AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1062920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1062920 MtrunA17_Chr7g0241611 97.536 690 17 0 1 690 1 690 0.0 1397
Msa1062920 MtrunA17_Chr4g0005821 79.191 692 128 6 1 687 1 681 0.0 1079
Msa1062920 MtrunA17_Chr7g0259681 63.240 642 214 9 57 690 8 635 0.0 804
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1062920 AT3G09100.2 66.619 695 204 9 1 690 1 672 0.0 911
Msa1062920 AT5G01290.1 63.768 690 213 11 5 690 1 657 0.0 850
Msa1062920 AT5G28210.1 56.053 603 224 16 98 690 48 619 0.0 644
Msa1062920 AT3G09100.1 64.435 478 148 5 1 474 1 460 0.0 605

Find 197 sgRNAs with CRISPR-Local

Find 699 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCCATCATATGATTTA+AGG 0.113031 7_2:+54066302 None:intergenic
CCTGTATGTGAATATTAATT+TGG 0.149156 7_2:-54058104 Msa1062920:three_prime_UTR
TATATGACATGGAGCCTTTC+AGG 0.186417 7_2:-54060397 Msa1062920:CDS
CTGCTTTCAGATACTCAAAT+TGG 0.211849 7_2:-54063236 Msa1062920:CDS
ATGATTTAAGGATCTTATTA+TGG 0.232235 7_2:+54066314 None:intergenic
AATGACAAACGATGATGTTT+TGG 0.244746 7_2:-54063302 Msa1062920:CDS
TCAGACCCCATGCTTTATTC+TGG 0.261086 7_2:-54058782 Msa1062920:CDS
CTAGATGAATAGTTAGGTTT+AGG 0.263899 7_2:-54058237 Msa1062920:three_prime_UTR
ATGGTACCGTTCATGATTCC+TGG 0.271885 7_2:+54060439 None:intergenic
CTGTATGTGAATATTAATTT+GGG 0.281448 7_2:-54058103 Msa1062920:three_prime_UTR
CCACTTTCTATGTGCTCTTC+TGG 0.283156 7_2:+54067295 None:intergenic
TTTCGGCATGATACCTTCTA+AGG 0.285277 7_2:-54065713 Msa1062920:CDS
ACTTAACAAAGAAAATTATA+AGG 0.289803 7_2:+54058197 None:intergenic
CGCAGATGGTCTCATATTTC+AGG 0.293837 7_2:-54060207 Msa1062920:intron
GAGAGAGAAGTGTAACTATA+AGG 0.300832 7_2:+54068228 None:intergenic
GCAGGACAGACTATCGTTTC+AGG 0.301819 7_2:+54064400 None:intergenic
CTTGAATGCCTCTCCTTTGC+CGG 0.304993 7_2:-54067398 Msa1062920:CDS
TAACCACAAGAAATGGTTTC+AGG 0.313779 7_2:+54058261 None:intergenic
TTGGACCTGTCTAAAGAAAC+TGG 0.317774 7_2:+54062226 None:intergenic
GTTCATCGTATCATGTAATT+AGG 0.318973 7_2:-54058327 Msa1062920:three_prime_UTR
CCGCCATCAGATCATATATT+AGG 0.327193 7_2:+54061352 None:intergenic
GAATAATACCTTGTAATAAC+TGG 0.327378 7_2:+54057992 None:intergenic
TTTGGATGATGTTCATTTGC+AGG 0.327535 7_2:+54058351 None:intergenic
AATCGACACCGCTCAAATTC+GGG 0.331028 7_2:-54058284 Msa1062920:three_prime_UTR
ACATTGTGCGCATTAGATAA+TGG 0.340793 7_2:+54064618 None:intergenic
ATATATGATGCTAATAACTA+TGG 0.345799 7_2:-54061649 Msa1062920:CDS
TTCTGCATTTACCTCCTTAG+TGG 0.350382 7_2:-54058038 Msa1062920:three_prime_UTR
TAATCGACACCGCTCAAATT+CGG 0.351664 7_2:-54058285 Msa1062920:three_prime_UTR
TACTCAGGTTTATAGATTCC+TGG 0.355706 7_2:+54064460 None:intergenic
CACCACTTCACATTACTTGA+TGG 0.363178 7_2:-54061426 Msa1062920:CDS
TCATCATCGTCATCATTATC+TGG 0.364129 7_2:+54064322 None:intergenic
TCTTTCTTTAGATCTGATAC+TGG 0.364157 7_2:+54065327 None:intergenic
TGCTTTCAGATACTCAAATT+GGG 0.364970 7_2:-54063235 Msa1062920:CDS
CTTGTAAGTATTGAAGTCAT+TGG 0.367108 7_2:+54058682 None:intergenic
ACTTGCACGGGCCTGTCATC+TGG 0.368081 7_2:+54066367 None:intergenic
CCAAATTAATATTCACATAC+AGG 0.368524 7_2:+54058104 None:intergenic
TCTTATCCTGTCGGCATACA+TGG 0.371242 7_2:+54058497 None:intergenic
CGTTGGCTTGCAGCTTGGTC+TGG 0.378002 7_2:-54065382 Msa1062920:intron
CCATTGAGATCAACAAGTTC+GGG 0.379557 7_2:+54064355 None:intergenic
TCACCCAATGGAACCTTAGA+AGG 0.388575 7_2:+54065700 None:intergenic
TGGAAATTGCATGTGTCCTC+TGG 0.394540 7_2:+54062258 None:intergenic
GTGTGTAATGACAATTTCTA+TGG 0.394814 7_2:-54067422 Msa1062920:exon
AATGCATCTTGCTGATCATT+AGG 0.395304 7_2:+54063268 None:intergenic
AGAGAGAAACAGTGACAGTT+AGG 0.396261 7_2:+54068200 None:intergenic
ATGATCAGCAAGATGCATTT+CGG 0.401431 7_2:-54063264 Msa1062920:CDS
ACCATTGAGATCAACAAGTT+CGG 0.403010 7_2:+54064354 None:intergenic
TCTCGTTTATTTCAGTCAAC+AGG 0.403952 7_2:+54058532 None:intergenic
CTCCTTAGTGGAAGCTATGT+TGG 0.406529 7_2:-54058026 Msa1062920:three_prime_UTR
AGAGGACACATGCAATTTCC+AGG 0.406784 7_2:-54062256 Msa1062920:CDS
ATCTAGATAACCACAAGAAA+TGG 0.409012 7_2:+54058254 None:intergenic
TGGTTGGATTGCCCTTCGTC+TGG 0.413355 7_2:-54065745 Msa1062920:CDS
CTGAGCCGCGGCCCTTGCAT+TGG 0.430652 7_2:+54065167 None:intergenic
CTCTTCCACTCCGGAGTAGC+AGG 0.432247 7_2:+54064382 None:intergenic
GGTTATCTAGATGAATAGTT+AGG 0.433126 7_2:-54058243 Msa1062920:three_prime_UTR
CTGCTACTCCGGAGTGGAAG+AGG 0.435765 7_2:-54064381 Msa1062920:CDS
GTGGTTACAAATTGTTGAAA+GGG 0.436588 7_2:-54058173 Msa1062920:three_prime_UTR
GAAAGATCATCGAGTGTGCT+TGG 0.437704 7_2:-54058760 Msa1062920:CDS
TACATGATACGATGAACCTT+TGG 0.439323 7_2:+54058333 None:intergenic
TTGTAAGTATTGAAGTCATT+GGG 0.442744 7_2:+54058683 None:intergenic
TTCAAATGAGGTTTCCATGC+AGG 0.443363 7_2:-54061584 Msa1062920:CDS
AGAGGGTATCAAGCATGTTA+AGG 0.443861 7_2:-54065307 Msa1062920:intron
TCATTATTGTGTCAATCTCA+TGG 0.446224 7_2:+54063320 None:intergenic
GGATTGCCCTTCGTCTGGCC+AGG 0.452831 7_2:-54065740 Msa1062920:CDS
GTATCATGCCGAAAATTTCC+TGG 0.453234 7_2:+54065722 None:intergenic
CACACCCAGTTTCTTTAGAC+AGG 0.457416 7_2:-54062231 Msa1062920:intron
AATGTCAATGTCTGTTACTC+AGG 0.460206 7_2:-54064600 Msa1062920:intron
CCAGAAGAGCACATAGAAAG+TGG 0.461582 7_2:-54067295 Msa1062920:CDS
GATACCTTCTAAGGTTCCAT+TGG 0.465384 7_2:-54065704 Msa1062920:CDS
ATGCAGAATAACTTCTACAT+TGG 0.470638 7_2:+54058053 None:intergenic
GATAGTCTGTCCTGCTACTC+CGG 0.471499 7_2:-54064392 Msa1062920:CDS
TCTTCGACCTGGCCCTCAAA+AGG 0.473582 7_2:+54067361 None:intergenic
TCCTTAGTGGAAGCTATGTT+GGG 0.474664 7_2:-54058025 Msa1062920:three_prime_UTR
TCCATGTCATATATATAGTA+AGG 0.476655 7_2:+54060407 None:intergenic
TTTGAAGTTTGCGTGGTTTG+AGG 0.476850 7_2:-54067965 Msa1062920:intron
AGTGGTTACAAATTGTTGAA+AGG 0.483792 7_2:-54058174 Msa1062920:three_prime_UTR
TGATTGACAGATGAATTATC+AGG 0.486142 7_2:+54065142 None:intergenic
ACCACTTCACATTACTTGAT+GGG 0.490316 7_2:-54061425 Msa1062920:CDS
CTTAACAAAGAAAATTATAA+GGG 0.490875 7_2:+54058198 None:intergenic
CTCATGAAGGTCTCTTAAAG+TGG 0.491856 7_2:-54059718 Msa1062920:CDS
CCCGAACTTGTTGATCTCAA+TGG 0.492780 7_2:-54064355 Msa1062920:CDS
ATACCTTCTAAGGTTCCATT+GGG 0.493016 7_2:-54065703 Msa1062920:CDS
TTATTTACATGCAGGTTGGT+TGG 0.495751 7_2:-54065761 Msa1062920:intron
CAACTGCGTGTCTGTGATAG+AGG 0.497145 7_2:-54061328 Msa1062920:intron
AGTATCAGATCTAAAGAAAG+AGG 0.498017 7_2:-54065325 Msa1062920:CDS
TCATGAGTACGAGGTACATA+AGG 0.503688 7_2:+54059734 None:intergenic
TGGTTATTTGAATTGTATTG+TGG 0.504212 7_2:-54067465 Msa1062920:five_prime_UTR
TGATGGAAGTAAGCTTCCTC+CGG 0.506250 7_2:-54066290 Msa1062920:CDS
GGGTTTATTGTTGCATTCAA+AGG 0.508778 7_2:-54059477 Msa1062920:intron
AAAGCTTGTATAATTCTAGT+AGG 0.509831 7_2:-54068125 Msa1062920:intron
TCTGCGTCGTGTGAGAGCTT+CGG 0.511610 7_2:+54060224 None:intergenic
AAGATCCTTAAATCATATGA+TGG 0.512777 7_2:-54066307 Msa1062920:CDS
TGGAGCTGATATAGCTCGCC+GGG 0.516184 7_2:-54067275 Msa1062920:intron
TGGTACCGTTCATGATTCCT+GGG 0.518111 7_2:+54060440 None:intergenic
TATGAAATTCATACTTGCAA+CGG 0.519874 7_2:+54064280 None:intergenic
TCAAATGAGGTTTCCATGCA+GGG 0.525334 7_2:-54061583 Msa1062920:CDS
AAAGAAACTGGGTGTGACCC+TGG 0.527134 7_2:+54062238 None:intergenic
AGATTCAAGTTTCATTACAT+TGG 0.527636 7_2:-54058138 Msa1062920:three_prime_UTR
ATCTTTCCAGAATAAAGCAT+GGG 0.532742 7_2:+54058776 None:intergenic
ACATCATTTGCAACCCTGCA+TGG 0.534363 7_2:+54061570 None:intergenic
ATGTTGAAAGATAGATCAAA+GGG 0.534629 7_2:-54058386 Msa1062920:three_prime_UTR
AAAGGATCTTCATCTTCCTC+CGG 0.535591 7_2:+54067379 None:intergenic
GCCTTCCCATGTATGCCGAC+AGG 0.536050 7_2:-54058503 Msa1062920:CDS
TGTGGCGGGTGAATGTTACT+TGG 0.537448 7_2:-54067447 Msa1062920:five_prime_UTR
CAGAACGGTTCTCAGAGTGA+TGG 0.537616 7_2:+54068149 None:intergenic
GTCTGTAAAGCTTTCACTGG+TGG 0.538117 7_2:-54058418 Msa1062920:three_prime_UTR
ATATGACATGGAGCCTTTCA+GGG 0.538294 7_2:-54060396 Msa1062920:intron
TCGGGAGCCCTCTTCCACTC+CGG 0.539359 7_2:+54064373 None:intergenic
AAAGAGAGCGTCCAGATGAC+AGG 0.539782 7_2:-54066378 Msa1062920:CDS
AGGTGGCTGTGATACTTGCA+CGG 0.543666 7_2:+54066354 None:intergenic
ATCTTCCACCGCTCACAGAA+AGG 0.545618 7_2:+54060485 None:intergenic
GCTTTCAGATACTCAAATTG+GGG 0.546530 7_2:-54063234 Msa1062920:CDS
TATAATGAATCAATATACTC+AGG 0.549904 7_2:+54064445 None:intergenic
TCTTCATCTTCCTCCGGCAA+AGG 0.550629 7_2:+54067385 None:intergenic
TCAGAAATGCATACCCTGAA+AGG 0.550897 7_2:+54060383 None:intergenic
GCTATCGATTCTTATCCTGT+CGG 0.551715 7_2:+54058488 None:intergenic
GGTGGCTGTGATACTTGCAC+GGG 0.553801 7_2:+54066355 None:intergenic
TTCAGTCAACAGGACATCCT+CGG 0.555159 7_2:+54058542 None:intergenic
ATACCTAATATATGATCTGA+TGG 0.556235 7_2:-54061355 Msa1062920:CDS
TCTGTAAAGCTTTCACTGGT+GGG 0.556468 7_2:-54058417 Msa1062920:three_prime_UTR
AGTAATCAGTGAGGAACTCA+TGG 0.557728 7_2:-54058440 Msa1062920:exon
TAGATCCAATGCAAGGGCCG+CGG 0.559315 7_2:-54065172 Msa1062920:CDS
TGCTACTCCGGAGTGGAAGA+GGG 0.559470 7_2:-54064380 Msa1062920:CDS
CATACTTGCAACGGAGGACC+TGG 0.559887 7_2:+54064289 None:intergenic
GCAAAGGACATCATGTAGCT+AGG 0.560997 7_2:-54058467 Msa1062920:CDS
ATCTTCCTCCGGCAAAGGAG+AGG 0.560999 7_2:+54067390 None:intergenic
AAAGATCATCGAGTGTGCTT+GGG 0.561891 7_2:-54058759 Msa1062920:CDS
TCCTGTCGGCATACATGGGA+AGG 0.564005 7_2:+54058502 None:intergenic
AATGATGACGATGATGATGA+TGG 0.565460 7_2:-54064316 Msa1062920:CDS
TATGCAACATGGAAAGCTGA+TGG 0.568109 7_2:-54061678 Msa1062920:CDS
AGCAGCGGCCTTTCTGTGAG+CGG 0.568282 7_2:-54060493 Msa1062920:intron
AAGCTCTCACACGACGCAGA+TGG 0.569710 7_2:-54060221 Msa1062920:CDS
AAAATTTCCTGGCCAGACGA+AGG 0.570217 7_2:+54065733 None:intergenic
GCGCATTATACTCTTCGACC+TGG 0.572801 7_2:+54067350 None:intergenic
AAATTTCCTGGCCAGACGAA+GGG 0.572890 7_2:+54065734 None:intergenic
TATGTTGAAAGATAGATCAA+AGG 0.574257 7_2:-54058387 Msa1062920:three_prime_UTR
ATGGTCTGTAAAGCTTTCAC+TGG 0.574520 7_2:-54058421 Msa1062920:three_prime_UTR
CCCCATCAAGTAATGTGAAG+TGG 0.580537 7_2:+54061424 None:intergenic
ACACATGGTCACAATCGTAC+AGG 0.581359 7_2:-54064653 Msa1062920:CDS
ATGATGCTAATAACTATGGA+TGG 0.584416 7_2:-54061645 Msa1062920:CDS
GTGCAAGTATCACAGCCACC+TGG 0.585488 7_2:-54066352 Msa1062920:CDS
TATGTACCTCGTACTCATGA+AGG 0.587394 7_2:-54059731 Msa1062920:CDS
TGTGGTTTAGATCCAATGCA+AGG 0.587594 7_2:-54065179 Msa1062920:intron
TCCCAACATAGCTTCCACTA+AGG 0.587599 7_2:+54058024 None:intergenic
CAAATTAATATTCACATACA+GGG 0.588024 7_2:+54058105 None:intergenic
GATGATGATGATGGAGTACC+AGG 0.588112 7_2:-54064307 Msa1062920:CDS
AGATCAAAGGGATCTACTGA+TGG 0.589708 7_2:-54058374 Msa1062920:three_prime_UTR
TGACTTCAATACTTACAAGA+AGG 0.590135 7_2:-54058678 Msa1062920:intron
CTTATCCTGTCGGCATACAT+GGG 0.592745 7_2:+54058498 None:intergenic
TTATTTGAATTGTATTGTGG+CGG 0.593201 7_2:-54067462 Msa1062920:five_prime_UTR
GGGCCTGAAACCATTTCTTG+TGG 0.595990 7_2:-54058264 Msa1062920:three_prime_UTR
GATGGAAGTAAGCTTCCTCC+GGG 0.598868 7_2:-54066289 Msa1062920:intron
TTATAGATACCGTCTTATGT+AGG 0.600620 7_2:-54067490 Msa1062920:five_prime_UTR
AGGTAAAATATCGTCAGTGA+AGG 0.602869 7_2:+54065675 None:intergenic
GTGGAGCTGATATAGCTCGC+CGG 0.603735 7_2:-54067276 Msa1062920:CDS
GAATGCCTCTCCTTTGCCGG+AGG 0.607982 7_2:-54067395 Msa1062920:CDS
TCAGTGAAGGATTCACCCAA+TGG 0.608491 7_2:+54065688 None:intergenic
TATTTGAATTGTATTGTGGC+GGG 0.609126 7_2:-54067461 Msa1062920:five_prime_UTR
CCACTTCACATTACTTGATG+GGG 0.609587 7_2:-54061424 Msa1062920:CDS
GGCGGGTGAATGTTACTTGG+TGG 0.610796 7_2:-54067444 Msa1062920:five_prime_UTR
TTTCTGAATGTGCAGGCCAG+AGG 0.611157 7_2:-54062274 Msa1062920:intron
TCTGAAATGATTAGGTGAGG+AGG 0.612439 7_2:-54060298 Msa1062920:intron
GATCTTTCCAGAATAAAGCA+TGG 0.617360 7_2:+54058775 None:intergenic
AGGGGAATTTGAAGTTTGCG+TGG 0.617804 7_2:-54067972 Msa1062920:five_prime_UTR
ATAACCACACCTACATAAGA+CGG 0.620047 7_2:+54067481 None:intergenic
GTTTCAGGCCCGAATTTGAG+CGG 0.624456 7_2:+54058276 None:intergenic
TGCAAATGAACATCATCCAA+AGG 0.627806 7_2:-54058349 Msa1062920:three_prime_UTR
GTGGTTTAGATCCAATGCAA+GGG 0.629105 7_2:-54065178 Msa1062920:intron
CAACATAGCTTCCACTAAGG+AGG 0.629598 7_2:+54058027 None:intergenic
ATACTTGTTCATTGTACACA+TGG 0.630429 7_2:-54064668 Msa1062920:CDS
GAAATTCATACTTGCAACGG+AGG 0.631537 7_2:+54064283 None:intergenic
TCCTTACTATATATATGACA+TGG 0.631783 7_2:-54060408 Msa1062920:CDS
AGGATAAGAATCGATAGCAA+AGG 0.635554 7_2:-54058483 Msa1062920:CDS
TATAGTAAGGATGTTTGCGA+TGG 0.637258 7_2:+54060420 None:intergenic
GTATCAGATCTAAAGAAAGA+GGG 0.640851 7_2:-54065324 Msa1062920:CDS
TGTCAATCACTTTGTGTACG+AGG 0.643052 7_2:-54065128 Msa1062920:intron
TCTGTCCTGCTACTCCGGAG+TGG 0.644223 7_2:-54064387 Msa1062920:CDS
TGGACCTGTCTAAAGAAACT+GGG 0.648364 7_2:+54062227 None:intergenic
GAGGACACATGCAATTTCCA+GGG 0.649406 7_2:-54062255 Msa1062920:CDS
AGAAAGAAGTGATTGAACCC+AGG 0.649900 7_2:-54060457 Msa1062920:CDS
ATGTTGCATAGTAGTAACGC+TGG 0.651191 7_2:+54061691 None:intergenic
AACGTGAAGAAAGAAAGAAA+CGG 0.652918 7_2:-54066405 Msa1062920:CDS
GCGCAATATACTCTTCGACC+TGG 0.662702 7_2:+54067317 None:intergenic
TGTATGTGAATATTAATTTG+GGG 0.663899 7_2:-54058102 Msa1062920:three_prime_UTR
AGCGTTACTACTATGCAACA+TGG 0.671428 7_2:-54061689 Msa1062920:CDS
CTTTCAGATACTCAAATTGG+GGG 0.674339 7_2:-54063233 Msa1062920:CDS
AATTATCAGGTACTGAGCCG+CGG 0.676080 7_2:+54065155 None:intergenic
TGTCGGCATACATGGGAAGG+CGG 0.676239 7_2:+54058505 None:intergenic
GATACCGTCTTATGTAGGTG+TGG 0.677078 7_2:-54067485 Msa1062920:five_prime_UTR
ATCATCGAGTGTGCTTGGGA+TGG 0.677706 7_2:-54058755 Msa1062920:CDS
TTGAACCCAGGAATCATGAA+CGG 0.698189 7_2:-54060445 Msa1062920:CDS
TCTTTCCAGAATAAAGCATG+GGG 0.710208 7_2:+54058777 None:intergenic
CCTAATATATGATCTGATGG+CGG 0.716701 7_2:-54061352 Msa1062920:CDS
AAGAGACCTTCATGAGTACG+AGG 0.716715 7_2:+54059725 None:intergenic
TCAGGTTTATAGATTCCTGG+AGG 0.718001 7_2:+54064463 None:intergenic
GGGATGGTGATAGAAACGAA+TGG 0.727257 7_2:-54058739 Msa1062920:CDS
CATAAAAGACAATATCACCG+AGG 0.749317 7_2:-54058559 Msa1062920:CDS
CTAGGCGAAAGTAATCAGTG+AGG 0.795658 7_2:-54058449 Msa1062920:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAATATAAAAAATAACA+CGG - chr7_2:54058738-54058757 Msa1062920:CDS 10.0%
!!! TCTTTTTTTTTTTTTTTTCA+AGG - chr7_2:54063740-54063759 Msa1062920:intron 10.0%
!!! AATAATGAAAACAATTATTT+TGG + chr7_2:54064315-54064334 None:intergenic 10.0%
!! AAATTGAAAATAAGAAAAAA+AGG + chr7_2:54065154-54065173 None:intergenic 10.0%
!!! TTAATTTAGTTTATTTTCTA+TGG - chr7_2:54065263-54065282 Msa1062920:intron 10.0%
!!! TTTGTTATAAATATACAAAT+AGG - chr7_2:54067041-54067060 Msa1062920:intron 10.0%
!! TAAATAGTTAAGGATATAAT+AGG - chr7_2:54059639-54059658 Msa1062920:intron 15.0%
!! AAGTAACATTAATATTTCAT+TGG - chr7_2:54059664-54059683 Msa1062920:intron 15.0%
!!! AGTTATTCTAAAATTTGTTT+TGG - chr7_2:54060281-54060300 Msa1062920:CDS 15.0%
!!! GTTATTCTAAAATTTGTTTT+GGG - chr7_2:54060282-54060301 Msa1062920:CDS 15.0%
!! TAAATATATCAAATGTCTTA+AGG + chr7_2:54060457-54060476 None:intergenic 15.0%
!!! TTTTCATATAAGTTTTAGTA+CGG - chr7_2:54060757-54060776 Msa1062920:intron 15.0%
!! CTATATACTTAAAAAACATA+TGG + chr7_2:54061072-54061091 None:intergenic 15.0%
!! TCTATCTAATTAATATTAGT+TGG - chr7_2:54061456-54061475 Msa1062920:intron 15.0%
!! AAATCACAATTTAAAAAGAA+GGG + chr7_2:54063973-54063992 None:intergenic 15.0%
!! AAAATCACAATTTAAAAAGA+AGG + chr7_2:54063974-54063993 None:intergenic 15.0%
!! GATATATTATATTAACAAAG+TGG - chr7_2:54064154-54064173 Msa1062920:intron 15.0%
!! TTTCCTTATTAACAAATTTA+TGG - chr7_2:54065791-54065810 Msa1062920:intron 15.0%
!!! TAACCATAAATTTGTTAATA+AGG + chr7_2:54065797-54065816 None:intergenic 15.0%
!! CTTAACAAAGAAAATTATAA+GGG + chr7_2:54068132-54068151 None:intergenic 15.0%
!! ACTTAACAAAGAAAATTATA+AGG + chr7_2:54068133-54068152 None:intergenic 15.0%
!!! GTTTATTTTTGTTTTTACTC+AGG - chr7_2:54058298-54058317 Msa1062920:three_prime_UTR 20.0%
!!! AATTAGTTAATTCTAGTTGT+TGG - chr7_2:54058486-54058505 Msa1062920:CDS 20.0%
!!! ATTAGTTAATTCTAGTTGTT+GGG - chr7_2:54058487-54058506 Msa1062920:CDS 20.0%
!!! CATATGAAGTATTTTTCATA+AGG - chr7_2:54058611-54058630 Msa1062920:intron 20.0%
!!! AAGGATTTAGTAATTTTTCT+AGG - chr7_2:54058630-54058649 Msa1062920:intron 20.0%
!!! ATTTTTCTAGGAGAATTTTT+TGG - chr7_2:54058642-54058661 Msa1062920:intron 20.0%
!!! TTGAATTAATTTTCCTTACA+GGG + chr7_2:54058695-54058714 None:intergenic 20.0%
!!! TTTGAATTAATTTTCCTTAC+AGG + chr7_2:54058696-54058715 None:intergenic 20.0%
!!! ATAGGATTGATAATATGAAT+TGG - chr7_2:54058800-54058819 Msa1062920:intron 20.0%
!! CAAAAAATATCATGAAATAG+CGG + chr7_2:54059356-54059375 None:intergenic 20.0%
!! GAGAGAATAATAAATAGTTA+AGG - chr7_2:54059629-54059648 Msa1062920:intron 20.0%
!!! TTCTAAAATGACATACAATT+TGG - chr7_2:54059724-54059743 Msa1062920:CDS 20.0%
!!! TCTAAAATGACATACAATTT+GGG - chr7_2:54059725-54059744 Msa1062920:CDS 20.0%
!!! TTATTTTCATAAGGTTTAGT+TGG - chr7_2:54059761-54059780 Msa1062920:intron 20.0%
!!! TATTTTCATAAGGTTTAGTT+GGG - chr7_2:54059762-54059781 Msa1062920:intron 20.0%
!! ATGATTTAAGGATCTTATTA+TGG + chr7_2:54060016-54060035 None:intergenic 20.0%
!! TATACAATTCCATTTATCTT+TGG - chr7_2:54060196-54060215 Msa1062920:intron 20.0%
!! ATACAATTCCATTTATCTTT+GGG - chr7_2:54060197-54060216 Msa1062920:intron 20.0%
!! ATAAATATCCCAAAGATAAA+TGG + chr7_2:54060208-54060227 None:intergenic 20.0%
!!! GATTTTCTATTTATAAATGC+TGG - chr7_2:54060408-54060427 Msa1062920:CDS 20.0%
!! TCATTATATTATTTACATGC+AGG - chr7_2:54060558-54060577 Msa1062920:intron 20.0%
!! ATGAAACAATGAAAGAAAAA+AGG - chr7_2:54060811-54060830 Msa1062920:intron 20.0%
!! TGAAACAATGAAAGAAAAAA+GGG - chr7_2:54060812-54060831 Msa1062920:intron 20.0%
!! AACGTAACAAATTGTAAAAA+AGG + chr7_2:54060929-54060948 None:intergenic 20.0%
!!! TTTTTTACAATTTGTTACGT+TGG - chr7_2:54060928-54060947 Msa1062920:intron 20.0%
!! TACTTAAAAAACATATGGTT+GGG + chr7_2:54061067-54061086 None:intergenic 20.0%
!! ATACTTAAAAAACATATGGT+TGG + chr7_2:54061068-54061087 None:intergenic 20.0%
!! ATAGTATACCTTTATATAAG+TGG - chr7_2:54061088-54061107 Msa1062920:intron 20.0%
!! TAGTATACCTTTATATAAGT+GGG - chr7_2:54061089-54061108 Msa1062920:intron 20.0%
!!! TTGAGTTATTTTGAAGAATA+TGG - chr7_2:54061255-54061274 Msa1062920:intron 20.0%
!! ATGAAATCAATGCATTAAAT+AGG + chr7_2:54061385-54061404 None:intergenic 20.0%
!! TGGAATTGAAAATAATCATA+CGG + chr7_2:54061596-54061615 None:intergenic 20.0%
!! TATAATGAATCAATATACTC+AGG + chr7_2:54061885-54061904 None:intergenic 20.0%
!! AAATAAATAAATCTTCCAGT+TGG + chr7_2:54062209-54062228 None:intergenic 20.0%
!!! AACATTCTAAAAACTTTCTT+TGG - chr7_2:54062256-54062275 Msa1062920:CDS 20.0%
!!! ACATTCTAAAAACTTTCTTT+GGG - chr7_2:54062257-54062276 Msa1062920:CDS 20.0%
!!! AATTTTCCTTTGGAATAATA+TGG - chr7_2:54062364-54062383 Msa1062920:intron 20.0%
!!! GTATTGATTTTTCTAGATTT+TGG - chr7_2:54062437-54062456 Msa1062920:intron 20.0%
!!! CTAGATTTTGGAAAAAATAA+CGG - chr7_2:54062449-54062468 Msa1062920:intron 20.0%
!!! TAGATTTTGGAAAAAATAAC+GGG - chr7_2:54062450-54062469 Msa1062920:intron 20.0%
!! ATAAAGATTTAATTACCATC+AGG + chr7_2:54062963-54062982 None:intergenic 20.0%
!!! TAATTTTTGCTATGCAATTT+AGG + chr7_2:54063462-54063481 None:intergenic 20.0%
!! TTGCATAGCAAAAATTAAAT+TGG - chr7_2:54063465-54063484 Msa1062920:intron 20.0%
!!! TTTTTTTTTTTCAAGGTGTT+TGG - chr7_2:54063747-54063766 Msa1062920:intron 20.0%
!! AATCACAATTTAAAAAGAAG+GGG + chr7_2:54063972-54063991 None:intergenic 20.0%
!! AGATACATTAATAAGGTAAA+GGG + chr7_2:54064016-54064035 None:intergenic 20.0%
!! ATCAATATATAGCATGTTAA+TGG + chr7_2:54064137-54064156 None:intergenic 20.0%
!! TTAACATACTATGGATAAAA+AGG + chr7_2:54064574-54064593 None:intergenic 20.0%
!! CAACAAAATTTAACATACTA+TGG + chr7_2:54064583-54064602 None:intergenic 20.0%
!! ATATATGATGCTAATAACTA+TGG - chr7_2:54064678-54064697 Msa1062920:CDS 20.0%
!!! ATAGAAACTTCAATTTTAGA+AGG - chr7_2:54064719-54064738 Msa1062920:intron 20.0%
!! CTAATACTGTTAATTTAAAG+TGG - chr7_2:54064795-54064814 Msa1062920:intron 20.0%
!!! ATTTAAAGTGGAATTTAAAG+TGG - chr7_2:54064807-54064826 Msa1062920:intron 20.0%
!! ACATTATGATATACAAAAGT+AGG - chr7_2:54065450-54065469 Msa1062920:intron 20.0%
!! CATTATGATATACAAAAGTA+GGG - chr7_2:54065451-54065470 Msa1062920:intron 20.0%
!! TAACAAATTTATGGTTAATC+TGG - chr7_2:54065800-54065819 Msa1062920:intron 20.0%
!!! GATATATATCTGAAATGATT+AGG - chr7_2:54066021-54066040 Msa1062920:intron 20.0%
!! AAATATACAAATAGGACAAT+TGG - chr7_2:54067049-54067068 Msa1062920:intron 20.0%
!!! TCATGTTTTTTTAGTTCATT+CGG - chr7_2:54067479-54067498 Msa1062920:five_prime_UTR 20.0%
!! AAAAGGAAATTCAAAATCAA+AGG + chr7_2:54067688-54067707 None:intergenic 20.0%
!!! TAATTTTCTTTGTTAAGTAG+TGG - chr7_2:54068135-54068154 Msa1062920:five_prime_UTR 20.0%
!! CAAATTAATATTCACATACA+GGG + chr7_2:54068225-54068244 None:intergenic 20.0%
!! CTGTATGTGAATATTAATTT+GGG - chr7_2:54068224-54068243 Msa1062920:five_prime_UTR 20.0%
!!! TGTATGTGAATATTAATTTG+GGG - chr7_2:54068225-54068244 Msa1062920:five_prime_UTR 20.0%
! GTTTGAAGAAAAAGTGATTA+TGG + chr7_2:54058030-54058049 None:intergenic 25.0%
!! ATTATACAAGCTTTTCAGAA+CGG + chr7_2:54058196-54058215 None:intergenic 25.0%
! AAAGCTTGTATAATTCTAGT+AGG - chr7_2:54058202-54058221 Msa1062920:three_prime_UTR 25.0%
! TTGTATAATTCTAGTAGGTA+GGG - chr7_2:54058207-54058226 Msa1062920:three_prime_UTR 25.0%
!!! AGGTTTTGTTAATTTGTTTC+AGG - chr7_2:54058318-54058337 Msa1062920:three_prime_UTR 25.0%
!!! TTTTGATGTTTGTTGAAGTT+AGG - chr7_2:54058423-54058442 Msa1062920:three_prime_UTR 25.0%
!! AGAGAAATATGTGATTTTGT+TGG - chr7_2:54058530-54058549 Msa1062920:CDS 25.0%
!! GAGAAATATGTGATTTTGTT+GGG - chr7_2:54058531-54058550 Msa1062920:CDS 25.0%
! TGGTTATTTGAATTGTATTG+TGG - chr7_2:54058862-54058881 Msa1062920:intron 25.0%
! TTATTTGAATTGTATTGTGG+CGG - chr7_2:54058865-54058884 Msa1062920:intron 25.0%
! AAGTAAGAATAGAGAAGAAA+GGG + chr7_2:54059080-54059099 None:intergenic 25.0%
! AAAGTAAGAATAGAGAAGAA+AGG + chr7_2:54059081-54059100 None:intergenic 25.0%
! CAATCAATGTTGTTAAATAG+CGG + chr7_2:54059442-54059461 None:intergenic 25.0%
!! TTTAACAACATTGATTGGTA+TGG - chr7_2:54059445-54059464 Msa1062920:intron 25.0%
! ATTGTCCGTAATAAATGATA+TGG - chr7_2:54059579-54059598 Msa1062920:intron 25.0%
! TTGTCCGTAATAAATGATAT+GGG - chr7_2:54059580-54059599 Msa1062920:intron 25.0%
! TTGTAAAGCGACATATAATT+TGG - chr7_2:54059689-54059708 Msa1062920:CDS 25.0%
! TGTAAAGCGACATATAATTT+GGG - chr7_2:54059690-54059709 Msa1062920:CDS 25.0%
!!! GAATCCAATTTCATTTTGAT+GGG - chr7_2:54059784-54059803 Msa1062920:intron 25.0%
! ATAACCCATCAAAATGAAAT+TGG + chr7_2:54059791-54059810 None:intergenic 25.0%
!!! ATTTTGATGGGTTATTTTTG+TGG - chr7_2:54059796-54059815 Msa1062920:intron 25.0%
! AAAAAATTATCATATCCAGG+TGG + chr7_2:54059993-54060012 None:intergenic 25.0%
! TGGAAAAAATTATCATATCC+AGG + chr7_2:54059996-54060015 None:intergenic 25.0%
! AAGATCCTTAAATCATATGA+TGG - chr7_2:54060020-54060039 Msa1062920:intron 25.0%
! TACTTCCATCATATGATTTA+AGG + chr7_2:54060028-54060047 None:intergenic 25.0%
! ATAACCAGTCTTTATTGAAA+TGG - chr7_2:54060156-54060175 Msa1062920:intron 25.0%
! TTTACCATTTCAATAAAGAC+TGG + chr7_2:54060163-54060182 None:intergenic 25.0%
! TCTTTATTGAAATGGTAAAC+TGG - chr7_2:54060164-54060183 Msa1062920:intron 25.0%
!!! TTGTTTTGGGTGAATAAAAT+TGG - chr7_2:54060295-54060314 Msa1062920:intron 25.0%
! TTTCTATTTATAAATGCTGG+TGG - chr7_2:54060411-54060430 Msa1062920:CDS 25.0%
! TATATTATTTACATGCAGGT+TGG - chr7_2:54060562-54060581 Msa1062920:intron 25.0%
! ACTTAAAAAACATATGGTTG+GGG + chr7_2:54061066-54061085 None:intergenic 25.0%
! CAAATGTAAGAACAAGAAAA+AGG + chr7_2:54061117-54061136 None:intergenic 25.0%
!! ATGGCATATATTTCTCTTTT+TGG - chr7_2:54061274-54061293 Msa1062920:intron 25.0%
!! TGGCATATATTTCTCTTTTT+GGG - chr7_2:54061275-54061294 Msa1062920:intron 25.0%
!! GTATGATTATTTTCAATTCC+AGG - chr7_2:54061595-54061614 Msa1062920:CDS 25.0%
! TATGAAATTCATACTTGCAA+CGG + chr7_2:54062050-54062069 None:intergenic 25.0%
! TGATATCTCGTATTATGAAT+AGG - chr7_2:54062101-54062120 Msa1062920:intron 25.0%
! TGTTAGAACTAATAGGAAAA+TGG + chr7_2:54062166-54062185 None:intergenic 25.0%
!!! AATACTTTGAAGTACTTGAT+TGG - chr7_2:54062505-54062524 Msa1062920:intron 25.0%
! TACCTCTATAGATATTCTAT+GGG - chr7_2:54062549-54062568 Msa1062920:intron 25.0%
!!! TGTTAATTGGTTTTGTACTT+AGG - chr7_2:54062669-54062688 Msa1062920:intron 25.0%
! TGAATATGAGTTCTCATATT+GGG - chr7_2:54062747-54062766 Msa1062920:intron 25.0%
!! TATGTCTTTCCTATTTTCTT+AGG - chr7_2:54062980-54062999 Msa1062920:intron 25.0%
! ATCAAAGGCAGATATTTAAA+AGG + chr7_2:54063130-54063149 None:intergenic 25.0%
! TAAAATAAGCTAATCCAAAC+GGG + chr7_2:54063257-54063276 None:intergenic 25.0%
! CTAAAATAAGCTAATCCAAA+CGG + chr7_2:54063258-54063277 None:intergenic 25.0%
!! ATGAAGATACAATTTTCGTT+AGG - chr7_2:54063342-54063361 Msa1062920:intron 25.0%
!! TGAAGATACAATTTTCGTTA+GGG - chr7_2:54063343-54063362 Msa1062920:intron 25.0%
! CATAGCAAAAATTAAATTGG+CGG - chr7_2:54063468-54063487 Msa1062920:intron 25.0%
! ATAGCAAAAATTAAATTGGC+GGG - chr7_2:54063469-54063488 Msa1062920:intron 25.0%
!! ATTTATGTTTGCCTTATTGT+TGG - chr7_2:54063519-54063538 Msa1062920:intron 25.0%
!!! ATCTTATTGATTTCGCAATA+TGG + chr7_2:54063701-54063720 None:intergenic 25.0%
!! CAATAAGATTTTCTCTAAGT+TGG - chr7_2:54063712-54063731 Msa1062920:intron 25.0%
!! CTATCACCTAAACAAATTTT+TGG + chr7_2:54063773-54063792 None:intergenic 25.0%
! ACAAAATTCAACAATAGTCT+GGG + chr7_2:54063891-54063910 None:intergenic 25.0%
! ATCACAATTTAAAAAGAAGG+GGG + chr7_2:54063971-54063990 None:intergenic 25.0%
! ATACATTAATAAGGTAAAGG+GGG + chr7_2:54064014-54064033 None:intergenic 25.0%
! GATACATTAATAAGGTAAAG+GGG + chr7_2:54064015-54064034 None:intergenic 25.0%
! GAGATACATTAATAAGGTAA+AGG + chr7_2:54064017-54064036 None:intergenic 25.0%
! GCATTAGAGATACATTAATA+AGG + chr7_2:54064023-54064042 None:intergenic 25.0%
! TTATTAATTTCTGAATGTGC+AGG - chr7_2:54064046-54064065 Msa1062920:intron 25.0%
! TCTATTATCTCTTTGTTAGT+CGG + chr7_2:54064245-54064264 None:intergenic 25.0%
!! AATCACAACAGAAATCTTTT+TGG + chr7_2:54064437-54064456 None:intergenic 25.0%
!!! ATTTTAGAAGGATTCAAATG+AGG - chr7_2:54064731-54064750 Msa1062920:intron 25.0%
!! CTGCTAATACACTTATATTT+TGG - chr7_2:54064852-54064871 Msa1062920:intron 25.0%
!!! ACTTATATTTTGGCTTTCAA+GGG - chr7_2:54064862-54064881 Msa1062920:intron 25.0%
! ATACCTAATATATGATCTGA+TGG - chr7_2:54064972-54064991 Msa1062920:intron 25.0%
! GCAAATAAAATTACACCTAA+GGG + chr7_2:54065102-54065121 None:intergenic 25.0%
! TGCAAATAAAATTACACCTA+AGG + chr7_2:54065103-54065122 None:intergenic 25.0%
!!! TATAGCTATTGTTTCTATAG+TGG - chr7_2:54065292-54065311 Msa1062920:intron 25.0%
! AGTATTTCACACATTAAAGT+GGG - chr7_2:54065541-54065560 Msa1062920:intron 25.0%
!! ATTTTAAATAGACCATGTTG+TGG - chr7_2:54065646-54065665 Msa1062920:CDS 25.0%
!! CCAAACATAAAATTGATTTC+AGG + chr7_2:54065708-54065727 None:intergenic 25.0%
!! CCTGAAATCAATTTTATGTT+TGG - chr7_2:54065705-54065724 Msa1062920:CDS 25.0%
! TCCTTACTATATATATGACA+TGG - chr7_2:54065919-54065938 Msa1062920:intron 25.0%
! TCCATGTCATATATATAGTA+AGG + chr7_2:54065923-54065942 None:intergenic 25.0%
! TAACCAATATTTCAATCATG+TGG - chr7_2:54066246-54066265 Msa1062920:intron 25.0%
!! CATGTGGCTTTTATTATTTA+AGG - chr7_2:54066262-54066281 Msa1062920:intron 25.0%
! GATATTAAGATTGCTATAGA+AGG + chr7_2:54066371-54066390 None:intergenic 25.0%
! AAGAAAAAGGAAATACTATG+TGG + chr7_2:54066507-54066526 None:intergenic 25.0%
! ACAAAATAAACTGAATGAGT+TGG + chr7_2:54066908-54066927 None:intergenic 25.0%
! GAATATCTACAATGTATGTT+TGG - chr7_2:54066937-54066956 Msa1062920:intron 25.0%
!! AATGTATGTTTGGAATATCA+GGG - chr7_2:54066947-54066966 Msa1062920:intron 25.0%
! AAATAGGACAATTGGTTATT+TGG - chr7_2:54067057-54067076 Msa1062920:intron 25.0%
! TGGTTGAAGTTATAGTATTT+AGG + chr7_2:54067166-54067185 None:intergenic 25.0%
! TTCTTGCTTCATTATAGAAT+AGG - chr7_2:54067227-54067246 Msa1062920:intron 25.0%
! AAATTCTATTATGTCTAGTC+AGG - chr7_2:54067250-54067269 Msa1062920:intron 25.0%
! GAACTAAAAAAACATGACAA+GGG + chr7_2:54067476-54067495 None:intergenic 25.0%
! TGAACTAAAAAAACATGACA+AGG + chr7_2:54067477-54067496 None:intergenic 25.0%
!!! TTGTAAGTATTGAAGTCATT+GGG + chr7_2:54067647-54067666 None:intergenic 25.0%
! AAATTCAAAATCAAAGGAGT+TGG + chr7_2:54067682-54067701 None:intergenic 25.0%
! ATACAAAATCAGAGAGAAAA+AGG + chr7_2:54067705-54067724 None:intergenic 25.0%
! TATGTTGAAAGATAGATCAA+AGG - chr7_2:54067940-54067959 Msa1062920:intron 25.0%
! ATGTTGAAAGATAGATCAAA+GGG - chr7_2:54067941-54067960 Msa1062920:intron 25.0%
!! AGATTCAAGTTTCATTACAT+TGG - chr7_2:54068189-54068208 Msa1062920:five_prime_UTR 25.0%
! CCAAATTAATATTCACATAC+AGG + chr7_2:54068226-54068245 None:intergenic 25.0%
! CCTGTATGTGAATATTAATT+TGG - chr7_2:54068223-54068242 Msa1062920:five_prime_UTR 25.0%
CTTGTATAATTCTAGTAGGT+AGG - chr7_2:54058206-54058225 Msa1062920:three_prime_UTR 30.0%
!!! TTCAGGTTTGTTGTTTTTGA+AGG - chr7_2:54058335-54058354 Msa1062920:three_prime_UTR 30.0%
!!! TCAGGTTTGTTGTTTTTGAA+GGG - chr7_2:54058336-54058355 Msa1062920:three_prime_UTR 30.0%
!!! AGGAGAATTTTTTGGTACAT+AGG - chr7_2:54058650-54058669 Msa1062920:intron 30.0%
!!! GGAGAATTTTTTGGTACATA+GGG - chr7_2:54058651-54058670 Msa1062920:intron 30.0%
ATAACACGGCATTAAATGAT+TGG - chr7_2:54058752-54058771 Msa1062920:CDS 30.0%
! TTGATAATATGAATTGGTGC+AGG - chr7_2:54058806-54058825 Msa1062920:intron 30.0%
TTATAGATACCGTCTTATGT+AGG - chr7_2:54058837-54058856 Msa1062920:intron 30.0%
TATTTGAATTGTATTGTGGC+GGG - chr7_2:54058866-54058885 Msa1062920:intron 30.0%
GTGTGTAATGACAATTTCTA+TGG - chr7_2:54058905-54058924 Msa1062920:intron 30.0%
CACACAGTATCAAACATAAA+AGG + chr7_2:54059111-54059130 None:intergenic 30.0%
! CTTTTATGTTTGATACTGTG+TGG - chr7_2:54059109-54059128 Msa1062920:intron 30.0%
TGGTTTATGATCGAACATTA+TGG - chr7_2:54059129-54059148 Msa1062920:intron 30.0%
TTGTTTGATACTGTCATGAT+TGG - chr7_2:54059210-54059229 Msa1062920:intron 30.0%
! TCATGATTGGTGATTTAAGT+TGG - chr7_2:54059223-54059242 Msa1062920:intron 30.0%
CGCTATTTAACAACATTGAT+TGG - chr7_2:54059440-54059459 Msa1062920:intron 30.0%
CTGTCCCATATCATTTATTA+CGG + chr7_2:54059587-54059606 None:intergenic 30.0%
AAATGACATACAATTTGGGA+CGG - chr7_2:54059729-54059748 Msa1062920:CDS 30.0%
!! AGGGAGTAGTTATTTTCATA+AGG - chr7_2:54059752-54059771 Msa1062920:intron 30.0%
! GGAATCCAATTTCATTTTGA+TGG - chr7_2:54059783-54059802 Msa1062920:intron 30.0%
TGAACGAAAATGTATAGCTT+TGG + chr7_2:54059867-54059886 None:intergenic 30.0%
AACGTGAAGAAAGAAAGAAA+CGG - chr7_2:54059922-54059941 Msa1062920:intron 30.0%
AATAAAGCAAATAGCATCTG+AGG + chr7_2:54060237-54060256 None:intergenic 30.0%
! CAAGCATTTTGTGTTCTTTT+GGG - chr7_2:54060339-54060358 Msa1062920:intron 30.0%
! AAGCATTTTGTGTTCTTTTG+GGG - chr7_2:54060340-54060359 Msa1062920:intron 30.0%
CTCTGCATTATGTATTTGAT+AGG + chr7_2:54060388-54060407 None:intergenic 30.0%
CTATCAAATACATAATGCAG+AGG - chr7_2:54060386-54060405 Msa1062920:intron 30.0%
! CTAAATGAGTATCTTTTACC+AGG + chr7_2:54060675-54060694 None:intergenic 30.0%
! ATACATCAACAGAGAGTTTT+AGG - chr7_2:54060702-54060721 Msa1062920:intron 30.0%
! TACATCAACAGAGAGTTTTA+GGG - chr7_2:54060703-54060722 Msa1062920:intron 30.0%
!! TCATATAAGTTTTAGTACGG+TGG - chr7_2:54060760-54060779 Msa1062920:intron 30.0%
TCTTTCTTTAGATCTGATAC+TGG + chr7_2:54061003-54061022 None:intergenic 30.0%
AGTATCAGATCTAAAGAAAG+AGG - chr7_2:54061002-54061021 Msa1062920:intron 30.0%
GTATCAGATCTAAAGAAAGA+GGG - chr7_2:54061003-54061022 Msa1062920:intron 30.0%
TGATTGACAGATGAATTATC+AGG + chr7_2:54061188-54061207 None:intergenic 30.0%
! GGCATATATTTCTCTTTTTG+GGG - chr7_2:54061276-54061295 Msa1062920:intron 30.0%
!!! TATATTTCTCTTTTTGGGGT+AGG - chr7_2:54061280-54061299 Msa1062920:intron 30.0%
ACGATAAAAATTGTCTAACC+TGG + chr7_2:54061616-54061635 None:intergenic 30.0%
ATACTTGTTCATTGTACACA+TGG - chr7_2:54061659-54061678 Msa1062920:CDS 30.0%
!! TGTTTGTTTTCCTTCTTTAC+AGG - chr7_2:54061815-54061834 Msa1062920:intron 30.0%
! ATTTTTATCGCCTGTAAAGA+AGG + chr7_2:54061828-54061847 None:intergenic 30.0%
!! TTCCTATTAGTTCTAACACA+TGG - chr7_2:54062168-54062187 Msa1062920:intron 30.0%
AACCATGTGTTAGAACTAAT+AGG + chr7_2:54062173-54062192 None:intergenic 30.0%
!! ATTAGTTCTAACACATGGTT+TGG - chr7_2:54062173-54062192 Msa1062920:intron 30.0%
!! TTAGTTCTAACACATGGTTT+GGG - chr7_2:54062174-54062193 Msa1062920:intron 30.0%
!! TCTAATTGTTTCTACCTTGT+AGG - chr7_2:54062336-54062355 Msa1062920:intron 30.0%
!! CTAATTGTTTCTACCTTGTA+GGG - chr7_2:54062337-54062356 Msa1062920:intron 30.0%
! TGATTGGATTAGAGTAAAAG+TGG - chr7_2:54062521-54062540 Msa1062920:intron 30.0%
! GATTGGATTAGAGTAAAAGT+GGG - chr7_2:54062522-54062541 Msa1062920:intron 30.0%
CTACCTCTATAGATATTCTA+TGG - chr7_2:54062548-54062567 Msa1062920:intron 30.0%
TATAGATATTCTATGGGACA+TGG - chr7_2:54062555-54062574 Msa1062920:intron 30.0%
!!! TTTTGCTCATGACTTTTTCA+AGG - chr7_2:54062609-54062628 Msa1062920:intron 30.0%
!!! TTTGCTCATGACTTTTTCAA+GGG - chr7_2:54062610-54062629 Msa1062920:intron 30.0%
TACAAAACCAATTAACAACC+AGG + chr7_2:54062666-54062685 None:intergenic 30.0%
CTGAATATGAGTTCTCATAT+TGG - chr7_2:54062746-54062765 Msa1062920:intron 30.0%
GACTCGTGTTCTATAAATAT+GGG + chr7_2:54062784-54062803 None:intergenic 30.0%
TGACTCGTGTTCTATAAATA+TGG + chr7_2:54062785-54062804 None:intergenic 30.0%
AACAGAATAGAGAAATAGTC+CGG - chr7_2:54062864-54062883 Msa1062920:intron 30.0%
!!! TAACTGTTTAGTTTTTCTCG+AGG + chr7_2:54062911-54062930 None:intergenic 30.0%
!! TATCGAATCATTTTTCCTGA+TGG - chr7_2:54062945-54062964 Msa1062920:intron 30.0%
TCATTATTGTGTCAATCTCA+TGG + chr7_2:54063010-54063029 None:intergenic 30.0%
! AATGACAAACGATGATGTTT+TGG - chr7_2:54063025-54063044 Msa1062920:intron 30.0%
! ATGACAAACGATGATGTTTT+GGG - chr7_2:54063026-54063045 Msa1062920:intron 30.0%
TGCTTTCAGATACTCAAATT+GGG - chr7_2:54063092-54063111 Msa1062920:intron 30.0%
ATACTAATCTCACACATCAA+AGG + chr7_2:54063145-54063164 None:intergenic 30.0%
TGATGTGTGAGATTAGTATT+TGG - chr7_2:54063146-54063165 Msa1062920:intron 30.0%
! CTTCACTACTTGTTTGTTAA+GGG - chr7_2:54063231-54063250 Msa1062920:CDS 30.0%
CAAAATAAGCTCAAACCAAA+CGG - chr7_2:54063434-54063453 Msa1062920:intron 30.0%
AAAATAAGCTCAAACCAAAC+GGG - chr7_2:54063435-54063454 Msa1062920:intron 30.0%
TAGCAAAAATTAAATTGGCG+GGG - chr7_2:54063470-54063489 Msa1062920:intron 30.0%
CACAATTGTAACCAACAATA+AGG + chr7_2:54063533-54063552 None:intergenic 30.0%
! TTGTTATTCCATGTTTGTAG+AGG - chr7_2:54063587-54063606 Msa1062920:intron 30.0%
CATTAAAACCTCTACAAACA+TGG + chr7_2:54063598-54063617 None:intergenic 30.0%
! GTTTGGCCAAAAATTTGTTT+AGG - chr7_2:54063764-54063783 Msa1062920:intron 30.0%
! TGTATACAATTTTGCTTCCT+AGG + chr7_2:54063844-54063863 None:intergenic 30.0%
CACAAAATTCAACAATAGTC+TGG + chr7_2:54063892-54063911 None:intergenic 30.0%
AACCTTAACTTCTGATAACA+TGG - chr7_2:54063930-54063949 Msa1062920:intron 30.0%
AACCATGTTATCAGAAGTTA+AGG + chr7_2:54063935-54063954 None:intergenic 30.0%
AAATGAACCATTCATTCTGA+AGG + chr7_2:54064379-54064398 None:intergenic 30.0%
ATGATGCTAATAACTATGGA+TGG - chr7_2:54064682-54064701 Msa1062920:CDS 30.0%
!!! CACTTATATTTTGGCTTTCA+AGG - chr7_2:54064861-54064880 Msa1062920:intron 30.0%
!!! AATACTTGCTGTTCTCATTT+TGG - chr7_2:54065049-54065068 Msa1062920:intron 30.0%
AAAGAAGAAACTGCTATGTA+AGG + chr7_2:54065243-54065262 None:intergenic 30.0%
CAGTATTTCACACATTAAAG+TGG - chr7_2:54065540-54065559 Msa1062920:intron 30.0%
!! TTTATTTTTCACCTGGTAGT+TGG - chr7_2:54065993-54066012 Msa1062920:intron 30.0%
TATATCAATAACCAACTACC+AGG + chr7_2:54066007-54066026 None:intergenic 30.0%
! ATATCTGAAATGATTAGGTG+AGG - chr7_2:54066026-54066045 Msa1062920:intron 30.0%
AAGCCACATGATTGAAATAT+TGG + chr7_2:54066252-54066271 None:intergenic 30.0%
! CATCTTATTTAGCATGAGAA+TGG - chr7_2:54066334-54066353 Msa1062920:CDS 30.0%
ATATACGATGTCTCTTTAAC+TGG + chr7_2:54066403-54066422 None:intergenic 30.0%
AAAGGAAATACTATGTGGTA+AGG + chr7_2:54066502-54066521 None:intergenic 30.0%
TACTAACAATGTTTACGATC+AGG - chr7_2:54066559-54066578 Msa1062920:intron 30.0%
ACTAACAATGTTTACGATCA+GGG - chr7_2:54066560-54066579 Msa1062920:intron 30.0%
!! TTCAGTTGATTTTCTCTTTG+AGG - chr7_2:54066649-54066668 Msa1062920:intron 30.0%
AGAAGTGACTAAATGATAAG+TGG + chr7_2:54066720-54066739 None:intergenic 30.0%
ACAAACAGCTAGATATTAGT+TGG + chr7_2:54066761-54066780 None:intergenic 30.0%
GAAAAAAGAAACTCATGGAA+GGG - chr7_2:54066830-54066849 Msa1062920:intron 30.0%
! CAATGTATGTTTGGAATATC+AGG - chr7_2:54066946-54066965 Msa1062920:intron 30.0%
! ATCTGAGATTATTGTATCAG+TGG - chr7_2:54066973-54066992 Msa1062920:intron 30.0%
! TCTGAGATTATTGTATCAGT+GGG - chr7_2:54066974-54066993 Msa1062920:intron 30.0%
AAGTTATAGTATTTAGGCAG+GGG + chr7_2:54067160-54067179 None:intergenic 30.0%
GAAGTTATAGTATTTAGGCA+GGG + chr7_2:54067161-54067180 None:intergenic 30.0%
TGAAGTTATAGTATTTAGGC+AGG + chr7_2:54067162-54067181 None:intergenic 30.0%
ACTATAACTTCAACCAACAA+TGG - chr7_2:54067170-54067189 Msa1062920:intron 30.0%
CTATAACTTCAACCAACAAT+GGG - chr7_2:54067171-54067190 Msa1062920:intron 30.0%
! GAAAATCTAAAATCTGCAGA+AGG - chr7_2:54067521-54067540 Msa1062920:intron 30.0%
ATCTTTCCAGAATAAAGCAT+GGG + chr7_2:54067554-54067573 None:intergenic 30.0%
!! CTTGTAAGTATTGAAGTCAT+TGG + chr7_2:54067648-54067667 None:intergenic 30.0%
TGACTTCAATACTTACAAGA+AGG - chr7_2:54067649-54067668 Msa1062920:intron 30.0%
!! AAAATCAAAGGAGTTGGTAA+AGG + chr7_2:54067676-54067695 None:intergenic 30.0%
GTTCATCGTATCATGTAATT+AGG - chr7_2:54068000-54068019 Msa1062920:intron 30.0%
ATCTAGATAACCACAAGAAA+TGG + chr7_2:54068076-54068095 None:intergenic 30.0%
GGTTATCTAGATGAATAGTT+AGG - chr7_2:54068084-54068103 Msa1062920:intron 30.0%
CTAGATGAATAGTTAGGTTT+AGG - chr7_2:54068090-54068109 Msa1062920:intron 30.0%
AGTGGTTACAAATTGTTGAA+AGG - chr7_2:54068153-54068172 Msa1062920:five_prime_UTR 30.0%
GTGGTTACAAATTGTTGAAA+GGG - chr7_2:54068154-54068173 Msa1062920:five_prime_UTR 30.0%
ATGCAGAATAACTTCTACAT+TGG + chr7_2:54068277-54068296 None:intergenic 30.0%
! GAGAGAGAAGTGTAACTATA+AGG + chr7_2:54058102-54058121 None:intergenic 35.0%
!!! CAGGTTTGTTGTTTTTGAAG+GGG - chr7_2:54058337-54058356 Msa1062920:three_prime_UTR 35.0%
! TTGAATGTCGACGTGAATTT+TGG - chr7_2:54058448-54058467 Msa1062920:exon 35.0%
! TATGTGATTTTGTTGGGTGA+AGG - chr7_2:54058537-54058556 Msa1062920:CDS 35.0%
! ATGTGATTTTGTTGGGTGAA+GGG - chr7_2:54058538-54058557 Msa1062920:CDS 35.0%
!! TTTGGTACATAGGGTTTTGA+TGG - chr7_2:54058660-54058679 Msa1062920:intron 35.0%
!! TTGGTACATAGGGTTTTGAT+GGG - chr7_2:54058661-54058680 Msa1062920:intron 35.0%
! TAATTTTCCTTACAGGGTAC+CGG + chr7_2:54058689-54058708 None:intergenic 35.0%
ATAACCACACCTACATAAGA+CGG + chr7_2:54058849-54058868 None:intergenic 35.0%
! GAAGATGAAGATCCTTTTGA+GGG - chr7_2:54058954-54058973 Msa1062920:intron 35.0%
AGAGTATAATGCGCCAAAAA+AGG - chr7_2:54058986-54059005 Msa1062920:intron 35.0%
!! GTGATTTAAGTTGGATACCT+TGG - chr7_2:54059232-54059251 Msa1062920:intron 35.0%
! GCTTTTAGTGTTGTCAATTG+TGG - chr7_2:54059284-54059303 Msa1062920:intron 35.0%
! GTCATACAATTTGGGACAAA+GGG + chr7_2:54059482-54059501 None:intergenic 35.0%
! TCCCAAATTGTATGACGTTT+TGG - chr7_2:54059486-54059505 Msa1062920:CDS 35.0%
CCCAAAACGTCATACAATTT+GGG + chr7_2:54059490-54059509 None:intergenic 35.0%
! CCCAAATTGTATGACGTTTT+GGG - chr7_2:54059487-54059506 Msa1062920:CDS 35.0%
GATATGGGACAGATAAATGA+AGG - chr7_2:54059595-54059614 Msa1062920:intron 35.0%
!! TGACTGTATTTTGTTGTGCA+AGG - chr7_2:54059825-54059844 Msa1062920:intron 35.0%
!!! CTAAACTCCTGCTTTGTTTT+AGG - chr7_2:54059899-54059918 Msa1062920:intron 35.0%
ACACAAAATGCTTGCAACTT+TGG + chr7_2:54060333-54060352 None:intergenic 35.0%
! GCAAGCATTTTGTGTTCTTT+TGG - chr7_2:54060338-54060357 Msa1062920:intron 35.0%
!! TTATTTACATGCAGGTTGGT+TGG - chr7_2:54060566-54060585 Msa1062920:intron 35.0%
!! ATACCTTCTAAGGTTCCATT+GGG - chr7_2:54060624-54060643 Msa1062920:intron 35.0%
AGGTAAAATATCGTCAGTGA+AGG + chr7_2:54060655-54060674 None:intergenic 35.0%
! TTCACTGACGATATTTTACC+TGG - chr7_2:54060654-54060673 Msa1062920:intron 35.0%
!! AAGCATGTTAAGGTTTGTTG+TGG - chr7_2:54061030-54061049 Msa1062920:intron 35.0%
AAAGGAGCCCACTTATATAA+AGG + chr7_2:54061099-54061118 None:intergenic 35.0%
GTTCTTACATTTGAGCATCA+TGG - chr7_2:54061124-54061143 Msa1062920:intron 35.0%
ATATCACAAATCCCTATGAC+TGG + chr7_2:54061357-54061376 None:intergenic 35.0%
ACTATGAAGTCAAGATAGCA+GGG + chr7_2:54061421-54061440 None:intergenic 35.0%
ACATTGTGCGCATTAGATAA+TGG + chr7_2:54061712-54061731 None:intergenic 35.0%
AATGTCAATGTCTGTTACTC+AGG - chr7_2:54061727-54061746 Msa1062920:intron 35.0%
TACTCAGGTTTATAGATTCC+TGG + chr7_2:54061870-54061889 None:intergenic 35.0%
ACCATTGAGATCAACAAGTT+CGG + chr7_2:54061976-54061995 None:intergenic 35.0%
TCATCATCGTCATCATTATC+TGG + chr7_2:54062008-54062027 None:intergenic 35.0%
! AATGATGACGATGATGATGA+TGG - chr7_2:54062011-54062030 Msa1062920:intron 35.0%
! TAACACATGGTTTGGGTTTA+GGG - chr7_2:54062181-54062200 Msa1062920:intron 35.0%
! CTAAAAACTTTCTTTGGGAG+AGG - chr7_2:54062262-54062281 Msa1062920:CDS 35.0%
CTGTATGATGTACGTAACAA+TGG + chr7_2:54062296-54062315 None:intergenic 35.0%
!! TCCTTTGGAATAATATGGTC+TGG - chr7_2:54062369-54062388 Msa1062920:intron 35.0%
TCCAGACCATATTATTCCAA+AGG + chr7_2:54062373-54062392 None:intergenic 35.0%
TGGATGTATTTGCGTAACAA+TGG - chr7_2:54062389-54062408 Msa1062920:intron 35.0%
!! AATAACGGGCCAAAATTTGT+TGG - chr7_2:54062464-54062483 Msa1062920:intron 35.0%
GTCCCATAGAATATCTATAG+AGG + chr7_2:54062554-54062573 None:intergenic 35.0%
TCTTGAACCTGGTTGTTAAT+TGG - chr7_2:54062656-54062675 Msa1062920:intron 35.0%
TTCTGTTAGTGTTAAGCTGT+CGG + chr7_2:54062851-54062870 None:intergenic 35.0%
TTACATAGTCTCTACTGTAC+CGG + chr7_2:54062886-54062905 None:intergenic 35.0%
CATGGTTCTCCTAAGAAAAT+AGG + chr7_2:54062992-54063011 None:intergenic 35.0%
AATGCATCTTGCTGATCATT+AGG + chr7_2:54063062-54063081 None:intergenic 35.0%
ATGATCAGCAAGATGCATTT+CGG - chr7_2:54063063-54063082 Msa1062920:intron 35.0%
CTGCTTTCAGATACTCAAAT+TGG - chr7_2:54063091-54063110 Msa1062920:intron 35.0%
GCTTTCAGATACTCAAATTG+GGG - chr7_2:54063093-54063112 Msa1062920:intron 35.0%
CTTTCAGATACTCAAATTGG+GGG - chr7_2:54063094-54063113 Msa1062920:intron 35.0%
! GATCTTTTTGTGATGACAAG+TGG - chr7_2:54063168-54063187 Msa1062920:intron 35.0%
! GCTTCACTACTTGTTTGTTA+AGG - chr7_2:54063230-54063249 Msa1062920:CDS 35.0%
AACCATGAATCGCAAAATTC+TGG + chr7_2:54063650-54063669 None:intergenic 35.0%
! ATGGTTGCTTTACCTTTACT+GGG - chr7_2:54063664-54063683 Msa1062920:intron 35.0%
ATTTCGCAATATGGTTACAG+AGG + chr7_2:54063692-54063711 None:intergenic 35.0%
TGTTAATGGCTCAGATAAGT+TGG + chr7_2:54064123-54064142 None:intergenic 35.0%
TACAAAGTAACTGCAGTCTT+AGG + chr7_2:54064184-54064203 None:intergenic 35.0%
AGCTAGGGATAATGTATTTC+TGG + chr7_2:54064339-54064358 None:intergenic 35.0%
!!! AATTTTGTTGCTTTGCAAGC+AGG - chr7_2:54064593-54064612 Msa1062920:intron 35.0%
!!! ATTTTGTTGCTTTGCAAGCA+GGG - chr7_2:54064594-54064613 Msa1062920:intron 35.0%
ACCACTTCACATTACTTGAT+GGG - chr7_2:54064902-54064921 Msa1062920:intron 35.0%
AGTGCCAAATTCAAAAAAGC+AGG - chr7_2:54064942-54064961 Msa1062920:intron 35.0%
!!! CTTGCCTGCTTTTTTGAATT+TGG + chr7_2:54064949-54064968 None:intergenic 35.0%
CAAATTCAAAAAAGCAGGCA+AGG - chr7_2:54064947-54064966 Msa1062920:intron 35.0%
CCTAATATATGATCTGATGG+CGG - chr7_2:54064975-54064994 Msa1062920:intron 35.0%
TTGTTCATAATCATGCCCTT+AGG - chr7_2:54065084-54065103 Msa1062920:intron 35.0%
GTATGCTGTCTAGAAAAACA+GGG + chr7_2:54065202-54065221 None:intergenic 35.0%
AAGGTCATAAAAGAAACAGC+TGG + chr7_2:54065224-54065243 None:intergenic 35.0%
GGATTTAGTCCTTTAGTTGA+GGG - chr7_2:54065472-54065491 Msa1062920:intron 35.0%
TGGTTAATCTGGTACAAACT+TGG - chr7_2:54065811-54065830 Msa1062920:intron 35.0%
TATAGTAAGGATGTTTGCGA+TGG + chr7_2:54065910-54065929 None:intergenic 35.0%
!!! CTTGAGCTTTATTTTTCACC+TGG - chr7_2:54065986-54066005 Msa1062920:intron 35.0%
!! TTAAGGTATTTTTCCCCCAT+TGG - chr7_2:54066279-54066298 Msa1062920:intron 35.0%
GTAAGGAGGACATAAATGAA+TGG + chr7_2:54066485-54066504 None:intergenic 35.0%
GTAACATGAGGGAAAGAAAA+AGG + chr7_2:54066520-54066539 None:intergenic 35.0%
CATTCACTTCAGTAACATGA+GGG + chr7_2:54066531-54066550 None:intergenic 35.0%
TAGATATTAGTTGGATGCAC+CGG + chr7_2:54066752-54066771 None:intergenic 35.0%
!!! CTACTTTTTCTCTATGAACG+TGG - chr7_2:54066808-54066827 Msa1062920:intron 35.0%
ACGTGGAAAAAAGAAACTCA+TGG - chr7_2:54066825-54066844 Msa1062920:intron 35.0%
GGAAAAAAGAAACTCATGGA+AGG - chr7_2:54066829-54066848 Msa1062920:intron 35.0%
GGGTTTATTGTTGCATTCAA+AGG - chr7_2:54066850-54066869 Msa1062920:intron 35.0%
TATTGTTGCATTCAAAGGTC+AGG - chr7_2:54066855-54066874 Msa1062920:intron 35.0%
! ATAAACTGAATGAGTTGGAC+AGG + chr7_2:54066903-54066922 None:intergenic 35.0%
AATATTACAAGCCCAAGTAC+AGG + chr7_2:54067000-54067019 None:intergenic 35.0%
! ATTTGTTTCTCAGTACCTAC+AGG - chr7_2:54067283-54067302 Msa1062920:CDS 35.0%
AAATAAGCATGTGAACCTGT+AGG + chr7_2:54067301-54067320 None:intergenic 35.0%
TACAGGTTCACATGCTTATT+TGG - chr7_2:54067300-54067319 Msa1062920:CDS 35.0%
AATTTCCATACCCAACTTTC+TGG + chr7_2:54067375-54067394 None:intergenic 35.0%
AGAAAGTTGGGTATGGAAAT+TGG - chr7_2:54067374-54067393 Msa1062920:CDS 35.0%
TCTTTCCAGAATAAAGCATG+GGG + chr7_2:54067553-54067572 None:intergenic 35.0%
GATCTTTCCAGAATAAAGCA+TGG + chr7_2:54067555-54067574 None:intergenic 35.0%
CTATTTGCTCAATATGTTGC+AGG - chr7_2:54067735-54067754 Msa1062920:intron 35.0%
CATAAAAGACAATATCACCG+AGG - chr7_2:54067768-54067787 Msa1062920:intron 35.0%
TCTCGTTTATTTCAGTCAAC+AGG + chr7_2:54067798-54067817 None:intergenic 35.0%
AGGATAAGAATCGATAGCAA+AGG - chr7_2:54067844-54067863 Msa1062920:intron 35.0%
TTTGGATGATGTTCATTTGC+AGG + chr7_2:54067979-54067998 None:intergenic 35.0%
TGCAAATGAACATCATCCAA+AGG - chr7_2:54067978-54067997 Msa1062920:five_prime_UTR 35.0%
TACATGATACGATGAACCTT+TGG + chr7_2:54067997-54068016 None:intergenic 35.0%
TAACCACAAGAAATGGTTTC+AGG + chr7_2:54068069-54068088 None:intergenic 35.0%
AGAGAGAAACAGTGACAGTT+AGG + chr7_2:54058130-54058149 None:intergenic 40.0%
TGTTTCTCTCTCTCTCTCTA+GGG - chr7_2:54058139-54058158 Msa1062920:three_prime_UTR 40.0%
! TTTGAAGTTTGCGTGGTTTG+AGG - chr7_2:54058362-54058381 Msa1062920:three_prime_UTR 40.0%
AGTTGTTGGGATGATTTACG+AGG - chr7_2:54058500-54058519 Msa1062920:CDS 40.0%
GTTGTTGGGATGATTTACGA+GGG - chr7_2:54058501-54058520 Msa1062920:CDS 40.0%
TGTTGGGTGAAGGGTAAATT+TGG - chr7_2:54058547-54058566 Msa1062920:CDS 40.0%
GTTGGGTGAAGGGTAAATTT+GGG - chr7_2:54058548-54058567 Msa1062920:CDS 40.0%
GTGCATGCTGGCATAATAAT+AGG - chr7_2:54058782-54058801 Msa1062920:CDS 40.0%
AAAGGATCTTCATCTTCCTC+CGG + chr7_2:54058951-54058970 None:intergenic 40.0%
! GGAAGATGAAGATCCTTTTG+AGG - chr7_2:54058953-54058972 Msa1062920:intron 40.0%
!! AATAGAGAAGAAAGGGTACC+CGG + chr7_2:54059073-54059092 None:intergenic 40.0%
AAATCCTTATCCCACTAAGC+CGG + chr7_2:54059179-54059198 None:intergenic 40.0%
ACTACAATCACAGTGTTCCA+AGG + chr7_2:54059252-54059271 None:intergenic 40.0%
GTGTTGTCAATTGTGGATTC+CGG - chr7_2:54059291-54059310 Msa1062920:intron 40.0%
! TTGAACCAACCACTGTTTTC+CGG + chr7_2:54059313-54059332 None:intergenic 40.0%
!! GCTATAGTGCTGATGCATAA+CGG + chr7_2:54059420-54059439 None:intergenic 40.0%
! CGTCATACAATTTGGGACAA+AGG + chr7_2:54059483-54059502 None:intergenic 40.0%
GCCCAAAACGTCATACAATT+TGG + chr7_2:54059491-54059510 None:intergenic 40.0%
TCACGTTCCTAAAACAAAGC+AGG + chr7_2:54059909-54059928 None:intergenic 40.0%
GTATCATGCCGAAAATTTCC+TGG + chr7_2:54060608-54060627 None:intergenic 40.0%
TTTCGGCATGATACCTTCTA+AGG - chr7_2:54060614-54060633 Msa1062920:intron 40.0%
!! GATACCTTCTAAGGTTCCAT+TGG - chr7_2:54060623-54060642 Msa1062920:intron 40.0%
! CACAATCTATTTTGCACCCT+TGG - chr7_2:54060886-54060905 Msa1062920:intron 40.0%
AGTCAAATGAACCAAGCCAA+GGG + chr7_2:54060905-54060924 None:intergenic 40.0%
!! AGAGGGTATCAAGCATGTTA+AGG - chr7_2:54061020-54061039 Msa1062920:intron 40.0%
AAAACATATGGTTGGGGAGA+AGG + chr7_2:54061060-54061079 None:intergenic 40.0%
ACATTTGAGCATCATGGTTG+TGG - chr7_2:54061130-54061149 Msa1062920:intron 40.0%
TGTGGTTTAGATCCAATGCA+AGG - chr7_2:54061148-54061167 Msa1062920:intron 40.0%
GTGGTTTAGATCCAATGCAA+GGG - chr7_2:54061149-54061168 Msa1062920:intron 40.0%
TGTCAATCACTTTGTGTACG+AGG - chr7_2:54061199-54061218 Msa1062920:intron 40.0%
AATCACTTTGTGTACGAGGT+TGG - chr7_2:54061203-54061222 Msa1062920:intron 40.0%
AGAAACATGCTCCAGTCATA+GGG - chr7_2:54061343-54061362 Msa1062920:CDS 40.0%
CACTATGAAGTCAAGATAGC+AGG + chr7_2:54061422-54061441 None:intergenic 40.0%
CTGCTATCTTGACTTCATAG+TGG - chr7_2:54061420-54061439 Msa1062920:CDS 40.0%
! TGCGAATGCGATGTGATTTT+TGG - chr7_2:54061543-54061562 Msa1062920:intron 40.0%
TCAGGTTTATAGATTCCTGG+AGG + chr7_2:54061867-54061886 None:intergenic 40.0%
CCATTGAGATCAACAAGTTC+GGG + chr7_2:54061975-54061994 None:intergenic 40.0%
GAAATTCATACTTGCAACGG+AGG + chr7_2:54062047-54062066 None:intergenic 40.0%
! CTAACACATGGTTTGGGTTT+AGG - chr7_2:54062180-54062199 Msa1062920:intron 40.0%
! AACACATGGTTTGGGTTTAG+GGG - chr7_2:54062182-54062201 Msa1062920:intron 40.0%
! AAAACTTTCTTTGGGAGAGG+TGG - chr7_2:54062265-54062284 Msa1062920:intron 40.0%
! AAACTTTCTTTGGGAGAGGT+GGG - chr7_2:54062266-54062285 Msa1062920:intron 40.0%
CAGCTTGAGTTCAAAAACAG+TGG - chr7_2:54062313-54062332 Msa1062920:intron 40.0%
!! ATTGTTTCTACCTTGTAGGG+TGG - chr7_2:54062340-54062359 Msa1062920:intron 40.0%
! AGCACACTGCCAACAAATTT+TGG + chr7_2:54062476-54062495 None:intergenic 40.0%
CTGTCATAGGTAGATGTAGT+TGG + chr7_2:54062821-54062840 None:intergenic 40.0%
GGTACAGTAGAGACTATGTA+AGG - chr7_2:54062885-54062904 Msa1062920:intron 40.0%
TATGCAATTTAGGTCCCGTT+TGG + chr7_2:54063452-54063471 None:intergenic 40.0%
TACAATTGTGCGCTTAGACA+TGG - chr7_2:54063543-54063562 Msa1062920:intron 40.0%
! AGCCAGAATTTTGCGATTCA+TGG - chr7_2:54063645-54063664 Msa1062920:intron 40.0%
! CATGGTTGCTTTACCTTTAC+TGG - chr7_2:54063663-54063682 Msa1062920:intron 40.0%
CAAAAATCAGTGCTTCTCCT+AGG - chr7_2:54063824-54063843 Msa1062920:intron 40.0%
TGGACCTGTCTAAAGAAACT+GGG + chr7_2:54064103-54064122 None:intergenic 40.0%
TTGGACCTGTCTAAAGAAAC+TGG + chr7_2:54064104-54064123 None:intergenic 40.0%
AGAAGATGGAATGCTAGCTA+GGG + chr7_2:54064354-54064373 None:intergenic 40.0%
! TCATTCTGAAGGAGAGAAGA+TGG + chr7_2:54064368-54064387 None:intergenic 40.0%
CTTCTCTCCTTCAGAATGAA+TGG - chr7_2:54064369-54064388 Msa1062920:CDS 40.0%
ATGTTGCATAGTAGTAACGC+TGG + chr7_2:54064639-54064658 None:intergenic 40.0%
AGCGTTACTACTATGCAACA+TGG - chr7_2:54064638-54064657 Msa1062920:CDS 40.0%
TATGCAACATGGAAAGCTGA+TGG - chr7_2:54064649-54064668 Msa1062920:CDS 40.0%
TTCAAATGAGGTTTCCATGC+AGG - chr7_2:54064743-54064762 Msa1062920:intron 40.0%
TCAAATGAGGTTTCCATGCA+GGG - chr7_2:54064744-54064763 Msa1062920:intron 40.0%
GGTTGCAAATGATGTATGTG+TGG - chr7_2:54064765-54064784 Msa1062920:intron 40.0%
AGTGGAAGCTTCTGAATATG+TGG - chr7_2:54064825-54064844 Msa1062920:intron 40.0%
!!! TATTTTGGCTTTCAAGGGCT+TGG - chr7_2:54064867-54064886 Msa1062920:intron 40.0%
CACCACTTCACATTACTTGA+TGG - chr7_2:54064901-54064920 Msa1062920:intron 40.0%
CCACTTCACATTACTTGATG+GGG - chr7_2:54064903-54064922 Msa1062920:intron 40.0%
CCGCCATCAGATCATATATT+AGG + chr7_2:54064978-54064997 None:intergenic 40.0%
GGTATGCTGTCTAGAAAAAC+AGG + chr7_2:54065203-54065222 None:intergenic 40.0%
! GCTAAGTTGACAGGAACTTT+GGG + chr7_2:54065406-54065425 None:intergenic 40.0%
! AGCTAAGTTGACAGGAACTT+TGG + chr7_2:54065407-54065426 None:intergenic 40.0%
! ACACAATCAGCTAAGTTGAC+AGG + chr7_2:54065415-54065434 None:intergenic 40.0%
AGCTGATTGTGTGAACTTGT+TGG - chr7_2:54065423-54065442 Msa1062920:intron 40.0%
GGGATTTAGTCCTTTAGTTG+AGG - chr7_2:54065471-54065490 Msa1062920:intron 40.0%
TTCACACATTAAAGTGGGAG+AGG - chr7_2:54065546-54065565 Msa1062920:intron 40.0%
TCACACATTAAAGTGGGAGA+GGG - chr7_2:54065547-54065566 Msa1062920:intron 40.0%
ATCTCTATCTTTCTCCACAC+TGG + chr7_2:54065577-54065596 None:intergenic 40.0%
AACTAAAGCACACCACAACA+TGG + chr7_2:54065661-54065680 None:intergenic 40.0%
AGAAAGAAGTGATTGAACCC+AGG - chr7_2:54065870-54065889 Msa1062920:intron 40.0%
TTGAACCCAGGAATCATGAA+CGG - chr7_2:54065882-54065901 Msa1062920:intron 40.0%
TATATGACATGGAGCCTTTC+AGG - chr7_2:54065930-54065949 Msa1062920:intron 40.0%
ATATGACATGGAGCCTTTCA+GGG - chr7_2:54065931-54065950 Msa1062920:intron 40.0%
TCAGAAATGCATACCCTGAA+AGG + chr7_2:54065947-54065966 None:intergenic 40.0%
CAAGCTGTATGCTCAATTTC+AGG + chr7_2:54065970-54065989 None:intergenic 40.0%
! TCTGAAATGATTAGGTGAGG+AGG - chr7_2:54066029-54066048 Msa1062920:intron 40.0%
! AGGTGAGGAGGAAAGATTTT+TGG - chr7_2:54066041-54066060 Msa1062920:intron 40.0%
AGATGGTCTCATATTTCAGG+TGG - chr7_2:54066123-54066142 Msa1062920:intron 40.0%
! GATGGTCTCATATTTCAGGT+GGG - chr7_2:54066124-54066143 Msa1062920:intron 40.0%
! ATATTGGTTACTAGCCAGCT+TGG + chr7_2:54066236-54066255 None:intergenic 40.0%
TGAGGTGATAGAGAACCAAT+GGG + chr7_2:54066297-54066316 None:intergenic 40.0%
TTGAGGTGATAGAGAACCAA+TGG + chr7_2:54066298-54066317 None:intergenic 40.0%
! ATTGGTTCTCTATCACCTCA+AGG - chr7_2:54066297-54066316 Msa1062920:CDS 40.0%
GTATATAGCCTAGCGTATAG+AGG - chr7_2:54066417-54066436 Msa1062920:intron 40.0%
ACATTGATCCTCTATACGCT+AGG + chr7_2:54066428-54066447 None:intergenic 40.0%
AGCTTAGAGTCTGGATACAT+TGG - chr7_2:54066458-54066477 Msa1062920:intron 40.0%
GGAAATACTATGTGGTAAGG+AGG + chr7_2:54066499-54066518 None:intergenic 40.0%
CCATTCACTTCAGTAACATG+AGG + chr7_2:54066532-54066551 None:intergenic 40.0%
CCTCATGTTACTGAAGTGAA+TGG - chr7_2:54066529-54066548 Msa1062920:intron 40.0%
CATGTTACTGAAGTGAATGG+AGG - chr7_2:54066532-54066551 Msa1062920:intron 40.0%
ACAATGTTTACGATCAGGGA+TGG - chr7_2:54066564-54066583 Msa1062920:intron 40.0%
CAATGTTTACGATCAGGGAT+GGG - chr7_2:54066565-54066584 Msa1062920:intron 40.0%
TCATGAGTACGAGGTACATA+AGG + chr7_2:54066596-54066615 None:intergenic 40.0%
TATGTACCTCGTACTCATGA+AGG - chr7_2:54066596-54066615 Msa1062920:intron 40.0%
CTCATGAAGGTCTCTTAAAG+TGG - chr7_2:54066609-54066628 Msa1062920:intron 40.0%
!! AGTCACTTCTAGTTTGTTGC+CGG - chr7_2:54066730-54066749 Msa1062920:intron 40.0%
GAAGCAAGAAATCCCATTGT+TGG + chr7_2:54067186-54067205 None:intergenic 40.0%
TATTATGTCTAGTCAGGTCG+TGG - chr7_2:54067256-54067275 Msa1062920:intron 40.0%
TGCTTATTTGGTCTCGAGAT+TGG - chr7_2:54067312-54067331 Msa1062920:CDS 40.0%
AAAGATCATCGAGTGTGCTT+GGG - chr7_2:54067568-54067587 Msa1062920:intron 40.0%
!! GCTATCGATTCTTATCCTGT+CGG + chr7_2:54067842-54067861 None:intergenic 40.0%
AGTAATCAGTGAGGAACTCA+TGG - chr7_2:54067887-54067906 Msa1062920:intron 40.0%
ATGGTCTGTAAAGCTTTCAC+TGG - chr7_2:54067906-54067925 Msa1062920:intron 40.0%
TCTGTAAAGCTTTCACTGGT+GGG - chr7_2:54067910-54067929 Msa1062920:intron 40.0%
AGATCAAAGGGATCTACTGA+TGG - chr7_2:54067953-54067972 Msa1062920:intron 40.0%
TAATCGACACCGCTCAAATT+CGG - chr7_2:54068042-54068061 Msa1062920:intron 40.0%
TTCTGCATTTACCTCCTTAG+TGG - chr7_2:54068289-54068308 Msa1062920:five_prime_UTR 40.0%
TCCTTAGTGGAAGCTATGTT+GGG - chr7_2:54068302-54068321 Msa1062920:five_prime_UTR 40.0%
! CTGTTTCTCTCTCTCTCTCT+AGG - chr7_2:54058138-54058157 Msa1062920:three_prime_UTR 45.0%
!!! TCTCTCTCTCTCTAGGGTTT+TGG - chr7_2:54058145-54058164 Msa1062920:three_prime_UTR 45.0%
! AGGGGAATTTGAAGTTTGCG+TGG - chr7_2:54058355-54058374 Msa1062920:three_prime_UTR 45.0%
! AAGTTTGCGTGGTTTGAGGT+AGG - chr7_2:54058366-54058385 Msa1062920:three_prime_UTR 45.0%
!! CATAGGGTTTTGATGGGTAC+CGG - chr7_2:54058667-54058686 Msa1062920:intron 45.0%
ATTGGATGATGAGTGCATGC+TGG - chr7_2:54058770-54058789 Msa1062920:CDS 45.0%
GATACCGTCTTATGTAGGTG+TGG - chr7_2:54058842-54058861 Msa1062920:intron 45.0%
TAATGCGCCAAAAAAGGACC+AGG - chr7_2:54058992-54059011 Msa1062920:intron 45.0%
!!! TCTTCGACCTGGTCCTTTTT+TGG + chr7_2:54059002-54059021 None:intergenic 45.0%
CCACTTTCTATGTGCTCTTC+TGG + chr7_2:54059035-54059054 None:intergenic 45.0%
! CCAGAAGAGCACATAGAAAG+TGG - chr7_2:54059032-54059051 Msa1062920:intron 45.0%
AATCCTTATCCCACTAAGCC+GGG + chr7_2:54059178-54059197 None:intergenic 45.0%
TTGTGGATTCCGGAAAACAG+TGG - chr7_2:54059301-54059320 Msa1062920:intron 45.0%
! TGACATACAATTTGGGACGG+AGG - chr7_2:54059732-54059751 Msa1062920:CDS 45.0%
! GACATACAATTTGGGACGGA+GGG - chr7_2:54059733-54059752 Msa1062920:CDS 45.0%
TGATGGAAGTAAGCTTCCTC+CGG - chr7_2:54060037-54060056 Msa1062920:intron 45.0%
AAATTTCCTGGCCAGACGAA+GGG + chr7_2:54060596-54060615 None:intergenic 45.0%
AAAATTTCCTGGCCAGACGA+AGG + chr7_2:54060597-54060616 None:intergenic 45.0%
! TCGTCTGGCCAGGAAATTTT+CGG - chr7_2:54060597-54060616 Msa1062920:intron 45.0%
TCACCCAATGGAACCTTAGA+AGG + chr7_2:54060630-54060649 None:intergenic 45.0%
TCAGTGAAGGATTCACCCAA+TGG + chr7_2:54060642-54060661 None:intergenic 45.0%
GTACGGTGGTGATCAATGAA+AGG - chr7_2:54060774-54060793 Msa1062920:intron 45.0%
! TCTATTTTGCACCCTTGGCT+TGG - chr7_2:54060891-54060910 Msa1062920:intron 45.0%
CAGTCAAATGAACCAAGCCA+AGG + chr7_2:54060906-54060925 None:intergenic 45.0%
!! AATTATCAGGTACTGAGCCG+CGG + chr7_2:54061175-54061194 None:intergenic 45.0%
CAGAAACATGCTCCAGTCAT+AGG - chr7_2:54061342-54061361 Msa1062920:CDS 45.0%
ACACATGGTCACAATCGTAC+AGG - chr7_2:54061674-54061693 Msa1062920:CDS 45.0%
TCTGTTACTCAGGTCAGCAT+TGG - chr7_2:54061737-54061756 Msa1062920:intron 45.0%
!! CCCGAACTTGTTGATCTCAA+TGG - chr7_2:54061972-54061991 Msa1062920:intron 45.0%
!! GATGATGATGATGGAGTACC+AGG - chr7_2:54062020-54062039 Msa1062920:intron 45.0%
! ACACATGGTTTGGGTTTAGG+GGG - chr7_2:54062183-54062202 Msa1062920:intron 45.0%
! AACTTTCTTTGGGAGAGGTG+GGG - chr7_2:54062267-54062286 Msa1062920:intron 45.0%
AGGAAAATTGCCACCCTACA+AGG + chr7_2:54062353-54062372 None:intergenic 45.0%
! GTAGGGTGGCAATTTTCCTT+TGG - chr7_2:54062354-54062373 Msa1062920:intron 45.0%
CCAGGTTCAAGAATGTGCTA+AGG + chr7_2:54062648-54062667 None:intergenic 45.0%
CCTTAGCACATTCTTGAACC+TGG - chr7_2:54062645-54062664 Msa1062920:intron 45.0%
CTACATCTACCTATGACAGC+TGG - chr7_2:54062822-54062841 Msa1062920:intron 45.0%
TGTTAGTGTTAAGCTGTCGG+TGG + chr7_2:54062848-54062867 None:intergenic 45.0%
AGATACTCAAATTGGGGGCT+GGG - chr7_2:54063099-54063118 Msa1062920:intron 45.0%
! TTGTTTGTTAAGGGCCCGTT+TGG - chr7_2:54063240-54063259 Msa1062920:CDS 45.0%
GGATGTATTCTGCAGGTTGT+TGG - chr7_2:54063491-54063510 Msa1062920:intron 45.0%
TGGAAATTGCATGTGTCCTC+TGG + chr7_2:54064072-54064091 None:intergenic 45.0%
AGAGGACACATGCAATTTCC+AGG - chr7_2:54064071-54064090 Msa1062920:intron 45.0%
GAGGACACATGCAATTTCCA+GGG - chr7_2:54064072-54064091 Msa1062920:intron 45.0%
CACACCCAGTTTCTTTAGAC+AGG - chr7_2:54064096-54064115 Msa1062920:intron 45.0%
GAGAAGATGGAATGCTAGCT+AGG + chr7_2:54064355-54064374 None:intergenic 45.0%
ACATCATTTGCAACCCTGCA+TGG + chr7_2:54064760-54064779 None:intergenic 45.0%
CCCCATCAAGTAATGTGAAG+TGG + chr7_2:54064906-54064925 None:intergenic 45.0%
TTAGTCCTTTAGTTGAGGGC+TGG - chr7_2:54065476-54065495 Msa1062920:intron 45.0%
GCATCAGATACGAATACACG+AGG - chr7_2:54065502-54065521 Msa1062920:intron 45.0%
! CAGAAGCGCAATACATAGAG+AGG + chr7_2:54065617-54065636 None:intergenic 45.0%
CTCTCTATGTATTGCGCTTC+TGG - chr7_2:54065615-54065634 Msa1062920:intron 45.0%
TGGTACCGTTCATGATTCCT+GGG + chr7_2:54065890-54065909 None:intergenic 45.0%
ATGGTACCGTTCATGATTCC+TGG + chr7_2:54065891-54065910 None:intergenic 45.0%
CGCAGATGGTCTCATATTTC+AGG - chr7_2:54066120-54066139 Msa1062920:intron 45.0%
!! ACCTGTGAGTAACTTGCTTC+TGG - chr7_2:54066203-54066222 Msa1062920:intron 45.0%
ACCAGAAGCAAGTTACTCAC+AGG + chr7_2:54066207-54066226 None:intergenic 45.0%
AGGTGATAGAGAACCAATGG+GGG + chr7_2:54066295-54066314 None:intergenic 45.0%
GAGGTGATAGAGAACCAATG+GGG + chr7_2:54066296-54066315 None:intergenic 45.0%
CGATGTCTCTTTAACTGGAC+TGG + chr7_2:54066398-54066417 None:intergenic 45.0%
!! ACCTAGACTAGCTTAGAGTC+TGG - chr7_2:54066449-54066468 Msa1062920:intron 45.0%
! TCCAGACTCTAAGCTAGTCT+AGG + chr7_2:54066453-54066472 None:intergenic 45.0%
AAGAGACCTTCATGAGTACG+AGG + chr7_2:54066605-54066624 None:intergenic 45.0%
AGTATTTAGGCAGGGGAAAG+AGG + chr7_2:54067153-54067172 None:intergenic 45.0%
! TTCTGGTGGGTGCTAGAAAT+TGG + chr7_2:54067358-54067377 None:intergenic 45.0%
! TCCATACCCAACTTTCTGGT+GGG + chr7_2:54067371-54067390 None:intergenic 45.0%
TTCCATACCCAACTTTCTGG+TGG + chr7_2:54067372-54067391 None:intergenic 45.0%
! TCAGACCCCATGCTTTATTC+TGG - chr7_2:54067545-54067564 Msa1062920:intron 45.0%
GAAAGATCATCGAGTGTGCT+TGG - chr7_2:54067567-54067586 Msa1062920:intron 45.0%
GGGATGGTGATAGAAACGAA+TGG - chr7_2:54067588-54067607 Msa1062920:intron 45.0%
TTCAGTCAACAGGACATCCT+CGG + chr7_2:54067788-54067807 None:intergenic 45.0%
CTTATCCTGTCGGCATACAT+GGG + chr7_2:54067832-54067851 None:intergenic 45.0%
TCTTATCCTGTCGGCATACA+TGG + chr7_2:54067833-54067852 None:intergenic 45.0%
GCAAAGGACATCATGTAGCT+AGG - chr7_2:54067860-54067879 Msa1062920:intron 45.0%
CTAGGCGAAAGTAATCAGTG+AGG - chr7_2:54067878-54067897 Msa1062920:intron 45.0%
GTCTGTAAAGCTTTCACTGG+TGG - chr7_2:54067909-54067928 Msa1062920:intron 45.0%
AATCGACACCGCTCAAATTC+GGG - chr7_2:54068043-54068062 Msa1062920:intron 45.0%
CAACATAGCTTCCACTAAGG+AGG + chr7_2:54068303-54068322 None:intergenic 45.0%
CTCCTTAGTGGAAGCTATGT+TGG - chr7_2:54068301-54068320 Msa1062920:five_prime_UTR 45.0%
TCCCAACATAGCTTCCACTA+AGG + chr7_2:54068306-54068325 None:intergenic 45.0%
!! TATATTTATAACAAAAATTT+AGG + chr7_2:54067036-54067055 None:intergenic 5.0%
CAGAACGGTTCTCAGAGTGA+TGG + chr7_2:54058181-54058200 None:intergenic 50.0%
!! TGTGGCGGGTGAATGTTACT+TGG - chr7_2:54058880-54058899 Msa1062920:intron 50.0%
CTTGAATGCCTCTCCTTTGC+CGG - chr7_2:54058929-54058948 Msa1062920:intron 50.0%
TCTTCATCTTCCTCCGGCAA+AGG + chr7_2:54058945-54058964 None:intergenic 50.0%
!! TGAAGATCCTTTTGAGGGCC+AGG - chr7_2:54058959-54058978 Msa1062920:intron 50.0%
GCGCATTATACTCTTCGACC+TGG + chr7_2:54058980-54058999 None:intergenic 50.0%
GCGCAATATACTCTTCGACC+TGG + chr7_2:54059013-54059032 None:intergenic 50.0%
TTTGATCCATGTAGCCGACC+CGG - chr7_2:54059157-54059176 Msa1062920:intron 50.0%
GGATTCCGGAAAACAGTGGT+TGG - chr7_2:54059305-54059324 Msa1062920:intron 50.0%
!! AAAGAGAGCGTCCAGATGAC+AGG - chr7_2:54059949-54059968 Msa1062920:intron 50.0%
AGGTGGCTGTGATACTTGCA+CGG + chr7_2:54059976-54059995 None:intergenic 50.0%
GATGGAAGTAAGCTTCCTCC+GGG - chr7_2:54060038-54060057 Msa1062920:intron 50.0%
AAGTAAGCTTCCTCCGGGTA+AGG - chr7_2:54060043-54060062 Msa1062920:intron 50.0%
CCAGGGAAGAAATCCTTACC+CGG + chr7_2:54060059-54060078 None:intergenic 50.0%
GTCACCAATTACCACCAGCA+AGG + chr7_2:54060093-54060112 None:intergenic 50.0%
!!! TGTTCTTTTGGGGCTCTGAG+TGG - chr7_2:54060350-54060369 Msa1062920:intron 50.0%
!! TGTTACGTTGGCTTGCAGCT+TGG - chr7_2:54060940-54060959 Msa1062920:intron 50.0%
! GTTACTCAGGTCAGCATTGG+AGG - chr7_2:54061740-54061759 Msa1062920:intron 50.0%
! TTTTCTGATGCACGTCCTCC+AGG - chr7_2:54061849-54061868 Msa1062920:intron 50.0%
GCAGGACAGACTATCGTTTC+AGG + chr7_2:54061930-54061949 None:intergenic 50.0%
GATAGTCTGTCCTGCTACTC+CGG - chr7_2:54061935-54061954 Msa1062920:intron 50.0%
! ACTTTCTTTGGGAGAGGTGG+GGG - chr7_2:54062268-54062287 Msa1062920:intron 50.0%
GTAACAATGGTGACCCCCTT+CGG - chr7_2:54062402-54062421 Msa1062920:intron 50.0%
TACAATCCGCTCAAGCCGAA+GGG + chr7_2:54062420-54062439 None:intergenic 50.0%
ATACAATCCGCTCAAGCCGA+AGG + chr7_2:54062421-54062440 None:intergenic 50.0%
ATGGGACATGGTCGTGTTTG+CGG - chr7_2:54062567-54062586 Msa1062920:intron 50.0%
CAGATACTCAAATTGGGGGC+TGG - chr7_2:54063098-54063117 Msa1062920:intron 50.0%
GATACTCAAATTGGGGGCTG+GGG - chr7_2:54063100-54063119 Msa1062920:intron 50.0%
GTTACAGAGGCTCCCAGTAA+AGG + chr7_2:54063679-54063698 None:intergenic 50.0%
TTTCTGAATGTGCAGGCCAG+AGG - chr7_2:54064053-54064072 Msa1062920:intron 50.0%
AAAGAAACTGGGTGTGACCC+TGG + chr7_2:54064092-54064111 None:intergenic 50.0%
CAACTGCGTGTCTGTGATAG+AGG - chr7_2:54064999-54065018 Msa1062920:intron 50.0%
CTGGTACAAACTTGGAGCAG+CGG - chr7_2:54065819-54065838 Msa1062920:intron 50.0%
ATCTTCCACCGCTCACAGAA+AGG + chr7_2:54065845-54065864 None:intergenic 50.0%
CTTCTGGTCTAATGCCAAGC+TGG - chr7_2:54066219-54066238 Msa1062920:intron 50.0%
GAAGCAGTATGCAGACCTTG+AGG + chr7_2:54066315-54066334 None:intergenic 50.0%
TGTATCAGTGGGCCTGTACT+TGG - chr7_2:54066985-54067004 Msa1062920:intron 50.0%
GTATCAGTGGGCCTGTACTT+GGG - chr7_2:54066986-54067005 Msa1062920:intron 50.0%
TTTAGGCAGGGGAAAGAGGA+GGG + chr7_2:54067149-54067168 None:intergenic 50.0%
ATTTAGGCAGGGGAAAGAGG+AGG + chr7_2:54067150-54067169 None:intergenic 50.0%
TCTAGCACCCACCAGAAAGT+TGG - chr7_2:54067361-54067380 Msa1062920:CDS 50.0%
CTAGCACCCACCAGAAAGTT+GGG - chr7_2:54067362-54067381 Msa1062920:CDS 50.0%
ACCCACCAGAAAGTTGGGTA+TGG - chr7_2:54067367-54067386 Msa1062920:CDS 50.0%
ATCATCGAGTGTGCTTGGGA+TGG - chr7_2:54067572-54067591 Msa1062920:intron 50.0%
GTTTCAGGCCCGAATTTGAG+CGG + chr7_2:54068054-54068073 None:intergenic 50.0%
GGGCCTGAAACCATTTCTTG+TGG - chr7_2:54068063-54068082 Msa1062920:intron 50.0%
!! ATGGGTACCGGTACCCTGTA+AGG - chr7_2:54058679-54058698 Msa1062920:CDS 55.0%
! GGCGGGTGAATGTTACTTGG+TGG - chr7_2:54058883-54058902 Msa1062920:intron 55.0%
ATCTTCCTCCGGCAAAGGAG+AGG + chr7_2:54058940-54058959 None:intergenic 55.0%
TCTTCGACCTGGCCCTCAAA+AGG + chr7_2:54058969-54058988 None:intergenic 55.0%
GTGGAGCTGATATAGCTCGC+CGG - chr7_2:54059051-54059070 Msa1062920:intron 55.0%
TGGAGCTGATATAGCTCGCC+GGG - chr7_2:54059052-54059071 Msa1062920:intron 55.0%
CTTATCCCACTAAGCCGGGT+CGG + chr7_2:54059174-54059193 None:intergenic 55.0%
TAGCGGCGCTATAGCACTGT+TGG + chr7_2:54059339-54059358 None:intergenic 55.0%
GGTGGCTGTGATACTTGCAC+GGG + chr7_2:54059975-54059994 None:intergenic 55.0%
GTGCAAGTATCACAGCCACC+TGG - chr7_2:54059975-54059994 Msa1062920:intron 55.0%
GGGAAGAAATCCTTACCCGG+AGG + chr7_2:54060056-54060075 None:intergenic 55.0%
CCGGGTAAGGATTTCTTCCC+TGG - chr7_2:54060056-54060075 Msa1062920:intron 55.0%
GCTGCCTTGCTGGTGGTAAT+TGG - chr7_2:54060086-54060105 Msa1062920:intron 55.0%
TGGTTGGATTGCCCTTCGTC+TGG - chr7_2:54060582-54060601 Msa1062920:intron 55.0%
TAGATCCAATGCAAGGGCCG+CGG - chr7_2:54061155-54061174 Msa1062920:intron 55.0%
TGCTACTCCGGAGTGGAAGA+GGG - chr7_2:54061947-54061966 Msa1062920:intron 55.0%
CATACTTGCAACGGAGGACC+TGG + chr7_2:54062041-54062060 None:intergenic 55.0%
! TTTGGGTTTAGGGGGCCAAC+TGG - chr7_2:54062191-54062210 Msa1062920:intron 55.0%
ACAATCCGCTCAAGCCGAAG+GGG + chr7_2:54062419-54062438 None:intergenic 55.0%
TTGGCGGGGATGTATTCTGC+AGG - chr7_2:54063484-54063503 Msa1062920:intron 55.0%
GCTAGCCAGCCCTCAACTAA+AGG + chr7_2:54065484-54065503 None:intergenic 55.0%
TGGGAGAGGGAAATCCAGTG+TGG - chr7_2:54065560-54065579 Msa1062920:intron 55.0%
TCTGCGTCGTGTGAGAGCTT+CGG + chr7_2:54066106-54066125 None:intergenic 55.0%
AAGCTCTCACACGACGCAGA+TGG - chr7_2:54066106-54066125 Msa1062920:intron 55.0%
GGAAAGAGGAGGGTGGAAGA+GGG + chr7_2:54067139-54067158 None:intergenic 55.0%
TGTCGGCATACATGGGAAGG+CGG + chr7_2:54067825-54067844 None:intergenic 55.0%
TCCTGTCGGCATACATGGGA+AGG + chr7_2:54067828-54067847 None:intergenic 55.0%
GAATGCCTCTCCTTTGCCGG+AGG - chr7_2:54058932-54058951 Msa1062920:intron 60.0%
ACTAAGCCGGGTCGGCTACA+TGG + chr7_2:54059166-54059185 None:intergenic 60.0%
ATGTAGCCGACCCGGCTTAG+TGG - chr7_2:54059165-54059184 Msa1062920:intron 60.0%
TGTAGCCGACCCGGCTTAGT+GGG - chr7_2:54059166-54059185 Msa1062920:intron 60.0%
CGACCCGGCTTAGTGGGATA+AGG - chr7_2:54059172-54059191 Msa1062920:intron 60.0%
ACTTGCACGGGCCTGTCATC+TGG + chr7_2:54059963-54059982 None:intergenic 60.0%
GCAAGGCAGCGAGTTGTCCA+GGG + chr7_2:54060076-54060095 None:intergenic 60.0%
AGCAAGGCAGCGAGTTGTCC+AGG + chr7_2:54060077-54060096 None:intergenic 60.0%
TGGACAACTCGCTGCCTTGC+TGG - chr7_2:54060076-54060095 Msa1062920:intron 60.0%
ACAACTCGCTGCCTTGCTGG+TGG - chr7_2:54060079-54060098 Msa1062920:intron 60.0%
!! CGTTGGCTTGCAGCTTGGTC+TGG - chr7_2:54060945-54060964 Msa1062920:intron 60.0%
TCTGTCCTGCTACTCCGGAG+TGG - chr7_2:54061940-54061959 Msa1062920:intron 60.0%
CTCTTCCACTCCGGAGTAGC+AGG + chr7_2:54061948-54061967 None:intergenic 60.0%
CTGCTACTCCGGAGTGGAAG+AGG - chr7_2:54061946-54061965 Msa1062920:intron 60.0%
CAATCCGCTCAAGCCGAAGG+GGG + chr7_2:54062418-54062437 None:intergenic 60.0%
TGTCGGTGGCCAGCTGTCAT+AGG + chr7_2:54062834-54062853 None:intergenic 60.0%
AGCAGCGGCCTTTCTGTGAG+CGG - chr7_2:54065834-54065853 Msa1062920:intron 60.0%
GGGAAAGAGGAGGGTGGAAG+AGG + chr7_2:54067140-54067159 None:intergenic 60.0%
GCCTTCCCATGTATGCCGAC+AGG - chr7_2:54067824-54067843 Msa1062920:intron 60.0%
GGATTGCCCTTCGTCTGGCC+AGG - chr7_2:54060587-54060606 Msa1062920:intron 65.0%
TCGGGAGCCCTCTTCCACTC+CGG + chr7_2:54061957-54061976 None:intergenic 65.0%
! GTGACCCCCTTCGGCTTGAG+CGG - chr7_2:54062411-54062430 Msa1062920:intron 65.0%
AGCGGCCTTTCTGTGAGCGG+TGG - chr7_2:54065837-54065856 Msa1062920:intron 65.0%
AGGCAGGGGAAAGAGGAGGG+TGG + chr7_2:54067146-54067165 None:intergenic 65.0%
CTGAGCCGCGGCCCTTGCAT+TGG + chr7_2:54061163-54061182 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 54058006 54068343 54058006 ID=Msa1062920;Name=Msa1062920
chr7_2 mRNA 54058006 54068343 54058006 ID=Msa1062920-mRNA-1;Parent=Msa1062920;Name=Msa1062920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=346|1|1|1|0.88|0.84|19|452|690
chr7_2 exon 54058006 54058592 54058006 ID=Msa1062920-mRNA-1:exon:9931;Parent=Msa1062920-mRNA-1
chr7_2 exon 54058679 54058809 54058679 ID=Msa1062920-mRNA-1:exon:9930;Parent=Msa1062920-mRNA-1
chr7_2 exon 54059478 54059559 54059478 ID=Msa1062920-mRNA-1:exon:9929;Parent=Msa1062920-mRNA-1
chr7_2 exon 54059679 54059768 54059679 ID=Msa1062920-mRNA-1:exon:9928;Parent=Msa1062920-mRNA-1
chr7_2 exon 54060208 54060306 54060208 ID=Msa1062920-mRNA-1:exon:9927;Parent=Msa1062920-mRNA-1
chr7_2 exon 54060397 54060510 54060397 ID=Msa1062920-mRNA-1:exon:9926;Parent=Msa1062920-mRNA-1
chr7_2 exon 54061329 54061466 54061329 ID=Msa1062920-mRNA-1:exon:9925;Parent=Msa1062920-mRNA-1
chr7_2 exon 54061572 54061734 54061572 ID=Msa1062920-mRNA-1:exon:9924;Parent=Msa1062920-mRNA-1
chr7_2 exon 54062232 54062281 54062232 ID=Msa1062920-mRNA-1:exon:9923;Parent=Msa1062920-mRNA-1
chr7_2 exon 54063228 54063347 54063228 ID=Msa1062920-mRNA-1:exon:9922;Parent=Msa1062920-mRNA-1
chr7_2 exon 54064294 54064512 54064294 ID=Msa1062920-mRNA-1:exon:9921;Parent=Msa1062920-mRNA-1
chr7_2 exon 54064601 54064732 54064601 ID=Msa1062920-mRNA-1:exon:9920;Parent=Msa1062920-mRNA-1
chr7_2 exon 54065129 54065191 54065129 ID=Msa1062920-mRNA-1:exon:9919;Parent=Msa1062920-mRNA-1
chr7_2 exon 54065308 54065391 54065308 ID=Msa1062920-mRNA-1:exon:9918;Parent=Msa1062920-mRNA-1
chr7_2 exon 54065618 54065769 54065618 ID=Msa1062920-mRNA-1:exon:9917;Parent=Msa1062920-mRNA-1
chr7_2 exon 54066290 54066428 54066290 ID=Msa1062920-mRNA-1:exon:9916;Parent=Msa1062920-mRNA-1
chr7_2 exon 54067276 54067521 54067276 ID=Msa1062920-mRNA-1:exon:9915;Parent=Msa1062920-mRNA-1
chr7_2 exon 54067966 54068009 54067966 ID=Msa1062920-mRNA-1:exon:9914;Parent=Msa1062920-mRNA-1
chr7_2 exon 54068126 54068343 54068126 ID=Msa1062920-mRNA-1:exon:9913;Parent=Msa1062920-mRNA-1
chr7_2 five_prime_UTR 54068126 54068343 54068126 ID=Msa1062920-mRNA-1:five_prime_utr;Parent=Msa1062920-mRNA-1
chr7_2 five_prime_UTR 54067966 54068009 54067966 ID=Msa1062920-mRNA-1:five_prime_utr;Parent=Msa1062920-mRNA-1
chr7_2 five_prime_UTR 54067438 54067521 54067438 ID=Msa1062920-mRNA-1:five_prime_utr;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54067276 54067437 54067276 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54066290 54066428 54066290 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54065618 54065769 54065618 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54065308 54065391 54065308 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54065129 54065191 54065129 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54064601 54064732 54064601 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54064294 54064512 54064294 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54063228 54063347 54063228 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54062232 54062281 54062232 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54061572 54061734 54061572 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54061329 54061466 54061329 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54060397 54060510 54060397 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54060208 54060306 54060208 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54059679 54059768 54059679 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54059478 54059559 54059478 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54058679 54058809 54058679 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 CDS 54058458 54058592 54058458 ID=Msa1062920-mRNA-1:cds;Parent=Msa1062920-mRNA-1
chr7_2 three_prime_UTR 54058006 54058457 54058006 ID=Msa1062920-mRNA-1:three_prime_utr;Parent=Msa1062920-mRNA-1
Gene Sequence

>Msa1062920

ATGACAATTTCTATGGACTTGAATGCCTCTCCTTTGCCGGAGGAAGATGAAGATCCTTTTGAGGGCCAGGTCGAAGAGTATAATGCGCCAAAAAAGGACCAGGTCGAAGAGTATATTGCGCCAGAAGAGCACATAGAAAGTGGAGCTGATATAGCTCGCCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAAAGAGAGCGTCCAGATGACAGGCCCGTGCAAGTATCACAGCCACCTGGATATGATAATTTTTTCCATAATAAGATCCTTAAATCATATGATGGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTCGTCTGGCCAGGAAATTTTCGGCATGATACCTTCTAAGGTTCCATTGGGTGAATCCTTCACTGACGATATTTTACCTGGTAAAAGATACTCATTTAGACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATCTGACAAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGCGGCTCAGTACCTGATAATTCATCTGTCAATCACTTTGTGTACGAGGTTAGACAATTTTTATCGTGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCACAATCGTACAGGATATATGATTGTCCATTATCTAATGCGCACAATGTCAATGTCTGTTACTCAGGCGATAAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTCTATCATGAAAAAAAGCCTGAAACGATAGTCTGTCCTGCTACTCCGGAGTGGAAGAGGGCTCCCGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAGATAATGATGACGATGATGATGATGGAGTACCAGGTCCTCCGTTGCAAGAGAACCATGAGATTGACACAATAATGACAAACGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGGCAGTTCTGCTTTCAGATACTCAAATTGGGGGCTGGGGCCAGAGGACACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAGACAGGGAAAATTTACAGCTGCTACGCCAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTTCTTGATTGATAGAAACTTCAATTTTAGAAGGATTCAAATGAGGTTTCCATGCAGGGTTGCAAATGATGGCTTGGCAGAGAAGACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACAGTGCCAAATTCAAAAAAGCAGGCAAGGAGATACCTAATATATGATCTGATGGCGGTCAACTGCGTGTCTGTGATAGAGCGGCCTTTCTGTGAGCGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCATGAACGGTACCATCGCAAACATCCTTACTATATATATGACATGGAGCCTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTGACAAAACTTTTGAATGAATTCATTCCGAAGCTCTCACACGACGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGTACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGCTCTGAATTCAGTTGATTTTCTCTTTGAGATTGTTGCTGATCGTCAGCTACTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTTTATTGTTGCATTCAAAGAAGGTTCAGACCCCATGCTTTATTCTGGAAAGATCATCGAGTGTGCTTGGGATGGTGATAGAAACGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCAACTCCCAATGACTTCAATACTTACAAGAAGGTGATGCGAAGCATAAAAGACAATATCACCGAGGATGTCCTGTTGACTGAAATAAACGAGATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGGACATCATGTAGCTAGGCGAAAGTAA

Protein sequence

>Msa1062920

MTISMDLNASPLPEEDEDPFEGQVEEYNAPKKDQVEEYIAPEEHIESGADIARREREERKKRLKRERPDDRPVQVSQPPGYDNFFHNKILKSYDGSKLPPGWLDCPSSGQEIFGMIPSKVPLGESFTDDILPGKRYSFRQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVYEVRQFLSCQKHSKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPETIVCPATPEWKRAPELVDLNGEAAPDNDDDDDDGVPGPPLQENHEIDTIMTNDDVLGDEIPNDQQDAFRQFCFQILKLGAGARGHMQFPGSHPVSLDRENLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRNFNFRRIQMRFPCRVANDGLAEKTHHFTLLDGEMIIDTVPNSKKQARRYLIYDLMAVNCVSVIERPFCERWKMLEKEVIEPRNHERYHRKHPYYIYDMEPFRVRRKDFWLLSAVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYAALNSVDFLFEIVADRQLLFLYERGKKKLMEGFIVAFKEGSDPMLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDFNTYKKVMRSIKDNITEDVLLTEINEIIRLPMYADRIRIDSKGHHVARRK*