AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692830 MtrunA17_Chr4g0043241 96.909 647 13 3 1 641 1 646 0.0 1270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692830 AT2G03667.1 59.476 649 214 10 1 639 1 610 0.0 707
Msa0692830 AT2G03667.2 56.872 633 222 11 1 623 1 592 0.0 651

Find 148 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATTTGGAAGAGAAATTT+AGG 0.134029 4_4:-61502121 Msa0692830:CDS
TTCGAATTCAAACGGATTTC+TGG 0.151787 4_4:-61506731 Msa0692830:intron
TTAACATTGGAATAGCTTTA+TGG 0.154371 4_4:-61503238 Msa0692830:CDS
GAATCAAATCGGAAGAATTT+TGG 0.199066 4_4:-61500913 Msa0692830:CDS
TATGATACTTGCGGCATTAC+TGG 0.227735 4_4:-61505214 Msa0692830:CDS
TTCTCCGCAGAGCTTCTTTC+AGG 0.244260 4_4:+61508503 None:intergenic
GATGTTCTTTCTACAATTAA+AGG 0.246010 4_4:-61507795 Msa0692830:CDS
AGGATTCTCCTTGTTGGTTC+TGG 0.256567 4_4:-61503131 Msa0692830:CDS
AACTCGACATGCAAAGAATT+TGG 0.259227 4_4:-61502135 Msa0692830:CDS
ATTTGTAGGAAATCAAATTT+TGG 0.264241 4_4:-61500847 Msa0692830:CDS
CGTTTCGTCGTGTTCTATAA+AGG 0.266928 4_4:+61508417 None:intergenic
CTACTTACTGTAAGCTTTGA+TGG 0.268070 4_4:-61504455 Msa0692830:CDS
TTAGGCTAGATTTCCATTCT+TGG 0.295521 4_4:-61501972 Msa0692830:intron
GAATTTGGAAGAGAAATTTA+GGG 0.314158 4_4:-61502120 Msa0692830:CDS
GAATTGAACATCTTAGTTAC+TGG 0.314500 4_4:-61506795 Msa0692830:CDS
ATACCAGTGGCCTGCTGATC+TGG 0.314738 4_4:+61507529 None:intergenic
TCTTGGATGAGGATGTTATA+AGG 0.320991 4_4:-61501955 Msa0692830:CDS
CGGTGCAACTTTGCAGCTTA+GGG 0.326746 4_4:-61508347 Msa0692830:CDS
TTCTTCACACCCAAGCTATC+AGG 0.334928 4_4:+61508475 None:intergenic
ATAGCTTTATGGCTCGCTTC+TGG 0.341166 4_4:-61503227 Msa0692830:CDS
TCGGTGCAACTTTGCAGCTT+AGG 0.341471 4_4:-61508348 Msa0692830:CDS
ATTGCATAGGCTGTGATATC+TGG 0.346833 4_4:-61505294 Msa0692830:intron
TCCGCTTGTTCAGCCTTTAG+TGG 0.349517 4_4:-61508317 Msa0692830:CDS
CGAAACATTCTGGTGTATAA+TGG 0.352754 4_4:-61508286 Msa0692830:intron
GATGAACAGTGTGCTGGTTA+TGG 0.367158 4_4:-61503104 Msa0692830:CDS
GGATGCTTCTCGAAACATTC+TGG 0.367158 4_4:-61508296 Msa0692830:CDS
GTTCTATAAAGGATGAGATT+TGG 0.372374 4_4:+61508428 None:intergenic
GCCTGCTGATCTGGAGCAAC+TGG 0.375811 4_4:+61507538 None:intergenic
CGCTTCTGGTGGTGATGGAT+GGG 0.378774 4_4:-61503213 Msa0692830:CDS
CTTGGATGAGGATGTTATAA+GGG 0.386802 4_4:-61501954 Msa0692830:CDS
TGATGCTGACTTGTCAGATT+TGG 0.390352 4_4:-61503409 Msa0692830:CDS
TTGGGGAAGTTGAGTGGAAT+GGG 0.390754 4_4:+61508777 None:intergenic
CTGAAGGTTGCACAATTGCT+TGG 0.402771 4_4:-61501084 Msa0692830:intron
GCAGAAAATGAAGCTCATAA+TGG 0.407580 4_4:-61506817 Msa0692830:intron
TCGCTTCTGGTGGTGATGGA+TGG 0.408976 4_4:-61503214 Msa0692830:CDS
TCCTGTGGTTCTTATTTGAC+TGG 0.408994 4_4:-61507852 Msa0692830:CDS
TCTTCCCAAGCGGGCAATCC+AGG 0.409100 4_4:-61501043 Msa0692830:intron
GCACACCTGGATTGCCCGCT+TGG 0.411228 4_4:+61501038 None:intergenic
AATGCAAGGATTCTCCTTGT+TGG 0.411893 4_4:-61503137 Msa0692830:CDS
ATGAACAGTGTGCTGGTTAT+GGG 0.415694 4_4:-61503103 Msa0692830:CDS
GTCATTGTATACTATCTATC+AGG 0.417008 4_4:-61506299 Msa0692830:intron
CTTGGGAATTGTTGCTCCTG+TGG 0.427510 4_4:-61507867 Msa0692830:CDS
CAGGCAGTGTAAGGATTTGT+AGG 0.429146 4_4:-61500861 Msa0692830:CDS
AGGATAGTTCAAGGACCCTT+TGG 0.431242 4_4:-61507648 Msa0692830:CDS
AAGTAATCGAGCAGCAAATC+AGG 0.431308 4_4:-61500890 Msa0692830:CDS
TTCTATTGCAGGATAGTTCA+AGG 0.432555 4_4:-61507657 Msa0692830:intron
ATAAAGCTATTCCAATGTTA+AGG 0.439997 4_4:+61503240 None:intergenic
GGAATTGCATTGACCGTCTC+AGG 0.441436 4_4:-61508824 Msa0692830:CDS
GGCGGAGCCTTCTTGTTCAC+TGG 0.445360 4_4:-61507603 Msa0692830:CDS
AGTTCAAGGACCCTTTGGTT+TGG 0.446623 4_4:-61507643 Msa0692830:CDS
GACCATGGGCTATCATCTAT+TGG 0.452967 4_4:-61507773 Msa0692830:CDS
AGTTTCTTATGCAGACTCTT+GGG 0.458584 4_4:-61507884 Msa0692830:CDS
AGGCGTCTGCAGGCAGTGTA+AGG 0.458985 4_4:-61500870 Msa0692830:CDS
CACACCTGGATTGCCCGCTT+GGG 0.462355 4_4:+61501039 None:intergenic
TTTGGGGAAGTTGAGTGGAA+TGG 0.465230 4_4:+61508776 None:intergenic
AGTTGAGTGGAATGGGAGAG+AGG 0.468545 4_4:+61508784 None:intergenic
AGCACTCACAACTGGGATCC+AGG 0.469254 4_4:+61505184 None:intergenic
GAGAAGAGGTCCTGATAGCT+TGG 0.474458 4_4:-61508485 Msa0692830:CDS
TGGTTTGGCCGAGATGCATT+TGG 0.474834 4_4:-61507628 Msa0692830:CDS
TGGCTCGCTTCTGGTGGTGA+TGG 0.475719 4_4:-61503218 Msa0692830:CDS
ATAGATGTATTGCTGATAAC+GGG 0.477324 4_4:-61502090 Msa0692830:CDS
ATATGCCTTAATCAGTTGGC+TGG 0.477902 4_4:-61502176 Msa0692830:intron
GAGTTTCTTATGCAGACTCT+TGG 0.484407 4_4:-61507885 Msa0692830:CDS
GATAGAAAATCTGCCAAGGC+AGG 0.484885 4_4:-61504419 Msa0692830:CDS
TTTACTCAACATTCCATTGT+GGG 0.487822 4_4:-61501930 Msa0692830:CDS
TAGTTCTTTCAACCCTGCCT+TGG 0.492382 4_4:+61504406 None:intergenic
TTCTACAATTAAAGGACCAT+GGG 0.492445 4_4:-61507787 Msa0692830:CDS
GCAGCAAATCAGGCGTCTGC+AGG 0.493660 4_4:-61500880 Msa0692830:CDS
TAGATTTCCATTCTTGGATG+AGG 0.494104 4_4:-61501966 Msa0692830:CDS
TGGATTGCATACCGTCTTGA+CGG 0.501054 4_4:+61504371 None:intergenic
GCCAGTTGCTCCAGATCAGC+AGG 0.501944 4_4:-61507539 Msa0692830:CDS
ATATACAAACTCAACATTGA+AGG 0.502927 4_4:-61506686 Msa0692830:CDS
CCAGAGAAAAGAATTGCAAC+AGG 0.504982 4_4:+61505249 None:intergenic
GATAGATGTATTGCTGATAA+CGG 0.505667 4_4:-61502091 Msa0692830:CDS
GGCGATTTGGGGAAGTTGAG+TGG 0.513848 4_4:+61508771 None:intergenic
TTTCTACAATTAAAGGACCA+TGG 0.517454 4_4:-61507788 Msa0692830:CDS
ATGCATCTCGGCCAAACCAA+AGG 0.517811 4_4:+61507632 None:intergenic
GAATTGCGAGGGAATCAAAT+CGG 0.518766 4_4:-61500924 Msa0692830:CDS
TATGCCTTAATCAGTTGGCT+GGG 0.520727 4_4:-61502175 Msa0692830:intron
GAGACAGTTCCATGCGAAGC+AGG 0.526342 4_4:-61506556 Msa0692830:intron
GATTAGTACCATGTAGGTGT+TGG 0.527041 4_4:+61503347 None:intergenic
CTTTATATATATATTATGCC+TGG 0.533641 4_4:-61500722 Msa0692830:three_prime_UTR
AATTGAACATCTTAGTTACT+GGG 0.534296 4_4:-61506794 Msa0692830:CDS
AGAAGAGGTCCTGATAGCTT+GGG 0.535911 4_4:-61508484 Msa0692830:CDS
GCCACTAGGTTGATCAAGGT+TGG 0.537230 4_4:+61501901 None:intergenic
GCCGAGATGCATTTGGTAGG+CGG 0.538103 4_4:-61507621 Msa0692830:CDS
ATAACATCCTCATCCAAGAA+TGG 0.538611 4_4:+61501959 None:intergenic
TTTCGAGAAGCATCCACTAA+AGG 0.538876 4_4:+61508304 None:intergenic
GTGGATGCTTCGAATTCAAA+CGG 0.541109 4_4:-61506739 Msa0692830:CDS
TGCATCTCGGCCAAACCAAA+GGG 0.542020 4_4:+61507633 None:intergenic
ATGGGCTATCATCTATTGGC+AGG 0.544781 4_4:-61507769 Msa0692830:intron
GGCATTACTGGATCAATGCC+TGG 0.546449 4_4:-61505202 Msa0692830:CDS
CGATGCCACTAGGTTGATCA+AGG 0.546600 4_4:+61501897 None:intergenic
AACAAGGAGAATCCTTGCAT+TGG 0.546989 4_4:+61503139 None:intergenic
AACGGAGAACTTCATTTCAT+CGG 0.547006 4_4:-61508367 Msa0692830:CDS
AACTGTGTTAAATGCGGGAA+AGG 0.547646 4_4:-61507828 Msa0692830:CDS
GGTGCTGATGAACAGTGTGC+TGG 0.549892 4_4:-61503110 Msa0692830:CDS
GCTCCAGATCAGCAGGCCAC+TGG 0.553421 4_4:-61507532 Msa0692830:intron
ACTTAGGGCAGGATGTCTGC+AGG 0.555484 4_4:+61506617 None:intergenic
TAGTAATAACCTGCTTCGCA+TGG 0.561332 4_4:+61506547 None:intergenic
AAAGAAGCTCTGCGGAGAAG+AGG 0.562727 4_4:-61508499 Msa0692830:CDS
TTGGCCGAGATGCATTTGGT+AGG 0.570304 4_4:-61507624 Msa0692830:CDS
CTTGATCAACCTAGTGGCAT+CGG 0.570501 4_4:-61501896 Msa0692830:CDS
TCCACTAAAGGCTGAACAAG+CGG 0.574215 4_4:+61508316 None:intergenic
AGCAGCGGTTCTTCCCAAGC+GGG 0.574387 4_4:-61501052 Msa0692830:CDS
AGTACCATGTAGGTGTTGGA+AGG 0.577841 4_4:+61503351 None:intergenic
AGCAACATATGAGCTCGCAT+TGG 0.577951 4_4:+61506355 None:intergenic
ACCAGTCAAATAAGAACCAC+AGG 0.577955 4_4:+61507851 None:intergenic
AAAGTTGAATCATCTTCTGT+AGG 0.580809 4_4:+61507580 None:intergenic
AAATCCTTCCAACACCTACA+TGG 0.583957 4_4:-61503355 Msa0692830:intron
TCCGCCTACCAAATGCATCT+CGG 0.585873 4_4:+61507620 None:intergenic
GCTTTATGGCTCGCTTCTGG+TGG 0.587213 4_4:-61503224 Msa0692830:CDS
GGTGCAACTTTGCAGCTTAG+GGG 0.596413 4_4:-61508346 Msa0692830:CDS
GTTTGGTTCTAGAATTGCGA+GGG 0.601355 4_4:-61500935 Msa0692830:CDS
AGGTTGGCAACCTCCCACAA+TGG 0.602775 4_4:+61501917 None:intergenic
CTGGTAACTGTGTTAAATGC+GGG 0.603339 4_4:-61507833 Msa0692830:CDS
AGGATTGATTAGTACCATGT+AGG 0.603931 4_4:+61503341 None:intergenic
ACTCAACATTCCATTGTGGG+AGG 0.607103 4_4:-61501927 Msa0692830:CDS
ATGCCTTAATCAGTTGGCTG+GGG 0.607245 4_4:-61502174 Msa0692830:intron
AAGAGTCTGCATAAGAAACT+CGG 0.611073 4_4:+61507887 None:intergenic
CAGTTGGCTGGGGCTAGATG+AGG 0.613342 4_4:-61502164 Msa0692830:CDS
TTAAATACAAGTCCAATGCA+AGG 0.613359 4_4:-61503151 Msa0692830:CDS
GAAGCAGAAACGAAGATGTG+TGG 0.614701 4_4:-61508845 None:intergenic
ATAGAAAATCTGCCAAGGCA+GGG 0.618548 4_4:-61504418 Msa0692830:CDS
CTGTAGGCCAGTGAACAAGA+AGG 0.621892 4_4:+61507596 None:intergenic
TCCTGATAGAAAATCTGCCA+AGG 0.622329 4_4:-61504423 Msa0692830:CDS
CATTGAAGGAACTTATCAAG+TGG 0.622380 4_4:-61506672 Msa0692830:CDS
AAAGGCAGTATAGTAGCACC+AGG 0.624881 4_4:+61500704 None:intergenic
CATCAGCACCAGAACCAACA+AGG 0.625991 4_4:+61503123 None:intergenic
ATTGAAGGAACTTATCAAGT+GGG 0.628054 4_4:-61506671 Msa0692830:CDS
GCTGGATTCTATGATACTTG+CGG 0.628488 4_4:-61505223 Msa0692830:CDS
GTTAATTCGAATGCCTGAGA+CGG 0.629293 4_4:+61508811 None:intergenic
AAAGAGTTGCACCGTCAAGA+CGG 0.637047 4_4:-61504382 Msa0692830:intron
TGCCAATAGATGATAGCCCA+TGG 0.642233 4_4:+61507771 None:intergenic
AAAGTGCAGGTGGAGACTCG+TGG 0.644656 4_4:-61503436 Msa0692830:intron
ATGTATTGCTGATAACGGGA+AGG 0.646619 4_4:-61502086 Msa0692830:CDS
ATAATGATGACACTCATGCA+CGG 0.647092 4_4:-61503175 Msa0692830:CDS
TATTGCTGATAACGGGAAGG+AGG 0.649083 4_4:-61502083 Msa0692830:intron
GCTTGGTTTATATGAAGCAG+CGG 0.661880 4_4:-61501067 Msa0692830:CDS
AAGCAGCGGTTCTTCCCAAG+CGG 0.665430 4_4:-61501053 Msa0692830:CDS
TCTGCAAATGAAGACAGTAA+CGG 0.682909 4_4:-61508385 Msa0692830:CDS
ACTGGTAACTGTGTTAAATG+CGG 0.692384 4_4:-61507834 Msa0692830:CDS
TACTGGGAAGAGCTACCATG+TGG 0.698665 4_4:-61506778 Msa0692830:CDS
GCCAACCTTGATCAACCTAG+TGG 0.703456 4_4:-61501902 Msa0692830:CDS
TGCATACTATATATTCCACA+TGG 0.727847 4_4:+61506763 None:intergenic
ATGACCTGAAAGAAGCTCTG+CGG 0.729969 4_4:-61508507 Msa0692830:CDS
AGTTTGGTTCTAGAATTGCG+AGG 0.738420 4_4:-61500936 Msa0692830:CDS
TGGAATATATAGTATGCACG+TGG 0.745413 4_4:-61506758 Msa0692830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTCTAATAATTGAATT+TGG - chr4_4:61504088-61504107 Msa0692830:intron 10.0%
!! AAATAAAATTCAATATCATA+TGG + chr4_4:61505367-61505386 None:intergenic 10.0%
!! TTAAGTAAAACAAAAAGTTA+TGG + chr4_4:61500979-61500998 None:intergenic 15.0%
!!! TAATTTTTTTTATGTTCTTC+AGG - chr4_4:61501603-61501622 Msa0692830:intron 15.0%
!!! ATTTCTATTATATGTTTTGT+AGG - chr4_4:61504111-61504130 Msa0692830:intron 15.0%
!!! TTTCTATTATATGTTTTGTA+GGG - chr4_4:61504112-61504131 Msa0692830:intron 15.0%
!! AAAAAGATATAAAGTAAACA+TGG + chr4_4:61505209-61505228 None:intergenic 15.0%
!!! ACTATTTTCAATTTGAAATT+AGG + chr4_4:61505548-61505567 None:intergenic 15.0%
!!! CACATATTCTAAAATTTAAT+TGG + chr4_4:61506710-61506729 None:intergenic 15.0%
!! AAATGATGGTAAAAATATTT+AGG + chr4_4:61506933-61506952 None:intergenic 15.0%
!! TAATTGAGAAAATAAAATGA+TGG + chr4_4:61506947-61506966 None:intergenic 15.0%
!!! TTTTTATATATGAATTGGAT+TGG - chr4_4:61508807-61508826 Msa0692830:CDS 15.0%
!!! ATTAACTTACATTTTCAGAT+TGG + chr4_4:61500810-61500829 None:intergenic 20.0%
!! ATATCAACATTTCTACAATA+GGG - chr4_4:61501392-61501411 Msa0692830:intron 20.0%
!!! CTTTTTTACTAAATGACAAT+AGG + chr4_4:61502139-61502158 None:intergenic 20.0%
!! ATTTATCTCAAGAATTTCAT+TGG - chr4_4:61502312-61502331 Msa0692830:intron 20.0%
!! TTGAAGATGATTACAAAATA+TGG + chr4_4:61502380-61502399 None:intergenic 20.0%
!! AGAGATTGTCAAAAATTTAA+GGG + chr4_4:61503147-61503166 None:intergenic 20.0%
!!! TATGTTGCTAAATGTTTTAA+AGG - chr4_4:61503216-61503235 Msa0692830:CDS 20.0%
!! TCTTATTAACATCATACAAA+CGG + chr4_4:61503369-61503388 None:intergenic 20.0%
!!! TAATAAGATGTTTTCAACTT+TGG - chr4_4:61503381-61503400 Msa0692830:CDS 20.0%
!!! AATAAGATGTTTTCAACTTT+GGG - chr4_4:61503382-61503401 Msa0692830:CDS 20.0%
!! TCTTGAAATTTCAAAAAACA+AGG - chr4_4:61503875-61503894 Msa0692830:intron 20.0%
!! TTTAGTTACAATTTGCATAT+GGG + chr4_4:61504033-61504052 None:intergenic 20.0%
!! ATTTAGTTACAATTTGCATA+TGG + chr4_4:61504034-61504053 None:intergenic 20.0%
!! ATATACCATTTGTTCTTTAA+TGG - chr4_4:61504139-61504158 Msa0692830:intron 20.0%
!! TATACCATTTGTTCTTTAAT+GGG - chr4_4:61504140-61504159 Msa0692830:intron 20.0%
!! ATATAAAAGAAATCTACTGA+AGG + chr4_4:61504221-61504240 None:intergenic 20.0%
!! AATTCAAACTGCAATTAATT+AGG - chr4_4:61504525-61504544 Msa0692830:intron 20.0%
!! TTCTTCTAAATAAAGATTCA+AGG + chr4_4:61504817-61504836 None:intergenic 20.0%
!! ATTCATATGATTTAATCCAA+TGG + chr4_4:61504938-61504957 None:intergenic 20.0%
!! ATTGGATTAAATCATATGAA+TGG - chr4_4:61504937-61504956 Msa0692830:intron 20.0%
!! AAAGTCCAATTAAATGTTTA+AGG + chr4_4:61505262-61505281 None:intergenic 20.0%
!!! CATATATTTTTCATTGTTAG+AGG - chr4_4:61505428-61505447 Msa0692830:intron 20.0%
!!! TCAAGACATTTTAAAACAAT+AGG + chr4_4:61505662-61505681 None:intergenic 20.0%
!! TTTAATGGAATCCTAATTTA+GGG - chr4_4:61507008-61507027 Msa0692830:intron 20.0%
!! TATGAACAACAAAGTTAATA+GGG - chr4_4:61507148-61507167 Msa0692830:intron 20.0%
!!! ACTTAAAGTTTTTGATTGAT+AGG - chr4_4:61507201-61507220 Msa0692830:intron 20.0%
!! ACTATGAGATTAACAAATTA+GGG + chr4_4:61507534-61507553 None:intergenic 20.0%
!! AACTATGAGATTAACAAATT+AGG + chr4_4:61507535-61507554 None:intergenic 20.0%
!!! TTTGATTTGTTTTTCTCTTT+AGG - chr4_4:61507567-61507586 Msa0692830:CDS 20.0%
!!! TGATAAAAAGATTTTAAGAG+AGG - chr4_4:61507684-61507703 Msa0692830:intron 20.0%
!! AGATGTTAAGTTATTCAAAA+AGG + chr4_4:61507823-61507842 None:intergenic 20.0%
!!! AATTTTGAAGTGTAAAGTTT+TGG + chr4_4:61508548-61508567 None:intergenic 20.0%
!!! ATTTGTAGGAAATCAAATTT+TGG - chr4_4:61508710-61508729 Msa0692830:intron 20.0%
!! CTTTATATATATATTATGCC+TGG - chr4_4:61508835-61508854 Msa0692830:exon 20.0%
!! TCATTTTCTCAACTTATTGT+CGG - chr4_4:61500890-61500909 Msa0692830:CDS 25.0%
!! TTTTTACTGTGTGATTGATT+TGG - chr4_4:61501006-61501025 Msa0692830:intron 25.0%
! GATATCAACATTTCTACAAT+AGG - chr4_4:61501391-61501410 Msa0692830:intron 25.0%
! TGAAACATAGTTATAAACTG+TGG - chr4_4:61501465-61501484 Msa0692830:intron 25.0%
! GATGTTCTTTCTACAATTAA+AGG - chr4_4:61501762-61501781 Msa0692830:intron 25.0%
!!! TACTTTCTTTTTTCTATTGC+AGG - chr4_4:61501889-61501908 Msa0692830:CDS 25.0%
! TGGTATGTAATACATGAAAT+TGG - chr4_4:61502045-61502064 Msa0692830:intron 25.0%
! TGTAATACATGAAATTGGAA+TGG - chr4_4:61502050-61502069 Msa0692830:intron 25.0%
! ATAAATAGCGTCAATTAAAG+AGG + chr4_4:61502298-61502317 None:intergenic 25.0%
! CTAATTAATGCAAAAGTTTG+AGG + chr4_4:61502338-61502357 None:intergenic 25.0%
! CTGTATATAAATAAGAGGAA+GGG + chr4_4:61502597-61502616 None:intergenic 25.0%
! AATTGAACATCTTAGTTACT+GGG - chr4_4:61502763-61502782 Msa0692830:intron 25.0%
! ATATACAAACTCAACATTGA+AGG - chr4_4:61502871-61502890 Msa0692830:intron 25.0%
! GAACTGTGAATTAATACTAA+AGG + chr4_4:61503116-61503135 None:intergenic 25.0%
! CAGAGATTGTCAAAAATTTA+AGG + chr4_4:61503148-61503167 None:intergenic 25.0%
! CTTATTAACATCATACAAAC+GGG + chr4_4:61503368-61503387 None:intergenic 25.0%
!! ATAAGATGTTTTCAACTTTG+GGG - chr4_4:61503383-61503402 Msa0692830:CDS 25.0%
! ATCTCTAGTAACAAAACTTT+AGG + chr4_4:61503918-61503937 None:intergenic 25.0%
! TAATCCCATTAAAGAACAAA+TGG + chr4_4:61504147-61504166 None:intergenic 25.0%
! AATGTCGTTAAAGAATCTAA+AGG + chr4_4:61504170-61504189 None:intergenic 25.0%
! TTATATTTGTCATGACTCTT+TGG - chr4_4:61504235-61504254 Msa0692830:intron 25.0%
! AGAATAATCAAGATAGAAGA+AGG + chr4_4:61504417-61504436 None:intergenic 25.0%
! TATGATAGTTGCAGATTTAT+AGG - chr4_4:61504574-61504593 Msa0692830:intron 25.0%
! ATGATAGTTGCAGATTTATA+GGG - chr4_4:61504575-61504594 Msa0692830:intron 25.0%
! TTTAGAAGAATGAGATAAGA+AGG - chr4_4:61504827-61504846 Msa0692830:intron 25.0%
! TTCATCTGTCAATTAAAAAG+AGG + chr4_4:61505076-61505095 None:intergenic 25.0%
! CCAATTAAATGTTTAAGGAA+AGG + chr4_4:61505257-61505276 None:intergenic 25.0%
! CCTTTCCTTAAACATTTAAT+TGG - chr4_4:61505254-61505273 Msa0692830:CDS 25.0%
! TTCTTGTATGATTAATGACA+TGG - chr4_4:61505477-61505496 Msa0692830:intron 25.0%
!!! TTGCTGTTTGTATAATTTCA+TGG - chr4_4:61505743-61505762 Msa0692830:intron 25.0%
! AATTTCATGGAAGAATATAC+TGG - chr4_4:61505756-61505775 Msa0692830:intron 25.0%
! ATAAAGCTATTCCAATGTTA+AGG + chr4_4:61506320-61506339 None:intergenic 25.0%
!! TTAACATTGGAATAGCTTTA+TGG - chr4_4:61506319-61506338 Msa0692830:CDS 25.0%
! GTTTAATGGAATCCTAATTT+AGG - chr4_4:61507007-61507026 Msa0692830:intron 25.0%
!! TAGAAACTAAATTGATAGCA+AGG - chr4_4:61507091-61507110 Msa0692830:intron 25.0%
!! AGAAACTAAATTGATAGCAA+GGG - chr4_4:61507092-61507111 Msa0692830:intron 25.0%
! CTATGAACAACAAAGTTAAT+AGG - chr4_4:61507147-61507166 Msa0692830:intron 25.0%
! TCAATCAAAAACTTTAAGTC+AGG + chr4_4:61507200-61507219 None:intergenic 25.0%
!!! AAAGTTTTTGATTGATAGGT+TGG - chr4_4:61507205-61507224 Msa0692830:intron 25.0%
!! ACATGTGCATTTTCTTTTAA+AGG - chr4_4:61507346-61507365 Msa0692830:intron 25.0%
!!! ATTTTCTTTTAAAGGACTGA+CGG - chr4_4:61507354-61507373 Msa0692830:intron 25.0%
! TATAATATGCCTTAATCAGT+TGG - chr4_4:61507377-61507396 Msa0692830:intron 25.0%
! AGAATTTGGAAGAGAAATTT+AGG - chr4_4:61507436-61507455 Msa0692830:intron 25.0%
! GAATTTGGAAGAGAAATTTA+GGG - chr4_4:61507437-61507456 Msa0692830:intron 25.0%
!! AAACTAGTGATCCAAATTTT+TGG - chr4_4:61507858-61507877 Msa0692830:CDS 25.0%
! ACGAGTTATGAATGAATATA+AGG - chr4_4:61507900-61507919 Msa0692830:CDS 25.0%
! TCAGTTTATTTAATTGTCTG+TGG - chr4_4:61508017-61508036 Msa0692830:intron 25.0%
!!! TTCAAGTTATTTTCAAGAAC+TGG + chr4_4:61508047-61508066 None:intergenic 25.0%
!!! AAACAAATATGCGTTGATTT+TGG - chr4_4:61508174-61508193 Msa0692830:intron 25.0%
! CATCTATAAAATATCGCAAA+TGG + chr4_4:61508359-61508378 None:intergenic 25.0%
!! ATGGTCAATATATTTTCTGA+AGG - chr4_4:61508457-61508476 Msa0692830:CDS 25.0%
!!! TTGATTTGTCTTTGATGTAT+TGG - chr4_4:61508595-61508614 Msa0692830:intron 25.0%
!!! GTTGATTCTTTATTTTCTCT+GGG - chr4_4:61508732-61508751 Msa0692830:intron 25.0%
GTTCTATAAAGGATGAGATT+TGG + chr4_4:61501132-61501151 None:intergenic 30.0%
! AACTGCAATTCTAGTTGTAT+CGG - chr4_4:61501493-61501512 Msa0692830:intron 30.0%
CTTGATACTGCAATAAAATG+TGG + chr4_4:61501519-61501538 None:intergenic 30.0%
! CACATTTTATTGCAGTATCA+AGG - chr4_4:61501517-61501536 Msa0692830:intron 30.0%
TTTCTACAATTAAAGGACCA+TGG - chr4_4:61501769-61501788 Msa0692830:intron 30.0%
TTCTACAATTAAAGGACCAT+GGG - chr4_4:61501770-61501789 Msa0692830:intron 30.0%
GTAATTATTCGCTTTCTTTG+TGG - chr4_4:61501848-61501867 Msa0692830:intron 30.0%
AAAGTTGAATCATCTTCTGT+AGG + chr4_4:61501980-61501999 None:intergenic 30.0%
TTTCATGTATTACATACCAG+TGG + chr4_4:61502044-61502063 None:intergenic 30.0%
ATAGTTTATGCAGTACATTC+TGG + chr4_4:61502188-61502207 None:intergenic 30.0%
AATATGGAGCGAAAACTTAT+CGG + chr4_4:61502364-61502383 None:intergenic 30.0%
TTGGTATCTTATCTTGCTTA+TGG - chr4_4:61502461-61502480 Msa0692830:intron 30.0%
CTTATCTTGCTTATGGAATA+AGG - chr4_4:61502468-61502487 Msa0692830:intron 30.0%
!! AACACCAATTCATAGTTTTG+AGG - chr4_4:61502508-61502527 Msa0692830:intron 30.0%
!!! ACACCAATTCATAGTTTTGA+GGG - chr4_4:61502509-61502528 Msa0692830:intron 30.0%
GCTGTATATAAATAAGAGGA+AGG + chr4_4:61502598-61502617 None:intergenic 30.0%
CCATGCTGTATATAAATAAG+AGG + chr4_4:61502602-61502621 None:intergenic 30.0%
! CCTCTTATTTATATACAGCA+TGG - chr4_4:61502599-61502618 Msa0692830:intron 30.0%
AATTGTTGAGTTATGACAAC+AGG + chr4_4:61502697-61502716 None:intergenic 30.0%
GAATTGAACATCTTAGTTAC+TGG - chr4_4:61502762-61502781 Msa0692830:intron 30.0%
TGCATACTATATATTCCACA+TGG + chr4_4:61502797-61502816 None:intergenic 30.0%
ATTGAAGGAACTTATCAAGT+GGG - chr4_4:61502886-61502905 Msa0692830:intron 30.0%
GGGAATGACAATTATGTATT+TGG + chr4_4:61503080-61503099 None:intergenic 30.0%
GTCATTGTATACTATCTATC+AGG - chr4_4:61503258-61503277 Msa0692830:intron 30.0%
GTAAGCTACTTAGTTGAAAT+TGG - chr4_4:61503280-61503299 Msa0692830:intron 30.0%
!!! TGTATGTATACCTCCTTTTT+TGG - chr4_4:61503314-61503333 Msa0692830:intron 30.0%
TCAAAAAACAAGGTGAATAC+CGG - chr4_4:61503885-61503904 Msa0692830:intron 30.0%
!! CAAAACTTTAGGAAGTTTTC+CGG + chr4_4:61503907-61503926 None:intergenic 30.0%
! TCAACCAAATATTTCAAGTC+TGG - chr4_4:61503958-61503977 Msa0692830:intron 30.0%
TGTACCAGACTTGAAATATT+TGG + chr4_4:61503965-61503984 None:intergenic 30.0%
ATATGTCAAACACAAAAGGT+TGG + chr4_4:61504064-61504083 None:intergenic 30.0%
CCAAATATGTCAAACACAAA+AGG + chr4_4:61504068-61504087 None:intergenic 30.0%
! CCTTTTGTGTTTGACATATT+TGG - chr4_4:61504065-61504084 Msa0692830:intron 30.0%
AAATCTACTGAAGGAAAACA+AGG + chr4_4:61504212-61504231 None:intergenic 30.0%
TTTGCAAACATTAAACCTGT+TGG + chr4_4:61504475-61504494 None:intergenic 30.0%
! TGCATCTGTAACTGTTATTT+AGG - chr4_4:61504500-61504519 Msa0692830:intron 30.0%
TGTCAAACTCAAAGAAGTTT+AGG + chr4_4:61504678-61504697 None:intergenic 30.0%
! GCTTAAGGTTCTAATATAGT+TGG + chr4_4:61504701-61504720 None:intergenic 30.0%
ATATTAGAACCTTAAGCTGT+TGG - chr4_4:61504704-61504723 Msa0692830:intron 30.0%
TATTAGAACCTTAAGCTGTT+GGG - chr4_4:61504705-61504724 Msa0692830:intron 30.0%
TATGTAACAAGTTCCTTGTT+TGG - chr4_4:61504965-61504984 Msa0692830:intron 30.0%
AATTCAGCAGGAAAAGTTTA+TGG + chr4_4:61505400-61505419 None:intergenic 30.0%
AAGTGAATAAATGTGTGAGT+AGG - chr4_4:61505609-61505628 Msa0692830:intron 30.0%
TGGCATCAACATGAAATTTA+TGG - chr4_4:61505776-61505795 Msa0692830:intron 30.0%
ATAGAGATCTTGACTAAGAT+CGG - chr4_4:61505851-61505870 Msa0692830:intron 30.0%
TCTTGACAACATTGTTCTAT+TGG - chr4_4:61506034-61506053 Msa0692830:intron 30.0%
! GTCGATATCTTTTATAGCAT+CGG - chr4_4:61506068-61506087 Msa0692830:intron 30.0%
GTGTTTGAAAACTTAGCTAT+AGG + chr4_4:61506254-61506273 None:intergenic 30.0%
CCAATCATCAAATAATGTCA+AGG + chr4_4:61506276-61506295 None:intergenic 30.0%
! CCTTGACATTATTTGATGAT+TGG - chr4_4:61506273-61506292 Msa0692830:intron 30.0%
TTAAATACAAGTCCAATGCA+AGG - chr4_4:61506406-61506425 Msa0692830:intron 30.0%
GCATACAACTTGAAAATTAC+AGG + chr4_4:61506642-61506661 None:intergenic 30.0%
CTAAAGCAAAGAAGAAAGAA+AGG + chr4_4:61506681-61506700 None:intergenic 30.0%
! ACATATTCTTTTCTGTGGAA+AGG + chr4_4:61506755-61506774 None:intergenic 30.0%
! TTGCAACATATTCTTTTCTG+TGG + chr4_4:61506760-61506779 None:intergenic 30.0%
!! TGGCTTTAATAAATTACCTC+AGG - chr4_4:61506817-61506836 Msa0692830:intron 30.0%
TGAATAACATATTAGACCTG+AGG + chr4_4:61506836-61506855 None:intergenic 30.0%
GATTTGAGGAATGAGTTTAA+TGG - chr4_4:61506993-61507012 Msa0692830:intron 30.0%
GTCAAATTAGTCCCTAAATT+AGG + chr4_4:61507022-61507041 None:intergenic 30.0%
!!! TTGATAGCAAGGGTATTTTA+AGG - chr4_4:61507102-61507121 Msa0692830:intron 30.0%
! TTGTTGTTCATAGATACAAG+TGG + chr4_4:61507140-61507159 None:intergenic 30.0%
AAGACTCATTGTATCTTATG+TGG - chr4_4:61507228-61507247 Msa0692830:intron 30.0%
CAAAATTCTTTAAGTCACCT+TGG - chr4_4:61507287-61507306 Msa0692830:intron 30.0%
GTACTATTAAGTTAACACCA+AGG + chr4_4:61507307-61507326 None:intergenic 30.0%
GATAGATGTATTGCTGATAA+CGG - chr4_4:61507466-61507485 Msa0692830:intron 30.0%
ATAGATGTATTGCTGATAAC+GGG - chr4_4:61507467-61507486 Msa0692830:intron 30.0%
! TTTTACTCAACATTCCATTG+TGG - chr4_4:61507626-61507645 Msa0692830:CDS 30.0%
TTTACTCAACATTCCATTGT+GGG - chr4_4:61507627-61507646 Msa0692830:CDS 30.0%
TGAGCATGTTACCAAAAATT+TGG + chr4_4:61507872-61507891 None:intergenic 30.0%
! TCAGAAAGAGCTCTATTTTA+TGG - chr4_4:61507978-61507997 Msa0692830:intron 30.0%
ACATGAACTTCTACTTCAAA+GGG + chr4_4:61508093-61508112 None:intergenic 30.0%
AACATGAACTTCTACTTCAA+AGG + chr4_4:61508094-61508113 None:intergenic 30.0%
!!! TTCCTTTATTTTTGACGAAC+CGG + chr4_4:61508155-61508174 None:intergenic 30.0%
!!! GACAGAAAAGGGTTTTATTT+TGG + chr4_4:61508395-61508414 None:intergenic 30.0%
TGAAGATCCAACATAGAAAA+TGG - chr4_4:61508415-61508434 Msa0692830:CDS 30.0%
! TGACCATGAGATTTAAGTTT+GGG + chr4_4:61508444-61508463 None:intergenic 30.0%
! TTGACCATGAGATTTAAGTT+TGG + chr4_4:61508445-61508464 None:intergenic 30.0%
! TTTGATGTATTGGTGTAGTT+TGG - chr4_4:61508605-61508624 Msa0692830:intron 30.0%
! GAATCAAATCGGAAGAATTT+TGG - chr4_4:61508644-61508663 Msa0692830:intron 30.0%
!!! GGTTGATTCTTTATTTTCTC+TGG - chr4_4:61508731-61508750 Msa0692830:intron 30.0%
! ATTTTCAGATTGGCGATTTG+GGG + chr4_4:61500800-61500819 None:intergenic 35.0%
! CATTTTCAGATTGGCGATTT+GGG + chr4_4:61500801-61500820 None:intergenic 35.0%
! ACATTTTCAGATTGGCGATT+TGG + chr4_4:61500802-61500821 None:intergenic 35.0%
TCTGCAAATGAAGACAGTAA+CGG - chr4_4:61501172-61501191 Msa0692830:intron 35.0%
AACGGAGAACTTCATTTCAT+CGG - chr4_4:61501190-61501209 Msa0692830:intron 35.0%
CGAAACATTCTGGTGTATAA+TGG - chr4_4:61501271-61501290 Msa0692830:intron 35.0%
! ACAACGAAGTCTAAAATCAG+AGG + chr4_4:61501312-61501331 None:intergenic 35.0%
TACAACTAGAATTGCAGTTG+CGG + chr4_4:61501492-61501511 None:intergenic 35.0%
ACATCTTACTGCAAACATCA+TGG + chr4_4:61501574-61501593 None:intergenic 35.0%
! TGTTCTTCAGGTGAGATTTT+CGG - chr4_4:61501615-61501634 Msa0692830:intron 35.0%
AAGAGTCTGCATAAGAAACT+CGG + chr4_4:61501673-61501692 None:intergenic 35.0%
AGTTTCTTATGCAGACTCTT+GGG - chr4_4:61501673-61501692 Msa0692830:intron 35.0%
ACTGGTAACTGTGTTAAATG+CGG - chr4_4:61501723-61501742 Msa0692830:intron 35.0%
TTTCTTTGTGGAGTCATAAG+TGG - chr4_4:61501860-61501879 Msa0692830:intron 35.0%
TTCTATTGCAGGATAGTTCA+AGG - chr4_4:61501900-61501919 Msa0692830:CDS 35.0%
AATTGGAATGGAACAACTAC+TGG - chr4_4:61502062-61502081 Msa0692830:intron 35.0%
AATGACAATAGGCTCTATTC+AGG + chr4_4:61502128-61502147 None:intergenic 35.0%
GTACTCGTTATCATTGACAT+TGG - chr4_4:61502208-61502227 Msa0692830:intron 35.0%
! GAAAGTGTATGACTGTTTGT+AGG - chr4_4:61502262-61502281 Msa0692830:intron 35.0%
GGCTATGATCTTAAAGCTAT+GGG + chr4_4:61502412-61502431 None:intergenic 35.0%
! GAATTGGTGTTCTGTAATCA+GGG + chr4_4:61502499-61502518 None:intergenic 35.0%
! TGAATTGGTGTTCTGTAATC+AGG + chr4_4:61502500-61502519 None:intergenic 35.0%
!!! CACCAATTCATAGTTTTGAG+GGG - chr4_4:61502510-61502529 Msa0692830:intron 35.0%
!! AGTGATTTGAGAAAGTGTTG+AGG + chr4_4:61502557-61502576 None:intergenic 35.0%
AAATAAGAGGAAGGGATAGA+GGG + chr4_4:61502589-61502608 None:intergenic 35.0%
TAAATAAGAGGAAGGGATAG+AGG + chr4_4:61502590-61502609 None:intergenic 35.0%
ACTGAGATAGTAAGAGAAGT+AGG + chr4_4:61502625-61502644 None:intergenic 35.0%
GCAGAAAATGAAGCTCATAA+TGG - chr4_4:61502740-61502759 Msa0692830:intron 35.0%
TGGAATATATAGTATGCACG+TGG - chr4_4:61502799-61502818 Msa0692830:intron 35.0%
! TTCGAATTCAAACGGATTTC+TGG - chr4_4:61502826-61502845 Msa0692830:intron 35.0%
!! AATTCAAACGGATTTCTGGT+TGG - chr4_4:61502830-61502849 Msa0692830:intron 35.0%
CATTGAAGGAACTTATCAAG+TGG - chr4_4:61502885-61502904 Msa0692830:intron 35.0%
ATTGTCATTCCCATACATTC+TGG - chr4_4:61503088-61503107 Msa0692830:CDS 35.0%
!! CTAAAGGTACCAGAATGTAT+GGG + chr4_4:61503100-61503119 None:intergenic 35.0%
!! ACTAAAGGTACCAGAATGTA+TGG + chr4_4:61503101-61503120 None:intergenic 35.0%
AATCTCTGTCTTGATTAAGC+AGG - chr4_4:61503160-61503179 Msa0692830:CDS 35.0%
TTGATGTTAGCCAAAAAAGG+AGG + chr4_4:61503327-61503346 None:intergenic 35.0%
CCTTTGATGTTAGCCAAAAA+AGG + chr4_4:61503330-61503349 None:intergenic 35.0%
!!! CCTTTTTTGGCTAACATCAA+AGG - chr4_4:61503327-61503346 Msa0692830:intron 35.0%
TGAAGAAGCTAAATTGACAC+TGG - chr4_4:61503501-61503520 Msa0692830:intron 35.0%
GAAGAAGCTAAATTGACACT+GGG - chr4_4:61503502-61503521 Msa0692830:intron 35.0%
AAGAAGCTAAATTGACACTG+GGG - chr4_4:61503503-61503522 Msa0692830:intron 35.0%
TTGTTGTCGAGTGACTATAA+AGG + chr4_4:61503593-61503612 None:intergenic 35.0%
ATGCAAGTGAATGATAGAGA+TGG - chr4_4:61503687-61503706 Msa0692830:intron 35.0%
ATGGCTAAAAGACAAGACAA+GGG - chr4_4:61503706-61503725 Msa0692830:intron 35.0%
CTCTTTGGATTTGATTGCAT+AGG - chr4_4:61504250-61504269 Msa0692830:intron 35.0%
! TTGCAATTCTTTTCTCTGGT+GGG - chr4_4:61504312-61504331 Msa0692830:intron 35.0%
GAAGGTAACTTGAGCTTATA+GGG + chr4_4:61504399-61504418 None:intergenic 35.0%
AGAAGGTAACTTGAGCTTAT+AGG + chr4_4:61504400-61504419 None:intergenic 35.0%
GTATATGATAATTCTCCCAG+AGG - chr4_4:61504634-61504653 Msa0692830:intron 35.0%
! ATCCAATGGCTTAACCTTTT+GGG + chr4_4:61504924-61504943 None:intergenic 35.0%
! AATCCAATGGCTTAACCTTT+TGG + chr4_4:61504925-61504944 None:intergenic 35.0%
TTGAATCACCTAAAGTAGAC+TGG - chr4_4:61504990-61505009 Msa0692830:intron 35.0%
TAGAGATTCGACTCATCTAA+AGG + chr4_4:61505052-61505071 None:intergenic 35.0%
! CTACTTACTGTAAGCTTTGA+TGG - chr4_4:61505102-61505121 Msa0692830:intron 35.0%
TATGCATCTTAGAATTCAGC+AGG + chr4_4:61505412-61505431 None:intergenic 35.0%
!! ATTGTTAGAGGCATTGAAAG+TGG - chr4_4:61505440-61505459 Msa0692830:intron 35.0%
TGAATAAATGTGTGAGTAGG+CGG - chr4_4:61505612-61505631 Msa0692830:intron 35.0%
TAGAGATCTTGACTAAGATC+GGG - chr4_4:61505852-61505871 Msa0692830:intron 35.0%
TACTACCCAAGTAATTACGA+AGG + chr4_4:61505943-61505962 None:intergenic 35.0%
ATCGATATCTTGACTTAGAC+TGG + chr4_4:61506015-61506034 None:intergenic 35.0%
AGGATTGATTAGTACCATGT+AGG + chr4_4:61506219-61506238 None:intergenic 35.0%
!! TGGTTTGCACATATCTTTTC+AGG - chr4_4:61506293-61506312 Msa0692830:intron 35.0%
!! TCTTTTCAGGACCTTAACAT+TGG - chr4_4:61506306-61506325 Msa0692830:CDS 35.0%
ATAATGATGACACTCATGCA+CGG - chr4_4:61506382-61506401 Msa0692830:intron 35.0%
!!! CATAGAACAAGTTTTAGACG+AGG - chr4_4:61506480-61506499 Msa0692830:intron 35.0%
! TTTCCTTTTGTCCATTAGCT+TGG - chr4_4:61506614-61506633 Msa0692830:CDS 35.0%
!! TTCCTTTTGTCCATTAGCTT+GGG - chr4_4:61506615-61506634 Msa0692830:CDS 35.0%
TTTCTTCTTTGCTTTAGCTG+TGG - chr4_4:61506684-61506703 Msa0692830:CDS 35.0%
ACCATACAGCTTACAATCTA+TGG - chr4_4:61506797-61506816 Msa0692830:CDS 35.0%
AGTAATGATGTGTGTAGCTT+TGG + chr4_4:61506905-61506924 None:intergenic 35.0%
AAATGTCAGTCTTCCTTTGT+TGG - chr4_4:61506971-61506990 Msa0692830:intron 35.0%
TCATTCCTCAAATCCAACAA+AGG + chr4_4:61506987-61507006 None:intergenic 35.0%
! AGATACAAGTGGTGTCAATT+GGG + chr4_4:61507129-61507148 None:intergenic 35.0%
! TAGATACAAGTGGTGTCAAT+TGG + chr4_4:61507130-61507149 None:intergenic 35.0%
AACTCGACATGCAAAGAATT+TGG - chr4_4:61507422-61507441 Msa0692830:intron 35.0%
TTAGGCTAGATTTCCATTCT+TGG - chr4_4:61507585-61507604 Msa0692830:CDS 35.0%
TAGATTTCCATTCTTGGATG+AGG - chr4_4:61507591-61507610 Msa0692830:CDS 35.0%
ATAACATCCTCATCCAAGAA+TGG + chr4_4:61507601-61507620 None:intergenic 35.0%
TCTTGGATGAGGATGTTATA+AGG - chr4_4:61507602-61507621 Msa0692830:CDS 35.0%
CTTGGATGAGGATGTTATAA+GGG - chr4_4:61507603-61507622 Msa0692830:CDS 35.0%
! AGGTATTGTTATTGACTGAG+TGG - chr4_4:61507704-61507723 Msa0692830:intron 35.0%
CATCTTGTCTGACCATTTAT+TGG - chr4_4:61507772-61507791 Msa0692830:CDS 35.0%
! GAAAGAGCTCTATTTTATGG+CGG - chr4_4:61507981-61508000 Msa0692830:intron 35.0%
! AAAGAGCTCTATTTTATGGC+GGG - chr4_4:61507982-61508001 Msa0692830:intron 35.0%
CATGAACTTCTACTTCAAAG+GGG + chr4_4:61508092-61508111 None:intergenic 35.0%
AGATCACTGTTTCACTCATT+AGG - chr4_4:61508235-61508254 Msa0692830:intron 35.0%
TTTCACTCATTAGGATGAAG+AGG - chr4_4:61508244-61508263 Msa0692830:intron 35.0%
AAAATATCGCAAATGGTCCA+TGG + chr4_4:61508352-61508371 None:intergenic 35.0%
TTGGATCTTCAGACAGAAAA+GGG + chr4_4:61508406-61508425 None:intergenic 35.0%
ACTCCCAAACTTAAATCTCA+TGG - chr4_4:61508438-61508457 Msa0692830:CDS 35.0%
!! TTTATTTTCTCTGGGCATGT+GGG - chr4_4:61508740-61508759 Msa0692830:intron 35.0%
GTTAATTCGAATGCCTGAGA+CGG + chr4_4:61500749-61500768 None:intergenic 40.0%
!! CATTCAATCAGAAGTGTCTG+AGG + chr4_4:61500837-61500856 None:intergenic 40.0%
GTGTTGTCTCAGTGTTTCAT+AGG - chr4_4:61500930-61500949 Msa0692830:CDS 40.0%
CGTTTCGTCGTGTTCTATAA+AGG + chr4_4:61501143-61501162 None:intergenic 40.0%
!! TTTCGAGAAGCATCCACTAA+AGG + chr4_4:61501256-61501275 None:intergenic 40.0%
GAGTTTCTTATGCAGACTCT+TGG - chr4_4:61501672-61501691 Msa0692830:intron 40.0%
! TCCTGTGGTTCTTATTTGAC+TGG - chr4_4:61501705-61501724 Msa0692830:intron 40.0%
ACCAGTCAAATAAGAACCAC+AGG + chr4_4:61501709-61501728 None:intergenic 40.0%
CTGGTAACTGTGTTAAATGC+GGG - chr4_4:61501724-61501743 Msa0692830:intron 40.0%
AACTGTGTTAAATGCGGGAA+AGG - chr4_4:61501729-61501748 Msa0692830:intron 40.0%
GAACACAGAAACTTACCACT+TGG + chr4_4:61501819-61501838 None:intergenic 40.0%
CTCGTTATCATTGACATTGG+TGG - chr4_4:61502211-61502230 Msa0692830:intron 40.0%
GGGCTATGATCTTAAAGCTA+TGG + chr4_4:61502413-61502432 None:intergenic 40.0%
GACCCCTCAAAACTATGAAT+TGG + chr4_4:61502515-61502534 None:intergenic 40.0%
GTGGATGCTTCGAATTCAAA+CGG - chr4_4:61502818-61502837 Msa0692830:intron 40.0%
! ATCCTGCCCTAAGTTTTCTA+GGG - chr4_4:61502949-61502968 Msa0692830:intron 40.0%
TAGTAATAACCTGCTTCGCA+TGG + chr4_4:61503013-61503032 None:intergenic 40.0%
CAACTTCAACTGTTGCATCA+TGG - chr4_4:61503610-61503629 Msa0692830:intron 40.0%
GATGGCTAAAAGACAAGACA+AGG - chr4_4:61503705-61503724 Msa0692830:intron 40.0%
TGGCTAAAAGACAAGACAAG+GGG - chr4_4:61503707-61503726 Msa0692830:intron 40.0%
TACTGAAGGAAAACAAGGTC+AGG + chr4_4:61504207-61504226 None:intergenic 40.0%
ATTGCATAGGCTGTGATATC+TGG - chr4_4:61504263-61504282 Msa0692830:intron 40.0%
CCAGAGAAAAGAATTGCAAC+AGG + chr4_4:61504311-61504330 None:intergenic 40.0%
! CCTGTTGCAATTCTTTTCTC+TGG - chr4_4:61504308-61504327 Msa0692830:intron 40.0%
! GTTGCAATTCTTTTCTCTGG+TGG - chr4_4:61504311-61504330 Msa0692830:intron 40.0%
GCTGGATTCTATGATACTTG+CGG - chr4_4:61504334-61504353 Msa0692830:intron 40.0%
TATGATACTTGCGGCATTAC+TGG - chr4_4:61504343-61504362 Msa0692830:intron 40.0%
!! GGAATGGTTGATTTTCGACA+TGG + chr4_4:61504899-61504918 None:intergenic 40.0%
ATCAACCATTCCATCCCAAA+AGG - chr4_4:61504907-61504926 Msa0692830:intron 40.0%
!!! CTTAACCTTTTGGGATGGAA+TGG + chr4_4:61504915-61504934 None:intergenic 40.0%
!! AATGGCTTAACCTTTTGGGA+TGG + chr4_4:61504920-61504939 None:intergenic 40.0%
ATCCCAAAAGGTTAAGCCAT+TGG - chr4_4:61504919-61504938 Msa0692830:intron 40.0%
AGGTGATTCAACACCAAACA+AGG + chr4_4:61504981-61505000 None:intergenic 40.0%
TCCTGATAGAAAATCTGCCA+AGG - chr4_4:61505134-61505153 Msa0692830:intron 40.0%
ATAGAAAATCTGCCAAGGCA+GGG - chr4_4:61505139-61505158 Msa0692830:intron 40.0%
GAATAAATGTGTGAGTAGGC+GGG - chr4_4:61505613-61505632 Msa0692830:intron 40.0%
!! GTTTGCAAAGCACTGAATGA+AGG + chr4_4:61505696-61505715 None:intergenic 40.0%
TAGCAAGACTGCAAAACGTA+AGG + chr4_4:61505907-61505926 None:intergenic 40.0%
CCAAGTAATTACGAAGGATC+GGG + chr4_4:61505937-61505956 None:intergenic 40.0%
CCCAAGTAATTACGAAGGAT+CGG + chr4_4:61505938-61505957 None:intergenic 40.0%
CCGATCCTTCGTAATTACTT+GGG - chr4_4:61505935-61505954 Msa0692830:intron 40.0%
! AAAGCATCTGTTGAAAGTGC+AGG - chr4_4:61506108-61506127 Msa0692830:intron 40.0%
!! TGATGCTGACTTGTCAGATT+TGG - chr4_4:61506148-61506167 Msa0692830:intron 40.0%
AAATCCTTCCAACACCTACA+TGG - chr4_4:61506202-61506221 Msa0692830:intron 40.0%
GATTAGTACCATGTAGGTGT+TGG + chr4_4:61506213-61506232 None:intergenic 40.0%
! GCTATAGGCTTTTCAATCTG+AGG + chr4_4:61506239-61506258 None:intergenic 40.0%
AACAAGGAGAATCCTTGCAT+TGG + chr4_4:61506421-61506440 None:intergenic 40.0%
AATGCAAGGATTCTCCTTGT+TGG - chr4_4:61506420-61506439 Msa0692830:intron 40.0%
!! ATGAACAGTGTGCTGGTTAT+GGG - chr4_4:61506454-61506473 Msa0692830:intron 40.0%
!!! GAACAAGTTTTAGACGAGGA+AGG - chr4_4:61506484-61506503 Msa0692830:intron 40.0%
!! CGAGGAAGGTATTATCACTA+TGG - chr4_4:61506498-61506517 Msa0692830:intron 40.0%
AATTACAGGACCCAAGCTAA+TGG + chr4_4:61506628-61506647 None:intergenic 40.0%
GCCATAGATTGTAAGCTGTA+TGG + chr4_4:61506801-61506820 None:intergenic 40.0%
!! TAGCTTTGGACGAGAAATCA+GGG + chr4_4:61506891-61506910 None:intergenic 40.0%
GTCTTCCTTTGTTGGATTTG+AGG - chr4_4:61506979-61506998 Msa0692830:intron 40.0%
ACGAGAGTTTCCATGATTGA+GGG - chr4_4:61507040-61507059 Msa0692830:intron 40.0%
TCAATTAAGCCCCTCAATCA+TGG + chr4_4:61507053-61507072 None:intergenic 40.0%
ATATGCCTTAATCAGTTGGC+TGG - chr4_4:61507381-61507400 Msa0692830:intron 40.0%
TATGCCTTAATCAGTTGGCT+GGG - chr4_4:61507382-61507401 Msa0692830:intron 40.0%
!! ATGTATTGCTGATAACGGGA+AGG - chr4_4:61507471-61507490 Msa0692830:intron 40.0%
! TTTTTATCACCGATGCCACT+AGG + chr4_4:61507673-61507692 None:intergenic 40.0%
TTGTCGAGTCAGCCAATAAA+TGG + chr4_4:61507787-61507806 None:intergenic 40.0%
CACAAGTATGAGTTCAGTTC+AGG + chr4_4:61507946-61507965 None:intergenic 40.0%
TTCTTCCATGTTCTCATGAG+AGG - chr4_4:61508112-61508131 Msa0692830:intron 40.0%
!! TGCCGGTTCGTCAAAAATAA+AGG - chr4_4:61508150-61508169 Msa0692830:intron 40.0%
TGATCTGATTGGTACGAGTT+TGG + chr4_4:61508221-61508240 None:intergenic 40.0%
GAGTGAAACAGTGATCTGAT+TGG + chr4_4:61508232-61508251 None:intergenic 40.0%
CATGGTACATCGGTATTTGT+CGG + chr4_4:61508287-61508306 None:intergenic 40.0%
AACAACGACTCATGGTACAT+CGG + chr4_4:61508297-61508316 None:intergenic 40.0%
!!! TTCTGGTGATTTTCAAGTGC+CGG - chr4_4:61508322-61508341 Msa0692830:CDS 40.0%
GTTGGATCTTCAGACAGAAA+AGG + chr4_4:61508407-61508426 None:intergenic 40.0%
! TGGGAGTCCATTTTCTATGT+TGG + chr4_4:61508425-61508444 None:intergenic 40.0%
GCTTGGTTTATATGAAGCAG+CGG - chr4_4:61508490-61508509 Msa0692830:CDS 40.0%
!! AGTTTGGTTCTAGAATTGCG+AGG - chr4_4:61508621-61508640 Msa0692830:intron 40.0%
!! GTTTGGTTCTAGAATTGCGA+GGG - chr4_4:61508622-61508641 Msa0692830:intron 40.0%
GAATTGCGAGGGAATCAAAT+CGG - chr4_4:61508633-61508652 Msa0692830:intron 40.0%
AAGTAATCGAGCAGCAAATC+AGG - chr4_4:61508667-61508686 Msa0692830:intron 40.0%
!!! CTTTATTTTCTCTGGGCATG+TGG - chr4_4:61508739-61508758 Msa0692830:intron 40.0%
TTGGGGAAGTTGAGTGGAAT+GGG + chr4_4:61500783-61500802 None:intergenic 45.0%
TTTGGGGAAGTTGAGTGGAA+TGG + chr4_4:61500784-61500803 None:intergenic 45.0%
!! CTTATTGTCGGTGTCGTATC+CGG - chr4_4:61500902-61500921 Msa0692830:CDS 45.0%
ATGACCTGAAAGAAGCTCTG+CGG - chr4_4:61501050-61501069 Msa0692830:CDS 45.0%
AGAAGAGGTCCTGATAGCTT+GGG - chr4_4:61501073-61501092 Msa0692830:CDS 45.0%
TTCTTCACACCCAAGCTATC+AGG + chr4_4:61501085-61501104 None:intergenic 45.0%
TCCACTAAAGGCTGAACAAG+CGG + chr4_4:61501244-61501263 None:intergenic 45.0%
GGATGCTTCTCGAAACATTC+TGG - chr4_4:61501261-61501280 Msa0692830:intron 45.0%
CTAAAATCAGAGGCAGTTGC+AGG + chr4_4:61501302-61501321 None:intergenic 45.0%
! TCTTCAGGTGAGATTTTCGG+AGG - chr4_4:61501618-61501637 Msa0692830:intron 45.0%
! GACCATGGGCTATCATCTAT+TGG - chr4_4:61501784-61501803 Msa0692830:intron 45.0%
TGCCAATAGATGATAGCCCA+TGG + chr4_4:61501789-61501808 None:intergenic 45.0%
! ATGGGCTATCATCTATTGGC+AGG - chr4_4:61501788-61501807 Msa0692830:intron 45.0%
TATTGGCAGGTAACTCCAAG+TGG - chr4_4:61501801-61501820 Msa0692830:intron 45.0%
AGGATAGTTCAAGGACCCTT+TGG - chr4_4:61501909-61501928 Msa0692830:CDS 45.0%
AGTTCAAGGACCCTTTGGTT+TGG - chr4_4:61501914-61501933 Msa0692830:CDS 45.0%
ATGGAGCGAAAACTTATCGG+TGG + chr4_4:61502361-61502380 None:intergenic 45.0%
! CCACTAGCCTACTAGTTGAT+GGG - chr4_4:61502435-61502454 Msa0692830:intron 45.0%
CCAAGTTCCCATCAACTAGT+AGG + chr4_4:61502445-61502464 None:intergenic 45.0%
!! CCTACTAGTTGATGGGAACT+TGG - chr4_4:61502442-61502461 Msa0692830:intron 45.0%
TGACAACAGGTCTATTCGCT+GGG + chr4_4:61502684-61502703 None:intergenic 45.0%
ATGACAACAGGTCTATTCGC+TGG + chr4_4:61502685-61502704 None:intergenic 45.0%
! CATCCTGCCCTAAGTTTTCT+AGG - chr4_4:61502948-61502967 Msa0692830:intron 45.0%
! TCCTGCCCTAAGTTTTCTAG+GGG - chr4_4:61502950-61502969 Msa0692830:intron 45.0%
GTTGCCCCCTAGAAAACTTA+GGG + chr4_4:61502958-61502977 None:intergenic 45.0%
TGTTGCCCCCTAGAAAACTT+AGG + chr4_4:61502959-61502978 None:intergenic 45.0%
AGCAACATATGAGCTCGCAT+TGG + chr4_4:61503205-61503224 None:intergenic 45.0%
CAAGTTTGAGTCGTGGAATC+AGG + chr4_4:61503559-61503578 None:intergenic 45.0%
CGAGTGACTATAAAGGTGAC+AGG + chr4_4:61503586-61503605 None:intergenic 45.0%
GGCTAAAAGACAAGACAAGG+GGG - chr4_4:61503708-61503727 Msa0692830:intron 45.0%
!! AATTCTTTTCTCTGGTGGGC+TGG - chr4_4:61504316-61504335 Msa0692830:intron 45.0%
!! TATAGGGAGCACTCACAACT+GGG + chr4_4:61504383-61504402 None:intergenic 45.0%
!! TTATAGGGAGCACTCACAAC+TGG + chr4_4:61504384-61504403 None:intergenic 45.0%
GTCATGAACTAACTGCCAAC+AGG - chr4_4:61504457-61504476 Msa0692830:CDS 45.0%
GAAACTGTGTGTTCTCCTCT+GGG + chr4_4:61504652-61504671 None:intergenic 45.0%
TGAAACTGTGTGTTCTCCTC+TGG + chr4_4:61504653-61504672 None:intergenic 45.0%
CAAAGAGCTCTTGTGTAAGG+GGG + chr4_4:61504763-61504782 None:intergenic 45.0%
CCAAAGAGCTCTTGTGTAAG+GGG + chr4_4:61504764-61504783 None:intergenic 45.0%
CCCAAAGAGCTCTTGTGTAA+GGG + chr4_4:61504765-61504784 None:intergenic 45.0%
CCCTTACACAAGAGCTCTTT+GGG - chr4_4:61504762-61504781 Msa0692830:intron 45.0%
GGATCAAATTCTAGACCACG+TGG - chr4_4:61504848-61504867 Msa0692830:intron 45.0%
GAACTCGACCAGTCTACTTT+AGG + chr4_4:61505001-61505020 None:intergenic 45.0%
! GCCTTGGCAGATTTTCTATC+AGG + chr4_4:61505138-61505157 None:intergenic 45.0%
GATAGAAAATCTGCCAAGGC+AGG - chr4_4:61505138-61505157 Msa0692830:intron 45.0%
TAGTTCTTTCAACCCTGCCT+TGG + chr4_4:61505154-61505173 None:intergenic 45.0%
AAAGAGTTGCACCGTCAAGA+CGG - chr4_4:61505175-61505194 Msa0692830:intron 45.0%
TGGATTGCATACCGTCTTGA+CGG + chr4_4:61505189-61505208 None:intergenic 45.0%
TCTTGACTAAGATCGGGAGA+AGG - chr4_4:61505858-61505877 Msa0692830:intron 45.0%
GTAGCAAGATCGCAACATGT+AGG - chr4_4:61505880-61505899 Msa0692830:intron 45.0%
AGTAATTACGAAGGATCGGG+AGG + chr4_4:61505934-61505953 None:intergenic 45.0%
CCCGATCCTTCGTAATTACT+TGG - chr4_4:61505934-61505953 Msa0692830:intron 45.0%
CAACATGTGAGGTCGTAACT+AGG + chr4_4:61505974-61505993 None:intergenic 45.0%
TAGCAAGATCGCAACATGTG+AGG + chr4_4:61505985-61506004 None:intergenic 45.0%
TCTTGACTTAGACTGGAAGC+AGG + chr4_4:61506008-61506027 None:intergenic 45.0%
!! TAGCATCGGTCATGTTCAGT+TGG - chr4_4:61506082-61506101 Msa0692830:intron 45.0%
!! AGTACCATGTAGGTGTTGGA+AGG + chr4_4:61506209-61506228 None:intergenic 45.0%
!! ATAGCTTTATGGCTCGCTTC+TGG - chr4_4:61506330-61506349 Msa0692830:CDS 45.0%
!! AGGATTCTCCTTGTTGGTTC+TGG - chr4_4:61506426-61506445 Msa0692830:intron 45.0%
!! GATGAACAGTGTGCTGGTTA+TGG - chr4_4:61506453-61506472 Msa0692830:intron 45.0%
! GACCCAAGCTAATGGACAAA+AGG + chr4_4:61506620-61506639 None:intergenic 45.0%
!! AGCTTTGGACGAGAAATCAG+GGG + chr4_4:61506890-61506909 None:intergenic 45.0%
!! GTAGCTTTGGACGAGAAATC+AGG + chr4_4:61506892-61506911 None:intergenic 45.0%
GACGAGAGTTTCCATGATTG+AGG - chr4_4:61507039-61507058 Msa0692830:intron 45.0%
CGAGAGTTTCCATGATTGAG+GGG - chr4_4:61507041-61507060 Msa0692830:intron 45.0%
ATGCCTTAATCAGTTGGCTG+GGG - chr4_4:61507383-61507402 Msa0692830:intron 45.0%
!! TATTGCTGATAACGGGAAGG+AGG - chr4_4:61507474-61507493 Msa0692830:intron 45.0%
ACTCAACATTCCATTGTGGG+AGG - chr4_4:61507630-61507649 Msa0692830:CDS 45.0%
CTTGATCAACCTAGTGGCAT+CGG - chr4_4:61507661-61507680 Msa0692830:intron 45.0%
TTCAGTTCAGGCAACATCAC+TGG + chr4_4:61507934-61507953 None:intergenic 45.0%
!!! TTTTATGGCGGGTTCTACTG+TGG - chr4_4:61507993-61508012 Msa0692830:intron 45.0%
TTGTCGGAAGTAGAAGTTCG+CGG + chr4_4:61508271-61508290 None:intergenic 45.0%
GATGTACCATGAGTCGTTGT+TGG - chr4_4:61508296-61508315 Msa0692830:CDS 45.0%
GAAACTCCAACAACGACTCA+TGG + chr4_4:61508305-61508324 None:intergenic 45.0%
TGAGTCGTTGTTGGAGTTTC+TGG - chr4_4:61508305-61508324 Msa0692830:CDS 45.0%
CTGAAGGTTGCACAATTGCT+TGG - chr4_4:61508473-61508492 Msa0692830:CDS 45.0%
!!! AAAGTTTTGGAGTGCACACC+TGG + chr4_4:61508535-61508554 None:intergenic 45.0%
CAGGCAGTGTAAGGATTTGT+AGG - chr4_4:61508696-61508715 Msa0692830:intron 45.0%
! GCATGTGGGACTCATCTTTT+TGG - chr4_4:61508754-61508773 Msa0692830:intron 45.0%
!! TAAATAAATAAATCAATAAA+TGG + chr4_4:61503056-61503075 None:intergenic 5.0%
!!! ATATTGAATTTTATTTTTTT+TGG - chr4_4:61505371-61505390 Msa0692830:intron 5.0%
!!! AAATTTTTTTATATATGAAT+TGG - chr4_4:61508802-61508821 Msa0692830:CDS 5.0%
! GGAATTGCATTGACCGTCTC+AGG - chr4_4:61500733-61500752 Msa0692830:three_prime_UTR 50.0%
AGTTGAGTGGAATGGGAGAG+AGG + chr4_4:61500776-61500795 None:intergenic 50.0%
CACTGAGACAACACAGACAC+CGG + chr4_4:61500924-61500943 None:intergenic 50.0%
TTCTCCGCAGAGCTTCTTTC+AGG + chr4_4:61501057-61501076 None:intergenic 50.0%
AAAGAAGCTCTGCGGAGAAG+AGG - chr4_4:61501058-61501077 Msa0692830:CDS 50.0%
GAGAAGAGGTCCTGATAGCT+TGG - chr4_4:61501072-61501091 Msa0692830:CDS 50.0%
TCGGTGCAACTTTGCAGCTT+AGG - chr4_4:61501209-61501228 Msa0692830:intron 50.0%
CGGTGCAACTTTGCAGCTTA+GGG - chr4_4:61501210-61501229 Msa0692830:intron 50.0%
GGTGCAACTTTGCAGCTTAG+GGG - chr4_4:61501211-61501230 Msa0692830:intron 50.0%
TCCGCTTGTTCAGCCTTTAG+TGG - chr4_4:61501240-61501259 Msa0692830:intron 50.0%
CTTGGGAATTGTTGCTCCTG+TGG - chr4_4:61501690-61501709 Msa0692830:intron 50.0%
TGCATCTCGGCCAAACCAAA+GGG + chr4_4:61501927-61501946 None:intergenic 50.0%
ATGCATCTCGGCCAAACCAA+AGG + chr4_4:61501928-61501947 None:intergenic 50.0%
! TGGTTTGGCCGAGATGCATT+TGG - chr4_4:61501929-61501948 Msa0692830:CDS 50.0%
TTGGCCGAGATGCATTTGGT+AGG - chr4_4:61501933-61501952 Msa0692830:CDS 50.0%
TCCGCCTACCAAATGCATCT+CGG + chr4_4:61501940-61501959 None:intergenic 50.0%
CTGTAGGCCAGTGAACAAGA+AGG + chr4_4:61501964-61501983 None:intergenic 50.0%
CTACTGGTGTCTTGCTCTGA+TGG - chr4_4:61502078-61502097 Msa0692830:intron 50.0%
CAACTAGTAGGCTAGTGGCA+GGG + chr4_4:61502433-61502452 None:intergenic 50.0%
TCAACTAGTAGGCTAGTGGC+AGG + chr4_4:61502434-61502453 None:intergenic 50.0%
! GCCACTAGCCTACTAGTTGA+TGG - chr4_4:61502434-61502453 Msa0692830:intron 50.0%
CCCATCAACTAGTAGGCTAG+TGG + chr4_4:61502438-61502457 None:intergenic 50.0%
! AGTGTTGAGGCCTTAGAGCA+GGG + chr4_4:61502544-61502563 None:intergenic 50.0%
!! AAGTGTTGAGGCCTTAGAGC+AGG + chr4_4:61502545-61502564 None:intergenic 50.0%
ACAACAGGTCTATTCGCTGG+GGG + chr4_4:61502682-61502701 None:intergenic 50.0%
GACAACAGGTCTATTCGCTG+GGG + chr4_4:61502683-61502702 None:intergenic 50.0%
TACTGGGAAGAGCTACCATG+TGG - chr4_4:61502779-61502798 Msa0692830:intron 50.0%
! GTCTGCAGGTTTTCAGAGCT+TGG + chr4_4:61502929-61502948 None:intergenic 50.0%
! CCTGCCCTAAGTTTTCTAGG+GGG - chr4_4:61502951-61502970 Msa0692830:intron 50.0%
AGGCTCACAAGTTTGAGTCG+TGG + chr4_4:61503566-61503585 None:intergenic 50.0%
!! AAGACAAGGGGGTATTGCAC+AGG - chr4_4:61503719-61503738 Msa0692830:intron 50.0%
! GGGTATTGCACAGGAACGAT+GGG - chr4_4:61503728-61503747 Msa0692830:intron 50.0%
GGCATTACTGGATCAATGCC+TGG - chr4_4:61504355-61504374 Msa0692830:intron 50.0%
GTGCTTCACCCAACAGCTTA+AGG + chr4_4:61504716-61504735 None:intergenic 50.0%
CCCCTTACACAAGAGCTCTT+TGG - chr4_4:61504761-61504780 Msa0692830:intron 50.0%
GCCCAAAGAGCTCTTGTGTA+AGG + chr4_4:61504766-61504785 None:intergenic 50.0%
TTCTAGACCACGTGGTCAAC+TGG - chr4_4:61504856-61504875 Msa0692830:intron 50.0%
TCTATGACCAGTTGACCACG+TGG + chr4_4:61504866-61504885 None:intergenic 50.0%
ACGTGGTCAACTGGTCATAG+AGG - chr4_4:61504865-61504884 Msa0692830:intron 50.0%
AATTACGAAGGATCGGGAGG+CGG + chr4_4:61505931-61505950 None:intergenic 50.0%
! GCATCTGTTGAAAGTGCAGG+TGG - chr4_4:61506111-61506130 Msa0692830:intron 50.0%
CATCAGCACCAGAACCAACA+AGG + chr4_4:61506437-61506456 None:intergenic 50.0%
TAGCCCCAGCCAACTGATTA+AGG + chr4_4:61507389-61507408 None:intergenic 50.0%
GCCAACCTTGATCAACCTAG+TGG - chr4_4:61507655-61507674 Msa0692830:intron 50.0%
!! GCCACTAGGTTGATCAAGGT+TGG + chr4_4:61507659-61507678 None:intergenic 50.0%
!! CGATGCCACTAGGTTGATCA+AGG + chr4_4:61507663-61507682 None:intergenic 50.0%
GGGGTGACATAGTTCATCGT+TGG + chr4_4:61508073-61508092 None:intergenic 50.0%
CAACGCCTCTCATGAGAACA+TGG + chr4_4:61508120-61508139 None:intergenic 50.0%
!! ATGAGAGGCGTTGACCTGAT+CGG - chr4_4:61508127-61508146 Msa0692830:intron 50.0%
!! TTTCAAGTGCCGGTACACCA+TGG - chr4_4:61508332-61508351 Msa0692830:CDS 50.0%
GCAAATGGTCCATGGTGTAC+CGG + chr4_4:61508344-61508363 None:intergenic 50.0%
! GGCGATTTGGGGAAGTTGAG+TGG + chr4_4:61500789-61500808 None:intergenic 55.0%
GCCGAGATGCATTTGGTAGG+CGG - chr4_4:61501936-61501955 Msa0692830:CDS 55.0%
ATACCAGTGGCCTGCTGATC+TGG + chr4_4:61502031-61502050 None:intergenic 55.0%
GTGTTGAGGCCTTAGAGCAG+GGG + chr4_4:61502543-61502562 None:intergenic 55.0%
ATTCGCTGGGGGAGTTAGAG+TGG + chr4_4:61502671-61502690 None:intergenic 55.0%
ACTTAGGGCAGGATGTCTGC+AGG + chr4_4:61502943-61502962 None:intergenic 55.0%
CCCCCTAGAAAACTTAGGGC+AGG + chr4_4:61502954-61502973 None:intergenic 55.0%
GAGACAGTTCCATGCGAAGC+AGG - chr4_4:61503001-61503020 Msa0692830:intron 55.0%
!! GGGGTATTGCACAGGAACGA+TGG - chr4_4:61503727-61503746 Msa0692830:intron 55.0%
TGCACAGGAACGATGGGAAG+TGG - chr4_4:61503734-61503753 Msa0692830:intron 55.0%
AGCACTCACAACTGGGATCC+AGG + chr4_4:61504376-61504395 None:intergenic 55.0%
ATTACGAAGGATCGGGAGGC+GGG + chr4_4:61505930-61505949 None:intergenic 55.0%
AAAGTGCAGGTGGAGACTCG+TGG - chr4_4:61506121-61506140 Msa0692830:intron 55.0%
GCTTTATGGCTCGCTTCTGG+TGG - chr4_4:61506333-61506352 Msa0692830:CDS 55.0%
!! TCGCTTCTGGTGGTGATGGA+TGG - chr4_4:61506343-61506362 Msa0692830:CDS 55.0%
!! CGCTTCTGGTGGTGATGGAT+GGG - chr4_4:61506344-61506363 Msa0692830:CDS 55.0%
!! GGTGCTGATGAACAGTGTGC+TGG - chr4_4:61506447-61506466 Msa0692830:intron 55.0%
AGGTTGGCAACCTCCCACAA+TGG + chr4_4:61507643-61507662 None:intergenic 55.0%
AAGCAGCGGTTCTTCCCAAG+CGG - chr4_4:61508504-61508523 Msa0692830:CDS 55.0%
GGCGGAGCCTTCTTGTTCAC+TGG - chr4_4:61501954-61501973 Msa0692830:CDS 60.0%
GCCAGTTGCTCCAGATCAGC+AGG - chr4_4:61502018-61502037 Msa0692830:intron 60.0%
! GCCTGCTGATCTGGAGCAAC+TGG + chr4_4:61502022-61502041 None:intergenic 60.0%
! TGGCTCGCTTCTGGTGGTGA+TGG - chr4_4:61506339-61506358 Msa0692830:CDS 60.0%
CAGTTGGCTGGGGCTAGATG+AGG - chr4_4:61507393-61507412 Msa0692830:intron 60.0%
!! TTGACGAACCGGCACCGATC+AGG + chr4_4:61508144-61508163 None:intergenic 60.0%
AGCAGCGGTTCTTCCCAAGC+GGG - chr4_4:61508505-61508524 Msa0692830:CDS 60.0%
TCTTCCCAAGCGGGCAATCC+AGG - chr4_4:61508514-61508533 Msa0692830:CDS 60.0%
CACACCTGGATTGCCCGCTT+GGG + chr4_4:61508521-61508540 None:intergenic 60.0%
GCAGCAAATCAGGCGTCTGC+AGG - chr4_4:61508677-61508696 Msa0692830:intron 60.0%
AGGCGTCTGCAGGCAGTGTA+AGG - chr4_4:61508687-61508706 Msa0692830:intron 60.0%
GCTCCAGATCAGCAGGCCAC+TGG - chr4_4:61502025-61502044 Msa0692830:intron 65.0%
GGTCGCTCACCCCTGCTCTA+AGG - chr4_4:61502531-61502550 Msa0692830:intron 65.0%
!! GGCGTTGACCTGATCGGTGC+CGG - chr4_4:61508133-61508152 Msa0692830:intron 65.0%
GCACACCTGGATTGCCCGCT+TGG + chr4_4:61508522-61508541 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61500716 61508863 61500716 ID=Msa0692830;Name=Msa0692830
chr4_4 mRNA 61500716 61508863 61500716 ID=Msa0692830-mRNA-1;Parent=Msa0692830;Name=Msa0692830-mRNA-1;_AED=0.10;_eAED=0.10;_QI=11|0.85|0.8|1|0.85|0.8|15|127|641
chr4_4 exon 61500716 61500956 61500716 ID=Msa0692830-mRNA-1:exon:17084;Parent=Msa0692830-mRNA-1
chr4_4 exon 61501044 61501100 61501044 ID=Msa0692830-mRNA-1:exon:17083;Parent=Msa0692830-mRNA-1
chr4_4 exon 61501874 61501990 61501874 ID=Msa0692830-mRNA-1:exon:17082;Parent=Msa0692830-mRNA-1
chr4_4 exon 61502084 61502183 61502084 ID=Msa0692830-mRNA-1:exon:17081;Parent=Msa0692830-mRNA-1
chr4_4 exon 61503074 61503264 61503074 ID=Msa0692830-mRNA-1:exon:17080;Parent=Msa0692830-mRNA-1
chr4_4 exon 61503356 61503449 61503356 ID=Msa0692830-mRNA-1:exon:17079;Parent=Msa0692830-mRNA-1
chr4_4 exon 61504383 61504488 61504383 ID=Msa0692830-mRNA-1:exon:17078;Parent=Msa0692830-mRNA-1
chr4_4 exon 61505196 61505307 61505196 ID=Msa0692830-mRNA-1:exon:17077;Parent=Msa0692830-mRNA-1
chr4_4 exon 61506300 61506397 61506300 ID=Msa0692830-mRNA-1:exon:17076;Parent=Msa0692830-mRNA-1
chr4_4 exon 61506557 61506716 61506557 ID=Msa0692830-mRNA-1:exon:17075;Parent=Msa0692830-mRNA-1
chr4_4 exon 61506732 61506835 61506732 ID=Msa0692830-mRNA-1:exon:17074;Parent=Msa0692830-mRNA-1
chr4_4 exon 61507533 61507668 61507533 ID=Msa0692830-mRNA-1:exon:17073;Parent=Msa0692830-mRNA-1
chr4_4 exon 61507770 61507954 61507770 ID=Msa0692830-mRNA-1:exon:17072;Parent=Msa0692830-mRNA-1
chr4_4 exon 61508287 61508545 61508287 ID=Msa0692830-mRNA-1:exon:17071;Parent=Msa0692830-mRNA-1
chr4_4 exon 61508760 61508863 61508760 ID=Msa0692830-mRNA-1:exon:17070;Parent=Msa0692830-mRNA-1
chr4_4 five_prime_UTR 61508853 61508863 61508853 ID=Msa0692830-mRNA-1:five_prime_utr;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61508760 61508852 61508760 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61508287 61508545 61508287 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61507770 61507954 61507770 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61507533 61507668 61507533 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61506732 61506835 61506732 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61506557 61506716 61506557 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61506300 61506397 61506300 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61505196 61505307 61505196 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61504383 61504488 61504383 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61503356 61503449 61503356 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61503074 61503264 61503074 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61502084 61502183 61502084 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61501874 61501990 61501874 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61501044 61501100 61501044 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 CDS 61500843 61500956 61500843 ID=Msa0692830-mRNA-1:cds;Parent=Msa0692830-mRNA-1
chr4_4 three_prime_UTR 61500716 61500842 61500716 ID=Msa0692830-mRNA-1:three_prime_utr;Parent=Msa0692830-mRNA-1
Gene Sequence

>Msa0692830

ATGTGTGGAATTGCATTGACCGTCTCAGGCATTCGAATTAACATCTCCTCTCTCCCATTCCACTCAACTTCCCCAAATCGCCAATCTGAAAATTTGTTGATCTCTTTAGATGACCTGAAAGAAGCTCTGCGGAGAAGAGGTCCTGATAGCTTGGGTGTGAAGAAAGTTACTCTGCAACACAATGAAAACCAAATCTCATCCTTTATAGAACACGACGAAACGTTATTGTGTTCTGCAAATGAAGACAGTAACGGAGAACTTCATTTCATCGGTGCAACTTTGCAGCTTAGGGGAATTGTTCCGCTTGTTCAGCCTTTAGTGGATGCTTCTCGAAACATTCTGGTGTATAATGGTGAGATTTTCGGAGGACTTCAACTTGCTAGTGATTGCAACGATGCCGAGTTTCTTATGCAGACTCTTGGGAATTGTTGCTCCTGTGGTTCTTATTTGACTGGTAACTGTGTTAAATGCGGGAAAGGTTCTATTACAGATGTTCTTTCTACAATTAAAGGACCATGGGCTATCATCTATTGGCAGGATAGTTCAAGGACCCTTTGGTTTGGCCGAGATGCATTTGGTAGGCGGAGCCTTCTTGTTCACTGGCCTACAGAAGATGATTCAACTTTTCTTCTTTCTTCTGTATCGCCAGTTGCTCCAGATCAGCAGGCCACTGAAAATGAAGCTCATAATGGAATTGAACATCTTAGTTACTGGGAAGAGCTACCATGTGGAATATATAGTATGCACGTGGATGCTTCGAATTCAAACGGATTTCTGATACATGAATATACAAACTCAACATTGAAGGAACTTATCAAGTGGGAGAGAATTTCTGTTGTACCAAGCTCTGAAAACCTGCAGACATCCTGCCCTAAGTTTTCTAGGGGGCAACAAGATGTACATTCAGCTTCTTTAGAGACAGTTCCATGCGAAGCAGGCTCAACTCAAAATTCAATTCCAATGCGAGCTCATATGTTGCTAAATGTTTTAAAGGAATCTGTGATACGACGTACGTCATTGTATACTATCTATCAGGCTGTGATATCTGGTATCAAACAAGAGAAATTTGTTCCTGTTGCAATTCTTTTCTCTGGTGGGCTGGATTCTATGATACTTGCGGCATTACTGGATCAATGCCTGGATCCCAATGAAATTGATCTACTTACTGTAAGCTTTGATGGCGAGTTAGCTCCTGATAGAAAATCTGCCAAGGCAGGGTTGAAAGAACTAAAAAGAGTTGCACCGTCAAGACGGTGGAGACTCGTGGAGATTGATGCTGACTTGTCAGATTTGGTGTCTGAGACTAGTCATGTTATGTCACTCATAAATCCTTCCAACACCTACATGGACCTTAACATTGGAATAGCTTTATGGCTCGCTTCTGGTGGTGATGGATGGGTGTCTGATGCAGATGATAATGATGACACTCATGCACGGATTAAATACAAGTCCAATGCAAGGATTCTCCTTGTTGGTTCTGGTGCTGATGAACAGTGTGCTGGTTATGGGAGACATAGAACAAGTTTTAGACGAGGAAGTTGGCTGGGGCTAGATGAGGAAATGAAACTCGACATGCAAAGAATTTGGAAGAGAAATTTAGGGAGAGATGATAGATGTATTGCTGATAACGGGAAGGAGGCTAGATTTCCATTCTTGGATGAGGATGTTATAAGGGTTTTACTCAACATTCCATTGTGGGAGGTTGCCAACCTTGATCAACCTAGTGGCATCGGTGATAAAAAGATTTTAAGAGAGGTTGCACAATTGCTTGGTTTATATGAAGCAGCGGTTCTTCCCAAGCGGGCAATCCAGTTTGGTTCTAGAATTGCGAGGGAATCAAATCGGAAGAATTTTGGAAGTAATCGAGCAGCAAATCAGGCGTCTGCAGGCAGTGTAAGGATTTGTAGGAAATCAAATTTTGGTTGA

Protein sequence

>Msa0692830

MCGIALTVSGIRINISSLPFHSTSPNRQSENLLISLDDLKEALRRRGPDSLGVKKVTLQHNENQISSFIEHDETLLCSANEDSNGELHFIGATLQLRGIVPLVQPLVDASRNILVYNGEIFGGLQLASDCNDAEFLMQTLGNCCSCGSYLTGNCVKCGKGSITDVLSTIKGPWAIIYWQDSSRTLWFGRDAFGRRSLLVHWPTEDDSTFLLSSVSPVAPDQQATENEAHNGIEHLSYWEELPCGIYSMHVDASNSNGFLIHEYTNSTLKELIKWERISVVPSSENLQTSCPKFSRGQQDVHSASLETVPCEAGSTQNSIPMRAHMLLNVLKESVIRRTSLYTIYQAVISGIKQEKFVPVAILFSGGLDSMILAALLDQCLDPNEIDLLTVSFDGELAPDRKSAKAGLKELKRVAPSRRWRLVEIDADLSDLVSETSHVMSLINPSNTYMDLNIGIALWLASGGDGWVSDADDNDDTHARIKYKSNARILLVGSGADEQCAGYGRHRTSFRRGSWLGLDEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRVLLNIPLWEVANLDQPSGIGDKKILREVAQLLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVRICRKSNFG*