AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692950 MtrunA17_Chr4g0043241 97.836 647 13 1 1 647 1 646 0.0 1295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692950 AT2G03667.1 59.908 651 214 9 1 645 1 610 0.0 719
Msa0692950 AT2G03667.2 57.323 635 222 10 1 629 1 592 0.0 664

Find 149 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATTTGGAAGAGAAATTT+AGG 0.134029 4_4:+61745113 Msa0692950:CDS
TTCGAATTCAAACGGATTTC+TGG 0.151787 4_4:+61740503 Msa0692950:CDS
TTAACATTGGAATAGCTTTA+TGG 0.154371 4_4:+61743996 Msa0692950:CDS
GAATCAAATCGGAAGAATTT+TGG 0.199066 4_4:+61746321 Msa0692950:CDS
TATGATACTTGCGGCATTAC+TGG 0.227735 4_4:+61742020 Msa0692950:CDS
TTCTCCGCAGAGCTTCTTTC+AGG 0.244260 4_4:-61738731 None:intergenic
GATGTTCTTTCTACAATTAA+AGG 0.246010 4_4:+61739439 Msa0692950:CDS
AGGATTCTCCTTGTTGGTTC+TGG 0.256567 4_4:+61744103 Msa0692950:CDS
AACTCGACATGCAAAGAATT+TGG 0.259227 4_4:+61745099 Msa0692950:CDS
ATTTGTAGGAAATCAAATTT+TGG 0.264241 4_4:+61746387 Msa0692950:CDS
CGTTTCGTCGTGTTCTATAA+AGG 0.266928 4_4:-61738817 None:intergenic
CTACTTACTGTAAGCTTTGA+TGG 0.268070 4_4:+61742779 Msa0692950:CDS
TTAGGCTAGATTTCCATTCT+TGG 0.295521 4_4:+61745262 Msa0692950:intron
GAATTTGGAAGAGAAATTTA+GGG 0.314158 4_4:+61745114 Msa0692950:CDS
GAATTGAACATCTTAGTTAC+TGG 0.314500 4_4:+61740439 Msa0692950:CDS
ATACCAGTGGCCTGCTGATC+TGG 0.314738 4_4:-61739705 None:intergenic
TCTTGGATGAGGATGTTATA+AGG 0.320991 4_4:+61745279 Msa0692950:CDS
CGGTGCAACTTTGCAGCTTA+GGG 0.326746 4_4:+61738887 Msa0692950:CDS
TTCTTCACACCCAAGCTATC+AGG 0.334928 4_4:-61738759 None:intergenic
ATAGCTTTATGGCTCGCTTC+TGG 0.341166 4_4:+61744007 Msa0692950:CDS
TCGGTGCAACTTTGCAGCTT+AGG 0.341471 4_4:+61738886 Msa0692950:CDS
ATTGCATAGGCTGTGATATC+TGG 0.346833 4_4:+61741940 Msa0692950:intron
TCCGCTTGTTCAGCCTTTAG+TGG 0.349517 4_4:+61738917 Msa0692950:CDS
CGAAACATTCTGGTGTATAA+TGG 0.352754 4_4:+61738948 Msa0692950:CDS
GGATGCTTCTCGAAACATTC+TGG 0.367158 4_4:+61738938 Msa0692950:CDS
GATGAACAGTGTGCTGGTTA+TGG 0.367158 4_4:+61744130 Msa0692950:CDS
GTTCTATAAAGGATGAGATT+TGG 0.372374 4_4:-61738806 None:intergenic
GCCTGCTGATCTGGAGCAAC+TGG 0.375811 4_4:-61739696 None:intergenic
CGCTTCTGGTGGTGATGGAT+GGG 0.378774 4_4:+61744021 Msa0692950:CDS
CTTGGATGAGGATGTTATAA+GGG 0.386802 4_4:+61745280 Msa0692950:CDS
TGATGCTGACTTGTCAGATT+TGG 0.390352 4_4:+61743825 Msa0692950:CDS
TTGGGGAAGTTGAGTGGAAT+GGG 0.390754 4_4:-61738457 None:intergenic
CTGAAGGTTGCACAATTGCT+TGG 0.402771 4_4:+61746150 Msa0692950:intron
GCAGAAAATGAAGCTCATAA+TGG 0.407580 4_4:+61740417 Msa0692950:intron
TCGCTTCTGGTGGTGATGGA+TGG 0.408976 4_4:+61744020 Msa0692950:CDS
TCCTGTGGTTCTTATTTGAC+TGG 0.408994 4_4:+61739382 Msa0692950:CDS
TCTTCCCAAGCGGGCAATCC+AGG 0.409100 4_4:+61746191 Msa0692950:CDS
GCACACCTGGATTGCCCGCT+TGG 0.411228 4_4:-61746196 None:intergenic
AATGCAAGGATTCTCCTTGT+TGG 0.411893 4_4:+61744097 Msa0692950:CDS
ATGAACAGTGTGCTGGTTAT+GGG 0.415694 4_4:+61744131 Msa0692950:CDS
GTCATTGTATACTATCTATC+AGG 0.417008 4_4:+61740935 Msa0692950:CDS
CTTGGGAATTGTTGCTCCTG+TGG 0.427510 4_4:+61739367 Msa0692950:CDS
CAGGCAGTGTAAGGATTTGT+AGG 0.429146 4_4:+61746373 Msa0692950:CDS
AGGATAGTTCAAGGACCCTT+TGG 0.431242 4_4:+61739586 Msa0692950:intron
AAGTAATCGAGCAGCAAATC+AGG 0.431308 4_4:+61746344 Msa0692950:CDS
TTCTATTGCAGGATAGTTCA+AGG 0.432555 4_4:+61739577 Msa0692950:intron
ATAAAGCTATTCCAATGTTA+AGG 0.439997 4_4:-61743994 None:intergenic
GGAATTGCATTGACCGTCTC+AGG 0.441436 4_4:+61738410 Msa0692950:CDS
GGCGGAGCCTTCTTGTTCAC+TGG 0.445360 4_4:+61739631 Msa0692950:CDS
AGTTCAAGGACCCTTTGGTT+TGG 0.446623 4_4:+61739591 Msa0692950:CDS
GACCATGGGCTATCATCTAT+TGG 0.452967 4_4:+61739461 Msa0692950:CDS
AGTTTCTTATGCAGACTCTT+GGG 0.458584 4_4:+61739350 Msa0692950:CDS
AGGCGTCTGCAGGCAGTGTA+AGG 0.458985 4_4:+61746364 Msa0692950:CDS
CACACCTGGATTGCCCGCTT+GGG 0.462355 4_4:-61746195 None:intergenic
TTTGGGGAAGTTGAGTGGAA+TGG 0.465230 4_4:-61738458 None:intergenic
AGTTGAGTGGAATGGGAGAG+AGG 0.468545 4_4:-61738450 None:intergenic
AGCACTCACAACTGGGATCC+AGG 0.469254 4_4:-61742050 None:intergenic
GAGAAGAGGTCCTGATAGCT+TGG 0.474458 4_4:+61738749 Msa0692950:CDS
TGGTTTGGCCGAGATGCATT+TGG 0.474834 4_4:+61739606 Msa0692950:CDS
TGGCTCGCTTCTGGTGGTGA+TGG 0.475719 4_4:+61744016 Msa0692950:CDS
ATAGATGTATTGCTGATAAC+GGG 0.477324 4_4:+61745144 Msa0692950:CDS
ATATGCCTTAATCAGTTGGC+TGG 0.477902 4_4:+61745058 Msa0692950:intron
GAGTTTCTTATGCAGACTCT+TGG 0.484407 4_4:+61739349 Msa0692950:CDS
GATAGAAAATCTGCCAAGGC+AGG 0.484885 4_4:+61742815 Msa0692950:CDS
TTTACTCAACATTCCATTGT+GGG 0.487822 4_4:+61745304 Msa0692950:CDS
TAGTTCTTTCAACCCTGCCT+TGG 0.492382 4_4:-61742828 None:intergenic
TTCTACAATTAAAGGACCAT+GGG 0.492445 4_4:+61739447 Msa0692950:CDS
GCAGCAAATCAGGCGTCTGC+AGG 0.493660 4_4:+61746354 Msa0692950:CDS
TAGATTTCCATTCTTGGATG+AGG 0.494104 4_4:+61745268 Msa0692950:CDS
TGGATTGCATACCGTCTTGA+CGG 0.501054 4_4:-61742863 None:intergenic
GCCAGTTGCTCCAGATCAGC+AGG 0.501944 4_4:+61739695 Msa0692950:CDS
ATATACAAACTCAACATTGA+AGG 0.502927 4_4:+61740548 Msa0692950:CDS
CCAGAGAAAAGAATTGCAAC+AGG 0.504982 4_4:-61741985 None:intergenic
GATAGATGTATTGCTGATAA+CGG 0.505667 4_4:+61745143 Msa0692950:CDS
GGCGATTTGGGGAAGTTGAG+TGG 0.513848 4_4:-61738463 None:intergenic
TTTCTACAATTAAAGGACCA+TGG 0.517454 4_4:+61739446 Msa0692950:CDS
ATGCATCTCGGCCAAACCAA+AGG 0.517811 4_4:-61739602 None:intergenic
GAATTGCGAGGGAATCAAAT+CGG 0.518766 4_4:+61746310 Msa0692950:CDS
TATGCCTTAATCAGTTGGCT+GGG 0.520727 4_4:+61745059 Msa0692950:intron
GAGACAGTTCCATGCGAAGC+AGG 0.526342 4_4:+61740678 Msa0692950:CDS
GATTAGTACCATGTAGGTGT+TGG 0.527041 4_4:-61743887 None:intergenic
CTTTATATATATATTATGCC+TGG 0.533641 4_4:+61746512 Msa0692950:three_prime_UTR
AATTGAACATCTTAGTTACT+GGG 0.534296 4_4:+61740440 Msa0692950:CDS
AGAAGAGGTCCTGATAGCTT+GGG 0.535911 4_4:+61738750 Msa0692950:CDS
GCCACTAGGTTGATCAAGGT+TGG 0.537230 4_4:-61745333 None:intergenic
GCCGAGATGCATTTGGTAGG+CGG 0.538103 4_4:+61739613 Msa0692950:CDS
ATAACATCCTCATCCAAGAA+TGG 0.538611 4_4:-61745275 None:intergenic
TTTCGAGAAGCATCCACTAA+AGG 0.538876 4_4:-61738930 None:intergenic
GTGGATGCTTCGAATTCAAA+CGG 0.541109 4_4:+61740495 Msa0692950:CDS
TGCATCTCGGCCAAACCAAA+GGG 0.542020 4_4:-61739601 None:intergenic
ATGGGCTATCATCTATTGGC+AGG 0.544781 4_4:+61739465 Msa0692950:CDS
GGCATTACTGGATCAATGCC+TGG 0.546449 4_4:+61742032 Msa0692950:CDS
CGATGCCACTAGGTTGATCA+AGG 0.546600 4_4:-61745337 None:intergenic
AACAAGGAGAATCCTTGCAT+TGG 0.546989 4_4:-61744095 None:intergenic
AACGGAGAACTTCATTTCAT+CGG 0.547006 4_4:+61738867 Msa0692950:CDS
AACTGTGTTAAATGCGGGAA+AGG 0.547646 4_4:+61739406 Msa0692950:CDS
GGTGCTGATGAACAGTGTGC+TGG 0.549892 4_4:+61744124 Msa0692950:CDS
GCTCCAGATCAGCAGGCCAC+TGG 0.553421 4_4:+61739702 Msa0692950:CDS
ACTTAGGGCAGGATGTCTGC+AGG 0.555484 4_4:-61740617 None:intergenic
TAGTAATAACCTGCTTCGCA+TGG 0.561332 4_4:-61740687 None:intergenic
AAAGAAGCTCTGCGGAGAAG+AGG 0.562727 4_4:+61738735 Msa0692950:CDS
TTGGCCGAGATGCATTTGGT+AGG 0.570304 4_4:+61739610 Msa0692950:CDS
CTTGATCAACCTAGTGGCAT+CGG 0.570501 4_4:+61745338 Msa0692950:CDS
AATTCAAACGGATTTCTGGT+TGG 0.573232 4_4:+61740507 Msa0692950:CDS
TCCACTAAAGGCTGAACAAG+CGG 0.574215 4_4:-61738918 None:intergenic
AGCAGCGGTTCTTCCCAAGC+GGG 0.574387 4_4:+61746182 Msa0692950:CDS
AGTACCATGTAGGTGTTGGA+AGG 0.577841 4_4:-61743883 None:intergenic
AGCAACATATGAGCTCGCAT+TGG 0.577951 4_4:-61740879 None:intergenic
ACCAGTCAAATAAGAACCAC+AGG 0.577955 4_4:-61739383 None:intergenic
AAAGTTGAATCATCTTCTGT+AGG 0.580809 4_4:-61739654 None:intergenic
AAATCCTTCCAACACCTACA+TGG 0.583957 4_4:+61743879 Msa0692950:CDS
TCCGCCTACCAAATGCATCT+CGG 0.585873 4_4:-61739614 None:intergenic
GCTTTATGGCTCGCTTCTGG+TGG 0.587213 4_4:+61744010 Msa0692950:CDS
GGTGCAACTTTGCAGCTTAG+GGG 0.596413 4_4:+61738888 Msa0692950:CDS
GTTTGGTTCTAGAATTGCGA+GGG 0.601355 4_4:+61746299 Msa0692950:intron
AGGTTGGCAACCTCCCACAA+TGG 0.602775 4_4:-61745317 None:intergenic
CTGGTAACTGTGTTAAATGC+GGG 0.603339 4_4:+61739401 Msa0692950:CDS
AGGATTGATTAGTACCATGT+AGG 0.603931 4_4:-61743893 None:intergenic
ACTCAACATTCCATTGTGGG+AGG 0.607103 4_4:+61745307 Msa0692950:CDS
ATGCCTTAATCAGTTGGCTG+GGG 0.607245 4_4:+61745060 Msa0692950:intron
AAGAGTCTGCATAAGAAACT+CGG 0.611073 4_4:-61739347 None:intergenic
CAGTTGGCTGGGGCTAGATG+AGG 0.613342 4_4:+61745070 Msa0692950:intron
TTAAATACAAGTCCAATGCA+AGG 0.613359 4_4:+61744083 Msa0692950:CDS
GAAGCAGAAACGAAGATGTG+TGG 0.614701 4_4:+61738389 None:intergenic
ATAGAAAATCTGCCAAGGCA+GGG 0.618548 4_4:+61742816 Msa0692950:CDS
CTGTAGGCCAGTGAACAAGA+AGG 0.621892 4_4:-61739638 None:intergenic
TCCTGATAGAAAATCTGCCA+AGG 0.622329 4_4:+61742811 Msa0692950:CDS
CATTGAAGGAACTTATCAAG+TGG 0.622380 4_4:+61740562 Msa0692950:CDS
AAAGGCAGTATAGTAGCACC+AGG 0.624881 4_4:-61746530 None:intergenic
CATCAGCACCAGAACCAACA+AGG 0.625991 4_4:-61744111 None:intergenic
ATTGAAGGAACTTATCAAGT+GGG 0.628054 4_4:+61740563 Msa0692950:CDS
GCTGGATTCTATGATACTTG+CGG 0.628488 4_4:+61742011 Msa0692950:CDS
GTTAATTCGAATGCCTGAGA+CGG 0.629293 4_4:-61738423 None:intergenic
AAAGAGTTGCACCGTCAAGA+CGG 0.637047 4_4:+61742852 Msa0692950:CDS
TGCCAATAGATGATAGCCCA+TGG 0.642233 4_4:-61739463 None:intergenic
AAAGTGCAGGTGGAGACTCG+TGG 0.644656 4_4:+61743798 Msa0692950:intron
ATGTATTGCTGATAACGGGA+AGG 0.646619 4_4:+61745148 Msa0692950:CDS
ATAATGATGACACTCATGCA+CGG 0.647092 4_4:+61744059 Msa0692950:CDS
TATTGCTGATAACGGGAAGG+AGG 0.649083 4_4:+61745151 Msa0692950:CDS
GCTTGGTTTATATGAAGCAG+CGG 0.661880 4_4:+61746167 Msa0692950:CDS
AAGCAGCGGTTCTTCCCAAG+CGG 0.665430 4_4:+61746181 Msa0692950:CDS
TCTGCAAATGAAGACAGTAA+CGG 0.682909 4_4:+61738849 Msa0692950:CDS
ACTGGTAACTGTGTTAAATG+CGG 0.692384 4_4:+61739400 Msa0692950:CDS
TACTGGGAAGAGCTACCATG+TGG 0.698665 4_4:+61740456 Msa0692950:CDS
GCCAACCTTGATCAACCTAG+TGG 0.703456 4_4:+61745332 Msa0692950:CDS
TGCATACTATATATTCCACA+TGG 0.727847 4_4:-61740471 None:intergenic
ATGACCTGAAAGAAGCTCTG+CGG 0.729969 4_4:+61738727 Msa0692950:CDS
AGTTTGGTTCTAGAATTGCG+AGG 0.738420 4_4:+61746298 Msa0692950:intron
TGGAATATATAGTATGCACG+TGG 0.745413 4_4:+61740476 Msa0692950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTCTAATAATTGAATT+TGG + chr4_4:61741765-61741784 Msa0692950:intron 10.0%
!! AAATAAAATTCAATATCATA+TGG - chr4_4:61743044-61743063 None:intergenic 10.0%
!! TTAAGTAAAACAAAAAGTTA+TGG - chr4_4:61738656-61738675 None:intergenic 15.0%
!!! TAATTTTTTTTATGTTCTTC+AGG + chr4_4:61739280-61739299 Msa0692950:intron 15.0%
!!! ATTTCTATTATATGTTTTGT+AGG + chr4_4:61741788-61741807 Msa0692950:intron 15.0%
!!! TTTCTATTATATGTTTTGTA+GGG + chr4_4:61741789-61741808 Msa0692950:intron 15.0%
!! AAAAAGATATAAAGTAAACA+TGG - chr4_4:61742886-61742905 None:intergenic 15.0%
!!! ACTATTTTCAATTTGAAATT+AGG - chr4_4:61743225-61743244 None:intergenic 15.0%
!!! CACATATTCTAAAATTTAAT+TGG - chr4_4:61744387-61744406 None:intergenic 15.0%
!! AAATGATGGTAAAAATATTT+AGG - chr4_4:61744610-61744629 None:intergenic 15.0%
!! TAATTGAGAAAATAAAATGA+TGG - chr4_4:61744624-61744643 None:intergenic 15.0%
!!! TTTTTATATATGAATTGGAT+TGG + chr4_4:61746484-61746503 Msa0692950:three_prime_UTR 15.0%
!!! ATTAACTTACATTTTCAGAT+TGG - chr4_4:61738487-61738506 None:intergenic 20.0%
!! ATATCAACATTTCTACAATA+GGG + chr4_4:61739069-61739088 Msa0692950:intron 20.0%
!!! CTTTTTTACTAAATGACAAT+AGG - chr4_4:61739816-61739835 None:intergenic 20.0%
!! ATTTATCTCAAGAATTTCAT+TGG + chr4_4:61739989-61740008 Msa0692950:intron 20.0%
!! TTGAAGATGATTACAAAATA+TGG - chr4_4:61740057-61740076 None:intergenic 20.0%
!! AGAGATTGTCAAAAATTTAA+GGG - chr4_4:61740824-61740843 None:intergenic 20.0%
!!! TATGTTGCTAAATGTTTTAA+AGG + chr4_4:61740893-61740912 Msa0692950:CDS 20.0%
!! TCTTATTAACATCATACAAA+CGG - chr4_4:61741046-61741065 None:intergenic 20.0%
!!! TAATAAGATGTTTTCAACTT+TGG + chr4_4:61741058-61741077 Msa0692950:intron 20.0%
!!! AATAAGATGTTTTCAACTTT+GGG + chr4_4:61741059-61741078 Msa0692950:intron 20.0%
!! TCTTGAAATTTCAAAAAACA+AGG + chr4_4:61741552-61741571 Msa0692950:intron 20.0%
!! TTTAGTTACAATTTGCATAT+GGG - chr4_4:61741710-61741729 None:intergenic 20.0%
!! ATTTAGTTACAATTTGCATA+TGG - chr4_4:61741711-61741730 None:intergenic 20.0%
!! ATATACCATTTGTTCTTTAA+TGG + chr4_4:61741816-61741835 Msa0692950:intron 20.0%
!! TATACCATTTGTTCTTTAAT+GGG + chr4_4:61741817-61741836 Msa0692950:intron 20.0%
!! ATATAAAAGAAATCTACTGA+AGG - chr4_4:61741898-61741917 None:intergenic 20.0%
!! AATTCAAACTGCAATTAATT+AGG + chr4_4:61742202-61742221 Msa0692950:intron 20.0%
!! TTCTTCTAAATAAAGATTCA+AGG - chr4_4:61742494-61742513 None:intergenic 20.0%
!! ATTCATATGATTTAATCCAA+TGG - chr4_4:61742615-61742634 None:intergenic 20.0%
!! ATTGGATTAAATCATATGAA+TGG + chr4_4:61742614-61742633 Msa0692950:intron 20.0%
!! AAAGTCCAATTAAATGTTTA+AGG - chr4_4:61742939-61742958 None:intergenic 20.0%
!!! CATATATTTTTCATTGTTAG+AGG + chr4_4:61743105-61743124 Msa0692950:intron 20.0%
!!! TCAAGACATTTTAAAACAAT+AGG - chr4_4:61743339-61743358 None:intergenic 20.0%
!! TTTAATGGAATCCTAATTTA+GGG + chr4_4:61744685-61744704 Msa0692950:intron 20.0%
!! TATGAACAACAAAGTTAATA+GGG + chr4_4:61744825-61744844 Msa0692950:intron 20.0%
!!! ACTTAAAGTTTTTGATTGAT+AGG + chr4_4:61744878-61744897 Msa0692950:intron 20.0%
!! ACTATGAGATTAACAAATTA+GGG - chr4_4:61745211-61745230 None:intergenic 20.0%
!! AACTATGAGATTAACAAATT+AGG - chr4_4:61745212-61745231 None:intergenic 20.0%
!!! TTTGATTTGTTTTTCTCTTT+AGG + chr4_4:61745244-61745263 Msa0692950:intron 20.0%
!!! TGATAAAAAGATTTTAAGAG+AGG + chr4_4:61745361-61745380 Msa0692950:CDS 20.0%
!! AGATGTTAAGTTATTCAAAA+AGG - chr4_4:61745500-61745519 None:intergenic 20.0%
!!! AATTTTGAAGTGTAAAGTTT+TGG - chr4_4:61746225-61746244 None:intergenic 20.0%
!!! ATTTGTAGGAAATCAAATTT+TGG + chr4_4:61746387-61746406 Msa0692950:CDS 20.0%
!! CTTTATATATATATTATGCC+TGG + chr4_4:61746512-61746531 Msa0692950:three_prime_UTR 20.0%
!! TCATTTTCTCAACTTATTGT+CGG + chr4_4:61738567-61738586 Msa0692950:intron 25.0%
!! TTTTTACTGTGTGATTGATT+TGG + chr4_4:61738683-61738702 Msa0692950:intron 25.0%
! GATATCAACATTTCTACAAT+AGG + chr4_4:61739068-61739087 Msa0692950:intron 25.0%
! TGAAACATAGTTATAAACTG+TGG + chr4_4:61739142-61739161 Msa0692950:intron 25.0%
! GATGTTCTTTCTACAATTAA+AGG + chr4_4:61739439-61739458 Msa0692950:CDS 25.0%
!!! TACTTTCTTTTTTCTATTGC+AGG + chr4_4:61739566-61739585 Msa0692950:intron 25.0%
! TGGTATGTAATACATGAAAT+TGG + chr4_4:61739722-61739741 Msa0692950:intron 25.0%
! TGTAATACATGAAATTGGAA+TGG + chr4_4:61739727-61739746 Msa0692950:intron 25.0%
! ATAAATAGCGTCAATTAAAG+AGG - chr4_4:61739975-61739994 None:intergenic 25.0%
! CTAATTAATGCAAAAGTTTG+AGG - chr4_4:61740015-61740034 None:intergenic 25.0%
! CTGTATATAAATAAGAGGAA+GGG - chr4_4:61740274-61740293 None:intergenic 25.0%
! AATTGAACATCTTAGTTACT+GGG + chr4_4:61740440-61740459 Msa0692950:CDS 25.0%
! ATATACAAACTCAACATTGA+AGG + chr4_4:61740548-61740567 Msa0692950:CDS 25.0%
! GAACTGTGAATTAATACTAA+AGG - chr4_4:61740793-61740812 None:intergenic 25.0%
! CAGAGATTGTCAAAAATTTA+AGG - chr4_4:61740825-61740844 None:intergenic 25.0%
! CTTATTAACATCATACAAAC+GGG - chr4_4:61741045-61741064 None:intergenic 25.0%
!! ATAAGATGTTTTCAACTTTG+GGG + chr4_4:61741060-61741079 Msa0692950:intron 25.0%
! ATCTCTAGTAACAAAACTTT+AGG - chr4_4:61741595-61741614 None:intergenic 25.0%
! TAATCCCATTAAAGAACAAA+TGG - chr4_4:61741824-61741843 None:intergenic 25.0%
! AATGTCGTTAAAGAATCTAA+AGG - chr4_4:61741847-61741866 None:intergenic 25.0%
! TTATATTTGTCATGACTCTT+TGG + chr4_4:61741912-61741931 Msa0692950:intron 25.0%
! AGAATAATCAAGATAGAAGA+AGG - chr4_4:61742094-61742113 None:intergenic 25.0%
! TATGATAGTTGCAGATTTAT+AGG + chr4_4:61742251-61742270 Msa0692950:intron 25.0%
! ATGATAGTTGCAGATTTATA+GGG + chr4_4:61742252-61742271 Msa0692950:intron 25.0%
! TTTAGAAGAATGAGATAAGA+AGG + chr4_4:61742504-61742523 Msa0692950:intron 25.0%
! TTCATCTGTCAATTAAAAAG+AGG - chr4_4:61742753-61742772 None:intergenic 25.0%
! CCAATTAAATGTTTAAGGAA+AGG - chr4_4:61742934-61742953 None:intergenic 25.0%
! CCTTTCCTTAAACATTTAAT+TGG + chr4_4:61742931-61742950 Msa0692950:intron 25.0%
! TTCTTGTATGATTAATGACA+TGG + chr4_4:61743154-61743173 Msa0692950:intron 25.0%
!!! TTGCTGTTTGTATAATTTCA+TGG + chr4_4:61743420-61743439 Msa0692950:intron 25.0%
! AATTTCATGGAAGAATATAC+TGG + chr4_4:61743433-61743452 Msa0692950:intron 25.0%
! ATAAAGCTATTCCAATGTTA+AGG - chr4_4:61743997-61744016 None:intergenic 25.0%
!! TTAACATTGGAATAGCTTTA+TGG + chr4_4:61743996-61744015 Msa0692950:CDS 25.0%
! GTTTAATGGAATCCTAATTT+AGG + chr4_4:61744684-61744703 Msa0692950:intron 25.0%
!! TAGAAACTAAATTGATAGCA+AGG + chr4_4:61744768-61744787 Msa0692950:intron 25.0%
!! AGAAACTAAATTGATAGCAA+GGG + chr4_4:61744769-61744788 Msa0692950:intron 25.0%
! CTATGAACAACAAAGTTAAT+AGG + chr4_4:61744824-61744843 Msa0692950:intron 25.0%
! TCAATCAAAAACTTTAAGTC+AGG - chr4_4:61744877-61744896 None:intergenic 25.0%
!!! AAAGTTTTTGATTGATAGGT+TGG + chr4_4:61744882-61744901 Msa0692950:intron 25.0%
!! ACATGTGCATTTTCTTTTAA+AGG + chr4_4:61745023-61745042 Msa0692950:intron 25.0%
!!! ATTTTCTTTTAAAGGACTGA+CGG + chr4_4:61745031-61745050 Msa0692950:intron 25.0%
! TATAATATGCCTTAATCAGT+TGG + chr4_4:61745054-61745073 Msa0692950:intron 25.0%
! AGAATTTGGAAGAGAAATTT+AGG + chr4_4:61745113-61745132 Msa0692950:CDS 25.0%
! GAATTTGGAAGAGAAATTTA+GGG + chr4_4:61745114-61745133 Msa0692950:CDS 25.0%
!! AAACTAGTGATCCAAATTTT+TGG + chr4_4:61745535-61745554 Msa0692950:intron 25.0%
! ACGAGTTATGAATGAATATA+AGG + chr4_4:61745577-61745596 Msa0692950:intron 25.0%
! TCAGTTTATTTAATTGTCTG+TGG + chr4_4:61745694-61745713 Msa0692950:intron 25.0%
!!! TTCAAGTTATTTTCAAGAAC+TGG - chr4_4:61745724-61745743 None:intergenic 25.0%
!!! AAACAAATATGCGTTGATTT+TGG + chr4_4:61745851-61745870 Msa0692950:intron 25.0%
! CATCTATAAAATATCGCAAA+TGG - chr4_4:61746036-61746055 None:intergenic 25.0%
!! ATGGTCAATATATTTTCTGA+AGG + chr4_4:61746134-61746153 Msa0692950:intron 25.0%
!!! TTGATTTGTCTTTGATGTAT+TGG + chr4_4:61746272-61746291 Msa0692950:intron 25.0%
!!! GTTGATTCTTTATTTTCTCT+GGG + chr4_4:61746409-61746428 Msa0692950:exon 25.0%
GTTCTATAAAGGATGAGATT+TGG - chr4_4:61738809-61738828 None:intergenic 30.0%
! AACTGCAATTCTAGTTGTAT+CGG + chr4_4:61739170-61739189 Msa0692950:intron 30.0%
CTTGATACTGCAATAAAATG+TGG - chr4_4:61739196-61739215 None:intergenic 30.0%
! CACATTTTATTGCAGTATCA+AGG + chr4_4:61739194-61739213 Msa0692950:intron 30.0%
TTTCTACAATTAAAGGACCA+TGG + chr4_4:61739446-61739465 Msa0692950:CDS 30.0%
TTCTACAATTAAAGGACCAT+GGG + chr4_4:61739447-61739466 Msa0692950:CDS 30.0%
GTAATTATTCGCTTTCTTTG+TGG + chr4_4:61739525-61739544 Msa0692950:intron 30.0%
AAAGTTGAATCATCTTCTGT+AGG - chr4_4:61739657-61739676 None:intergenic 30.0%
TTTCATGTATTACATACCAG+TGG - chr4_4:61739721-61739740 None:intergenic 30.0%
ATAGTTTATGCAGTACATTC+TGG - chr4_4:61739865-61739884 None:intergenic 30.0%
AATATGGAGCGAAAACTTAT+CGG - chr4_4:61740041-61740060 None:intergenic 30.0%
TTGGTATCTTATCTTGCTTA+TGG + chr4_4:61740138-61740157 Msa0692950:intron 30.0%
CTTATCTTGCTTATGGAATA+AGG + chr4_4:61740145-61740164 Msa0692950:intron 30.0%
!! AACACCAATTCATAGTTTTG+AGG + chr4_4:61740185-61740204 Msa0692950:intron 30.0%
!!! ACACCAATTCATAGTTTTGA+GGG + chr4_4:61740186-61740205 Msa0692950:intron 30.0%
GCTGTATATAAATAAGAGGA+AGG - chr4_4:61740275-61740294 None:intergenic 30.0%
CCATGCTGTATATAAATAAG+AGG - chr4_4:61740279-61740298 None:intergenic 30.0%
! CCTCTTATTTATATACAGCA+TGG + chr4_4:61740276-61740295 Msa0692950:intron 30.0%
AATTGTTGAGTTATGACAAC+AGG - chr4_4:61740374-61740393 None:intergenic 30.0%
GAATTGAACATCTTAGTTAC+TGG + chr4_4:61740439-61740458 Msa0692950:CDS 30.0%
TGCATACTATATATTCCACA+TGG - chr4_4:61740474-61740493 None:intergenic 30.0%
ATTGAAGGAACTTATCAAGT+GGG + chr4_4:61740563-61740582 Msa0692950:CDS 30.0%
GGGAATGACAATTATGTATT+TGG - chr4_4:61740757-61740776 None:intergenic 30.0%
GTCATTGTATACTATCTATC+AGG + chr4_4:61740935-61740954 Msa0692950:CDS 30.0%
GTAAGCTACTTAGTTGAAAT+TGG + chr4_4:61740957-61740976 Msa0692950:intron 30.0%
!!! TGTATGTATACCTCCTTTTT+TGG + chr4_4:61740991-61741010 Msa0692950:intron 30.0%
TCAAAAAACAAGGTGAATAC+CGG + chr4_4:61741562-61741581 Msa0692950:intron 30.0%
!! CAAAACTTTAGGAAGTTTTC+CGG - chr4_4:61741584-61741603 None:intergenic 30.0%
! TCAACCAAATATTTCAAGTC+TGG + chr4_4:61741635-61741654 Msa0692950:intron 30.0%
TGTACCAGACTTGAAATATT+TGG - chr4_4:61741642-61741661 None:intergenic 30.0%
ATATGTCAAACACAAAAGGT+TGG - chr4_4:61741741-61741760 None:intergenic 30.0%
CCAAATATGTCAAACACAAA+AGG - chr4_4:61741745-61741764 None:intergenic 30.0%
! CCTTTTGTGTTTGACATATT+TGG + chr4_4:61741742-61741761 Msa0692950:intron 30.0%
AAATCTACTGAAGGAAAACA+AGG - chr4_4:61741889-61741908 None:intergenic 30.0%
TTTGCAAACATTAAACCTGT+TGG - chr4_4:61742152-61742171 None:intergenic 30.0%
! TGCATCTGTAACTGTTATTT+AGG + chr4_4:61742177-61742196 Msa0692950:intron 30.0%
TGTCAAACTCAAAGAAGTTT+AGG - chr4_4:61742355-61742374 None:intergenic 30.0%
! GCTTAAGGTTCTAATATAGT+TGG - chr4_4:61742378-61742397 None:intergenic 30.0%
ATATTAGAACCTTAAGCTGT+TGG + chr4_4:61742381-61742400 Msa0692950:intron 30.0%
TATTAGAACCTTAAGCTGTT+GGG + chr4_4:61742382-61742401 Msa0692950:intron 30.0%
TATGTAACAAGTTCCTTGTT+TGG + chr4_4:61742642-61742661 Msa0692950:intron 30.0%
AATTCAGCAGGAAAAGTTTA+TGG - chr4_4:61743077-61743096 None:intergenic 30.0%
AAGTGAATAAATGTGTGAGT+AGG + chr4_4:61743286-61743305 Msa0692950:intron 30.0%
TGGCATCAACATGAAATTTA+TGG + chr4_4:61743453-61743472 Msa0692950:intron 30.0%
ATAGAGATCTTGACTAAGAT+CGG + chr4_4:61743528-61743547 Msa0692950:intron 30.0%
TCTTGACAACATTGTTCTAT+TGG + chr4_4:61743711-61743730 Msa0692950:intron 30.0%
! GTCGATATCTTTTATAGCAT+CGG + chr4_4:61743745-61743764 Msa0692950:intron 30.0%
GTGTTTGAAAACTTAGCTAT+AGG - chr4_4:61743931-61743950 None:intergenic 30.0%
CCAATCATCAAATAATGTCA+AGG - chr4_4:61743953-61743972 None:intergenic 30.0%
! CCTTGACATTATTTGATGAT+TGG + chr4_4:61743950-61743969 Msa0692950:intron 30.0%
TTAAATACAAGTCCAATGCA+AGG + chr4_4:61744083-61744102 Msa0692950:CDS 30.0%
GCATACAACTTGAAAATTAC+AGG - chr4_4:61744319-61744338 None:intergenic 30.0%
CTAAAGCAAAGAAGAAAGAA+AGG - chr4_4:61744358-61744377 None:intergenic 30.0%
! ACATATTCTTTTCTGTGGAA+AGG - chr4_4:61744432-61744451 None:intergenic 30.0%
! TTGCAACATATTCTTTTCTG+TGG - chr4_4:61744437-61744456 None:intergenic 30.0%
!! TGGCTTTAATAAATTACCTC+AGG + chr4_4:61744494-61744513 Msa0692950:intron 30.0%
TGAATAACATATTAGACCTG+AGG - chr4_4:61744513-61744532 None:intergenic 30.0%
GATTTGAGGAATGAGTTTAA+TGG + chr4_4:61744670-61744689 Msa0692950:intron 30.0%
GTCAAATTAGTCCCTAAATT+AGG - chr4_4:61744699-61744718 None:intergenic 30.0%
!!! TTGATAGCAAGGGTATTTTA+AGG + chr4_4:61744779-61744798 Msa0692950:intron 30.0%
! TTGTTGTTCATAGATACAAG+TGG - chr4_4:61744817-61744836 None:intergenic 30.0%
AAGACTCATTGTATCTTATG+TGG + chr4_4:61744905-61744924 Msa0692950:intron 30.0%
CAAAATTCTTTAAGTCACCT+TGG + chr4_4:61744964-61744983 Msa0692950:intron 30.0%
GTACTATTAAGTTAACACCA+AGG - chr4_4:61744984-61745003 None:intergenic 30.0%
GATAGATGTATTGCTGATAA+CGG + chr4_4:61745143-61745162 Msa0692950:CDS 30.0%
ATAGATGTATTGCTGATAAC+GGG + chr4_4:61745144-61745163 Msa0692950:CDS 30.0%
! TTTTACTCAACATTCCATTG+TGG + chr4_4:61745303-61745322 Msa0692950:CDS 30.0%
TTTACTCAACATTCCATTGT+GGG + chr4_4:61745304-61745323 Msa0692950:CDS 30.0%
TGAGCATGTTACCAAAAATT+TGG - chr4_4:61745549-61745568 None:intergenic 30.0%
! TCAGAAAGAGCTCTATTTTA+TGG + chr4_4:61745655-61745674 Msa0692950:intron 30.0%
ACATGAACTTCTACTTCAAA+GGG - chr4_4:61745770-61745789 None:intergenic 30.0%
AACATGAACTTCTACTTCAA+AGG - chr4_4:61745771-61745790 None:intergenic 30.0%
!!! TTCCTTTATTTTTGACGAAC+CGG - chr4_4:61745832-61745851 None:intergenic 30.0%
!!! GACAGAAAAGGGTTTTATTT+TGG - chr4_4:61746072-61746091 None:intergenic 30.0%
TGAAGATCCAACATAGAAAA+TGG + chr4_4:61746092-61746111 Msa0692950:intron 30.0%
! TGACCATGAGATTTAAGTTT+GGG - chr4_4:61746121-61746140 None:intergenic 30.0%
! TTGACCATGAGATTTAAGTT+TGG - chr4_4:61746122-61746141 None:intergenic 30.0%
! TTTGATGTATTGGTGTAGTT+TGG + chr4_4:61746282-61746301 Msa0692950:intron 30.0%
! GAATCAAATCGGAAGAATTT+TGG + chr4_4:61746321-61746340 Msa0692950:CDS 30.0%
!!! GGTTGATTCTTTATTTTCTC+TGG + chr4_4:61746408-61746427 Msa0692950:exon 30.0%
! ATTTTCAGATTGGCGATTTG+GGG - chr4_4:61738477-61738496 None:intergenic 35.0%
! CATTTTCAGATTGGCGATTT+GGG - chr4_4:61738478-61738497 None:intergenic 35.0%
! ACATTTTCAGATTGGCGATT+TGG - chr4_4:61738479-61738498 None:intergenic 35.0%
TCTGCAAATGAAGACAGTAA+CGG + chr4_4:61738849-61738868 Msa0692950:CDS 35.0%
AACGGAGAACTTCATTTCAT+CGG + chr4_4:61738867-61738886 Msa0692950:CDS 35.0%
CGAAACATTCTGGTGTATAA+TGG + chr4_4:61738948-61738967 Msa0692950:CDS 35.0%
! ACAACGAAGTCTAAAATCAG+AGG - chr4_4:61738989-61739008 None:intergenic 35.0%
TACAACTAGAATTGCAGTTG+CGG - chr4_4:61739169-61739188 None:intergenic 35.0%
ACATCTTACTGCAAACATCA+TGG - chr4_4:61739251-61739270 None:intergenic 35.0%
! TGTTCTTCAGGTGAGATTTT+CGG + chr4_4:61739292-61739311 Msa0692950:intron 35.0%
AAGAGTCTGCATAAGAAACT+CGG - chr4_4:61739350-61739369 None:intergenic 35.0%
AGTTTCTTATGCAGACTCTT+GGG + chr4_4:61739350-61739369 Msa0692950:CDS 35.0%
ACTGGTAACTGTGTTAAATG+CGG + chr4_4:61739400-61739419 Msa0692950:CDS 35.0%
TTTCTTTGTGGAGTCATAAG+TGG + chr4_4:61739537-61739556 Msa0692950:intron 35.0%
TTCTATTGCAGGATAGTTCA+AGG + chr4_4:61739577-61739596 Msa0692950:intron 35.0%
AATTGGAATGGAACAACTAC+TGG + chr4_4:61739739-61739758 Msa0692950:intron 35.0%
AATGACAATAGGCTCTATTC+AGG - chr4_4:61739805-61739824 None:intergenic 35.0%
GTACTCGTTATCATTGACAT+TGG + chr4_4:61739885-61739904 Msa0692950:intron 35.0%
! GAAAGTGTATGACTGTTTGT+AGG + chr4_4:61739939-61739958 Msa0692950:intron 35.0%
GGCTATGATCTTAAAGCTAT+GGG - chr4_4:61740089-61740108 None:intergenic 35.0%
! GAATTGGTGTTCTGTAATCA+GGG - chr4_4:61740176-61740195 None:intergenic 35.0%
! TGAATTGGTGTTCTGTAATC+AGG - chr4_4:61740177-61740196 None:intergenic 35.0%
!!! CACCAATTCATAGTTTTGAG+GGG + chr4_4:61740187-61740206 Msa0692950:intron 35.0%
!! AGTGATTTGAGAAAGTGTTG+AGG - chr4_4:61740234-61740253 None:intergenic 35.0%
AAATAAGAGGAAGGGATAGA+GGG - chr4_4:61740266-61740285 None:intergenic 35.0%
TAAATAAGAGGAAGGGATAG+AGG - chr4_4:61740267-61740286 None:intergenic 35.0%
ACTGAGATAGTAAGAGAAGT+AGG - chr4_4:61740302-61740321 None:intergenic 35.0%
GCAGAAAATGAAGCTCATAA+TGG + chr4_4:61740417-61740436 Msa0692950:intron 35.0%
TGGAATATATAGTATGCACG+TGG + chr4_4:61740476-61740495 Msa0692950:CDS 35.0%
! TTCGAATTCAAACGGATTTC+TGG + chr4_4:61740503-61740522 Msa0692950:CDS 35.0%
!! AATTCAAACGGATTTCTGGT+TGG + chr4_4:61740507-61740526 Msa0692950:CDS 35.0%
CATTGAAGGAACTTATCAAG+TGG + chr4_4:61740562-61740581 Msa0692950:CDS 35.0%
ATTGTCATTCCCATACATTC+TGG + chr4_4:61740765-61740784 Msa0692950:intron 35.0%
!! CTAAAGGTACCAGAATGTAT+GGG - chr4_4:61740777-61740796 None:intergenic 35.0%
!! ACTAAAGGTACCAGAATGTA+TGG - chr4_4:61740778-61740797 None:intergenic 35.0%
AATCTCTGTCTTGATTAAGC+AGG + chr4_4:61740837-61740856 Msa0692950:intron 35.0%
TTGATGTTAGCCAAAAAAGG+AGG - chr4_4:61741004-61741023 None:intergenic 35.0%
CCTTTGATGTTAGCCAAAAA+AGG - chr4_4:61741007-61741026 None:intergenic 35.0%
!!! CCTTTTTTGGCTAACATCAA+AGG + chr4_4:61741004-61741023 Msa0692950:intron 35.0%
TGAAGAAGCTAAATTGACAC+TGG + chr4_4:61741178-61741197 Msa0692950:intron 35.0%
GAAGAAGCTAAATTGACACT+GGG + chr4_4:61741179-61741198 Msa0692950:intron 35.0%
AAGAAGCTAAATTGACACTG+GGG + chr4_4:61741180-61741199 Msa0692950:intron 35.0%
TTGTTGTCGAGTGACTATAA+AGG - chr4_4:61741270-61741289 None:intergenic 35.0%
ATGCAAGTGAATGATAGAGA+TGG + chr4_4:61741364-61741383 Msa0692950:intron 35.0%
ATGGCTAAAAGACAAGACAA+GGG + chr4_4:61741383-61741402 Msa0692950:intron 35.0%
CTCTTTGGATTTGATTGCAT+AGG + chr4_4:61741927-61741946 Msa0692950:intron 35.0%
! TTGCAATTCTTTTCTCTGGT+GGG + chr4_4:61741989-61742008 Msa0692950:CDS 35.0%
GAAGGTAACTTGAGCTTATA+GGG - chr4_4:61742076-61742095 None:intergenic 35.0%
AGAAGGTAACTTGAGCTTAT+AGG - chr4_4:61742077-61742096 None:intergenic 35.0%
GTATATGATAATTCTCCCAG+AGG + chr4_4:61742311-61742330 Msa0692950:intron 35.0%
! ATCCAATGGCTTAACCTTTT+GGG - chr4_4:61742601-61742620 None:intergenic 35.0%
! AATCCAATGGCTTAACCTTT+TGG - chr4_4:61742602-61742621 None:intergenic 35.0%
TTGAATCACCTAAAGTAGAC+TGG + chr4_4:61742667-61742686 Msa0692950:intron 35.0%
TAGAGATTCGACTCATCTAA+AGG - chr4_4:61742729-61742748 None:intergenic 35.0%
! CTACTTACTGTAAGCTTTGA+TGG + chr4_4:61742779-61742798 Msa0692950:CDS 35.0%
TATGCATCTTAGAATTCAGC+AGG - chr4_4:61743089-61743108 None:intergenic 35.0%
!! ATTGTTAGAGGCATTGAAAG+TGG + chr4_4:61743117-61743136 Msa0692950:intron 35.0%
TGAATAAATGTGTGAGTAGG+CGG + chr4_4:61743289-61743308 Msa0692950:intron 35.0%
TAGAGATCTTGACTAAGATC+GGG + chr4_4:61743529-61743548 Msa0692950:intron 35.0%
TACTACCCAAGTAATTACGA+AGG - chr4_4:61743620-61743639 None:intergenic 35.0%
ATCGATATCTTGACTTAGAC+TGG - chr4_4:61743692-61743711 None:intergenic 35.0%
AGGATTGATTAGTACCATGT+AGG - chr4_4:61743896-61743915 None:intergenic 35.0%
!! TGGTTTGCACATATCTTTTC+AGG + chr4_4:61743970-61743989 Msa0692950:intron 35.0%
!! TCTTTTCAGGACCTTAACAT+TGG + chr4_4:61743983-61744002 Msa0692950:intron 35.0%
ATAATGATGACACTCATGCA+CGG + chr4_4:61744059-61744078 Msa0692950:CDS 35.0%
!!! CATAGAACAAGTTTTAGACG+AGG + chr4_4:61744157-61744176 Msa0692950:CDS 35.0%
! TTTCCTTTTGTCCATTAGCT+TGG + chr4_4:61744291-61744310 Msa0692950:intron 35.0%
!! TTCCTTTTGTCCATTAGCTT+GGG + chr4_4:61744292-61744311 Msa0692950:intron 35.0%
TTTCTTCTTTGCTTTAGCTG+TGG + chr4_4:61744361-61744380 Msa0692950:intron 35.0%
ACCATACAGCTTACAATCTA+TGG + chr4_4:61744474-61744493 Msa0692950:intron 35.0%
AGTAATGATGTGTGTAGCTT+TGG - chr4_4:61744582-61744601 None:intergenic 35.0%
AAATGTCAGTCTTCCTTTGT+TGG + chr4_4:61744648-61744667 Msa0692950:intron 35.0%
TCATTCCTCAAATCCAACAA+AGG - chr4_4:61744664-61744683 None:intergenic 35.0%
! AGATACAAGTGGTGTCAATT+GGG - chr4_4:61744806-61744825 None:intergenic 35.0%
! TAGATACAAGTGGTGTCAAT+TGG - chr4_4:61744807-61744826 None:intergenic 35.0%
AACTCGACATGCAAAGAATT+TGG + chr4_4:61745099-61745118 Msa0692950:CDS 35.0%
TTAGGCTAGATTTCCATTCT+TGG + chr4_4:61745262-61745281 Msa0692950:intron 35.0%
TAGATTTCCATTCTTGGATG+AGG + chr4_4:61745268-61745287 Msa0692950:CDS 35.0%
ATAACATCCTCATCCAAGAA+TGG - chr4_4:61745278-61745297 None:intergenic 35.0%
TCTTGGATGAGGATGTTATA+AGG + chr4_4:61745279-61745298 Msa0692950:CDS 35.0%
CTTGGATGAGGATGTTATAA+GGG + chr4_4:61745280-61745299 Msa0692950:CDS 35.0%
! AGGTATTGTTATTGACTGAG+TGG + chr4_4:61745381-61745400 Msa0692950:intron 35.0%
CATCTTGTCTGACCATTTAT+TGG + chr4_4:61745449-61745468 Msa0692950:intron 35.0%
! GAAAGAGCTCTATTTTATGG+CGG + chr4_4:61745658-61745677 Msa0692950:intron 35.0%
! AAAGAGCTCTATTTTATGGC+GGG + chr4_4:61745659-61745678 Msa0692950:intron 35.0%
CATGAACTTCTACTTCAAAG+GGG - chr4_4:61745769-61745788 None:intergenic 35.0%
AGATCACTGTTTCACTCATT+AGG + chr4_4:61745912-61745931 Msa0692950:intron 35.0%
TTTCACTCATTAGGATGAAG+AGG + chr4_4:61745921-61745940 Msa0692950:intron 35.0%
AAAATATCGCAAATGGTCCA+TGG - chr4_4:61746029-61746048 None:intergenic 35.0%
TTGGATCTTCAGACAGAAAA+GGG - chr4_4:61746083-61746102 None:intergenic 35.0%
ACTCCCAAACTTAAATCTCA+TGG + chr4_4:61746115-61746134 Msa0692950:intron 35.0%
!! TTTATTTTCTCTGGGCATGT+GGG + chr4_4:61746417-61746436 Msa0692950:three_prime_UTR 35.0%
GTTAATTCGAATGCCTGAGA+CGG - chr4_4:61738426-61738445 None:intergenic 40.0%
!! CATTCAATCAGAAGTGTCTG+AGG - chr4_4:61738514-61738533 None:intergenic 40.0%
GTGTTGTCTCAGTGTTTCAT+AGG + chr4_4:61738607-61738626 Msa0692950:intron 40.0%
CGTTTCGTCGTGTTCTATAA+AGG - chr4_4:61738820-61738839 None:intergenic 40.0%
!! TTTCGAGAAGCATCCACTAA+AGG - chr4_4:61738933-61738952 None:intergenic 40.0%
GAGTTTCTTATGCAGACTCT+TGG + chr4_4:61739349-61739368 Msa0692950:CDS 40.0%
! TCCTGTGGTTCTTATTTGAC+TGG + chr4_4:61739382-61739401 Msa0692950:CDS 40.0%
ACCAGTCAAATAAGAACCAC+AGG - chr4_4:61739386-61739405 None:intergenic 40.0%
CTGGTAACTGTGTTAAATGC+GGG + chr4_4:61739401-61739420 Msa0692950:CDS 40.0%
AACTGTGTTAAATGCGGGAA+AGG + chr4_4:61739406-61739425 Msa0692950:CDS 40.0%
GAACACAGAAACTTACCACT+TGG - chr4_4:61739496-61739515 None:intergenic 40.0%
CTCGTTATCATTGACATTGG+TGG + chr4_4:61739888-61739907 Msa0692950:intron 40.0%
GGGCTATGATCTTAAAGCTA+TGG - chr4_4:61740090-61740109 None:intergenic 40.0%
GACCCCTCAAAACTATGAAT+TGG - chr4_4:61740192-61740211 None:intergenic 40.0%
GTGGATGCTTCGAATTCAAA+CGG + chr4_4:61740495-61740514 Msa0692950:CDS 40.0%
! ATCCTGCCCTAAGTTTTCTA+GGG + chr4_4:61740626-61740645 Msa0692950:CDS 40.0%
TAGTAATAACCTGCTTCGCA+TGG - chr4_4:61740690-61740709 None:intergenic 40.0%
CAACTTCAACTGTTGCATCA+TGG + chr4_4:61741287-61741306 Msa0692950:intron 40.0%
GATGGCTAAAAGACAAGACA+AGG + chr4_4:61741382-61741401 Msa0692950:intron 40.0%
TGGCTAAAAGACAAGACAAG+GGG + chr4_4:61741384-61741403 Msa0692950:intron 40.0%
TACTGAAGGAAAACAAGGTC+AGG - chr4_4:61741884-61741903 None:intergenic 40.0%
ATTGCATAGGCTGTGATATC+TGG + chr4_4:61741940-61741959 Msa0692950:intron 40.0%
CCAGAGAAAAGAATTGCAAC+AGG - chr4_4:61741988-61742007 None:intergenic 40.0%
! CCTGTTGCAATTCTTTTCTC+TGG + chr4_4:61741985-61742004 Msa0692950:CDS 40.0%
! GTTGCAATTCTTTTCTCTGG+TGG + chr4_4:61741988-61742007 Msa0692950:CDS 40.0%
GCTGGATTCTATGATACTTG+CGG + chr4_4:61742011-61742030 Msa0692950:CDS 40.0%
TATGATACTTGCGGCATTAC+TGG + chr4_4:61742020-61742039 Msa0692950:CDS 40.0%
!! GGAATGGTTGATTTTCGACA+TGG - chr4_4:61742576-61742595 None:intergenic 40.0%
ATCAACCATTCCATCCCAAA+AGG + chr4_4:61742584-61742603 Msa0692950:intron 40.0%
!!! CTTAACCTTTTGGGATGGAA+TGG - chr4_4:61742592-61742611 None:intergenic 40.0%
!! AATGGCTTAACCTTTTGGGA+TGG - chr4_4:61742597-61742616 None:intergenic 40.0%
ATCCCAAAAGGTTAAGCCAT+TGG + chr4_4:61742596-61742615 Msa0692950:intron 40.0%
AGGTGATTCAACACCAAACA+AGG - chr4_4:61742658-61742677 None:intergenic 40.0%
TCCTGATAGAAAATCTGCCA+AGG + chr4_4:61742811-61742830 Msa0692950:CDS 40.0%
ATAGAAAATCTGCCAAGGCA+GGG + chr4_4:61742816-61742835 Msa0692950:CDS 40.0%
GAATAAATGTGTGAGTAGGC+GGG + chr4_4:61743290-61743309 Msa0692950:intron 40.0%
!! GTTTGCAAAGCACTGAATGA+AGG - chr4_4:61743373-61743392 None:intergenic 40.0%
TAGCAAGACTGCAAAACGTA+AGG - chr4_4:61743584-61743603 None:intergenic 40.0%
CCAAGTAATTACGAAGGATC+GGG - chr4_4:61743614-61743633 None:intergenic 40.0%
CCCAAGTAATTACGAAGGAT+CGG - chr4_4:61743615-61743634 None:intergenic 40.0%
CCGATCCTTCGTAATTACTT+GGG + chr4_4:61743612-61743631 Msa0692950:intron 40.0%
! AAAGCATCTGTTGAAAGTGC+AGG + chr4_4:61743785-61743804 Msa0692950:intron 40.0%
!! TGATGCTGACTTGTCAGATT+TGG + chr4_4:61743825-61743844 Msa0692950:CDS 40.0%
AAATCCTTCCAACACCTACA+TGG + chr4_4:61743879-61743898 Msa0692950:CDS 40.0%
GATTAGTACCATGTAGGTGT+TGG - chr4_4:61743890-61743909 None:intergenic 40.0%
! GCTATAGGCTTTTCAATCTG+AGG - chr4_4:61743916-61743935 None:intergenic 40.0%
AACAAGGAGAATCCTTGCAT+TGG - chr4_4:61744098-61744117 None:intergenic 40.0%
AATGCAAGGATTCTCCTTGT+TGG + chr4_4:61744097-61744116 Msa0692950:CDS 40.0%
!! ATGAACAGTGTGCTGGTTAT+GGG + chr4_4:61744131-61744150 Msa0692950:CDS 40.0%
!!! GAACAAGTTTTAGACGAGGA+AGG + chr4_4:61744161-61744180 Msa0692950:CDS 40.0%
!! CGAGGAAGGTATTATCACTA+TGG + chr4_4:61744175-61744194 Msa0692950:intron 40.0%
AATTACAGGACCCAAGCTAA+TGG - chr4_4:61744305-61744324 None:intergenic 40.0%
GCCATAGATTGTAAGCTGTA+TGG - chr4_4:61744478-61744497 None:intergenic 40.0%
!! TAGCTTTGGACGAGAAATCA+GGG - chr4_4:61744568-61744587 None:intergenic 40.0%
GTCTTCCTTTGTTGGATTTG+AGG + chr4_4:61744656-61744675 Msa0692950:intron 40.0%
ACGAGAGTTTCCATGATTGA+GGG + chr4_4:61744717-61744736 Msa0692950:intron 40.0%
TCAATTAAGCCCCTCAATCA+TGG - chr4_4:61744730-61744749 None:intergenic 40.0%
ATATGCCTTAATCAGTTGGC+TGG + chr4_4:61745058-61745077 Msa0692950:intron 40.0%
TATGCCTTAATCAGTTGGCT+GGG + chr4_4:61745059-61745078 Msa0692950:intron 40.0%
!! ATGTATTGCTGATAACGGGA+AGG + chr4_4:61745148-61745167 Msa0692950:CDS 40.0%
! TTTTTATCACCGATGCCACT+AGG - chr4_4:61745350-61745369 None:intergenic 40.0%
TTGTCGAGTCAGCCAATAAA+TGG - chr4_4:61745464-61745483 None:intergenic 40.0%
CACAAGTATGAGTTCAGTTC+AGG - chr4_4:61745623-61745642 None:intergenic 40.0%
TTCTTCCATGTTCTCATGAG+AGG + chr4_4:61745789-61745808 Msa0692950:intron 40.0%
!! TGCCGGTTCGTCAAAAATAA+AGG + chr4_4:61745827-61745846 Msa0692950:intron 40.0%
TGATCTGATTGGTACGAGTT+TGG - chr4_4:61745898-61745917 None:intergenic 40.0%
GAGTGAAACAGTGATCTGAT+TGG - chr4_4:61745909-61745928 None:intergenic 40.0%
CATGGTACATCGGTATTTGT+CGG - chr4_4:61745964-61745983 None:intergenic 40.0%
AACAACGACTCATGGTACAT+CGG - chr4_4:61745974-61745993 None:intergenic 40.0%
!!! TTCTGGTGATTTTCAAGTGC+CGG + chr4_4:61745999-61746018 Msa0692950:intron 40.0%
GTTGGATCTTCAGACAGAAA+AGG - chr4_4:61746084-61746103 None:intergenic 40.0%
! TGGGAGTCCATTTTCTATGT+TGG - chr4_4:61746102-61746121 None:intergenic 40.0%
GCTTGGTTTATATGAAGCAG+CGG + chr4_4:61746167-61746186 Msa0692950:CDS 40.0%
!! AGTTTGGTTCTAGAATTGCG+AGG + chr4_4:61746298-61746317 Msa0692950:intron 40.0%
!! GTTTGGTTCTAGAATTGCGA+GGG + chr4_4:61746299-61746318 Msa0692950:intron 40.0%
GAATTGCGAGGGAATCAAAT+CGG + chr4_4:61746310-61746329 Msa0692950:CDS 40.0%
AAGTAATCGAGCAGCAAATC+AGG + chr4_4:61746344-61746363 Msa0692950:CDS 40.0%
!!! CTTTATTTTCTCTGGGCATG+TGG + chr4_4:61746416-61746435 Msa0692950:three_prime_UTR 40.0%
TTGGGGAAGTTGAGTGGAAT+GGG - chr4_4:61738460-61738479 None:intergenic 45.0%
TTTGGGGAAGTTGAGTGGAA+TGG - chr4_4:61738461-61738480 None:intergenic 45.0%
!! CTTATTGTCGGTGTCGTATC+CGG + chr4_4:61738579-61738598 Msa0692950:intron 45.0%
ATGACCTGAAAGAAGCTCTG+CGG + chr4_4:61738727-61738746 Msa0692950:CDS 45.0%
AGAAGAGGTCCTGATAGCTT+GGG + chr4_4:61738750-61738769 Msa0692950:CDS 45.0%
TTCTTCACACCCAAGCTATC+AGG - chr4_4:61738762-61738781 None:intergenic 45.0%
TCCACTAAAGGCTGAACAAG+CGG - chr4_4:61738921-61738940 None:intergenic 45.0%
GGATGCTTCTCGAAACATTC+TGG + chr4_4:61738938-61738957 Msa0692950:CDS 45.0%
CTAAAATCAGAGGCAGTTGC+AGG - chr4_4:61738979-61738998 None:intergenic 45.0%
! TCTTCAGGTGAGATTTTCGG+AGG + chr4_4:61739295-61739314 Msa0692950:intron 45.0%
! GACCATGGGCTATCATCTAT+TGG + chr4_4:61739461-61739480 Msa0692950:CDS 45.0%
TGCCAATAGATGATAGCCCA+TGG - chr4_4:61739466-61739485 None:intergenic 45.0%
! ATGGGCTATCATCTATTGGC+AGG + chr4_4:61739465-61739484 Msa0692950:CDS 45.0%
TATTGGCAGGTAACTCCAAG+TGG + chr4_4:61739478-61739497 Msa0692950:intron 45.0%
AGGATAGTTCAAGGACCCTT+TGG + chr4_4:61739586-61739605 Msa0692950:intron 45.0%
AGTTCAAGGACCCTTTGGTT+TGG + chr4_4:61739591-61739610 Msa0692950:CDS 45.0%
ATGGAGCGAAAACTTATCGG+TGG - chr4_4:61740038-61740057 None:intergenic 45.0%
! CCACTAGCCTACTAGTTGAT+GGG + chr4_4:61740112-61740131 Msa0692950:intron 45.0%
CCAAGTTCCCATCAACTAGT+AGG - chr4_4:61740122-61740141 None:intergenic 45.0%
!! CCTACTAGTTGATGGGAACT+TGG + chr4_4:61740119-61740138 Msa0692950:intron 45.0%
TGACAACAGGTCTATTCGCT+GGG - chr4_4:61740361-61740380 None:intergenic 45.0%
ATGACAACAGGTCTATTCGC+TGG - chr4_4:61740362-61740381 None:intergenic 45.0%
! CATCCTGCCCTAAGTTTTCT+AGG + chr4_4:61740625-61740644 Msa0692950:CDS 45.0%
! TCCTGCCCTAAGTTTTCTAG+GGG + chr4_4:61740627-61740646 Msa0692950:CDS 45.0%
GTTGCCCCCTAGAAAACTTA+GGG - chr4_4:61740635-61740654 None:intergenic 45.0%
TGTTGCCCCCTAGAAAACTT+AGG - chr4_4:61740636-61740655 None:intergenic 45.0%
AGCAACATATGAGCTCGCAT+TGG - chr4_4:61740882-61740901 None:intergenic 45.0%
CAAGTTTGAGTCGTGGAATC+AGG - chr4_4:61741236-61741255 None:intergenic 45.0%
CGAGTGACTATAAAGGTGAC+AGG - chr4_4:61741263-61741282 None:intergenic 45.0%
GGCTAAAAGACAAGACAAGG+GGG + chr4_4:61741385-61741404 Msa0692950:intron 45.0%
!! AATTCTTTTCTCTGGTGGGC+TGG + chr4_4:61741993-61742012 Msa0692950:CDS 45.0%
!! TATAGGGAGCACTCACAACT+GGG - chr4_4:61742060-61742079 None:intergenic 45.0%
!! TTATAGGGAGCACTCACAAC+TGG - chr4_4:61742061-61742080 None:intergenic 45.0%
GTCATGAACTAACTGCCAAC+AGG + chr4_4:61742134-61742153 Msa0692950:intron 45.0%
GAAACTGTGTGTTCTCCTCT+GGG - chr4_4:61742329-61742348 None:intergenic 45.0%
TGAAACTGTGTGTTCTCCTC+TGG - chr4_4:61742330-61742349 None:intergenic 45.0%
CAAAGAGCTCTTGTGTAAGG+GGG - chr4_4:61742440-61742459 None:intergenic 45.0%
CCAAAGAGCTCTTGTGTAAG+GGG - chr4_4:61742441-61742460 None:intergenic 45.0%
CCCAAAGAGCTCTTGTGTAA+GGG - chr4_4:61742442-61742461 None:intergenic 45.0%
CCCTTACACAAGAGCTCTTT+GGG + chr4_4:61742439-61742458 Msa0692950:intron 45.0%
GGATCAAATTCTAGACCACG+TGG + chr4_4:61742525-61742544 Msa0692950:intron 45.0%
GAACTCGACCAGTCTACTTT+AGG - chr4_4:61742678-61742697 None:intergenic 45.0%
! GCCTTGGCAGATTTTCTATC+AGG - chr4_4:61742815-61742834 None:intergenic 45.0%
GATAGAAAATCTGCCAAGGC+AGG + chr4_4:61742815-61742834 Msa0692950:CDS 45.0%
TAGTTCTTTCAACCCTGCCT+TGG - chr4_4:61742831-61742850 None:intergenic 45.0%
AAAGAGTTGCACCGTCAAGA+CGG + chr4_4:61742852-61742871 Msa0692950:CDS 45.0%
TGGATTGCATACCGTCTTGA+CGG - chr4_4:61742866-61742885 None:intergenic 45.0%
TCTTGACTAAGATCGGGAGA+AGG + chr4_4:61743535-61743554 Msa0692950:intron 45.0%
GTAGCAAGATCGCAACATGT+AGG + chr4_4:61743557-61743576 Msa0692950:intron 45.0%
AGTAATTACGAAGGATCGGG+AGG - chr4_4:61743611-61743630 None:intergenic 45.0%
CCCGATCCTTCGTAATTACT+TGG + chr4_4:61743611-61743630 Msa0692950:intron 45.0%
CAACATGTGAGGTCGTAACT+AGG - chr4_4:61743651-61743670 None:intergenic 45.0%
TAGCAAGATCGCAACATGTG+AGG - chr4_4:61743662-61743681 None:intergenic 45.0%
TCTTGACTTAGACTGGAAGC+AGG - chr4_4:61743685-61743704 None:intergenic 45.0%
!! TAGCATCGGTCATGTTCAGT+TGG + chr4_4:61743759-61743778 Msa0692950:intron 45.0%
!! AGTACCATGTAGGTGTTGGA+AGG - chr4_4:61743886-61743905 None:intergenic 45.0%
!! ATAGCTTTATGGCTCGCTTC+TGG + chr4_4:61744007-61744026 Msa0692950:CDS 45.0%
!! AGGATTCTCCTTGTTGGTTC+TGG + chr4_4:61744103-61744122 Msa0692950:CDS 45.0%
!! GATGAACAGTGTGCTGGTTA+TGG + chr4_4:61744130-61744149 Msa0692950:CDS 45.0%
! GACCCAAGCTAATGGACAAA+AGG - chr4_4:61744297-61744316 None:intergenic 45.0%
!! AGCTTTGGACGAGAAATCAG+GGG - chr4_4:61744567-61744586 None:intergenic 45.0%
!! GTAGCTTTGGACGAGAAATC+AGG - chr4_4:61744569-61744588 None:intergenic 45.0%
GACGAGAGTTTCCATGATTG+AGG + chr4_4:61744716-61744735 Msa0692950:intron 45.0%
CGAGAGTTTCCATGATTGAG+GGG + chr4_4:61744718-61744737 Msa0692950:intron 45.0%
ATGCCTTAATCAGTTGGCTG+GGG + chr4_4:61745060-61745079 Msa0692950:intron 45.0%
!! TATTGCTGATAACGGGAAGG+AGG + chr4_4:61745151-61745170 Msa0692950:CDS 45.0%
ACTCAACATTCCATTGTGGG+AGG + chr4_4:61745307-61745326 Msa0692950:CDS 45.0%
CTTGATCAACCTAGTGGCAT+CGG + chr4_4:61745338-61745357 Msa0692950:CDS 45.0%
TTCAGTTCAGGCAACATCAC+TGG - chr4_4:61745611-61745630 None:intergenic 45.0%
!!! TTTTATGGCGGGTTCTACTG+TGG + chr4_4:61745670-61745689 Msa0692950:intron 45.0%
TTGTCGGAAGTAGAAGTTCG+CGG - chr4_4:61745948-61745967 None:intergenic 45.0%
GATGTACCATGAGTCGTTGT+TGG + chr4_4:61745973-61745992 Msa0692950:intron 45.0%
GAAACTCCAACAACGACTCA+TGG - chr4_4:61745982-61746001 None:intergenic 45.0%
TGAGTCGTTGTTGGAGTTTC+TGG + chr4_4:61745982-61746001 Msa0692950:intron 45.0%
CTGAAGGTTGCACAATTGCT+TGG + chr4_4:61746150-61746169 Msa0692950:intron 45.0%
!!! AAAGTTTTGGAGTGCACACC+TGG - chr4_4:61746212-61746231 None:intergenic 45.0%
CAGGCAGTGTAAGGATTTGT+AGG + chr4_4:61746373-61746392 Msa0692950:CDS 45.0%
! GCATGTGGGACTCATCTTTT+TGG + chr4_4:61746431-61746450 Msa0692950:three_prime_UTR 45.0%
!! TAAATAAATAAATCAATAAA+TGG - chr4_4:61740733-61740752 None:intergenic 5.0%
!!! ATATTGAATTTTATTTTTTT+TGG + chr4_4:61743048-61743067 Msa0692950:intron 5.0%
!!! AAATTTTTTTATATATGAAT+TGG + chr4_4:61746479-61746498 Msa0692950:three_prime_UTR 5.0%
! GGAATTGCATTGACCGTCTC+AGG + chr4_4:61738410-61738429 Msa0692950:CDS 50.0%
AGTTGAGTGGAATGGGAGAG+AGG - chr4_4:61738453-61738472 None:intergenic 50.0%
CACTGAGACAACACAGACAC+CGG - chr4_4:61738601-61738620 None:intergenic 50.0%
TTCTCCGCAGAGCTTCTTTC+AGG - chr4_4:61738734-61738753 None:intergenic 50.0%
AAAGAAGCTCTGCGGAGAAG+AGG + chr4_4:61738735-61738754 Msa0692950:CDS 50.0%
GAGAAGAGGTCCTGATAGCT+TGG + chr4_4:61738749-61738768 Msa0692950:CDS 50.0%
TCGGTGCAACTTTGCAGCTT+AGG + chr4_4:61738886-61738905 Msa0692950:CDS 50.0%
CGGTGCAACTTTGCAGCTTA+GGG + chr4_4:61738887-61738906 Msa0692950:CDS 50.0%
GGTGCAACTTTGCAGCTTAG+GGG + chr4_4:61738888-61738907 Msa0692950:CDS 50.0%
TCCGCTTGTTCAGCCTTTAG+TGG + chr4_4:61738917-61738936 Msa0692950:CDS 50.0%
CTTGGGAATTGTTGCTCCTG+TGG + chr4_4:61739367-61739386 Msa0692950:CDS 50.0%
TGCATCTCGGCCAAACCAAA+GGG - chr4_4:61739604-61739623 None:intergenic 50.0%
ATGCATCTCGGCCAAACCAA+AGG - chr4_4:61739605-61739624 None:intergenic 50.0%
! TGGTTTGGCCGAGATGCATT+TGG + chr4_4:61739606-61739625 Msa0692950:CDS 50.0%
TTGGCCGAGATGCATTTGGT+AGG + chr4_4:61739610-61739629 Msa0692950:CDS 50.0%
TCCGCCTACCAAATGCATCT+CGG - chr4_4:61739617-61739636 None:intergenic 50.0%
CTGTAGGCCAGTGAACAAGA+AGG - chr4_4:61739641-61739660 None:intergenic 50.0%
CTACTGGTGTCTTGCTCTGA+TGG + chr4_4:61739755-61739774 Msa0692950:intron 50.0%
CAACTAGTAGGCTAGTGGCA+GGG - chr4_4:61740110-61740129 None:intergenic 50.0%
TCAACTAGTAGGCTAGTGGC+AGG - chr4_4:61740111-61740130 None:intergenic 50.0%
! GCCACTAGCCTACTAGTTGA+TGG + chr4_4:61740111-61740130 Msa0692950:intron 50.0%
CCCATCAACTAGTAGGCTAG+TGG - chr4_4:61740115-61740134 None:intergenic 50.0%
! AGTGTTGAGGCCTTAGAGCA+GGG - chr4_4:61740221-61740240 None:intergenic 50.0%
!! AAGTGTTGAGGCCTTAGAGC+AGG - chr4_4:61740222-61740241 None:intergenic 50.0%
ACAACAGGTCTATTCGCTGG+GGG - chr4_4:61740359-61740378 None:intergenic 50.0%
GACAACAGGTCTATTCGCTG+GGG - chr4_4:61740360-61740379 None:intergenic 50.0%
TACTGGGAAGAGCTACCATG+TGG + chr4_4:61740456-61740475 Msa0692950:CDS 50.0%
! GTCTGCAGGTTTTCAGAGCT+TGG - chr4_4:61740606-61740625 None:intergenic 50.0%
! CCTGCCCTAAGTTTTCTAGG+GGG + chr4_4:61740628-61740647 Msa0692950:CDS 50.0%
AGGCTCACAAGTTTGAGTCG+TGG - chr4_4:61741243-61741262 None:intergenic 50.0%
!! AAGACAAGGGGGTATTGCAC+AGG + chr4_4:61741396-61741415 Msa0692950:intron 50.0%
! GGGTATTGCACAGGAACGAT+GGG + chr4_4:61741405-61741424 Msa0692950:intron 50.0%
GGCATTACTGGATCAATGCC+TGG + chr4_4:61742032-61742051 Msa0692950:CDS 50.0%
GTGCTTCACCCAACAGCTTA+AGG - chr4_4:61742393-61742412 None:intergenic 50.0%
CCCCTTACACAAGAGCTCTT+TGG + chr4_4:61742438-61742457 Msa0692950:intron 50.0%
GCCCAAAGAGCTCTTGTGTA+AGG - chr4_4:61742443-61742462 None:intergenic 50.0%
TTCTAGACCACGTGGTCAAC+TGG + chr4_4:61742533-61742552 Msa0692950:intron 50.0%
TCTATGACCAGTTGACCACG+TGG - chr4_4:61742543-61742562 None:intergenic 50.0%
ACGTGGTCAACTGGTCATAG+AGG + chr4_4:61742542-61742561 Msa0692950:intron 50.0%
AATTACGAAGGATCGGGAGG+CGG - chr4_4:61743608-61743627 None:intergenic 50.0%
! GCATCTGTTGAAAGTGCAGG+TGG + chr4_4:61743788-61743807 Msa0692950:intron 50.0%
CATCAGCACCAGAACCAACA+AGG - chr4_4:61744114-61744133 None:intergenic 50.0%
TAGCCCCAGCCAACTGATTA+AGG - chr4_4:61745066-61745085 None:intergenic 50.0%
GCCAACCTTGATCAACCTAG+TGG + chr4_4:61745332-61745351 Msa0692950:CDS 50.0%
!! GCCACTAGGTTGATCAAGGT+TGG - chr4_4:61745336-61745355 None:intergenic 50.0%
!! CGATGCCACTAGGTTGATCA+AGG - chr4_4:61745340-61745359 None:intergenic 50.0%
GGGGTGACATAGTTCATCGT+TGG - chr4_4:61745750-61745769 None:intergenic 50.0%
CAACGCCTCTCATGAGAACA+TGG - chr4_4:61745797-61745816 None:intergenic 50.0%
!! ATGAGAGGCGTTGACCTGAT+CGG + chr4_4:61745804-61745823 Msa0692950:intron 50.0%
!! TTTCAAGTGCCGGTACACCA+TGG + chr4_4:61746009-61746028 Msa0692950:intron 50.0%
GCAAATGGTCCATGGTGTAC+CGG - chr4_4:61746021-61746040 None:intergenic 50.0%
! GGCGATTTGGGGAAGTTGAG+TGG - chr4_4:61738466-61738485 None:intergenic 55.0%
GCCGAGATGCATTTGGTAGG+CGG + chr4_4:61739613-61739632 Msa0692950:CDS 55.0%
ATACCAGTGGCCTGCTGATC+TGG - chr4_4:61739708-61739727 None:intergenic 55.0%
GTGTTGAGGCCTTAGAGCAG+GGG - chr4_4:61740220-61740239 None:intergenic 55.0%
ATTCGCTGGGGGAGTTAGAG+TGG - chr4_4:61740348-61740367 None:intergenic 55.0%
ACTTAGGGCAGGATGTCTGC+AGG - chr4_4:61740620-61740639 None:intergenic 55.0%
CCCCCTAGAAAACTTAGGGC+AGG - chr4_4:61740631-61740650 None:intergenic 55.0%
GAGACAGTTCCATGCGAAGC+AGG + chr4_4:61740678-61740697 Msa0692950:CDS 55.0%
!! GGGGTATTGCACAGGAACGA+TGG + chr4_4:61741404-61741423 Msa0692950:intron 55.0%
TGCACAGGAACGATGGGAAG+TGG + chr4_4:61741411-61741430 Msa0692950:intron 55.0%
AGCACTCACAACTGGGATCC+AGG - chr4_4:61742053-61742072 None:intergenic 55.0%
ATTACGAAGGATCGGGAGGC+GGG - chr4_4:61743607-61743626 None:intergenic 55.0%
AAAGTGCAGGTGGAGACTCG+TGG + chr4_4:61743798-61743817 Msa0692950:intron 55.0%
GCTTTATGGCTCGCTTCTGG+TGG + chr4_4:61744010-61744029 Msa0692950:CDS 55.0%
!! TCGCTTCTGGTGGTGATGGA+TGG + chr4_4:61744020-61744039 Msa0692950:CDS 55.0%
!! CGCTTCTGGTGGTGATGGAT+GGG + chr4_4:61744021-61744040 Msa0692950:CDS 55.0%
!! GGTGCTGATGAACAGTGTGC+TGG + chr4_4:61744124-61744143 Msa0692950:CDS 55.0%
AGGTTGGCAACCTCCCACAA+TGG - chr4_4:61745320-61745339 None:intergenic 55.0%
AAGCAGCGGTTCTTCCCAAG+CGG + chr4_4:61746181-61746200 Msa0692950:CDS 55.0%
GGCGGAGCCTTCTTGTTCAC+TGG + chr4_4:61739631-61739650 Msa0692950:CDS 60.0%
GCCAGTTGCTCCAGATCAGC+AGG + chr4_4:61739695-61739714 Msa0692950:CDS 60.0%
! GCCTGCTGATCTGGAGCAAC+TGG - chr4_4:61739699-61739718 None:intergenic 60.0%
! TGGCTCGCTTCTGGTGGTGA+TGG + chr4_4:61744016-61744035 Msa0692950:CDS 60.0%
CAGTTGGCTGGGGCTAGATG+AGG + chr4_4:61745070-61745089 Msa0692950:intron 60.0%
!! TTGACGAACCGGCACCGATC+AGG - chr4_4:61745821-61745840 None:intergenic 60.0%
AGCAGCGGTTCTTCCCAAGC+GGG + chr4_4:61746182-61746201 Msa0692950:CDS 60.0%
TCTTCCCAAGCGGGCAATCC+AGG + chr4_4:61746191-61746210 Msa0692950:CDS 60.0%
CACACCTGGATTGCCCGCTT+GGG - chr4_4:61746198-61746217 None:intergenic 60.0%
GCAGCAAATCAGGCGTCTGC+AGG + chr4_4:61746354-61746373 Msa0692950:CDS 60.0%
AGGCGTCTGCAGGCAGTGTA+AGG + chr4_4:61746364-61746383 Msa0692950:CDS 60.0%
GCTCCAGATCAGCAGGCCAC+TGG + chr4_4:61739702-61739721 Msa0692950:CDS 65.0%
GGTCGCTCACCCCTGCTCTA+AGG + chr4_4:61740208-61740227 Msa0692950:intron 65.0%
!! GGCGTTGACCTGATCGGTGC+CGG + chr4_4:61745810-61745829 Msa0692950:intron 65.0%
GCACACCTGGATTGCCCGCT+TGG - chr4_4:61746199-61746218 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61738393 61746540 61738393 ID=Msa0692950;Name=Msa0692950
chr4_4 mRNA 61738393 61746540 61738393 ID=Msa0692950-mRNA-1;Parent=Msa0692950;Name=Msa0692950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=11|1|1|1|1|1|14|127|647
chr4_4 exon 61738393 61738496 61738393 ID=Msa0692950-mRNA-1:exon:17125;Parent=Msa0692950-mRNA-1
chr4_4 exon 61738711 61738969 61738711 ID=Msa0692950-mRNA-1:exon:17126;Parent=Msa0692950-mRNA-1
chr4_4 exon 61739302 61739486 61739302 ID=Msa0692950-mRNA-1:exon:17127;Parent=Msa0692950-mRNA-1
chr4_4 exon 61739588 61739723 61739588 ID=Msa0692950-mRNA-1:exon:17128;Parent=Msa0692950-mRNA-1
chr4_4 exon 61740421 61740699 61740421 ID=Msa0692950-mRNA-1:exon:17129;Parent=Msa0692950-mRNA-1
chr4_4 exon 61740859 61740956 61740859 ID=Msa0692950-mRNA-1:exon:17130;Parent=Msa0692950-mRNA-1
chr4_4 exon 61741949 61742063 61741949 ID=Msa0692950-mRNA-1:exon:17131;Parent=Msa0692950-mRNA-1
chr4_4 exon 61742768 61742873 61742768 ID=Msa0692950-mRNA-1:exon:17132;Parent=Msa0692950-mRNA-1
chr4_4 exon 61743807 61743900 61743807 ID=Msa0692950-mRNA-1:exon:17133;Parent=Msa0692950-mRNA-1
chr4_4 exon 61743992 61744182 61743992 ID=Msa0692950-mRNA-1:exon:17134;Parent=Msa0692950-mRNA-1
chr4_4 exon 61745073 61745172 61745073 ID=Msa0692950-mRNA-1:exon:17135;Parent=Msa0692950-mRNA-1
chr4_4 exon 61745266 61745382 61745266 ID=Msa0692950-mRNA-1:exon:17136;Parent=Msa0692950-mRNA-1
chr4_4 exon 61746156 61746212 61746156 ID=Msa0692950-mRNA-1:exon:17137;Parent=Msa0692950-mRNA-1
chr4_4 exon 61746300 61746540 61746300 ID=Msa0692950-mRNA-1:exon:17138;Parent=Msa0692950-mRNA-1
chr4_4 five_prime_UTR 61738393 61738403 61738393 ID=Msa0692950-mRNA-1:five_prime_utr;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61738404 61738496 61738404 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61738711 61738969 61738711 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61739302 61739486 61739302 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61739588 61739723 61739588 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61740421 61740699 61740421 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61740859 61740956 61740859 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61741949 61742063 61741949 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61742768 61742873 61742768 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61743807 61743900 61743807 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61743992 61744182 61743992 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61745073 61745172 61745073 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61745266 61745382 61745266 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61746156 61746212 61746156 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 CDS 61746300 61746413 61746300 ID=Msa0692950-mRNA-1:cds;Parent=Msa0692950-mRNA-1
chr4_4 three_prime_UTR 61746414 61746540 61746414 ID=Msa0692950-mRNA-1:three_prime_utr;Parent=Msa0692950-mRNA-1
Gene Sequence

>Msa0692950

ATGTGTGGAATTGCATTGACCGTCTCAGGCATTCGAATTAACATCTCCTCTCTCCCATTCCACTCAACTTCCCCAAATCGCCAATCTGAAAATTTGTTGATCTCTTTAGATGACCTGAAAGAAGCTCTGCGGAGAAGAGGTCCTGATAGCTTGGGTGTGAAGAAAGTTACTCTGCAACACAATGAAAACCAAATCTCATCCTTTATAGAACACGACGAAACGTTATTGTGTTCTGCAAATGAAGACAGTAACGGAGAACTTCATTTCATCGGTGCAACTTTGCAGCTTAGGGGAATTGTTCCGCTTGTTCAGCCTTTAGTGGATGCTTCTCGAAACATTCTGGTGTATAATGGTGAGATTTTCGGAGGACTTCAACTTGCTAGTGATTGCAACGATGCCGAGTTTCTTATGCAGACTCTTGGGAATTGTTGCTCCTGTGGTTCTTATTTGACTGGTAACTGTGTTAAATGCGGGAAAGGTTCTATTACAGATGTTCTTTCTACAATTAAAGGACCATGGGCTATCATCTATTGGCAGGATAGTTCAAGGACCCTTTGGTTTGGCCGAGATGCATTTGGTAGGCGGAGCCTTCTTGTTCACTGGCCTACAGAAGATGATTCAACTTTTCTTCTTTCTTCTGTATCGCCAGTTGCTCCAGATCAGCAGGCCACTGAAAATGAAGCTCATAATGGAATTGAACATCTTAGTTACTGGGAAGAGCTACCATGTGGAATATATAGTATGCACGTGGATGCTTCGAATTCAAACGGATTTCTGGTTGGCGAAGTTCAGATACATGAATATACAAACTCAACATTGAAGGAACTTATCAAGTGGGAGAGAATTTCTGTTGTACCAAGCTCTGAAAACCTGCAGACATCCTGCCCTAAGTTTTCTAGGGGGCAACAAGATGTACATTCAGCTTCTTTAGAGACAGTTCCATGCGAAGCAGGCTCAACTCAAAATTCAATTCCAATGCGAGCTCATATGTTGCTAAATGTTTTAAAGGAATCTGTGATACGACGTACGTCATTGTATACTATCTATCAGGCTGTGATATCTGGTATCAAACAAGAGAAATTTGTTCCTGTTGCAATTCTTTTCTCTGGTGGGCTGGATTCTATGATACTTGCGGCATTACTGGATCAATGCCTGGATCCCAGTTATGAAATTGATCTACTTACTGTAAGCTTTGATGGCGAGTTAGCTCCTGATAGAAAATCTGCCAAGGCAGGGTTGAAAGAACTAAAAAGAGTTGCACCGTCAAGACGGTGGAGACTCGTGGAGATTGATGCTGACTTGTCAGATTTGGTGTCTGAGACTAGTCATGTTATGTCACTCATAAATCCTTCCAACACCTACATGGACCTTAACATTGGAATAGCTTTATGGCTCGCTTCTGGTGGTGATGGATGGGTGTCTGATGCAGATGATAATGATGACACTCATGCACGGATTAAATACAAGTCCAATGCAAGGATTCTCCTTGTTGGTTCTGGTGCTGATGAACAGTGTGCTGGTTATGGGAGACATAGAACAAGTTTTAGACGAGGAAGTTGGCTGGGGCTAGATGAGGAAATGAAACTCGACATGCAAAGAATTTGGAAGAGAAATTTAGGGAGAGATGATAGATGTATTGCTGATAACGGGAAGGAGGCTAGATTTCCATTCTTGGATGAGGATGTTATAAGGGTTTTACTCAACATTCCATTGTGGGAGGTTGCCAACCTTGATCAACCTAGTGGCATCGGTGATAAAAAGATTTTAAGAGAGGTTGCACAATTGCTTGGTTTATATGAAGCAGCGGTTCTTCCCAAGCGGGCAATCCAGTTTGGTTCTAGAATTGCGAGGGAATCAAATCGGAAGAATTTTGGAAGTAATCGAGCAGCAAATCAGGCGTCTGCAGGCAGTGTAAGGATTTGTAGGAAATCAAATTTTGGTTGA

Protein sequence

>Msa0692950

MCGIALTVSGIRINISSLPFHSTSPNRQSENLLISLDDLKEALRRRGPDSLGVKKVTLQHNENQISSFIEHDETLLCSANEDSNGELHFIGATLQLRGIVPLVQPLVDASRNILVYNGEIFGGLQLASDCNDAEFLMQTLGNCCSCGSYLTGNCVKCGKGSITDVLSTIKGPWAIIYWQDSSRTLWFGRDAFGRRSLLVHWPTEDDSTFLLSSVSPVAPDQQATENEAHNGIEHLSYWEELPCGIYSMHVDASNSNGFLVGEVQIHEYTNSTLKELIKWERISVVPSSENLQTSCPKFSRGQQDVHSASLETVPCEAGSTQNSIPMRAHMLLNVLKESVIRRTSLYTIYQAVISGIKQEKFVPVAILFSGGLDSMILAALLDQCLDPSYEIDLLTVSFDGELAPDRKSAKAGLKELKRVAPSRRWRLVEIDADLSDLVSETSHVMSLINPSNTYMDLNIGIALWLASGGDGWVSDADDNDDTHARIKYKSNARILLVGSGADEQCAGYGRHRTSFRRGSWLGLDEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRVLLNIPLWEVANLDQPSGIGDKKILREVAQLLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVRICRKSNFG*