45.0% | |
| GAAATGCTAGTGTCTCAGTG+TGG | - | chr1_4:29168612-29168631 | Msa0159180:CDS | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | - | chr1_4:29168732-29168751 | Msa0159180:CDS | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr1_4:29168742-29168761 | Msa0159180:CDS | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr1_4:29168744-29168763 | Msa0159180:CDS | 45.0% | |
| TTGGATGGAGGATTTAGGAG+GGG | + | chr1_4:29168951-29168970 | None:intergenic | 45.0% | |
| GTTTGGATGGAGGATTTAGG+AGG | + | chr1_4:29168953-29168972 | None:intergenic | 45.0% | |
| ! | AGACTAAGGGTGTGTTTGGA+TGG | + | chr1_4:29168966-29168985 | None:intergenic | 45.0% |
| AAAATGGTGAGACCCCTTCT+CGG | - | chr1_4:29169082-29169101 | Msa0159180:intron | 45.0% | |
| CTAAAGCTCCTGCATATGCA+GGG | + | chr1_4:29169109-29169128 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGCATATGC+AGG | + | chr1_4:29169110-29169129 | None:intergenic | 45.0% | |
| GCGTCAATATCTCAGGATCA+TGG | + | chr1_4:29169831-29169850 | None:intergenic | 45.0% | |
| TCTTCTGGCGTCAATATCTC+AGG | + | chr1_4:29169838-29169857 | None:intergenic | 45.0% | |
| TATGTGCCAGTTGGAAGAAG+AGG | - | chr1_4:29169898-29169917 | Msa0159180:CDS | 45.0% | |
| ! | GGTGAAGACATTTTCAGCAG+AGG | - | chr1_4:29169987-29170006 | Msa0159180:CDS | 45.0% |
| ! | GAAGACATTTTCAGCAGAGG+AGG | - | chr1_4:29169990-29170009 | Msa0159180:intron | 45.0% |
| ! | TTGACTGGAGGTATAGTGCT+TGG | - | chr1_4:29170042-29170061 | Msa0159180:intron | 45.0% |
| AGTGCTTGGCATTCATGAAG+AGG | - | chr1_4:29170056-29170075 | Msa0159180:intron | 45.0% | |
| GGAGACATTATCTCTGTTGG+TGG | + | chr1_4:29170120-29170139 | None:intergenic | 45.0% | |
| CGTGGAGACATTATCTCTGT+TGG | + | chr1_4:29170123-29170142 | None:intergenic | 45.0% | |
| AGTCACTCTCCCAAGAAAGA+AGG | - | chr1_4:29170143-29170162 | Msa0159180:intron | 45.0% | |
| ! | TTTTCGCCGTCATGAATCCA+TGG | - | chr1_4:29170320-29170339 | Msa0159180:intron | 45.0% |
| TTTCGCCGTCATGAATCCAT+GGG | - | chr1_4:29170321-29170340 | Msa0159180:intron | 45.0% | |
| TAGAGTGGAGGCAAATAGGA+AGG | + | chr1_4:29170690-29170709 | None:intergenic | 45.0% | |
| TAGGCAAGGGAAGTTTAGAG+TGG | + | chr1_4:29170705-29170724 | None:intergenic | 45.0% | |
| ACATTGCAGAGGTTAGGCAA+GGG | + | chr1_4:29170718-29170737 | None:intergenic | 45.0% | |
| TAGTTCTCACTGTCTCTCCT+TGG | - | chr1_4:29170889-29170908 | Msa0159180:intron | 45.0% | |
| AGTTCTCACTGTCTCTCCTT+GGG | - | chr1_4:29170890-29170909 | Msa0159180:intron | 45.0% | |
| GAATATATCTCCTCACAGCG+CGG | + | chr1_4:29170967-29170986 | None:intergenic | 45.0% | |
| AGTAACACAGAAGCAGCTGA+AGG | - | chr1_4:29171043-29171062 | Msa0159180:intron | 45.0% | |
| GGCACATATGGACTCTGATT+TGG | - | chr1_4:29171183-29171202 | Msa0159180:CDS | 45.0% | |
| ! | TTTTCCGGAGCAAAGTGATG+GGG | - | chr1_4:29171306-29171325 | Msa0159180:CDS | 45.0% |
| ATGCAGCACGTAGGAAAATC+TGG | + | chr1_4:29171426-29171445 | None:intergenic | 45.0% | |
| ACTACGGATGTGTTTGGATG+AGG | - | chr1_4:29171640-29171659 | Msa0159180:CDS | 45.0% | |
| CTACGGATGTGTTTGGATGA+GGG | - | chr1_4:29171641-29171660 | Msa0159180:CDS | 45.0% | |
| GTCGTGACGAGAGAGAGAAA+TGG | - | chr1_4:29168046-29168065 | Msa0159180:three_prime_UTR | 50.0% | |
| !! | GGTTCAATTGATGGCGTTCC+TGG | + | chr1_4:29168335-29168354 | None:intergenic | 50.0% |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr1_4:29168748-29168767 | Msa0159180:CDS | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr1_4:29168749-29168768 | Msa0159180:CDS | 50.0% | |
| TGGAGGATTTAGGAGGGGAA+GGG | + | chr1_4:29168946-29168965 | None:intergenic | 50.0% | |
| ATGGAGGATTTAGGAGGGGA+AGG | + | chr1_4:29168947-29168966 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | + | chr1_4:29168963-29168982 | None:intergenic | 50.0% |
| ! | GAGAAGGGGTCTCACCATTT+TGG | + | chr1_4:29169083-29169102 | None:intergenic | 50.0% |
| TGTGTAGATCAGGTTAGCGC+CGG | - | chr1_4:29169414-29169433 | Msa0159180:intron | 50.0% | |
| TAAGGAGATTGCCACTGAGC+TGG | - | chr1_4:29170014-29170033 | Msa0159180:intron | 50.0% | |
| AGTCAATCTTGCCAGCTCAG+TGG | + | chr1_4:29170028-29170047 | None:intergenic | 50.0% | |
| ACTGAGCTGGCAAGATTGAC+TGG | - | chr1_4:29170027-29170046 | Msa0159180:intron | 50.0% | |
| TTTCTTGGGAGAGTGACTCG+TGG | + | chr1_4:29170141-29170160 | None:intergenic | 50.0% | |
| ! | GCAAGGGAAGTTTAGAGTGG+AGG | + | chr1_4:29170702-29170721 | None:intergenic | 50.0% |
| CACATTGCAGAGGTTAGGCA+AGG | + | chr1_4:29170719-29170738 | None:intergenic | 50.0% | |
| TCGAGCTCTTGCTCGAGTTT+GGG | + | chr1_4:29170989-29171008 | None:intergenic | 50.0% | |
| TTCGAGCTCTTGCTCGAGTT+TGG | + | chr1_4:29170990-29171009 | None:intergenic | 50.0% | |
| TGATAACAACGGTTGCTCGG+AGG | - | chr1_4:29171156-29171175 | Msa0159180:intron | 50.0% | |
| GTATCCCCATCACTTTGCTC+CGG | + | chr1_4:29171313-29171332 | None:intergenic | 50.0% | |
| GACGAGAGAGAGAAATGGCG+TGG | - | chr1_4:29168051-29168070 | Msa0159180:three_prime_UTR | 55.0% | |
| GAGAGAGAGAAATGGCGTGG+AGG | - | chr1_4:29168054-29168073 | Msa0159180:three_prime_UTR | 55.0% | |
| GATTTAGGAGGGGAAGGGAG+GGG | + | chr1_4:29168941-29168960 | None:intergenic | 55.0% | |
| GGATTTAGGAGGGGAAGGGA+GGG | + | chr1_4:29168942-29168961 | None:intergenic | 55.0% | |
| AGGATTTAGGAGGGGAAGGG+AGG | + | chr1_4:29168943-29168962 | None:intergenic | 55.0% | |
| CATATGCAGGGTCCGAGAAG+GGG | + | chr1_4:29169097-29169116 | None:intergenic | 55.0% | |
| GCATATGCAGGGTCCGAGAA+GGG | + | chr1_4:29169098-29169117 | None:intergenic | 55.0% | |
| TGCATATGCAGGGTCCGAGA+AGG | + | chr1_4:29169099-29169118 | None:intergenic | 55.0% | |
| TTCTCGGACCCTGCATATGC+AGG | - | chr1_4:29169098-29169117 | Msa0159180:intron | 55.0% | |
| !! | GCGCCGGTTAGTTGTTCTCT+TGG | - | chr1_4:29169430-29169449 | Msa0159180:intron | 55.0% |
| GAGCTGGCAAGATTGACTGG+AGG | - | chr1_4:29170030-29170049 | Msa0159180:intron | 55.0% | |
| TATATCTCCTCACAGCGCGG+AGG | + | chr1_4:29170964-29170983 | None:intergenic | 55.0% | |
| CTCGGAGGATGAGGCACATA+TGG | - | chr1_4:29171171-29171190 | Msa0159180:CDS | 55.0% | |
| CTCTCTCTCGTCACGACCCA+CGG | + | chr1_4:29168043-29168062 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr1_4:29168752-29168771 | Msa0159180:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr1_4:29168753-29168772 | Msa0159180:CDS | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr1_4:29168754-29168773 | Msa0159180:CDS | 60.0% | |
| CAACGGTTGCTCGGAGGATG+AGG | - | chr1_4:29171162-29171181 | Msa0159180:intron | 60.0% | |
| AGTATCTGCCTCCACCGCCG+TGG | - | chr1_4:29168023-29168042 | Msa0159180:three_prime_UTR | 65.0% | |
| GTATCTGCCTCCACCGCCGT+GGG | - | chr1_4:29168024-29168043 | Msa0159180:three_prime_UTR | 65.0% | |
| TCTCTCGTCACGACCCACGG+CGG | + | chr1_4:29168040-29168059 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr1_4:29168757-29168776 | Msa0159180:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr1_4:29168758-29168777 | Msa0159180:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr1_4:29168758-29168777 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1_4:29168757-29168776 | None:intergenic | 65.0% | |
| GTCACGACCCACGGCGGTGG+AGG | + | chr1_4:29168034-29168053 | None:intergenic | 75.0% | |
| CTCGTCACGACCCACGGCGG+TGG | + | chr1_4:29168037-29168056 | None:intergenic | 75.0% | |
| GGGATGGCCTCCGCGCTGTG+AGG | - | chr1_4:29170954-29170973 | Msa0159180:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 29167997 | 29171768 | 29167997 | ID=Msa0159180;Name=Msa0159180 |
| chr1_4 | mRNA | 29167997 | 29171768 | 29167997 | ID=Msa0159180-mRNA-1;Parent=Msa0159180;Name=Msa0159180-mRNA-1;_AED=0.02;_eAED=0.02;_QI=68|1|1|1|1|1|4|297|444 |
| chr1_4 | exon | 29167997 | 29168833 | 29167997 | ID=Msa0159180-mRNA-1:exon:9433;Parent=Msa0159180-mRNA-1 |
| chr1_4 | exon | 29169601 | 29170008 | 29169601 | ID=Msa0159180-mRNA-1:exon:9432;Parent=Msa0159180-mRNA-1 |
| chr1_4 | exon | 29171169 | 29171463 | 29171169 | ID=Msa0159180-mRNA-1:exon:9431;Parent=Msa0159180-mRNA-1 |
| chr1_4 | exon | 29171609 | 29171768 | 29171609 | ID=Msa0159180-mRNA-1:exon:9430;Parent=Msa0159180-mRNA-1 |
| chr1_4 | five_prime_UTR | 29171701 | 29171768 | 29171701 | ID=Msa0159180-mRNA-1:five_prime_utr;Parent=Msa0159180-mRNA-1 |
| chr1_4 | CDS | 29171609 | 29171700 | 29171609 | ID=Msa0159180-mRNA-1:cds;Parent=Msa0159180-mRNA-1 |
| chr1_4 | CDS | 29171169 | 29171463 | 29171169 | ID=Msa0159180-mRNA-1:cds;Parent=Msa0159180-mRNA-1 |
| chr1_4 | CDS | 29169601 | 29170008 | 29169601 | ID=Msa0159180-mRNA-1:cds;Parent=Msa0159180-mRNA-1 |
| chr1_4 | CDS | 29168294 | 29168833 | 29168294 | ID=Msa0159180-mRNA-1:cds;Parent=Msa0159180-mRNA-1 |
| chr1_4 | three_prime_UTR | 29167997 | 29168293 | 29167997 | ID=Msa0159180-mRNA-1:three_prime_utr;Parent=Msa0159180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
