AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175810 MtrunA17_Chr1g0197251 94.022 987 28 2 1 986 15 971 0.0 1909
Msa0175810 MtrunA17_Chr3g0132391 30.168 358 193 14 280 621 200 516 2.10e-22 103
Msa0175810 MtrunA17_Chr8g0389131 27.551 294 151 13 280 552 172 424 5.66e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175810 AT5G04360.1 69.029 917 252 3 68 984 79 963 0.0 1319
Msa0175810 AT5G04360.2 69.029 917 252 3 68 984 79 963 0.0 1319
Msa0175810 AT4G09020.1 30.195 308 167 12 323 621 235 503 1.84e-22 104
Msa0175810 AT2G39930.1 27.066 351 189 14 323 647 217 526 3.29e-15 80.9
Msa0175810 AT2G39930.3 27.066 351 189 14 323 647 217 526 3.34e-15 80.5
Msa0175810 AT2G39930.2 27.066 351 189 14 323 647 217 526 6.84e-15 79.7

Find 268 sgRNAs with CRISPR-Local

Find 776 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGACATTGTGAGCTTAA+AGG 0.181249 1_4:+61935017 Msa0175810:CDS
GATGGTCATGATGGCTTTCC+TGG 0.187776 1_4:+61936665 Msa0175810:CDS
TCTTAAACCTGTTGCGTATA+AGG 0.214452 1_4:+61936259 Msa0175810:CDS
AATCTTGCTGGAACACAAAT+TGG 0.219718 1_4:+61931281 Msa0175810:CDS
TTACATACAATTCCAATAAC+TGG 0.246376 1_4:+61935766 Msa0175810:CDS
ACTGGACCATCGCTGGTTTC+TGG 0.249604 1_4:+61936620 Msa0175810:CDS
AAAGGTACAACCCTGTTCTT+TGG 0.254002 1_4:+61929414 Msa0175810:intron
ATCTGAGAAAGAATGTAAAA+TGG 0.261799 1_4:-61928070 None:intergenic
CTCAAGAGGAACAATTTCTA+TGG 0.266292 1_4:-61927691 None:intergenic
TATTGTACTCAAGAGCTTAT+TGG 0.266539 1_4:+61925835 Msa0175810:CDS
GCATTTATGAATTGCATATA+AGG 0.271022 1_4:+61928097 Msa0175810:CDS
AGTTATATCCATCAAAGTTT+TGG 0.272406 1_4:-61929309 None:intergenic
GAATGTGAATGCTTTGTTTC+GGG 0.273854 1_4:+61937096 Msa0175810:three_prime_UTR
GAATACACTTACAGTCTCTA+TGG 0.277135 1_4:-61934798 None:intergenic
TGTAATTATTACATTATTAT+CGG 0.278795 1_4:-61937132 None:intergenic
AAGACCAACACCCCAGTTAT+TGG 0.280956 1_4:-61935778 None:intergenic
TTATCTTGCCTTTACTTTGA+TGG 0.287158 1_4:+61928535 Msa0175810:CDS
TTACTTGCATAGCTGCCTTT+AGG 0.287306 1_4:-61929443 None:intergenic
AATTGCATATAAGGGATTTC+AGG 0.294083 1_4:+61928106 Msa0175810:CDS
ATTGTACTCAAGAGCTTATT+GGG 0.294199 1_4:+61925836 Msa0175810:CDS
AGTGATTATGATGCTAGTTT+TGG 0.295966 1_4:+61937155 Msa0175810:three_prime_UTR
TTGCCAACATTTCAATTTGC+TGG 0.298068 1_4:+61928778 Msa0175810:CDS
TCAAAATATGAGGCTTCTTC+TGG 0.304044 1_4:+61937012 Msa0175810:CDS
AATGTTGATCATCATCAAAA+TGG 0.306446 1_4:+61925882 Msa0175810:CDS
ATTTGGCCACCCTCTTCAAC+AGG 0.307402 1_4:+61931642 Msa0175810:CDS
CATAAATAACAACCGCCAAC+TGG 0.312601 1_4:-61927096 None:intergenic
TACAATCATTTGCAGGGAAA+TGG 0.314634 1_4:+61929706 Msa0175810:CDS
TACTTGCATAGCTGCCTTTA+GGG 0.319608 1_4:-61929442 None:intergenic
ATTGAAGATTTCTTGATTGC+AGG 0.319654 1_4:-61936854 None:intergenic
CTTTCCTGGGTTGTCTCAGC+TGG 0.320329 1_4:+61936679 Msa0175810:CDS
CAATGGCAGTAGTAGATAAA+TGG 0.329557 1_4:+61933965 Msa0175810:CDS
GAAGGGAAAGAAAGTGAAAA+TGG 0.334303 1_4:-61925534 None:intergenic
AAGGTACAACCCTGTTCTTT+GGG 0.334500 1_4:+61929415 Msa0175810:intron
AAAGGGTGTATTACATTTGC+AGG 0.339070 1_4:-61926445 None:intergenic
AAAACTTTGATGGATATAAC+TGG 0.339150 1_4:+61929311 Msa0175810:CDS
AGATAACCACCGCGAAATTC+AGG 0.345010 1_4:-61928518 None:intergenic
CGAAACTCAATTGTACGGTT+TGG 0.349317 1_4:-61929476 None:intergenic
GCTTCTCAGTTCAATCTTGC+TGG 0.349733 1_4:+61931269 Msa0175810:CDS
TACTGTCTACAATCATTTGC+AGG 0.352877 1_4:+61929699 Msa0175810:CDS
TTGAGGAGGAACACGGTGTT+TGG 0.355434 1_4:+61927709 Msa0175810:CDS
GGGTTCAGATTTGACCTTAT+GGG 0.356426 1_4:+61930475 Msa0175810:CDS
CATTTATGAATTGCATATAA+GGG 0.359251 1_4:+61928098 Msa0175810:CDS
ATTTCTAATTCTCAAATTCA+AGG 0.359701 1_4:+61925945 Msa0175810:CDS
ATTGAAATGTTGGCAATAGA+TGG 0.361387 1_4:-61928771 None:intergenic
TGGGTTCAGATTTGACCTTA+TGG 0.365737 1_4:+61930474 Msa0175810:CDS
ATCCTATTTCTGCAGCCTAA+TGG 0.365977 1_4:+61932038 Msa0175810:intron
TCTTCAATTGCATCCCGTTC+AGG 0.367312 1_4:+61936869 Msa0175810:CDS
TGAGTTTCGTAAGATGGTTC+AGG 0.374682 1_4:+61929490 Msa0175810:CDS
ATTGTACGGTTTGGACCATT+TGG 0.375344 1_4:-61929467 None:intergenic
GTTCAAAGAAGCATCTTTGC+TGG 0.377209 1_4:-61925922 None:intergenic
CGAATTCGTGATTCCGTGCT+TGG 0.380874 1_4:+61931610 Msa0175810:CDS
TGTATCTTATAGATTGTTCC+AGG 0.381127 1_4:+61929890 Msa0175810:intron
ACAGCCATCCAAAACTTTGA+TGG 0.383081 1_4:+61929301 Msa0175810:CDS
AAGAGAACTAATATCTGAAC+TGG 0.387617 1_4:-61927065 None:intergenic
GACTGGCAGACCCATCCTTC+AGG 0.389756 1_4:+61936199 Msa0175810:CDS
GTGCTTGGTGGATCTCCATT+TGG 0.393201 1_4:+61931625 Msa0175810:CDS
TACAATTGAGTTTCGTAAGA+TGG 0.394970 1_4:+61929484 Msa0175810:CDS
TGTACTGGTTTGCAGTTACC+TGG 0.404064 1_4:+61927424 Msa0175810:CDS
TTAGGGACACCCCAAAGAAC+AGG 0.407237 1_4:-61929425 None:intergenic
TGTTAAGAGTTCAAAATATG+AGG 0.409680 1_4:+61937002 Msa0175810:CDS
TCAAACTACTTCCATTTCTC+AGG 0.410019 1_4:+61925698 Msa0175810:CDS
AAAGAAAAGGATGGAGTTGA+TGG 0.412794 1_4:+61931039 Msa0175810:CDS
GTTCTTTGGGGTGTCCCTAA+AGG 0.412927 1_4:+61929428 Msa0175810:CDS
ATCCATGCTTTCTGCATCAA+TGG 0.413531 1_4:+61932091 Msa0175810:CDS
TGCCAACATTTCAATTTGCT+GGG 0.414102 1_4:+61928779 Msa0175810:CDS
ATGTTGATCATCATCAAAAT+GGG 0.418159 1_4:+61925883 Msa0175810:CDS
CTATAACACTTGTTGCCAAA+TGG 0.418707 1_4:-61935184 None:intergenic
GTTTATTAGATTGGAATGGC+TGG 0.421115 1_4:+61932831 Msa0175810:intron
TCTGAGAAAGAATGTAAAAT+GGG 0.421282 1_4:-61928069 None:intergenic
ACCTGATGGATGGGAAAATC+TGG 0.421396 1_4:+61928035 Msa0175810:CDS
AGAGAAGAAGAAAGAGGTGG+TGG 0.422195 1_4:-61925657 None:intergenic
TGAGGATTTGAAAATTAAGC+TGG 0.425602 1_4:+61926402 Msa0175810:CDS
AAGGATGGGTCTGCCAGTCT+TGG 0.429846 1_4:-61936195 None:intergenic
AATTAAGCTGGAAGAGGATA+AGG 0.430838 1_4:+61926414 Msa0175810:CDS
AAGAATACCTTATACGCAAC+AGG 0.431710 1_4:-61936266 None:intergenic
GTTCCATGATCATAGCCATT+AGG 0.433887 1_4:-61932053 None:intergenic
ACACTGGGCAGTCAATTATA+AGG 0.435933 1_4:+61930021 Msa0175810:CDS
TTGATGATCAAAAGGAGAAC+TGG 0.439290 1_4:+61928803 Msa0175810:CDS
TCCTTTGAGGCCTGAAGGAT+GGG 0.439467 1_4:-61936209 None:intergenic
ACAATCATTTGCAGGGAAAT+GGG 0.440654 1_4:+61929707 Msa0175810:CDS
TTGCAGGCTCTTAGTCATAC+TGG 0.444576 1_4:+61929658 Msa0175810:intron
TCTGATAGATACGTCGGTAC+TGG 0.447407 1_4:+61929237 Msa0175810:intron
TGAACATTCTGTCCTTGATA+AGG 0.447650 1_4:+61929738 Msa0175810:CDS
TACATCTATAAGCACCCATC+AGG 0.449510 1_4:+61927660 Msa0175810:CDS
TAAACATACCCTCTAGCATA+TGG 0.454189 1_4:-61927834 None:intergenic
TGCTGGGGTTGATGATCAAA+AGG 0.454795 1_4:+61928795 Msa0175810:CDS
TCACTCAATCTCTTATTGCT+TGG 0.455402 1_4:+61925859 Msa0175810:CDS
GTTTGAATAAACCTGAGAAA+TGG 0.456732 1_4:-61925709 None:intergenic
TGAATGTGAATGCTTTGTTT+CGG 0.461091 1_4:+61937095 Msa0175810:three_prime_UTR
ATGTCAATACCTCTTGTCCT+TGG 0.461640 1_4:-61932884 None:intergenic
CAGCCTAATGGCTATGATCA+TGG 0.464027 1_4:+61932050 Msa0175810:intron
TACCTCTTGTCCTTGGGAGT+TGG 0.464514 1_4:-61932877 None:intergenic
TTTCAACCCGCGAAGTGCTC+GGG 0.465175 1_4:-61927794 None:intergenic
TACCGCGAGTGAGCACTCTA+TGG 0.467059 1_4:+61929970 Msa0175810:CDS
CACGGTGTTTGGAGAACTAA+AGG 0.468439 1_4:+61927720 Msa0175810:CDS
ATCGAGATTCATACAACTCC+GGG 0.468527 1_4:+61935522 Msa0175810:CDS
GCTTGTTGCTGATCTGAATC+AGG 0.471188 1_4:-61929271 None:intergenic
GTATAGCATTTGCCGTCCTC+AGG 0.472135 1_4:-61936302 None:intergenic
ATTCATACAACTCCGGGGAT+TGG 0.472633 1_4:+61935528 Msa0175810:CDS
AGCTGTATCACTTTACTTGT+GGG 0.473509 1_4:+61927504 Msa0175810:CDS
TGCATCAATGGATCACATCC+AGG 0.473959 1_4:+61932103 Msa0175810:CDS
GATAATTCCTGACCTTATCA+AGG 0.480992 1_4:-61929750 None:intergenic
GAGGACGGCAAATGCTATAC+AGG 0.481199 1_4:+61936305 Msa0175810:CDS
GGGTATGAGGCAAATGCAAC+GGG 0.483297 1_4:-61934776 None:intergenic
CCAACGTTTAACAAAAGAAA+AGG 0.483690 1_4:+61931026 Msa0175810:CDS
ATCTTGCTGGAACACAAATT+GGG 0.485543 1_4:+61931282 Msa0175810:CDS
TACAGTCTCTATGGGGTATG+AGG 0.485942 1_4:-61934789 None:intergenic
GAAGAAAGAGAAGAAGAAAG+AGG 0.486025 1_4:-61925663 None:intergenic
TGTCAATACCTCTTGTCCTT+GGG 0.487085 1_4:-61932883 None:intergenic
TGTTGAAGAGGGTGGCCAAA+TGG 0.487491 1_4:-61931640 None:intergenic
TTCCAGGTTACTATCTAAGA+AGG 0.491500 1_4:+61929906 Msa0175810:CDS
AGTACAGGTGGTAGCGATGA+TGG 0.492346 1_4:+61934015 Msa0175810:CDS
TCCTCGATGATCTTGTACAC+TGG 0.494343 1_4:+61930005 Msa0175810:CDS
GGGTGTTGGTCTTCCTCCAC+AGG 0.494683 1_4:+61935788 Msa0175810:CDS
AGTGAAGGACGAGGGAATGA+TGG 0.494890 1_4:-61925579 None:intergenic
AGATTTCTTGATTGCAGGGA+AGG 0.495120 1_4:-61936849 None:intergenic
TGATGGAAGAAGATTGAGGT+TGG 0.496207 1_4:-61925562 None:intergenic
ATTCGTGATTCCGTGCTTGG+TGG 0.497022 1_4:+61931613 Msa0175810:CDS
ACCCCAGCAAATTGAAATGT+TGG 0.497846 1_4:-61928781 None:intergenic
GAAAGTGATTGTACCTGAAC+GGG 0.499135 1_4:-61936882 None:intergenic
TTTGAAAATTAAGCTGGAAG+AGG 0.499156 1_4:+61926408 Msa0175810:CDS
TTGAAGATTTCTTGATTGCA+GGG 0.499401 1_4:-61936853 None:intergenic
TATGACAAAGTTGTAAGTAC+AGG 0.499643 1_4:+61934000 Msa0175810:CDS
TCTTCTTAAATCCCAGTTGG+CGG 0.499715 1_4:+61927084 Msa0175810:CDS
ACTCCGGGGATTGGTTCAAC+AGG 0.500414 1_4:+61935537 Msa0175810:CDS
GAGATGCAGGATAAACCATT+TGG 0.500912 1_4:+61935169 Msa0175810:CDS
GGGTCGGAAGTATTAACATA+TGG 0.501335 1_4:+61934746 Msa0175810:CDS
ATCCTTTGAGGCCTGAAGGA+TGG 0.501907 1_4:-61936210 None:intergenic
AGAAATTGTCCATTGTAGCT+AGG 0.503045 1_4:-61936239 None:intergenic
TCAGTGTGGCTGAGAGATGC+AGG 0.503417 1_4:+61935156 Msa0175810:CDS
GAGAAGAAGAAAGAGGTGGT+GGG 0.504187 1_4:-61925656 None:intergenic
TACTGGCCTTCGTGTTGTGT+TGG 0.505611 1_4:+61929675 Msa0175810:CDS
GCTAATGATCCATATGCTAG+AGG 0.506432 1_4:+61927825 Msa0175810:CDS
TACATACAATTCCAATAACT+GGG 0.506875 1_4:+61935767 Msa0175810:CDS
TTCTCTTCTTAAATCCCAGT+TGG 0.507410 1_4:+61927081 Msa0175810:CDS
GCTCAGCTGATGAGAAATGC+AGG 0.508969 1_4:+61927398 Msa0175810:intron
AGAAGAAGAAAGAGGTGGTG+GGG 0.509162 1_4:-61925655 None:intergenic
AAGCATCTTTGCTGGAAAGT+AGG 0.511681 1_4:-61925914 None:intergenic
GAGAAATTTCCACACATTCG+AGG 0.514797 1_4:+61927019 Msa0175810:CDS
GCTAGGATGTCAATCCTTTG+AGG 0.514911 1_4:-61936222 None:intergenic
AAGGAGAACTGGAGAAATGT+TGG 0.516865 1_4:+61928814 Msa0175810:CDS
CCTCGATGATCTTGTACACT+GGG 0.517069 1_4:+61930006 Msa0175810:CDS
AAGCTGTATCACTTTACTTG+TGG 0.517453 1_4:+61927503 Msa0175810:CDS
TGAATGCTTTGTTTCGGGTG+TGG 0.517576 1_4:+61937101 Msa0175810:three_prime_UTR
AAGGATTACCATCAAAGTAA+AGG 0.517953 1_4:-61928543 None:intergenic
CATAGAAATTGTTCCTCTTG+AGG 0.518870 1_4:+61927692 Msa0175810:CDS
TCACAACACTGGACCATCGC+TGG 0.519979 1_4:+61936613 Msa0175810:CDS
ATGGTCATGATGGCTTTCCT+GGG 0.520278 1_4:+61936666 Msa0175810:CDS
GTAGTAGATAAATGGAGAGG+TGG 0.523775 1_4:+61933973 Msa0175810:CDS
CTAAAGAAATTATCAAGTGC+GGG 0.526067 1_4:+61928736 Msa0175810:CDS
TCATGTTTATTAGATTGGAA+TGG 0.526733 1_4:+61932827 Msa0175810:intron
GATTTCTTGATTGCAGGGAA+GGG 0.527032 1_4:-61936848 None:intergenic
ACCCATCCTTCAGGCCTCAA+AGG 0.528067 1_4:+61936208 Msa0175810:CDS
AGGACAGAATGTTCATCAAA+GGG 0.528465 1_4:-61929730 None:intergenic
GATTGAGGTTGGAAATTGAA+GGG 0.530581 1_4:-61925551 None:intergenic
TATGGTGAAGGATGGGACTT+TGG 0.531936 1_4:+61931215 Msa0175810:CDS
CTAACAAATGATATTTCTTG+TGG 0.533664 1_4:-61936825 None:intergenic
TTAGAGAAGAGTGGCAGCAA+TGG 0.535689 1_4:+61933948 Msa0175810:intron
GTCACAAAACCCTGTTGAAG+AGG 0.535691 1_4:-61931652 None:intergenic
GCAGACTTTCATCAGACGGC+AGG 0.535852 1_4:+61927974 Msa0175810:intron
AATTCCAATAACTGGGGTGT+TGG 0.536708 1_4:+61935774 Msa0175810:CDS
AAAACAGATATGGTGAAGGA+TGG 0.537753 1_4:+61931207 Msa0175810:intron
CTATGGGATCATCTCCTGAT+GGG 0.539056 1_4:-61927674 None:intergenic
GGAAGGTACAGTGAAGGACG+AGG 0.540346 1_4:-61925588 None:intergenic
GTCAATCCTTTGAGGCCTGA+AGG 0.542746 1_4:-61936214 None:intergenic
GATACTCCGCTCAAAATCAC+TGG 0.543487 1_4:+61935499 Msa0175810:CDS
TATACCACCCGAGCACTTCG+CGG 0.543517 1_4:+61927787 Msa0175810:CDS
AGATTGAGGTTGGAAATTGA+AGG 0.543706 1_4:-61925552 None:intergenic
AATACACTTACAGTCTCTAT+GGG 0.543898 1_4:-61934797 None:intergenic
TGGAAAGTAGTAGATGAAGA+AGG 0.545285 1_4:-61925609 None:intergenic
AGAAAATATACTTGAGCGGT+AGG 0.545851 1_4:-61927529 None:intergenic
TCTTCATTATATGACCCATA+AGG 0.548661 1_4:-61930489 None:intergenic
TTTCAGAATGAAACCAAGAC+TGG 0.549922 1_4:+61936182 Msa0175810:intron
AGCTATGCAAGTAATCCAAA+TGG 0.550803 1_4:+61929452 Msa0175810:CDS
TCTTACGAAACTCAATTGTA+CGG 0.551046 1_4:-61929481 None:intergenic
TCCATCAGGTTTCAACTCAT+CGG 0.551583 1_4:-61928022 None:intergenic
TAAGCTCACAATGTCAAAGA+GGG 0.552824 1_4:-61935013 None:intergenic
AAGGACAGAATGTTCATCAA+AGG 0.554747 1_4:-61929731 None:intergenic
GCCGTCCTCAGGCGGAAAAG+TGG 0.554849 1_4:-61936291 None:intergenic
AAGTAGTAGATGAAGAAGGA+AGG 0.555513 1_4:-61925605 None:intergenic
TCCGATGAGTTGAAACCTGA+TGG 0.558445 1_4:+61928021 Msa0175810:CDS
TCAAGAGGAACAATTTCTAT+GGG 0.559947 1_4:-61927690 None:intergenic
TCTATGGGATCATCTCCTGA+TGG 0.560305 1_4:-61927675 None:intergenic
TCTGTGCAGCCTGAATTTCG+CGG 0.561682 1_4:+61928509 Msa0175810:CDS
TCGGAAGTATTAACATATGG+TGG 0.569218 1_4:+61934749 Msa0175810:CDS
TGAAAGTGATTGTACCTGAA+CGG 0.570977 1_4:-61936883 None:intergenic
GAGAAATGCAGGGACTGTAC+TGG 0.571550 1_4:+61927409 Msa0175810:CDS
CTAATGATCCATATGCTAGA+GGG 0.572308 1_4:+61927826 Msa0175810:CDS
ATCCATTGATGCAGAAAGCA+TGG 0.572725 1_4:-61932093 None:intergenic
AAACAGATATGGTGAAGGAT+GGG 0.572848 1_4:+61931208 Msa0175810:intron
GATCGAGATTCATACAACTC+CGG 0.574564 1_4:+61935521 Msa0175810:CDS
TCTAAAGAAATTATCAAGTG+CGG 0.576534 1_4:+61928735 Msa0175810:CDS
ATACCTGTTGAACCAATCCC+CGG 0.577271 1_4:-61935540 None:intergenic
ATGAGTTGAAACCTGATGGA+TGG 0.577800 1_4:+61928025 Msa0175810:CDS
CAACCCGCGAAGTGCTCGGG+TGG 0.578847 1_4:-61927791 None:intergenic
ACACCGTGTTCCTCCTCAAG+AGG 0.582367 1_4:-61927705 None:intergenic
ACGGTGTTTGGAGAACTAAA+GGG 0.582788 1_4:+61927721 Msa0175810:CDS
GGGGTATGAGGCAAATGCAA+CGG 0.586241 1_4:-61934777 None:intergenic
AAATGGAGATCCACCAAGCA+CGG 0.587147 1_4:-61931623 None:intergenic
AGGCTGCACAGAGAGATCAT+TGG 0.587643 1_4:-61928498 None:intergenic
ATAAATAACAACCGCCAACT+GGG 0.590711 1_4:-61927095 None:intergenic
AAACTTTGATGGATATAACT+GGG 0.593002 1_4:+61929312 Msa0175810:CDS
CAGCTGTGTTCGTCGAGCCA+AGG 0.598123 1_4:+61937061 Msa0175810:CDS
TTTGGCCACCCTCTTCAACA+GGG 0.599209 1_4:+61931643 Msa0175810:CDS
GAAGAAGGAAGGTACAGTGA+AGG 0.600053 1_4:-61925594 None:intergenic
ATACCACCCGAGCACTTCGC+GGG 0.601456 1_4:+61927788 Msa0175810:CDS
AACCAACTCCCAAGGACAAG+AGG 0.601989 1_4:+61932875 Msa0175810:CDS
TAGCATTTGCCGTCCTCAGG+CGG 0.604532 1_4:-61936299 None:intergenic
CGAGTACGCTTTCACAACAC+TGG 0.604677 1_4:+61936602 Msa0175810:CDS
GACAAAGTTGTAAGTACAGG+TGG 0.605664 1_4:+61934003 Msa0175810:CDS
GCTTTGTAACCTCGAATGTG+TGG 0.606246 1_4:-61927028 None:intergenic
TTAAGCAGACTTTCATCAGA+CGG 0.607912 1_4:+61927970 Msa0175810:intron
GACTTTCATCAGACGGCAGG+CGG 0.608491 1_4:+61927977 Msa0175810:intron
TTAAGCTCACAATGTCAAAG+AGG 0.608541 1_4:-61935014 None:intergenic
GTTCCTCTTGAGGAGGAACA+CGG 0.610875 1_4:+61927702 Msa0175810:CDS
TTCCTTCTTAGATAGTAACC+TGG 0.611688 1_4:-61929908 None:intergenic
GAACTAATATCTGAACTGGA+AGG 0.614512 1_4:-61927061 None:intergenic
GGTGTATTACATTTGCAGGA+AGG 0.615206 1_4:-61926441 None:intergenic
GCAGTAGTAGATAAATGGAG+AGG 0.618283 1_4:+61933970 Msa0175810:CDS
AAGTGTTATAGCATTATCAC+AGG 0.618531 1_4:+61935196 Msa0175810:CDS
CGTTTAACAAAAGAAAAGGA+TGG 0.620727 1_4:+61931030 Msa0175810:CDS
ATAGTGATGAGCATTGAAGA+TGG 0.621334 1_4:+61936647 Msa0175810:CDS
AGCATTGAAGATGGTCATGA+TGG 0.623024 1_4:+61936656 Msa0175810:CDS
CTCAGCTGATGAGAAATGCA+GGG 0.623428 1_4:+61927399 Msa0175810:intron
TCACAAAACCCTGTTGAAGA+GGG 0.624283 1_4:-61931651 None:intergenic
GAAAGAGAAGAAGAAAGAGG+TGG 0.624466 1_4:-61925660 None:intergenic
TATTCACTTTCAGACTCCGT+CGG 0.625705 1_4:+61935130 Msa0175810:intron
CGGAAGTATTAACATATGGT+GGG 0.626066 1_4:+61934750 Msa0175810:CDS
AGAAATTGTTCCTCTTGAGG+AGG 0.628595 1_4:+61927695 Msa0175810:CDS
GCCAACATTTCAATTTGCTG+GGG 0.628938 1_4:+61928780 Msa0175810:CDS
TATCTAAGAAGGAACACAGA+TGG 0.629387 1_4:+61929917 Msa0175810:CDS
ACTGTCTACAATCATTTGCA+GGG 0.631190 1_4:+61929700 Msa0175810:CDS
TGAGTTGAAACCTGATGGAT+GGG 0.632039 1_4:+61928026 Msa0175810:CDS
GTTGAGGTGTTAGAGAAGAG+TGG 0.634631 1_4:+61933939 Msa0175810:intron
GATTGACATCCTAGCTACAA+TGG 0.635719 1_4:+61936230 Msa0175810:CDS
AACCATAGAGTGCTCACTCG+CGG 0.635769 1_4:-61929972 None:intergenic
AACTTTGATGGATATAACTG+GGG 0.637519 1_4:+61929313 Msa0175810:CDS
CAAAACCCTGTTGAAGAGGG+TGG 0.637841 1_4:-61931648 None:intergenic
TAGGGACACCCCAAAGAACA+GGG 0.638095 1_4:-61929424 None:intergenic
AAAAGCTCATCTAAAACACC+AGG 0.639357 1_4:-61927442 None:intergenic
AGGTACAACCCTGTTCTTTG+GGG 0.639374 1_4:+61929416 Msa0175810:intron
TTTGTACTAACCAACTCCCA+AGG 0.641013 1_4:+61932867 Msa0175810:CDS
AAGCTGGAAGAGGATAAGGC+TGG 0.643162 1_4:+61926418 Msa0175810:CDS
TGTTGATCATCATCAAAATG+GGG 0.643992 1_4:+61925884 Msa0175810:CDS
CACCATTCTGATAGATACGT+CGG 0.645570 1_4:+61929231 Msa0175810:intron
GGAAGTAGTTTGATCGACAG+AGG 0.652097 1_4:-61925688 None:intergenic
GGAATGATGGAAGAAGATTG+AGG 0.653567 1_4:-61925566 None:intergenic
TGTTGCTGATCTGAATCAGG+TGG 0.655693 1_4:-61929268 None:intergenic
GTGCAGCCTGAATTTCGCGG+TGG 0.661169 1_4:+61928512 Msa0175810:CDS
TCAGCCACACTGATATCCGA+CGG 0.662189 1_4:-61935146 None:intergenic
GAATGCGAAGTGAAGTAGTG+TGG 0.667419 1_4:-61925629 None:intergenic
TGGAAGAAAATATACTTGAG+CGG 0.673604 1_4:-61927533 None:intergenic
TTGCTGGAACACAAATTGGG+AGG 0.682244 1_4:+61931285 Msa0175810:CDS
GGATCCAGCTGAGACAACCC+AGG 0.682593 1_4:-61936683 None:intergenic
ACATACAATTCCAATAACTG+GGG 0.685335 1_4:+61935768 Msa0175810:CDS
GAAGGTACAGTGAAGGACGA+GGG 0.701785 1_4:-61925587 None:intergenic
TCATATAATGAAGAGTACAA+TGG 0.703829 1_4:+61930498 Msa0175810:CDS
ACTTTGATGGATATAACTGG+GGG 0.707527 1_4:+61929314 Msa0175810:CDS
TCTGAGAAAAGTGCACCGAG+TGG 0.708335 1_4:-61927478 None:intergenic
ACAGGTGGTAGCGATGATGG+CGG 0.714411 1_4:+61934018 Msa0175810:CDS
GACTCCGTCGGATATCAGTG+TGG 0.715396 1_4:+61935142 Msa0175810:intron
TGTTGGCAATAGATGGACAT+GGG 0.721283 1_4:-61928764 None:intergenic
ATGTTGGCAATAGATGGACA+TGG 0.721857 1_4:-61928765 None:intergenic
ATGACTCCAGAAACCAGCGA+TGG 0.732163 1_4:-61936626 None:intergenic
ATACACTTACAGTCTCTATG+GGG 0.740403 1_4:-61934796 None:intergenic
CAGTATCCAACACAACACGA+AGG 0.750779 1_4:-61929681 None:intergenic
TCGAGATTCATACAACTCCG+GGG 0.753701 1_4:+61935523 Msa0175810:CDS
CCCAGTGTACAAGATCATCG+AGG 0.774079 1_4:-61930006 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATCCTTTTTTTTAAT+TGG + chr1_4:61925761-61925780 Msa0175810:intron 10.0%
!! AAACTCTATAAAATTATATT+TGG - chr1_4:61926293-61926312 None:intergenic 10.0%
!!! ATTGGTAATATAAATTTAAA+AGG + chr1_4:61929005-61929024 Msa0175810:intron 10.0%
!! ATATAAATTTAAAAGGTTAA+AGG + chr1_4:61929012-61929031 Msa0175810:intron 10.0%
!! TATAAATTTAAAAGGTTAAA+GGG + chr1_4:61929013-61929032 Msa0175810:intron 10.0%
!!! ATATTTTTTAGAAAATTGAA+GGG - chr1_4:61930390-61930409 None:intergenic 10.0%
!!! AATATTATTTCTTAATTACT+AGG - chr1_4:61933007-61933026 None:intergenic 10.0%
!!! ATATTTTATAATAGCAATTA+TGG - chr1_4:61933413-61933432 None:intergenic 10.0%
!!! TTTTTTTTTTCATGATATTT+TGG + chr1_4:61934573-61934592 Msa0175810:intron 10.0%
!! TAAAATCATAATAAGTTATT+TGG - chr1_4:61934716-61934735 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTATGACT+AGG + chr1_4:61936732-61936751 Msa0175810:intron 10.0%
!! TGTAATTATTACATTATTAT+CGG - chr1_4:61937135-61937154 None:intergenic 10.0%
!!! ATTTTTATTCATAAATGCAA+AGG - chr1_4:61925748-61925767 None:intergenic 15.0%
!! AGAAATTCCAATTAAAAAAA+AGG - chr1_4:61925771-61925790 None:intergenic 15.0%
!!! TTAGTTGATTTTAATAGTTT+AGG - chr1_4:61926591-61926610 None:intergenic 15.0%
!! AACTATTAAAATCAACTAAA+AGG + chr1_4:61926592-61926611 Msa0175810:intron 15.0%
!! AACTATTAAAATTGACTAAA+AGG - chr1_4:61926872-61926891 None:intergenic 15.0%
!! GAAGTATATTTAAAAGTTAT+AGG + chr1_4:61927152-61927171 Msa0175810:intron 15.0%
!! TCTAGATTATAGAAATAATT+TGG - chr1_4:61927881-61927900 None:intergenic 15.0%
!! GCTTAATTCAATAAAAAAAA+AGG - chr1_4:61927956-61927975 None:intergenic 15.0%
!!! TAATTTTATCATAGTTATCT+TGG + chr1_4:61928145-61928164 Msa0175810:intron 15.0%
!! ATTCAAACAATAAGATAATA+AGG - chr1_4:61928673-61928692 None:intergenic 15.0%
!! CTCATTTGAAAATTAAAAAT+TGG + chr1_4:61928987-61929006 Msa0175810:intron 15.0%
!!! CATATTTTTTAGAAAATTGA+AGG - chr1_4:61930391-61930410 None:intergenic 15.0%
!! TATAAAAAAAATGCAAGATA+TGG + chr1_4:61930572-61930591 Msa0175810:intron 15.0%
!!! TTTTGTATTGTCAAAAAAAA+AGG + chr1_4:61930942-61930961 Msa0175810:intron 15.0%
!! AAAATAAAGAAATTAATACG+AGG - chr1_4:61931176-61931195 None:intergenic 15.0%
!! ATTTAATTGAAAAACAGATA+TGG + chr1_4:61931197-61931216 Msa0175810:intron 15.0%
!!! ATCTTTCAAGTTTAAAATAT+TGG + chr1_4:61932151-61932170 Msa0175810:intron 15.0%
!!! ATAAATTTCCAAGAAAATTT+TGG + chr1_4:61933238-61933257 Msa0175810:intron 15.0%
!! AAAATTAGAAATGGTTATTT+GGG - chr1_4:61933304-61933323 None:intergenic 15.0%
!! AGTATTATAACAACATATAT+TGG + chr1_4:61934268-61934287 Msa0175810:intron 15.0%
!! GTATTATAACAACATATATT+GGG + chr1_4:61934269-61934288 Msa0175810:intron 15.0%
!!! TAACTTATTATGATTTTATC+AGG + chr1_4:61934718-61934737 Msa0175810:intron 15.0%
!! ATAAAAACTTATTATCTGTT+GGG + chr1_4:61936066-61936085 Msa0175810:intron 15.0%
!!! AACTTTTGTTTTAAACATGA+TGG + chr1_4:61925791-61925810 Msa0175810:intron 20.0%
!! ATTTCTAATTCTCAAATTCA+AGG + chr1_4:61925945-61925964 Msa0175810:CDS 20.0%
!!! TATTTAAGGTATTAAACCAT+GGG - chr1_4:61926633-61926652 None:intergenic 20.0%
!!! TTATTTAAGGTATTAAACCA+TGG - chr1_4:61926634-61926653 None:intergenic 20.0%
!!! AATCTGTGTTTTTTTTTACA+GGG - chr1_4:61926689-61926708 None:intergenic 20.0%
!!! AAATCTGTGTTTTTTTTTAC+AGG - chr1_4:61926690-61926709 None:intergenic 20.0%
!! TTATTTATGATTGTAAGTAC+TGG + chr1_4:61927110-61927129 Msa0175810:intron 20.0%
!!! CACTATATTTGATGATATTT+GGG + chr1_4:61927285-61927304 Msa0175810:intron 20.0%
!! GAAATAACATAAAATTCCTA+TGG + chr1_4:61927558-61927577 Msa0175810:intron 20.0%
!! TCTATCTTAATATGAAGATA+AGG - chr1_4:61927597-61927616 None:intergenic 20.0%
!!! ATCTTTGCACATTATTTTTT+GGG + chr1_4:61927616-61927635 Msa0175810:intron 20.0%
!! CATTTATGAATTGCATATAA+GGG + chr1_4:61928098-61928117 Msa0175810:CDS 20.0%
!!! TATTTTAATTTTAGTGCTCA+AGG - chr1_4:61928195-61928214 None:intergenic 20.0%
!!! ATTAACTACTCTAAAGATTA+TGG - chr1_4:61928354-61928373 None:intergenic 20.0%
!! ATGAGTTAATTAAAAACACT+GGG - chr1_4:61928972-61928991 None:intergenic 20.0%
!! AATGAGTTAATTAAAAACAC+TGG - chr1_4:61928973-61928992 None:intergenic 20.0%
!! TTTATGTTCTCATCTTAAAA+AGG + chr1_4:61929396-61929415 Msa0175810:intron 20.0%
!!! TTGTAGTTAATTTTGTTATG+TGG + chr1_4:61929563-61929582 Msa0175810:intron 20.0%
!! CAAAATCATATATATCAAAG+AGG - chr1_4:61930119-61930138 None:intergenic 20.0%
!! GATGAATGAAAATCAATTTA+TGG - chr1_4:61930424-61930443 None:intergenic 20.0%
!!! TTTTTTTCTTTTCAGATTGA+TGG + chr1_4:61930454-61930473 Msa0175810:intron 20.0%
!!! TTTTTTCTTTTCAGATTGAT+GGG + chr1_4:61930455-61930474 Msa0175810:intron 20.0%
!!! TATTTTTCCATGTTAATTTG+TGG - chr1_4:61931954-61931973 None:intergenic 20.0%
!! AAATAGTTAGCATTAAGAAT+GGG + chr1_4:61932338-61932357 Msa0175810:intron 20.0%
!! TAGATAATCGATAAAATTTG+TGG - chr1_4:61932562-61932581 None:intergenic 20.0%
!! TTCTTTCATGTTTATTAGAT+TGG + chr1_4:61932822-61932841 Msa0175810:intron 20.0%
!! GAAAATTAGAAATGGTTATT+TGG - chr1_4:61933305-61933324 None:intergenic 20.0%
!!! TTACTTCTGAAAATTAGAAA+TGG - chr1_4:61933313-61933332 None:intergenic 20.0%
!! TATGTATTGTGTGAATAAAA+GGG - chr1_4:61933356-61933375 None:intergenic 20.0%
!! TTATGTATTGTGTGAATAAA+AGG - chr1_4:61933357-61933376 None:intergenic 20.0%
!! TAAAAAAAGGAAGGAATAAA+TGG - chr1_4:61934428-61934447 None:intergenic 20.0%
!!! TTTTCATTATTGTGCATATT+AGG - chr1_4:61934664-61934683 None:intergenic 20.0%
!! ATGCACAATAATGAAAATAT+TGG + chr1_4:61934667-61934686 Msa0175810:intron 20.0%
!! AATATAGAGAATTATAGAAG+TGG - chr1_4:61934851-61934870 None:intergenic 20.0%
!! TATTTATACTGATCTTATGT+TGG + chr1_4:61935261-61935280 Msa0175810:intron 20.0%
!! TATCATCTGTATCATTATAA+TGG + chr1_4:61935633-61935652 Msa0175810:intron 20.0%
!! GATAAAAACTTATTATCTGT+TGG + chr1_4:61936065-61936084 Msa0175810:intron 20.0%
!!! AGCTTTAATATTTTGATTTC+TGG + chr1_4:61936564-61936583 Msa0175810:intron 20.0%
!! TCTACTTATAATTTCAAATG+AGG + chr1_4:61936927-61936946 Msa0175810:intron 20.0%
! AATGTTGATCATCATCAAAA+TGG + chr1_4:61925882-61925901 Msa0175810:CDS 25.0%
! ATGTTGATCATCATCAAAAT+GGG + chr1_4:61925883-61925902 Msa0175810:CDS 25.0%
! TCTTTCTATTTGTAACTGAT+AGG + chr1_4:61926379-61926398 Msa0175810:intron 25.0%
! TAATAGTTTAGGAACCAAAT+TGG - chr1_4:61926580-61926599 None:intergenic 25.0%
!! AACCATGGGAATATATTTTA+GGG - chr1_4:61926619-61926638 None:intergenic 25.0%
!! AAACCATGGGAATATATTTT+AGG - chr1_4:61926620-61926639 None:intergenic 25.0%
! TTAAATAACCCCTATAAGTT+GGG + chr1_4:61926646-61926665 Msa0175810:intron 25.0%
!!! ATCTGTGTTTTTTTTTACAG+GGG - chr1_4:61926688-61926707 None:intergenic 25.0%
! ATGAAGAATCCAAAATTACA+GGG - chr1_4:61926715-61926734 None:intergenic 25.0%
! TATGAAGAATCCAAAATTAC+AGG - chr1_4:61926716-61926735 None:intergenic 25.0%
! TAATAGTTTAGTGACCAAAT+TGG + chr1_4:61926884-61926903 Msa0175810:intron 25.0%
!! TATTCTTCTTTTTGACAATG+TGG + chr1_4:61926938-61926957 Msa0175810:intron 25.0%
!! GCACTATATTTGATGATATT+TGG + chr1_4:61927284-61927303 Msa0175810:intron 25.0%
! ATTGTATTCTTGTGTAAATG+TGG + chr1_4:61927316-61927335 Msa0175810:intron 25.0%
! TTGTATTCTTGTGTAAATGT+GGG + chr1_4:61927317-61927336 Msa0175810:intron 25.0%
!!! GATGAGCTTTTTTCATATAA+TGG + chr1_4:61927454-61927473 Msa0175810:CDS 25.0%
!!! GGAATTTTATGTTATTTCAG+TGG - chr1_4:61927556-61927575 None:intergenic 25.0%
!!! GATCTTTGCACATTATTTTT+TGG + chr1_4:61927615-61927634 Msa0175810:intron 25.0%
!! AATTTGGAATAGACAATTGA+AGG - chr1_4:61927865-61927884 None:intergenic 25.0%
! GTTAAAACAACAAATCATTC+AGG - chr1_4:61927934-61927953 None:intergenic 25.0%
! TCTGAGAAAGAATGTAAAAT+GGG - chr1_4:61928072-61928091 None:intergenic 25.0%
! ATCTGAGAAAGAATGTAAAA+TGG - chr1_4:61928073-61928092 None:intergenic 25.0%
! GCATTTATGAATTGCATATA+AGG + chr1_4:61928097-61928116 Msa0175810:CDS 25.0%
! AATTTAAGCCTAAAGATATC+TGG - chr1_4:61928291-61928310 None:intergenic 25.0%
!! ACTCTAAAGATTATGGAAAT+TGG - chr1_4:61928347-61928366 None:intergenic 25.0%
!!! TTGTTTTTAGAAGTATCACT+TGG + chr1_4:61928390-61928409 Msa0175810:intron 25.0%
!!! TGTTTTTAGAAGTATCACTT+GGG + chr1_4:61928391-61928410 Msa0175810:intron 25.0%
! TTTAGAAAGACTAAGATGTA+AGG - chr1_4:61928565-61928584 None:intergenic 25.0%
! CCATATCTATTCATAAAAGA+TGG - chr1_4:61928622-61928641 None:intergenic 25.0%
!! CCATCTTTTATGAATAGATA+TGG + chr1_4:61928619-61928638 Msa0175810:intron 25.0%
!!! TACTACATGCATATTTTTGA+AGG + chr1_4:61928693-61928712 Msa0175810:intron 25.0%
! TCTAAAGAAATTATCAAGTG+CGG + chr1_4:61928735-61928754 Msa0175810:CDS 25.0%
! TGAAGTCAGATATATACAAA+AGG - chr1_4:61929213-61929232 None:intergenic 25.0%
!! AGTTATATCCATCAAAGTTT+TGG - chr1_4:61929312-61929331 None:intergenic 25.0%
!! AAAACTTTGATGGATATAAC+TGG + chr1_4:61929311-61929330 Msa0175810:CDS 25.0%
!! AAACTTTGATGGATATAACT+GGG + chr1_4:61929312-61929331 Msa0175810:CDS 25.0%
! TAAGTTTATAATACCAGTGA+TGG + chr1_4:61929337-61929356 Msa0175810:intron 25.0%
! ACAATTCAAACACTCATATA+TGG + chr1_4:61929360-61929379 Msa0175810:intron 25.0%
! TATCGATGAATTTAACATCA+GGG - chr1_4:61929537-61929556 None:intergenic 25.0%
! ATATCGATGAATTTAACATC+AGG - chr1_4:61929538-61929557 None:intergenic 25.0%
! ATTTAACCAACAATAGACAA+TGG - chr1_4:61929599-61929618 None:intergenic 25.0%
!! ATAATGGAGAAATACTCAAT+AGG - chr1_4:61929836-61929855 None:intergenic 25.0%
! TAGATAGGCTAACAAAATAA+TGG - chr1_4:61929852-61929871 None:intergenic 25.0%
! AAATCAATGATGTACCATTT+AGG - chr1_4:61930181-61930200 None:intergenic 25.0%
!! TATAAGTTATCCTGATTTGA+AGG + chr1_4:61930335-61930354 Msa0175810:intron 25.0%
! GATAAAAAATCCTTCAAATC+AGG - chr1_4:61930348-61930367 None:intergenic 25.0%
!! TTGAAGGGAAAGTATAATTA+AGG - chr1_4:61930375-61930394 None:intergenic 25.0%
!!! TGCTTTAATGTTATTTCACT+CGG + chr1_4:61930623-61930642 Msa0175810:intron 25.0%
! AATCTGACATCATAAATCAA+TGG + chr1_4:61930737-61930756 Msa0175810:intron 25.0%
! AAATAAATGAATGCATGACA+AGG + chr1_4:61930806-61930825 Msa0175810:intron 25.0%
!!! TCTGGTTTAAATGTTCTTTT+TGG + chr1_4:61931388-61931407 Msa0175810:intron 25.0%
! TGACATGAATAATTATCAGT+AGG - chr1_4:61931812-61931831 None:intergenic 25.0%
!! TGTCACAGATTGTATATTTT+TGG + chr1_4:61931827-61931846 Msa0175810:intron 25.0%
! TTCATTGTAAAGTGGAAAAT+GGG - chr1_4:61931890-61931909 None:intergenic 25.0%
!! AAACTTGATATTTTCATGGT+TGG + chr1_4:61932216-61932235 Msa0175810:intron 25.0%
! CATTCTTAATGCTAACTATT+TGG - chr1_4:61932339-61932358 None:intergenic 25.0%
! CAAATAGTTAGCATTAAGAA+TGG + chr1_4:61932337-61932356 Msa0175810:intron 25.0%
! AATAGTTAGCATTAAGAATG+GGG + chr1_4:61932339-61932358 Msa0175810:intron 25.0%
!! AAATTCTCTGTGCAAAATTT+TGG + chr1_4:61932374-61932393 Msa0175810:intron 25.0%
! CTTATATGTACCAAATTGAT+CGG - chr1_4:61932793-61932812 None:intergenic 25.0%
! TCATGTTTATTAGATTGGAA+TGG + chr1_4:61932827-61932846 Msa0175810:intron 25.0%
! TTATTCAAATGAAACAGACA+TGG - chr1_4:61932975-61932994 None:intergenic 25.0%
!!! ATCTAGTGTTTTCTTGTTTT+AGG + chr1_4:61933060-61933079 Msa0175810:intron 25.0%
!!! CTGCTAAAAATTTAGGTTTT+CGG - chr1_4:61933763-61933782 None:intergenic 25.0%
!!! GAAAACCTAAATTTTTAGCA+GGG + chr1_4:61933762-61933781 Msa0175810:intron 25.0%
! TATAACAACATATATTGGGT+TGG + chr1_4:61934273-61934292 Msa0175810:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr1_4:61934328-61934347 None:intergenic 25.0%
!! CTAGCTGTAAATTTTCTTTT+AGG - chr1_4:61934492-61934511 None:intergenic 25.0%
! CTAAAAGAAAATTTACAGCT+AGG + chr1_4:61934490-61934509 Msa0175810:intron 25.0%
! TGATAATATATCTTTAGTCC+TGG - chr1_4:61934525-61934544 None:intergenic 25.0%
! ATATTATCATACATGCTCTA+TGG + chr1_4:61934536-61934555 Msa0175810:intron 25.0%
!! TTATGATTTTATCAGGTGAA+AGG + chr1_4:61934725-61934744 Msa0175810:intron 25.0%
!! TATGATTTTATCAGGTGAAA+GGG + chr1_4:61934726-61934745 Msa0175810:intron 25.0%
! AATTATAGAAGTGGAAAAGT+GGG - chr1_4:61934842-61934861 None:intergenic 25.0%
!!! CTTTAGTTGTTTACTTTTTC+AGG + chr1_4:61934960-61934979 Msa0175810:intron 25.0%
! AGCTTAAAGGTAATTTGATA+TGG + chr1_4:61935030-61935049 Msa0175810:intron 25.0%
!!! ACATGCAGTTTATTTTTTTC+TGG + chr1_4:61935079-61935098 Msa0175810:intron 25.0%
!!! CATGCAGTTTATTTTTTTCT+GGG + chr1_4:61935080-61935099 Msa0175810:intron 25.0%
! ACTAAAGAATTTCTGTTCTT+AGG + chr1_4:61935448-61935467 Msa0175810:intron 25.0%
! CTAAAGAATTTCTGTTCTTA+GGG + chr1_4:61935449-61935468 Msa0175810:intron 25.0%
!!! GATACAGATGATATTAGTTT+TGG - chr1_4:61935626-61935645 None:intergenic 25.0%
! TTACATACAATTCCAATAAC+TGG + chr1_4:61935766-61935785 Msa0175810:CDS 25.0%
! TACATACAATTCCAATAACT+GGG + chr1_4:61935767-61935786 Msa0175810:CDS 25.0%
!! GTTTTTATCAATGTAATGCT+GGG - chr1_4:61936054-61936073 None:intergenic 25.0%
!! AGTTTTTATCAATGTAATGC+TGG - chr1_4:61936055-61936074 None:intergenic 25.0%
!! GTTTCATTCTGAAAAGTTAA+AGG - chr1_4:61936176-61936195 None:intergenic 25.0%
!!! CAGTATGTTTTAACATACAT+GGG - chr1_4:61936707-61936726 None:intergenic 25.0%
! CTAACAAATGATATTTCTTG+TGG - chr1_4:61936828-61936847 None:intergenic 25.0%
! TGTTAAGAGTTCAAAATATG+AGG + chr1_4:61937002-61937021 Msa0175810:CDS 25.0%
GTTTGAATAAACCTGAGAAA+TGG - chr1_4:61925712-61925731 None:intergenic 30.0%
TAACAAATTATCCTGCATCT+GGG - chr1_4:61925817-61925836 None:intergenic 30.0%
ATAACAAATTATCCTGCATC+TGG - chr1_4:61925818-61925837 None:intergenic 30.0%
TATTGTACTCAAGAGCTTAT+TGG + chr1_4:61925835-61925854 Msa0175810:CDS 30.0%
ATTGTACTCAAGAGCTTATT+GGG + chr1_4:61925836-61925855 Msa0175810:CDS 30.0%
TGTTGATCATCATCAAAATG+GGG + chr1_4:61925884-61925903 Msa0175810:CDS 30.0%
!! GATTTTGAGTGAATTGATTC+AGG + chr1_4:61926099-61926118 Msa0175810:intron 30.0%
!! ACATTTGAAAAGCACTTCTA+AGG + chr1_4:61926325-61926344 Msa0175810:intron 30.0%
AGAAAGAGTCAATGAACATT+TGG - chr1_4:61926366-61926385 None:intergenic 30.0%
TGAGGATTTGAAAATTAAGC+TGG + chr1_4:61926402-61926421 Msa0175810:CDS 30.0%
TTTGAAAATTAAGCTGGAAG+AGG + chr1_4:61926408-61926427 Msa0175810:CDS 30.0%
ACAACGATACAGACTAAAAA+GGG - chr1_4:61926465-61926484 None:intergenic 30.0%
AACAACGATACAGACTAAAA+AGG - chr1_4:61926466-61926485 None:intergenic 30.0%
!! AAATACCTCTGATTGCTTTT+AGG + chr1_4:61926514-61926533 Msa0175810:intron 30.0%
CAACTTATAGGGGTTATTTA+AGG - chr1_4:61926647-61926666 None:intergenic 30.0%
CTTAAATAACCCCTATAAGT+TGG + chr1_4:61926645-61926664 Msa0175810:intron 30.0%
TCAAATAGTCCCTGTAATTT+GGG - chr1_4:61926761-61926780 None:intergenic 30.0%
TATTCTCCTATCCATCAATT+TGG - chr1_4:61926840-61926859 None:intergenic 30.0%
ATGGATAGGAGAATAGTATA+AGG + chr1_4:61926845-61926864 Msa0175810:intron 30.0%
CTATCATTGTTTCACCAATT+TGG - chr1_4:61926901-61926920 None:intergenic 30.0%
TGGTGAAACAATGATAGTTT+AGG + chr1_4:61926904-61926923 Msa0175810:intron 30.0%
GGTGAAACAATGATAGTTTA+GGG + chr1_4:61926905-61926924 Msa0175810:intron 30.0%
TCTGCAAACTTTGTGTTTAT+AGG + chr1_4:61926991-61927010 Msa0175810:intron 30.0%
AAGAGAACTAATATCTGAAC+TGG - chr1_4:61927068-61927087 None:intergenic 30.0%
GGATAGCATATATTTGTGTT+CGG + chr1_4:61927173-61927192 Msa0175810:intron 30.0%
TGTAGAATGAAAACTCTATG+TGG + chr1_4:61927251-61927270 Msa0175810:intron 30.0%
AGTAGAAACTAATGACTACA+AGG - chr1_4:61927354-61927373 None:intergenic 30.0%
! TTTTCATATAATGGTCCACT+CGG + chr1_4:61927463-61927482 Msa0175810:CDS 30.0%
TGGAAGAAAATATACTTGAG+CGG - chr1_4:61927536-61927555 None:intergenic 30.0%
!!! ATTTTTTGGGTGAAAACAGT+CGG + chr1_4:61927629-61927648 Msa0175810:intron 30.0%
TCAAGAGGAACAATTTCTAT+GGG - chr1_4:61927693-61927712 None:intergenic 30.0%
AACTAAAGGGCCAAAAAATT+GGG + chr1_4:61927734-61927753 Msa0175810:CDS 30.0%
!!! TAACAACTCTCCCAATTTTT+TGG - chr1_4:61927747-61927766 None:intergenic 30.0%
AATTGCATATAAGGGATTTC+AGG + chr1_4:61928106-61928125 Msa0175810:CDS 30.0%
TTATCTTGCCTTTACTTTGA+TGG + chr1_4:61928535-61928554 Msa0175810:CDS 30.0%
AAGGATTACCATCAAAGTAA+AGG - chr1_4:61928546-61928565 None:intergenic 30.0%
!! ATATTTTTGAAGGATTCAGC+AGG + chr1_4:61928703-61928722 Msa0175810:intron 30.0%
CTAAAGAAATTATCAAGTGC+GGG + chr1_4:61928736-61928755 Msa0175810:CDS 30.0%
ATTGAAATGTTGGCAATAGA+TGG - chr1_4:61928774-61928793 None:intergenic 30.0%
TTGAATACCTATGTCTATGT+AGG + chr1_4:61929128-61929147 Msa0175810:intron 30.0%
AGGATGGAACAAATGTTAAA+TGG - chr1_4:61929166-61929185 None:intergenic 30.0%
ATAAAAAGCTGCAAGATAGA+AGG - chr1_4:61929186-61929205 None:intergenic 30.0%
!!! ATATCCATCAAAGTTTTGGA+TGG - chr1_4:61929308-61929327 None:intergenic 30.0%
! AACTTTGATGGATATAACTG+GGG + chr1_4:61929313-61929332 Msa0175810:CDS 30.0%
TCTTACGAAACTCAATTGTA+CGG - chr1_4:61929484-61929503 None:intergenic 30.0%
TACAATTGAGTTTCGTAAGA+TGG + chr1_4:61929484-61929503 Msa0175810:CDS 30.0%
GTAATTCCATTGTCTATTGT+TGG + chr1_4:61929590-61929609 Msa0175810:intron 30.0%
TGTACATAAATTCCAAGAGA+CGG - chr1_4:61929638-61929657 None:intergenic 30.0%
TTGGAATTTATGTACATTGC+AGG + chr1_4:61929642-61929661 Msa0175810:intron 30.0%
TGTATCTTATAGATTGTTCC+AGG + chr1_4:61929890-61929909 Msa0175810:intron 30.0%
!!! ACTTGCTGTTTTTCTGTTAA+TGG + chr1_4:61930141-61930160 Msa0175810:intron 30.0%
!! CTGTTTTTCTGTTAATGGAA+TGG + chr1_4:61930146-61930165 Msa0175810:intron 30.0%
AATGGACCTAAATTCCTAAA+TGG + chr1_4:61930164-61930183 Msa0175810:intron 30.0%
GATGTACCATTTAGGAATTT+AGG - chr1_4:61930173-61930192 None:intergenic 30.0%
TCCAATAAAGATTTCATGAG+CGG - chr1_4:61930248-61930267 None:intergenic 30.0%
GTATGTAATGTAACTCACTT+TGG + chr1_4:61930520-61930539 Msa0175810:intron 30.0%
!! AATGTTATTTCACTCGGTTA+TGG + chr1_4:61930629-61930648 Msa0175810:intron 30.0%
!! ATGTTATTTCACTCGGTTAT+GGG + chr1_4:61930630-61930649 Msa0175810:intron 30.0%
TCTTAAATGAATGTGTGACA+AGG + chr1_4:61930778-61930797 Msa0175810:intron 30.0%
ATCAAAGAATCAATACAAGC+AGG - chr1_4:61930903-61930922 None:intergenic 30.0%
TGAAATATGATTTCGTGACA+TGG + chr1_4:61930977-61930996 Msa0175810:intron 30.0%
! CCTTTTCTTTTGTTAAACGT+TGG - chr1_4:61931029-61931048 None:intergenic 30.0%
CCAACGTTTAACAAAAGAAA+AGG + chr1_4:61931026-61931045 Msa0175810:CDS 30.0%
CGTTTAACAAAAGAAAAGGA+TGG + chr1_4:61931030-61931049 Msa0175810:CDS 30.0%
TTGAAAAACAGATATGGTGA+AGG + chr1_4:61931203-61931222 Msa0175810:intron 30.0%
AATGATTATTAAGCAGCATG+TGG - chr1_4:61931330-61931349 None:intergenic 30.0%
CATATCAGTTGAACTTACAT+CGG - chr1_4:61931463-61931482 None:intergenic 30.0%
ATCAGAAGTTTAAGTAACGA+TGG - chr1_4:61931515-61931534 None:intergenic 30.0%
!! TTATTGTTGATTTGTCTTGC+TGG + chr1_4:61931563-61931582 Msa0175810:intron 30.0%
ATTATCAAGAAGCTTGAGAA+GGG - chr1_4:61931740-61931759 None:intergenic 30.0%
TATTATCAAGAAGCTTGAGA+AGG - chr1_4:61931741-61931760 None:intergenic 30.0%
TGGATACAGAAAACATCTAA+GGG - chr1_4:61931854-61931873 None:intergenic 30.0%
ATGGATACAGAAAACATCTA+AGG - chr1_4:61931855-61931874 None:intergenic 30.0%
GTTCATTGTAAAGTGGAAAA+TGG - chr1_4:61931891-61931910 None:intergenic 30.0%
CAATGATGTTCATTGTAAAG+TGG - chr1_4:61931898-61931917 None:intergenic 30.0%
CACTTTACAATGAACATCAT+TGG + chr1_4:61931896-61931915 Msa0175810:intron 30.0%
TCACATTAGAATTCTACTAG+TGG - chr1_4:61931924-61931943 None:intergenic 30.0%
TTTGTTGCCACAAATTAACA+TGG + chr1_4:61931944-61931963 Msa0175810:intron 30.0%
AATTTCATAAAGCCAAAACC+TGG - chr1_4:61932124-61932143 None:intergenic 30.0%
! TGGCAAACTTGATATTTTCA+TGG + chr1_4:61932212-61932231 Msa0175810:intron 30.0%
CTGAAACAGACAAATAAGAA+AGG - chr1_4:61932283-61932302 None:intergenic 30.0%
ATAGTTAGCATTAAGAATGG+GGG + chr1_4:61932340-61932359 Msa0175810:intron 30.0%
TATCACTATTCCGATCAATT+TGG + chr1_4:61932780-61932799 Msa0175810:intron 30.0%
!! TTGTTTTATTCTGCTGAGAA+TGG + chr1_4:61933132-61933151 Msa0175810:intron 30.0%
TTAGAAATGGTTATTTGGGA+GGG - chr1_4:61933300-61933319 None:intergenic 30.0%
ATTAGAAATGGTTATTTGGG+AGG - chr1_4:61933301-61933320 None:intergenic 30.0%
!!! CGAAAACCTAAATTTTTAGC+AGG + chr1_4:61933761-61933780 Msa0175810:intron 30.0%
CTAATCCCTGCTAAAAATTT+AGG - chr1_4:61933770-61933789 None:intergenic 30.0%
GCTTATCCTAAATCTGTTAT+TGG + chr1_4:61933791-61933810 Msa0175810:intron 30.0%
TATAGAGTGTGGTGAAATAT+GGG - chr1_4:61933821-61933840 None:intergenic 30.0%
ATATAGAGTGTGGTGAAATA+TGG - chr1_4:61933822-61933841 None:intergenic 30.0%
AATACTTCCATAGACAAATC+TGG - chr1_4:61933902-61933921 None:intergenic 30.0%
!! TTTGTCTATGGAAGTATTGA+CGG + chr1_4:61933904-61933923 Msa0175810:intron 30.0%
TATGACAAAGTTGTAAGTAC+AGG + chr1_4:61934000-61934019 Msa0175810:CDS 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr1_4:61934325-61934344 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr1_4:61934331-61934350 None:intergenic 30.0%
!!! TTTTTTAGTTCCCCCAAATT+AGG + chr1_4:61934337-61934356 Msa0175810:intron 30.0%
!!! TTTTTAGTTCCCCCAAATTA+GGG + chr1_4:61934338-61934357 Msa0175810:intron 30.0%
ATACAAAATCCCCCTAATTT+GGG - chr1_4:61934352-61934371 None:intergenic 30.0%
AATACAAAATCCCCCTAATT+TGG - chr1_4:61934353-61934372 None:intergenic 30.0%
GAAGGAATAAATGGAAAGAA+TGG - chr1_4:61934419-61934438 None:intergenic 30.0%
! TTTTCTTTTAGGCTCTGTTT+GGG - chr1_4:61934481-61934500 None:intergenic 30.0%
! ATTTTCTTTTAGGCTCTGTT+TGG - chr1_4:61934482-61934501 None:intergenic 30.0%
AAATTTACAGCTAGGAAGTT+TGG + chr1_4:61934498-61934517 Msa0175810:intron 30.0%
AATACACTTACAGTCTCTAT+GGG - chr1_4:61934800-61934819 None:intergenic 30.0%
ATTATAGAAGTGGAAAAGTG+GGG - chr1_4:61934841-61934860 None:intergenic 30.0%
GAATTATAGAAGTGGAAAAG+TGG - chr1_4:61934843-61934862 None:intergenic 30.0%
!!! GAACATCTTTTTCAACAATG+TGG + chr1_4:61934907-61934926 Msa0175810:intron 30.0%
!!! TTTATTTTTTTCTGGGTCTC+TGG + chr1_4:61935087-61935106 Msa0175810:intron 30.0%
AAGTGTTATAGCATTATCAC+AGG + chr1_4:61935196-61935215 Msa0175810:CDS 30.0%
CATTATCACAGGTAAAATGT+TGG + chr1_4:61935207-61935226 Msa0175810:intron 30.0%
TTATACTGATCTTATGTTGG+AGG + chr1_4:61935264-61935283 Msa0175810:intron 30.0%
TAAGTGCAACAAATAGGATA+GGG + chr1_4:61935293-61935312 Msa0175810:intron 30.0%
TTCTTATAGCGAGACTATTA+TGG + chr1_4:61935424-61935443 Msa0175810:intron 30.0%
!! GTTTTGGCAAATTTAATGCA+GGG - chr1_4:61935610-61935629 None:intergenic 30.0%
!! AGTTTTGGCAAATTTAATGC+AGG - chr1_4:61935611-61935630 None:intergenic 30.0%
GCGAGATTAAAAGAAAAGTT+AGG - chr1_4:61935730-61935749 None:intergenic 30.0%
! TCTTTTAATCTCGCAATTTC+AGG + chr1_4:61935736-61935755 Msa0175810:intron 30.0%
ACATACAATTCCAATAACTG+GGG + chr1_4:61935768-61935787 Msa0175810:CDS 30.0%
!! TGTTTTTCATTTTTCTCCTG+TGG - chr1_4:61935807-61935826 None:intergenic 30.0%
AGGAGAAAAATGAAAAACAC+TGG + chr1_4:61935808-61935827 Msa0175810:CDS 30.0%
CATTATCATCATTTAGTGAG+TGG + chr1_4:61935854-61935873 Msa0175810:intron 30.0%
TTCATAAAATATGCCACACT+AGG + chr1_4:61936017-61936036 Msa0175810:intron 30.0%
GTAAACAAATGCAATAGAAG+TGG - chr1_4:61936133-61936152 None:intergenic 30.0%
ATGATTATGATCATCACCAT+TGG + chr1_4:61936503-61936522 Msa0175810:intron 30.0%
ATAACAATGACAATTGCCAA+TGG - chr1_4:61936522-61936541 None:intergenic 30.0%
!!! GCAGTATGTTTTAACATACA+TGG - chr1_4:61936708-61936727 None:intergenic 30.0%
!!! AGTTTTGTTGACAATTGTGT+TGG + chr1_4:61936764-61936783 Msa0175810:intron 30.0%
!! GTTTTGTTGACAATTGTGTT+GGG + chr1_4:61936765-61936784 Msa0175810:intron 30.0%
TTGAAGATTTCTTGATTGCA+GGG - chr1_4:61936856-61936875 None:intergenic 30.0%
ATTGAAGATTTCTTGATTGC+AGG - chr1_4:61936857-61936876 None:intergenic 30.0%
CAATCACTTTCATCTTCAAT+TGG + chr1_4:61936894-61936913 Msa0175810:intron 30.0%
! CATTCACTTTACATTTTCCT+TGG - chr1_4:61937081-61937100 None:intergenic 30.0%
!! TGAATGTGAATGCTTTGTTT+CGG + chr1_4:61937095-61937114 Msa0175810:three_prime_UTR 30.0%
!! AGTGATTATGATGCTAGTTT+TGG + chr1_4:61937155-61937174 Msa0175810:three_prime_UTR 30.0%
!!! CATGTCAAAAAAGTGTTTTG+AGG - chr1_4:61937219-61937238 None:intergenic 30.0%
GAAGGGAAAGAAAGTGAAAA+TGG - chr1_4:61925537-61925556 None:intergenic 35.0%
GATTGAGGTTGGAAATTGAA+GGG - chr1_4:61925554-61925573 None:intergenic 35.0%
AGATTGAGGTTGGAAATTGA+AGG - chr1_4:61925555-61925574 None:intergenic 35.0%
AAGTAGTAGATGAAGAAGGA+AGG - chr1_4:61925608-61925627 None:intergenic 35.0%
TGGAAAGTAGTAGATGAAGA+AGG - chr1_4:61925612-61925631 None:intergenic 35.0%
GAAGAAAGAGAAGAAGAAAG+AGG - chr1_4:61925666-61925685 None:intergenic 35.0%
TCAAACTACTTCCATTTCTC+AGG + chr1_4:61925698-61925717 Msa0175810:CDS 35.0%
TCACTCAATCTCTTATTGCT+TGG + chr1_4:61925859-61925878 Msa0175810:CDS 35.0%
ACACCGATACTTTAGATTGA+AGG + chr1_4:61926022-61926041 Msa0175810:intron 35.0%
GGTTGCATTTAGTGTATGTT+TGG + chr1_4:61926057-61926076 Msa0175810:intron 35.0%
CACAAAAGTGATTCGTGTTT+GGG + chr1_4:61926150-61926169 Msa0175810:intron 35.0%
CTATTTGTAACTGATAGGTG+AGG + chr1_4:61926384-61926403 Msa0175810:intron 35.0%
AATTAAGCTGGAAGAGGATA+AGG + chr1_4:61926414-61926433 Msa0175810:CDS 35.0%
! AAAGGGTGTATTACATTTGC+AGG - chr1_4:61926448-61926467 None:intergenic 35.0%
!! AAGCAATCAGAGGTATTTAG+CGG - chr1_4:61926512-61926531 None:intergenic 35.0%
CTATTCCTAAAAGCAATCAG+AGG - chr1_4:61926522-61926541 None:intergenic 35.0%
GTCCCTAAAATATATTCCCA+TGG + chr1_4:61926614-61926633 Msa0175810:intron 35.0%
ATACCTTTCCCAACTTATAG+GGG - chr1_4:61926657-61926676 None:intergenic 35.0%
CATACCTTTCCCAACTTATA+GGG - chr1_4:61926658-61926677 None:intergenic 35.0%
TCATACCTTTCCCAACTTAT+AGG - chr1_4:61926659-61926678 None:intergenic 35.0%
! CAGATTTCACCCTGTAATTT+TGG + chr1_4:61926703-61926722 Msa0175810:intron 35.0%
AATTTGGGCAAGATCTGTAA+AGG - chr1_4:61926746-61926765 None:intergenic 35.0%
CTCAAATAGTCCCTGTAATT+TGG - chr1_4:61926762-61926781 None:intergenic 35.0%
CAAATTACAGGGACTATTTG+AGG + chr1_4:61926760-61926779 Msa0175810:intron 35.0%
! CAAATTGATGGATGAGAATC+AGG - chr1_4:61926792-61926811 None:intergenic 35.0%
CTGATTCTCATCCATCAATT+TGG + chr1_4:61926790-61926809 Msa0175810:intron 35.0%
! TCTTCTTTTTGACAATGTGG+TGG + chr1_4:61926941-61926960 Msa0175810:intron 35.0%
GCAAACTTTGTGTTTATAGG+TGG + chr1_4:61926994-61927013 Msa0175810:intron 35.0%
AACTTTGTGTTTATAGGTGG+TGG + chr1_4:61926997-61927016 Msa0175810:intron 35.0%
GAACTAATATCTGAACTGGA+AGG - chr1_4:61927064-61927083 None:intergenic 35.0%
TTCTCTTCTTAAATCCCAGT+TGG + chr1_4:61927081-61927100 Msa0175810:CDS 35.0%
ATAAATAACAACCGCCAACT+GGG - chr1_4:61927098-61927117 None:intergenic 35.0%
! AAAAGCTCATCTAAAACACC+AGG - chr1_4:61927445-61927464 None:intergenic 35.0%
AAGCTGTATCACTTTACTTG+TGG + chr1_4:61927503-61927522 Msa0175810:CDS 35.0%
AGCTGTATCACTTTACTTGT+GGG + chr1_4:61927504-61927523 Msa0175810:CDS 35.0%
AGAAAATATACTTGAGCGGT+AGG - chr1_4:61927532-61927551 None:intergenic 35.0%
CTCAAGAGGAACAATTTCTA+TGG - chr1_4:61927694-61927713 None:intergenic 35.0%
CATAGAAATTGTTCCTCTTG+AGG + chr1_4:61927692-61927711 Msa0175810:CDS 35.0%
GAACTAAAGGGCCAAAAAAT+TGG + chr1_4:61927733-61927752 Msa0175810:CDS 35.0%
CTAATGATCCATATGCTAGA+GGG + chr1_4:61927826-61927845 Msa0175810:CDS 35.0%
TAAACATACCCTCTAGCATA+TGG - chr1_4:61927837-61927856 None:intergenic 35.0%
TTAAGCAGACTTTCATCAGA+CGG + chr1_4:61927970-61927989 Msa0175810:intron 35.0%
!! GGCATACACATGTTTTTCAA+AGG - chr1_4:61928174-61928193 None:intergenic 35.0%
!!! TGTCTGATTTTTAGTTCTCC+TGG + chr1_4:61928260-61928279 Msa0175810:intron 35.0%
TAAAGATATCTGGAGAAACC+AGG - chr1_4:61928281-61928300 None:intergenic 35.0%
TGGTTTCTCCAGATATCTTT+AGG + chr1_4:61928280-61928299 Msa0175810:intron 35.0%
AGGCAGCAAAACAAACAAAA+AGG - chr1_4:61928653-61928672 None:intergenic 35.0%
TTGCCAACATTTCAATTTGC+TGG + chr1_4:61928778-61928797 Msa0175810:CDS 35.0%
! TGCCAACATTTCAATTTGCT+GGG + chr1_4:61928779-61928798 Msa0175810:CDS 35.0%
! TTGATGATCAAAAGGAGAAC+TGG + chr1_4:61928803-61928822 Msa0175810:CDS 35.0%
GTTTCGTGAAAGATGTTTGT+AGG - chr1_4:61928896-61928915 None:intergenic 35.0%
! ACTTTGATGGATATAACTGG+GGG + chr1_4:61929314-61929333 Msa0175810:CDS 35.0%
AGCTATGCAAGTAATCCAAA+TGG + chr1_4:61929452-61929471 Msa0175810:CDS 35.0%
TACTGTCTACAATCATTTGC+AGG + chr1_4:61929699-61929718 Msa0175810:CDS 35.0%
ACTGTCTACAATCATTTGCA+GGG + chr1_4:61929700-61929719 Msa0175810:CDS 35.0%
TACAATCATTTGCAGGGAAA+TGG + chr1_4:61929706-61929725 Msa0175810:CDS 35.0%
ACAATCATTTGCAGGGAAAT+GGG + chr1_4:61929707-61929726 Msa0175810:CDS 35.0%
AGGACAGAATGTTCATCAAA+GGG - chr1_4:61929733-61929752 None:intergenic 35.0%
AAGGACAGAATGTTCATCAA+AGG - chr1_4:61929734-61929753 None:intergenic 35.0%
TGAACATTCTGTCCTTGATA+AGG + chr1_4:61929738-61929757 Msa0175810:CDS 35.0%
GATAATTCCTGACCTTATCA+AGG - chr1_4:61929753-61929772 None:intergenic 35.0%
TTCCAGGTTACTATCTAAGA+AGG + chr1_4:61929906-61929925 Msa0175810:CDS 35.0%
TTCCTTCTTAGATAGTAACC+TGG - chr1_4:61929911-61929930 None:intergenic 35.0%
TATCTAAGAAGGAACACAGA+TGG + chr1_4:61929917-61929936 Msa0175810:CDS 35.0%
AACAACAACAACAATCACCA+CGG - chr1_4:61930069-61930088 None:intergenic 35.0%
CCAATAAAGATTTCATGAGC+GGG - chr1_4:61930247-61930266 None:intergenic 35.0%
! GGGAAAGTATAATTAAGGTG+AGG - chr1_4:61930370-61930389 None:intergenic 35.0%
AAAAGAACTTCAGCAGTTTC+TGG + chr1_4:61930661-61930680 Msa0175810:intron 35.0%
ACCCATAATCCAAAATCAGA+GGG - chr1_4:61930687-61930706 None:intergenic 35.0%
AACCCATAATCCAAAATCAG+AGG - chr1_4:61930688-61930707 None:intergenic 35.0%
AATGCATGACAAGGCTAATA+TGG + chr1_4:61930815-61930834 Msa0175810:intron 35.0%
! TAATATGGTTGGTCATAACC+TGG + chr1_4:61930830-61930849 Msa0175810:intron 35.0%
GTCAAAATAAAGCTGAGAAC+TGG - chr1_4:61930877-61930896 None:intergenic 35.0%
AAAGAAAAGGATGGAGTTGA+TGG + chr1_4:61931039-61931058 Msa0175810:CDS 35.0%
AGACAACATGTGAATGAAGA+GGG - chr1_4:61931148-61931167 None:intergenic 35.0%
AAGACAACATGTGAATGAAG+AGG - chr1_4:61931149-61931168 None:intergenic 35.0%
AAAACAGATATGGTGAAGGA+TGG + chr1_4:61931207-61931226 Msa0175810:intron 35.0%
AAACAGATATGGTGAAGGAT+GGG + chr1_4:61931208-61931227 Msa0175810:intron 35.0%
TTTGGTGAAGTTGCCAAAAA+TGG + chr1_4:61931233-61931252 Msa0175810:CDS 35.0%
TTGGTGAAGTTGCCAAAAAT+GGG + chr1_4:61931234-61931253 Msa0175810:CDS 35.0%
AATCTTGCTGGAACACAAAT+TGG + chr1_4:61931281-61931300 Msa0175810:CDS 35.0%
ATCTTGCTGGAACACAAATT+GGG + chr1_4:61931282-61931301 Msa0175810:CDS 35.0%
CATGTACAAGATAGAACTTC+TGG + chr1_4:61931370-61931389 Msa0175810:intron 35.0%
CGATGTAAGTTCAACTGATA+TGG + chr1_4:61931461-61931480 Msa0175810:intron 35.0%
AATAATTATCAGTAGGCCAC+AGG - chr1_4:61931805-61931824 None:intergenic 35.0%
GGATACAGAAAACATCTAAG+GGG - chr1_4:61931853-61931872 None:intergenic 35.0%
AAATGGGCATCTAATAGGAA+TGG - chr1_4:61931874-61931893 None:intergenic 35.0%
ATTGCATGCAAGCACTAAAA+GGG - chr1_4:61931988-61932007 None:intergenic 35.0%
AATTGCATGCAAGCACTAAA+AGG - chr1_4:61931989-61932008 None:intergenic 35.0%
AAAATATCAAGTTTGCCAGC+AGG - chr1_4:61932210-61932229 None:intergenic 35.0%
GTCTGTTTCAGCATTTGAAT+AGG + chr1_4:61932292-61932311 Msa0175810:intron 35.0%
! TTCTCTGTGCAAAATTTTGG+AGG + chr1_4:61932377-61932396 Msa0175810:intron 35.0%
! TCTCTGTGCAAAATTTTGGA+GGG + chr1_4:61932378-61932397 Msa0175810:intron 35.0%
TACCAAGTATCCATCTTAAG+GGG - chr1_4:61932529-61932548 None:intergenic 35.0%
CTACCAAGTATCCATCTTAA+GGG - chr1_4:61932530-61932549 None:intergenic 35.0%
CGATCTGCATATACATTTGA+CGG + chr1_4:61932591-61932610 Msa0175810:intron 35.0%
GATCTGCATATACATTTGAC+GGG + chr1_4:61932592-61932611 Msa0175810:intron 35.0%
TTGATCGGAATAGTGATAAC+AGG - chr1_4:61932778-61932797 None:intergenic 35.0%
GTTTATTAGATTGGAATGGC+TGG + chr1_4:61932831-61932850 Msa0175810:intron 35.0%
ATTCCAATAGACATAGCAAG+TGG - chr1_4:61932914-61932933 None:intergenic 35.0%
TTTATTCTGCTGAGAATGGA+TGG + chr1_4:61933136-61933155 Msa0175810:intron 35.0%
! GGAGAGAACCAAAATTTTCT+TGG - chr1_4:61933249-61933268 None:intergenic 35.0%
AAACTCAAGATTCATGAGTC+AGG - chr1_4:61933570-61933589 None:intergenic 35.0%
CATGAATCTTGAGTTTGTAG+TGG + chr1_4:61933574-61933593 Msa0175810:intron 35.0%
! AATCTTGAGTTTGTAGTGGA+GGG + chr1_4:61933578-61933597 Msa0175810:intron 35.0%
TCTCACCTCGAATATAGATA+TGG + chr1_4:61933662-61933681 Msa0175810:intron 35.0%
TTTGGCCATATCTATATTCG+AGG - chr1_4:61933670-61933689 None:intergenic 35.0%
CAATGGCAGTAGTAGATAAA+TGG + chr1_4:61933965-61933984 Msa0175810:CDS 35.0%
! GTTCTTGAAGTATCAAACTG+AGG + chr1_4:61934058-61934077 Msa0175810:intron 35.0%
!!! TTTTAGTTCCCCCAAATTAG+GGG + chr1_4:61934339-61934358 Msa0175810:intron 35.0%
TACAAAATCCCCCTAATTTG+GGG - chr1_4:61934351-61934370 None:intergenic 35.0%
! ATTTTATCAGGTGAAAGGGT+CGG + chr1_4:61934730-61934749 Msa0175810:intron 35.0%
!! TCGGAAGTATTAACATATGG+TGG + chr1_4:61934749-61934768 Msa0175810:CDS 35.0%
!! CGGAAGTATTAACATATGGT+GGG + chr1_4:61934750-61934769 Msa0175810:CDS 35.0%
ATACACTTACAGTCTCTATG+GGG - chr1_4:61934799-61934818 None:intergenic 35.0%
GAATACACTTACAGTCTCTA+TGG - chr1_4:61934801-61934820 None:intergenic 35.0%
TAAGCTCACAATGTCAAAGA+GGG - chr1_4:61935016-61935035 None:intergenic 35.0%
TTAAGCTCACAATGTCAAAG+AGG - chr1_4:61935017-61935036 None:intergenic 35.0%
CTTTGACATTGTGAGCTTAA+AGG + chr1_4:61935017-61935036 Msa0175810:CDS 35.0%
! CTATAACACTTGTTGCCAAA+TGG - chr1_4:61935187-61935206 None:intergenic 35.0%
CTTCAGTAAGTGCAACAAAT+AGG + chr1_4:61935287-61935306 Msa0175810:intron 35.0%
GTAAGTGCAACAAATAGGAT+AGG + chr1_4:61935292-61935311 Msa0175810:intron 35.0%
TCATCACCAGAGTGAAAAAA+TGG - chr1_4:61935479-61935498 None:intergenic 35.0%
!! TTTTCATTTTTCTCCTGTGG+AGG - chr1_4:61935804-61935823 None:intergenic 35.0%
TCTTCAAATGCATGCCTTAA+CGG + chr1_4:61935877-61935896 Msa0175810:intron 35.0%
TAATTTCTAAGCGCACTTGT+TGG + chr1_4:61935988-61936007 Msa0175810:intron 35.0%
GTTGTTGCAGTTGTGATTTA+AGG + chr1_4:61936088-61936107 Msa0175810:intron 35.0%
TTTCAGAATGAAACCAAGAC+TGG + chr1_4:61936182-61936201 Msa0175810:intron 35.0%
AGAAATTGTCCATTGTAGCT+AGG - chr1_4:61936242-61936261 None:intergenic 35.0%
TCTTAAACCTGTTGCGTATA+AGG + chr1_4:61936259-61936278 Msa0175810:CDS 35.0%
AAGAATACCTTATACGCAAC+AGG - chr1_4:61936269-61936288 None:intergenic 35.0%
!! ATAGTGATGAGCATTGAAGA+TGG + chr1_4:61936647-61936666 Msa0175810:CDS 35.0%
TGAAAGTGATTGTACCTGAA+CGG - chr1_4:61936886-61936905 None:intergenic 35.0%
TCAAAATATGAGGCTTCTTC+TGG + chr1_4:61937012-61937031 Msa0175810:CDS 35.0%
!! GAATGTGAATGCTTTGTTTC+GGG + chr1_4:61937096-61937115 Msa0175810:three_prime_UTR 35.0%
TGATGGAAGAAGATTGAGGT+TGG - chr1_4:61925565-61925584 None:intergenic 40.0%
! GGAATGATGGAAGAAGATTG+AGG - chr1_4:61925569-61925588 None:intergenic 40.0%
GAAAGAGAAGAAGAAAGAGG+TGG - chr1_4:61925663-61925682 None:intergenic 40.0%
AAGCATCTTTGCTGGAAAGT+AGG - chr1_4:61925917-61925936 None:intergenic 40.0%
!! GTTCAAAGAAGCATCTTTGC+TGG - chr1_4:61925925-61925944 None:intergenic 40.0%
! CCGCCTTCAATCTAAAGTAT+CGG - chr1_4:61926028-61926047 None:intergenic 40.0%
CCGATACTTTAGATTGAAGG+CGG + chr1_4:61926025-61926044 Msa0175810:intron 40.0%
CGATACTTTAGATTGAAGGC+GGG + chr1_4:61926026-61926045 Msa0175810:intron 40.0%
GCACAAAAGTGATTCGTGTT+TGG + chr1_4:61926149-61926168 Msa0175810:intron 40.0%
GGTGTATTACATTTGCAGGA+AGG - chr1_4:61926444-61926463 None:intergenic 40.0%
GGTGAGAGAGTGATAGTTTA+TGG - chr1_4:61926559-61926578 None:intergenic 40.0%
CTATCACTCTCTCACCAATT+TGG + chr1_4:61926563-61926582 Msa0175810:intron 40.0%
! TAACCCCTATAAGTTGGGAA+AGG + chr1_4:61926651-61926670 Msa0175810:intron 40.0%
ACAGATCTTGCCCAAATTAC+AGG + chr1_4:61926748-61926767 Msa0175810:intron 40.0%
CAGATCTTGCCCAAATTACA+GGG + chr1_4:61926749-61926768 Msa0175810:intron 40.0%
TAACTGAGGGACCAAATTGA+TGG - chr1_4:61926804-61926823 None:intergenic 40.0%
AATTTGGTCCCTCAGTTAAC+TGG + chr1_4:61926806-61926825 Msa0175810:intron 40.0%
! TCCCTCAGTTAACTGGTTTA+GGG + chr1_4:61926813-61926832 Msa0175810:intron 40.0%
TCCCTAAACCAGTTAACTGA+GGG - chr1_4:61926817-61926836 None:intergenic 40.0%
TGGTTTAGGGACCAAATTGA+TGG + chr1_4:61926826-61926845 Msa0175810:intron 40.0%
! TAGGGACCAAATTGATGGAT+AGG + chr1_4:61926831-61926850 Msa0175810:intron 40.0%
GAGAAATTTCCACACATTCG+AGG + chr1_4:61927019-61927038 Msa0175810:CDS 40.0%
TCTTCTTAAATCCCAGTTGG+CGG + chr1_4:61927084-61927103 Msa0175810:CDS 40.0%
CATAAATAACAACCGCCAAC+TGG - chr1_4:61927099-61927118 None:intergenic 40.0%
CAGCTGAGCAAAATCATGAA+AGG - chr1_4:61927387-61927406 None:intergenic 40.0%
AGGTTGAAGAGAATGTCCAT+AGG - chr1_4:61927577-61927596 None:intergenic 40.0%
TACATCTATAAGCACCCATC+AGG + chr1_4:61927660-61927679 Msa0175810:CDS 40.0%
AGAAATTGTTCCTCTTGAGG+AGG + chr1_4:61927695-61927714 Msa0175810:CDS 40.0%
ACGGTGTTTGGAGAACTAAA+GGG + chr1_4:61927721-61927740 Msa0175810:CDS 40.0%
GCTAATGATCCATATGCTAG+AGG + chr1_4:61927825-61927844 Msa0175810:CDS 40.0%
TCCATCAGGTTTCAACTCAT+CGG - chr1_4:61928025-61928044 None:intergenic 40.0%
! ATGAGTTGAAACCTGATGGA+TGG + chr1_4:61928025-61928044 Msa0175810:CDS 40.0%
! TGAGTTGAAACCTGATGGAT+GGG + chr1_4:61928026-61928045 Msa0175810:CDS 40.0%
ACTGTATGGCAACAAGCAAA+AGG - chr1_4:61928477-61928496 None:intergenic 40.0%
TGTTGGCAATAGATGGACAT+GGG - chr1_4:61928767-61928786 None:intergenic 40.0%
ATGTTGGCAATAGATGGACA+TGG - chr1_4:61928768-61928787 None:intergenic 40.0%
!! GCCAACATTTCAATTTGCTG+GGG + chr1_4:61928780-61928799 Msa0175810:CDS 40.0%
ACCCCAGCAAATTGAAATGT+TGG - chr1_4:61928784-61928803 None:intergenic 40.0%
AAGGAGAACTGGAGAAATGT+TGG + chr1_4:61928814-61928833 Msa0175810:CDS 40.0%
GCGAAAAAGGATTTCTTCAG+TGG - chr1_4:61928860-61928879 None:intergenic 40.0%
! AGGGCGTTTAAATGCGAAAA+AGG - chr1_4:61928873-61928892 None:intergenic 40.0%
CGTGAAAGATGTTTGTAGGA+GGG - chr1_4:61928892-61928911 None:intergenic 40.0%
TCGTGAAAGATGTTTGTAGG+AGG - chr1_4:61928893-61928912 None:intergenic 40.0%
TATGCTTTCCACTGTCTTCA+GGG + chr1_4:61929067-61929086 Msa0175810:intron 40.0%
TAAAGTTTCCCTGAAGACAG+TGG - chr1_4:61929078-61929097 None:intergenic 40.0%
AGAGATGCCTACATAGACAT+AGG - chr1_4:61929138-61929157 None:intergenic 40.0%
TGTCTATGTAGGCATCTCTA+AGG + chr1_4:61929139-61929158 Msa0175810:intron 40.0%
AAAGCTGCAAGATAGAAGGA+TGG - chr1_4:61929182-61929201 None:intergenic 40.0%
CACCATTCTGATAGATACGT+CGG + chr1_4:61929231-61929250 Msa0175810:intron 40.0%
TACCGACGTATCTATCAGAA+TGG - chr1_4:61929236-61929255 None:intergenic 40.0%
ACAGCCATCCAAAACTTTGA+TGG + chr1_4:61929301-61929320 Msa0175810:CDS 40.0%
GTGTTTGAATTGTCCATCAC+TGG - chr1_4:61929353-61929372 None:intergenic 40.0%
! AAAGGTACAACCCTGTTCTT+TGG + chr1_4:61929414-61929433 Msa0175810:intron 40.0%
AAGGTACAACCCTGTTCTTT+GGG + chr1_4:61929415-61929434 Msa0175810:intron 40.0%
TACTTGCATAGCTGCCTTTA+GGG - chr1_4:61929445-61929464 None:intergenic 40.0%
TTACTTGCATAGCTGCCTTT+AGG - chr1_4:61929446-61929465 None:intergenic 40.0%
! ATTGTACGGTTTGGACCATT+TGG - chr1_4:61929470-61929489 None:intergenic 40.0%
CGAAACTCAATTGTACGGTT+TGG - chr1_4:61929479-61929498 None:intergenic 40.0%
TGAGTTTCGTAAGATGGTTC+AGG + chr1_4:61929490-61929509 Msa0175810:CDS 40.0%
!!! TCTTTTGTTGTTCCGTCTCT+TGG + chr1_4:61929623-61929642 Msa0175810:intron 40.0%
ATTCTGTCCTTGATAAGGTC+AGG + chr1_4:61929743-61929762 Msa0175810:intron 40.0%
! TGTTAGCCTATCTACTTCTG+TGG + chr1_4:61929858-61929877 Msa0175810:intron 40.0%
TTCACACCACAGAAGTAGAT+AGG - chr1_4:61929867-61929886 None:intergenic 40.0%
ACACTGGGCAGTCAATTATA+AGG + chr1_4:61930021-61930040 Msa0175810:CDS 40.0%
CCCGCTCATGAAATCTTTAT+TGG + chr1_4:61930244-61930263 Msa0175810:intron 40.0%
TGGGTTCAGATTTGACCTTA+TGG + chr1_4:61930474-61930493 Msa0175810:CDS 40.0%
GGGTTCAGATTTGACCTTAT+GGG + chr1_4:61930475-61930494 Msa0175810:CDS 40.0%
! GCCCTCTGATTTTGGATTAT+GGG + chr1_4:61930683-61930702 Msa0175810:intron 40.0%
CATGACAAGGCTAATATGGT+TGG + chr1_4:61930819-61930838 Msa0175810:intron 40.0%
!! CTGAGAACTGGTGTTGTATA+TGG - chr1_4:61930865-61930884 None:intergenic 40.0%
GATTATTAAGCAGCATGTGG+TGG - chr1_4:61931327-61931346 None:intergenic 40.0%
TCACAAAACCCTGTTGAAGA+GGG - chr1_4:61931654-61931673 None:intergenic 40.0%
!! AAGACTAGTTTGCAATCCTG+TGG + chr1_4:61931786-61931805 Msa0175810:intron 40.0%
GTGGAAAATGGGCATCTAAT+AGG - chr1_4:61931879-61931898 None:intergenic 40.0%
!! ATCCTATTTCTGCAGCCTAA+TGG + chr1_4:61932038-61932057 Msa0175810:intron 40.0%
GTTCCATGATCATAGCCATT+AGG - chr1_4:61932056-61932075 None:intergenic 40.0%
ATCCATGCTTTCTGCATCAA+TGG + chr1_4:61932091-61932110 Msa0175810:CDS 40.0%
ATCCATTGATGCAGAAAGCA+TGG - chr1_4:61932096-61932115 None:intergenic 40.0%
! AATGGATCACATCCAGGTTT+TGG + chr1_4:61932109-61932128 Msa0175810:intron 40.0%
CTTACAAACTCCCCTTAAGA+TGG + chr1_4:61932516-61932535 Msa0175810:intron 40.0%
GCTACCAAGTATCCATCTTA+AGG - chr1_4:61932531-61932550 None:intergenic 40.0%
GCACACTAACTAAGAGAGAA+GGG - chr1_4:61932678-61932697 None:intergenic 40.0%
AGCACACTAACTAAGAGAGA+AGG - chr1_4:61932679-61932698 None:intergenic 40.0%
CTCTTAGTTAGTGTGCTTTG+TGG + chr1_4:61932682-61932701 Msa0175810:intron 40.0%
TTTGTACTAACCAACTCCCA+AGG + chr1_4:61932867-61932886 Msa0175810:CDS 40.0%
TGTCAATACCTCTTGTCCTT+GGG - chr1_4:61932886-61932905 None:intergenic 40.0%
ATGTCAATACCTCTTGTCCT+TGG - chr1_4:61932887-61932906 None:intergenic 40.0%
!! AGGACAAGAGGTATTGACAT+TGG + chr1_4:61932887-61932906 Msa0175810:intron 40.0%
GTGAATAAAAGGGAAACCAC+AGG - chr1_4:61933346-61933365 None:intergenic 40.0%
! TCACAGTTGCTTTCGAATTG+TGG + chr1_4:61933519-61933538 Msa0175810:intron 40.0%
! CACAGTTGCTTTCGAATTGT+GGG + chr1_4:61933520-61933539 Msa0175810:intron 40.0%
GAATCTTGAGTTTGTAGTGG+AGG + chr1_4:61933577-61933596 Msa0175810:intron 40.0%
TGGCAAGTGATGACAATGTT+AGG + chr1_4:61933616-61933635 Msa0175810:intron 40.0%
TTAGGAATCGACGATTGCTT+TGG - chr1_4:61933688-61933707 None:intergenic 40.0%
!! GCAATCGTCGATTCCTAATA+AGG + chr1_4:61933690-61933709 Msa0175810:intron 40.0%
!! AGGATTGTCCAAGCCTTATT+AGG - chr1_4:61933706-61933725 None:intergenic 40.0%
TAAAGCTAGCTCAAGAGATG+AGG - chr1_4:61933726-61933745 None:intergenic 40.0%
GGTGGTCCAATAACAGATTT+AGG - chr1_4:61933800-61933819 None:intergenic 40.0%
AGGACTGAACATATAGAGTG+TGG - chr1_4:61933832-61933851 None:intergenic 40.0%
AACAATATTGTCTCGCGCTT+AGG - chr1_4:61933852-61933871 None:intergenic 40.0%
GCAGTAGTAGATAAATGGAG+AGG + chr1_4:61933970-61933989 Msa0175810:CDS 40.0%
GTAGTAGATAAATGGAGAGG+TGG + chr1_4:61933973-61933992 Msa0175810:CDS 40.0%
GACAAAGTTGTAAGTACAGG+TGG + chr1_4:61934003-61934022 Msa0175810:CDS 40.0%
! CTTGAAGTATCAAACTGAGG+TGG + chr1_4:61934061-61934080 Msa0175810:intron 40.0%
CGACTAGAATCAGAACTCTT+AGG + chr1_4:61934123-61934142 Msa0175810:intron 40.0%
AACTCTTAGGCTCTGTTTGT+GGG + chr1_4:61934136-61934155 Msa0175810:intron 40.0%
TATTGGAGGAGGAGTTTGAA+GGG - chr1_4:61934314-61934333 None:intergenic 40.0%
! TTTAGTTCCCCCAAATTAGG+GGG + chr1_4:61934340-61934359 Msa0175810:intron 40.0%
ACAAAATCCCCCTAATTTGG+GGG - chr1_4:61934350-61934369 None:intergenic 40.0%
TGGAAAGAATGGAGAGCTAT+GGG - chr1_4:61934408-61934427 None:intergenic 40.0%
ATGGAAAGAATGGAGAGCTA+TGG - chr1_4:61934409-61934428 None:intergenic 40.0%
GAGGGCTTGTAAAAAAAGGA+AGG - chr1_4:61934437-61934456 None:intergenic 40.0%
AAGGGAGGGCTTGTAAAAAA+AGG - chr1_4:61934441-61934460 None:intergenic 40.0%
TACATGCTCTATGGAGATCA+TGG + chr1_4:61934545-61934564 Msa0175810:intron 40.0%
!! GGGTCGGAAGTATTAACATA+TGG + chr1_4:61934746-61934765 Msa0175810:CDS 40.0%
GTATTCCATAGTATATCCCC+TGG + chr1_4:61934815-61934834 Msa0175810:intron 40.0%
TATTCACTTTCAGACTCCGT+CGG + chr1_4:61935130-61935149 Msa0175810:intron 40.0%
GAGATGCAGGATAAACCATT+TGG + chr1_4:61935169-61935188 Msa0175810:CDS 40.0%
TGCAACAAATAGGATAGGGT+AGG + chr1_4:61935297-61935316 Msa0175810:intron 40.0%
!!! GGCATACCATTTTTTCACTC+TGG + chr1_4:61935470-61935489 Msa0175810:CDS 40.0%
GATCGAGATTCATACAACTC+CGG + chr1_4:61935521-61935540 Msa0175810:CDS 40.0%
ATCGAGATTCATACAACTCC+GGG + chr1_4:61935522-61935541 Msa0175810:CDS 40.0%
AATTCCAATAACTGGGGTGT+TGG + chr1_4:61935774-61935793 Msa0175810:CDS 40.0%
TTCGTTAATCTGCACCGTTA+AGG - chr1_4:61935894-61935913 None:intergenic 40.0%
CAATGTAATGCTGGGTAAGT+CGG - chr1_4:61936046-61936065 None:intergenic 40.0%
GATTGACATCCTAGCTACAA+TGG + chr1_4:61936230-61936249 Msa0175810:CDS 40.0%
! AGCATTGAAGATGGTCATGA+TGG + chr1_4:61936656-61936675 Msa0175810:CDS 40.0%
GATTTCTTGATTGCAGGGAA+GGG - chr1_4:61936851-61936870 None:intergenic 40.0%
AGATTTCTTGATTGCAGGGA+AGG - chr1_4:61936852-61936871 None:intergenic 40.0%
GAAAGTGATTGTACCTGAAC+GGG - chr1_4:61936885-61936904 None:intergenic 40.0%
! AAATGAGGCGTTTGATTCCA+TGG + chr1_4:61936942-61936961 Msa0175810:intron 40.0%
!! GTTGTTTTGTTGTGTCTCGA+AGG + chr1_4:61937034-61937053 Msa0175810:CDS 40.0%
!!! GATGCTAGTTTTGGTTCATC+AGG + chr1_4:61937164-61937183 Msa0175810:three_prime_UTR 40.0%
!!! CTAGTTTTGGTTCATCAGGA+TGG + chr1_4:61937168-61937187 Msa0175810:three_prime_UTR 40.0%
! GAAGAAGGAAGGTACAGTGA+AGG - chr1_4:61925597-61925616 None:intergenic 45.0%
GAATGCGAAGTGAAGTAGTG+TGG - chr1_4:61925632-61925651 None:intergenic 45.0%
AGAAGAAGAAAGAGGTGGTG+GGG - chr1_4:61925658-61925677 None:intergenic 45.0%
GAGAAGAAGAAAGAGGTGGT+GGG - chr1_4:61925659-61925678 None:intergenic 45.0%
AGAGAAGAAGAAAGAGGTGG+TGG - chr1_4:61925660-61925679 None:intergenic 45.0%
GGAAGTAGTTTGATCGACAG+AGG - chr1_4:61925691-61925710 None:intergenic 45.0%
!! GATTGAAGGCGGGTTATATG+TGG + chr1_4:61926036-61926055 Msa0175810:intron 45.0%
! GTCCCTCAGTTAACTGGTTT+AGG + chr1_4:61926812-61926831 Msa0175810:intron 45.0%
GTCCCTAAACCAGTTAACTG+AGG - chr1_4:61926818-61926837 None:intergenic 45.0%
GCTTTGTAACCTCGAATGTG+TGG - chr1_4:61927031-61927050 None:intergenic 45.0%
CTCAGCTGATGAGAAATGCA+GGG + chr1_4:61927399-61927418 Msa0175810:intron 45.0%
!! TGTACTGGTTTGCAGTTACC+TGG + chr1_4:61927424-61927443 Msa0175810:CDS 45.0%
CTATGGGATCATCTCCTGAT+GGG - chr1_4:61927677-61927696 None:intergenic 45.0%
TCTATGGGATCATCTCCTGA+TGG - chr1_4:61927678-61927697 None:intergenic 45.0%
CACGGTGTTTGGAGAACTAA+AGG + chr1_4:61927720-61927739 Msa0175810:CDS 45.0%
! TCCGATGAGTTGAAACCTGA+TGG + chr1_4:61928021-61928040 Msa0175810:CDS 45.0%
! ACCTGATGGATGGGAAAATC+TGG + chr1_4:61928035-61928054 Msa0175810:CDS 45.0%
GGCTTAAATTGCTTGCCAGT+CGG + chr1_4:61928301-61928320 Msa0175810:intron 45.0%
GTGTATAGACAACTACCGAC+TGG - chr1_4:61928319-61928338 None:intergenic 45.0%
GAGAGATCATTGGCACTGTA+TGG - chr1_4:61928491-61928510 None:intergenic 45.0%
AGATAACCACCGCGAAATTC+AGG - chr1_4:61928521-61928540 None:intergenic 45.0%
!! TGCTGGGGTTGATGATCAAA+AGG + chr1_4:61928795-61928814 Msa0175810:CDS 45.0%
CTATGCTTTCCACTGTCTTC+AGG + chr1_4:61929066-61929085 Msa0175810:intron 45.0%
TCTGATAGATACGTCGGTAC+TGG + chr1_4:61929237-61929256 Msa0175810:intron 45.0%
TGTTGCTGATCTGAATCAGG+TGG - chr1_4:61929271-61929290 None:intergenic 45.0%
! GCTTGTTGCTGATCTGAATC+AGG - chr1_4:61929274-61929293 None:intergenic 45.0%
AGGTACAACCCTGTTCTTTG+GGG + chr1_4:61929416-61929435 Msa0175810:intron 45.0%
TTGCAGGCTCTTAGTCATAC+TGG + chr1_4:61929658-61929677 Msa0175810:intron 45.0%
CAGTATCCAACACAACACGA+AGG - chr1_4:61929684-61929703 None:intergenic 45.0%
TCCTCGATGATCTTGTACAC+TGG + chr1_4:61930005-61930024 Msa0175810:CDS 45.0%
CCTCGATGATCTTGTACACT+GGG + chr1_4:61930006-61930025 Msa0175810:CDS 45.0%
GTTTATATCTTCACTCGCCG+TGG + chr1_4:61930049-61930068 Msa0175810:intron 45.0%
!!! AGTTTCTGGCCCTCTGATTT+TGG + chr1_4:61930675-61930694 Msa0175810:intron 45.0%
! GGCCCTCTGATTTTGGATTA+TGG + chr1_4:61930682-61930701 Msa0175810:intron 45.0%
TGATTTCGTGACATGGATGC+AGG + chr1_4:61930984-61931003 Msa0175810:intron 45.0%
TATGGTGAAGGATGGGACTT+TGG + chr1_4:61931215-61931234 Msa0175810:CDS 45.0%
AAGTTGCCAAAAATGGGCGT+GGG + chr1_4:61931240-61931259 Msa0175810:CDS 45.0%
! GTTTATCCCACGCCCATTTT+TGG - chr1_4:61931249-61931268 None:intergenic 45.0%
GCTTCTCAGTTCAATCTTGC+TGG + chr1_4:61931269-61931288 Msa0175810:CDS 45.0%
TTGCTGGAACACAAATTGGG+AGG + chr1_4:61931285-61931304 Msa0175810:CDS 45.0%
TGGAACACAAATTGGGAGGT+AGG + chr1_4:61931289-61931308 Msa0175810:intron 45.0%
! AAGCAGCATGTGGTGGAAAA+AGG - chr1_4:61931320-61931339 None:intergenic 45.0%
AAATGGAGATCCACCAAGCA+CGG - chr1_4:61931626-61931645 None:intergenic 45.0%
GTCACAAAACCCTGTTGAAG+AGG - chr1_4:61931655-61931674 None:intergenic 45.0%
!! CTTCAACAGGGTTTTGTGAC+TGG + chr1_4:61931655-61931674 Msa0175810:CDS 45.0%
!!! TGTGACTGGTCTACTTTTGC+AGG + chr1_4:61931669-61931688 Msa0175810:CDS 45.0%
ATCAAGAAGCTTGAGAAGGG+AGG - chr1_4:61931737-61931756 None:intergenic 45.0%
AGCCATTAGGCTGCAGAAAT+AGG - chr1_4:61932043-61932062 None:intergenic 45.0%
CAGCCTAATGGCTATGATCA+TGG + chr1_4:61932050-61932069 Msa0175810:intron 45.0%
TGCATCAATGGATCACATCC+AGG + chr1_4:61932103-61932122 Msa0175810:CDS 45.0%
TTGAATATTGCAGTGCCTGC+TGG + chr1_4:61932192-61932211 Msa0175810:intron 45.0%
CTCCCCTTAAGATGGATACT+TGG + chr1_4:61932524-61932543 Msa0175810:intron 45.0%
!! GGTCCACTTGCTATGTCTAT+TGG + chr1_4:61932908-61932927 Msa0175810:intron 45.0%
TGCTGAGAATGGATGGTTGT+TGG + chr1_4:61933143-61933162 Msa0175810:intron 45.0%
GCTGAGAATGGATGGTTGTT+GGG + chr1_4:61933144-61933163 Msa0175810:intron 45.0%
CTGAGAATGGATGGTTGTTG+GGG + chr1_4:61933145-61933164 Msa0175810:intron 45.0%
AAGCTCTCGAATTCTTGGAG+GGG - chr1_4:61933270-61933289 None:intergenic 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - chr1_4:61933271-61933290 None:intergenic 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr1_4:61933275-61933294 None:intergenic 45.0%
!! CGTCGATTCCTAATAAGGCT+TGG + chr1_4:61933695-61933714 Msa0175810:intron 45.0%
AGAGTGTGGTGAAATATGGG+TGG - chr1_4:61933818-61933837 None:intergenic 45.0%
GCGCGAGACAATATTGTTGT+CGG + chr1_4:61933854-61933873 Msa0175810:intron 45.0%
! TCTGGAGCATGGACATATAC+AGG - chr1_4:61933884-61933903 None:intergenic 45.0%
! CCATAGACAAATCTGGAGCA+TGG - chr1_4:61933895-61933914 None:intergenic 45.0%
CCATGCTCCAGATTTGTCTA+TGG + chr1_4:61933892-61933911 Msa0175810:intron 45.0%
! GTTGAGGTGTTAGAGAAGAG+TGG + chr1_4:61933939-61933958 Msa0175810:intron 45.0%
TTAGAGAAGAGTGGCAGCAA+TGG + chr1_4:61933948-61933967 Msa0175810:intron 45.0%
GAACTCTTAGGCTCTGTTTG+TGG + chr1_4:61934135-61934154 Msa0175810:intron 45.0%
TTAGGCTCTGTTTGTGGGTT+TGG + chr1_4:61934141-61934160 Msa0175810:intron 45.0%
! GGAGGAGTTTGAAGGGTTTT+GGG - chr1_4:61934307-61934326 None:intergenic 45.0%
! AGGAGGAGTTTGAAGGGTTT+TGG - chr1_4:61934308-61934327 None:intergenic 45.0%
GTATTGGAGGAGGAGTTTGA+AGG - chr1_4:61934315-61934334 None:intergenic 45.0%
AAAGAATGGAGAGCTATGGG+AGG - chr1_4:61934405-61934424 None:intergenic 45.0%
!!! CTCTGTTTGGGAGTTTTGAG+GGG - chr1_4:61934469-61934488 None:intergenic 45.0%
!! GCTCTGTTTGGGAGTTTTGA+GGG - chr1_4:61934470-61934489 None:intergenic 45.0%
TAGATACCTGCTTGCAGCTT+TGG + chr1_4:61934599-61934618 Msa0175810:intron 45.0%
AACAAACCAAAGCTGCAAGC+AGG - chr1_4:61934608-61934627 None:intergenic 45.0%
TACAGTCTCTATGGGGTATG+AGG - chr1_4:61934792-61934811 None:intergenic 45.0%
CAACAATGTGGCTGTCAAAG+AGG + chr1_4:61934919-61934938 Msa0175810:intron 45.0%
! CTCGATCCAGTGATTTTGAG+CGG - chr1_4:61935508-61935527 None:intergenic 45.0%
TCGAGATTCATACAACTCCG+GGG + chr1_4:61935523-61935542 Msa0175810:CDS 45.0%
ATTCATACAACTCCGGGGAT+TGG + chr1_4:61935528-61935547 Msa0175810:CDS 45.0%
ATACCTGTTGAACCAATCCC+CGG - chr1_4:61935543-61935562 None:intergenic 45.0%
AAGACCAACACCCCAGTTAT+TGG - chr1_4:61935781-61935800 None:intergenic 45.0%
GCTAGGATGTCAATCCTTTG+AGG - chr1_4:61936225-61936244 None:intergenic 45.0%
ATGGTCATGATGGCTTTCCT+GGG + chr1_4:61936666-61936685 Msa0175810:CDS 45.0%
TCTTCAATTGCATCCCGTTC+AGG + chr1_4:61936869-61936888 Msa0175810:CDS 45.0%
CTACAACACAGTACACACCA+TGG - chr1_4:61936962-61936981 None:intergenic 45.0%
CATGGTGTGTACTGTGTTGT+AGG + chr1_4:61936960-61936979 Msa0175810:intron 45.0%
!! TGAATGCTTTGTTTCGGGTG+TGG + chr1_4:61937101-61937120 Msa0175810:three_prime_UTR 45.0%
!!! GTTTTGAGGTGTGACTGTGA+AGG - chr1_4:61937205-61937224 None:intergenic 45.0%
!!! TCTTTTATTAAAAAAAAAAT+TGG - chr1_4:61930715-61930734 None:intergenic 5.0%
AGTGAAGGACGAGGGAATGA+TGG - chr1_4:61925582-61925601 None:intergenic 50.0%
! GAAGGTACAGTGAAGGACGA+GGG - chr1_4:61925590-61925609 None:intergenic 50.0%
AAACATGATGGCCCAGATGC+AGG + chr1_4:61925803-61925822 Msa0175810:intron 50.0%
AAGCTGGAAGAGGATAAGGC+TGG + chr1_4:61926418-61926437 Msa0175810:CDS 50.0%
GCTCAGCTGATGAGAAATGC+AGG + chr1_4:61927398-61927417 Msa0175810:intron 50.0%
GAGAAATGCAGGGACTGTAC+TGG + chr1_4:61927409-61927428 Msa0175810:CDS 50.0%
! TCTGAGAAAAGTGCACCGAG+TGG - chr1_4:61927481-61927500 None:intergenic 50.0%
!!! ACTCGGTGCACTTTTCTCAG+AGG + chr1_4:61927480-61927499 Msa0175810:CDS 50.0%
GTTCCTCTTGAGGAGGAACA+CGG + chr1_4:61927702-61927721 Msa0175810:CDS 50.0%
TTGAGGAGGAACACGGTGTT+TGG + chr1_4:61927709-61927728 Msa0175810:CDS 50.0%
!! TTTTCAACCCGCGAAGTGCT+CGG - chr1_4:61927798-61927817 None:intergenic 50.0%
! GCCAGATTTTCCCATCCATC+AGG - chr1_4:61928039-61928058 None:intergenic 50.0%
AGGCTGCACAGAGAGATCAT+TGG - chr1_4:61928501-61928520 None:intergenic 50.0%
TCTGTGCAGCCTGAATTTCG+CGG + chr1_4:61928509-61928528 Msa0175810:CDS 50.0%
TAGGGACACCCCAAAGAACA+GGG - chr1_4:61929427-61929446 None:intergenic 50.0%
TTAGGGACACCCCAAAGAAC+AGG - chr1_4:61929428-61929447 None:intergenic 50.0%
!! GTTCTTTGGGGTGTCCCTAA+AGG + chr1_4:61929428-61929447 Msa0175810:CDS 50.0%
!! TACTGGCCTTCGTGTTGTGT+TGG + chr1_4:61929675-61929694 Msa0175810:CDS 50.0%
! AACCATAGAGTGCTCACTCG+CGG - chr1_4:61929975-61929994 None:intergenic 50.0%
CCCAGTGTACAAGATCATCG+AGG - chr1_4:61930009-61930028 None:intergenic 50.0%
! GGTTGGTCATAACCTGGCTA+AGG + chr1_4:61930836-61930855 Msa0175810:intron 50.0%
TGGTCATAACCTGGCTAAGG+TGG + chr1_4:61930839-61930858 Msa0175810:intron 50.0%
TGTATATGGCCACCTTAGCC+AGG - chr1_4:61930851-61930870 None:intergenic 50.0%
GAAGTTGCCAAAAATGGGCG+TGG + chr1_4:61931239-61931258 Msa0175810:CDS 50.0%
CGAATTCGTGATTCCGTGCT+TGG + chr1_4:61931610-61931629 Msa0175810:CDS 50.0%
ATTCGTGATTCCGTGCTTGG+TGG + chr1_4:61931613-61931632 Msa0175810:CDS 50.0%
! GTGCTTGGTGGATCTCCATT+TGG + chr1_4:61931625-61931644 Msa0175810:CDS 50.0%
TGTTGAAGAGGGTGGCCAAA+TGG - chr1_4:61931643-61931662 None:intergenic 50.0%
ATTTGGCCACCCTCTTCAAC+AGG + chr1_4:61931642-61931661 Msa0175810:CDS 50.0%
TTTGGCCACCCTCTTCAACA+GGG + chr1_4:61931643-61931662 Msa0175810:CDS 50.0%
CAAAACCCTGTTGAAGAGGG+TGG - chr1_4:61931651-61931670 None:intergenic 50.0%
AAGCTTGAGAAGGGAGGAGA+AGG - chr1_4:61931731-61931750 None:intergenic 50.0%
AACCAACTCCCAAGGACAAG+AGG + chr1_4:61932875-61932894 Msa0175810:CDS 50.0%
TACCTCTTGTCCTTGGGAGT+TGG - chr1_4:61932880-61932899 None:intergenic 50.0%
GTTGTTGGGGAAGTAGCTGA+TGG + chr1_4:61933158-61933177 Msa0175810:intron 50.0%
GGGAAGTAGCTGATGGAAAC+TGG + chr1_4:61933165-61933184 Msa0175810:intron 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - chr1_4:61933272-61933291 None:intergenic 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + chr1_4:61933269-61933288 Msa0175810:intron 50.0%
AAGTAACCCACAACAGCCTG+TGG + chr1_4:61933327-61933346 Msa0175810:intron 50.0%
GAATTGTGGGCTCTGCAATG+TGG + chr1_4:61933533-61933552 Msa0175810:intron 50.0%
! CTTGAGTTTGTAGTGGAGGG+CGG + chr1_4:61933581-61933600 Msa0175810:intron 50.0%
GGAGCATGGACATATACAGG+TGG - chr1_4:61933881-61933900 None:intergenic 50.0%
! GTATTGACGGTAGCTGATGC+TGG + chr1_4:61933917-61933936 Msa0175810:intron 50.0%
! AGTACAGGTGGTAGCGATGA+TGG + chr1_4:61934015-61934034 Msa0175810:CDS 50.0%
GCTCTGTTTGTGGGTTTGGA+GGG + chr1_4:61934145-61934164 Msa0175810:intron 50.0%
CTCTGTTTGTGGGTTTGGAG+GGG + chr1_4:61934146-61934165 Msa0175810:intron 50.0%
TTTGTGGGTTTGGAGGGGTA+GGG + chr1_4:61934151-61934170 Msa0175810:intron 50.0%
!!! GAGTTTTGAGGGGAGGAGAA+GGG - chr1_4:61934459-61934478 None:intergenic 50.0%
!!! TGTTTGGGAGTTTTGAGGGG+AGG - chr1_4:61934466-61934485 None:intergenic 50.0%
! GGCTCTGTTTGGGAGTTTTG+AGG - chr1_4:61934471-61934490 None:intergenic 50.0%
ACAGCTAGGAAGTTTGGACC+AGG + chr1_4:61934504-61934523 Msa0175810:intron 50.0%
GGGTATGAGGCAAATGCAAC+GGG - chr1_4:61934779-61934798 None:intergenic 50.0%
GGGGTATGAGGCAAATGCAA+CGG - chr1_4:61934780-61934799 None:intergenic 50.0%
TCAGCCACACTGATATCCGA+CGG - chr1_4:61935149-61935168 None:intergenic 50.0%
!! TCCTTTGAGGCCTGAAGGAT+GGG - chr1_4:61936212-61936231 None:intergenic 50.0%
!! ATCCTTTGAGGCCTGAAGGA+TGG - chr1_4:61936213-61936232 None:intergenic 50.0%
!! GTCAATCCTTTGAGGCCTGA+AGG - chr1_4:61936217-61936236 None:intergenic 50.0%
GTATAGCATTTGCCGTCCTC+AGG - chr1_4:61936305-61936324 None:intergenic 50.0%
GAGGACGGCAAATGCTATAC+AGG + chr1_4:61936305-61936324 Msa0175810:CDS 50.0%
CGAGTACGCTTTCACAACAC+TGG + chr1_4:61936602-61936621 Msa0175810:CDS 50.0%
ATGACTCCAGAAACCAGCGA+TGG - chr1_4:61936629-61936648 None:intergenic 50.0%
GATGGTCATGATGGCTTTCC+TGG + chr1_4:61936665-61936684 Msa0175810:CDS 50.0%
! GGAAGGTACAGTGAAGGACG+AGG - chr1_4:61925591-61925610 None:intergenic 55.0%
ACACCGTGTTCCTCCTCAAG+AGG - chr1_4:61927708-61927727 None:intergenic 55.0%
TATACCACCCGAGCACTTCG+CGG + chr1_4:61927787-61927806 Msa0175810:CDS 55.0%
! TTTCAACCCGCGAAGTGCTC+GGG - chr1_4:61927797-61927816 None:intergenic 55.0%
GCAGACTTTCATCAGACGGC+AGG + chr1_4:61927974-61927993 Msa0175810:intron 55.0%
GACTTTCATCAGACGGCAGG+CGG + chr1_4:61927977-61927996 Msa0175810:intron 55.0%
TACCGCGAGTGAGCACTCTA+TGG + chr1_4:61929970-61929989 Msa0175810:CDS 55.0%
GAGAAGGGAGGAGAAGGAGT+AGG - chr1_4:61931725-61931744 None:intergenic 55.0%
GGGAAACCACAGGCTGTTGT+GGG - chr1_4:61933336-61933355 None:intergenic 55.0%
AGGGAAACCACAGGCTGTTG+TGG - chr1_4:61933337-61933356 None:intergenic 55.0%
! ACGGTAGCTGATGCTGGTTG+AGG + chr1_4:61933923-61933942 Msa0175810:intron 55.0%
! ACAGGTGGTAGCGATGATGG+CGG + chr1_4:61934018-61934037 Msa0175810:CDS 55.0%
!! GATGATGGCGGAGTCAGATG+TGG + chr1_4:61934030-61934049 Msa0175810:intron 55.0%
GGCTCTGTTTGTGGGTTTGG+AGG + chr1_4:61934144-61934163 Msa0175810:intron 55.0%
GTTTGTGGGTTTGGAGGGGT+AGG + chr1_4:61934150-61934169 Msa0175810:intron 55.0%
! ATGGGAGGCAAGGGCTTTGA+GGG - chr1_4:61934390-61934409 None:intergenic 55.0%
TATGGGAGGCAAGGGCTTTG+AGG - chr1_4:61934391-61934410 None:intergenic 55.0%
TGGAGAGCTATGGGAGGCAA+GGG - chr1_4:61934399-61934418 None:intergenic 55.0%
ATGGAGAGCTATGGGAGGCA+AGG - chr1_4:61934400-61934419 None:intergenic 55.0%
TTTGAGGGGAGGAGAAGGGA+GGG - chr1_4:61934455-61934474 None:intergenic 55.0%
!! TTTTGAGGGGAGGAGAAGGG+AGG - chr1_4:61934456-61934475 None:intergenic 55.0%
!!! GGAGTTTTGAGGGGAGGAGA+AGG - chr1_4:61934460-61934479 None:intergenic 55.0%
TGGGGCCAGGGGATATACTA+TGG - chr1_4:61934823-61934842 None:intergenic 55.0%
AAGTGGAAAAGTGGGGCCAG+GGG - chr1_4:61934834-61934853 None:intergenic 55.0%
GAAGTGGAAAAGTGGGGCCA+GGG - chr1_4:61934835-61934854 None:intergenic 55.0%
AGAAGTGGAAAAGTGGGGCC+AGG - chr1_4:61934836-61934855 None:intergenic 55.0%
GACTCCGTCGGATATCAGTG+TGG + chr1_4:61935142-61935161 Msa0175810:intron 55.0%
TCAGTGTGGCTGAGAGATGC+AGG + chr1_4:61935156-61935175 Msa0175810:CDS 55.0%
!! ACTCCGGGGATTGGTTCAAC+AGG + chr1_4:61935537-61935556 Msa0175810:CDS 55.0%
! GGTAAGTCGGTGTCCTAGTG+TGG - chr1_4:61936033-61936052 None:intergenic 55.0%
AAGGATGGGTCTGCCAGTCT+TGG - chr1_4:61936198-61936217 None:intergenic 55.0%
ACCCATCCTTCAGGCCTCAA+AGG + chr1_4:61936208-61936227 Msa0175810:CDS 55.0%
!! CTTCACCACTTTTCCGCCTG+AGG + chr1_4:61936286-61936305 Msa0175810:CDS 55.0%
!! ACCACTTTTCCGCCTGAGGA+CGG + chr1_4:61936290-61936309 Msa0175810:CDS 55.0%
TAGCATTTGCCGTCCTCAGG+CGG - chr1_4:61936302-61936321 None:intergenic 55.0%
TCACAACACTGGACCATCGC+TGG + chr1_4:61936613-61936632 Msa0175810:CDS 55.0%
!! ACTGGACCATCGCTGGTTTC+TGG + chr1_4:61936620-61936639 Msa0175810:CDS 55.0%
CTTTCCTGGGTTGTCTCAGC+TGG + chr1_4:61936679-61936698 Msa0175810:CDS 55.0%
ATACCACCCGAGCACTTCGC+GGG + chr1_4:61927788-61927807 Msa0175810:CDS 60.0%
GTGCAGCCTGAATTTCGCGG+TGG + chr1_4:61928512-61928531 Msa0175810:CDS 60.0%
GGGCTCTGCAATGTGGAGAG+TGG + chr1_4:61933540-61933559 Msa0175810:intron 60.0%
! TTTGTAGTGGAGGGCGGCTG+TGG + chr1_4:61933587-61933606 Msa0175810:intron 60.0%
TGGGTTTGGAGGGGTAGGGA+AGG + chr1_4:61934155-61934174 Msa0175810:intron 60.0%
GGGTTTGGAGGGGTAGGGAA+GGG + chr1_4:61934156-61934175 Msa0175810:intron 60.0%
!! TGGGAGGCAAGGGCTTTGAG+GGG - chr1_4:61934389-61934408 None:intergenic 60.0%
!! GGGTGTTGGTCTTCCTCCAC+AGG + chr1_4:61935788-61935807 Msa0175810:CDS 60.0%
GACTGGCAGACCCATCCTTC+AGG + chr1_4:61936199-61936218 Msa0175810:CDS 60.0%
GGATCCAGCTGAGACAACCC+AGG - chr1_4:61936686-61936705 None:intergenic 60.0%
CAGCTGTGTTCGTCGAGCCA+AGG + chr1_4:61937061-61937080 Msa0175810:CDS 60.0%
TAGTGGAGGGCGGCTGTGGT+TGG + chr1_4:61933591-61933610 Msa0175810:intron 65.0%
!! GGGAGGCAAGGGCTTTGAGG+GGG - chr1_4:61934388-61934407 None:intergenic 65.0%
GCCGTCCTCAGGCGGAAAAG+TGG - chr1_4:61936294-61936313 None:intergenic 65.0%
! CAACCCGCGAAGTGCTCGGG+TGG - chr1_4:61927794-61927813 None:intergenic 70.0%
GAGGGCGGCTGTGGTTGGCG+TGG + chr1_4:61933596-61933615 Msa0175810:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 61925501 61937268 61925501 ID=Msa0175810;Name=Msa0175810
chr1_4 mRNA 61925501 61937268 61925501 ID=Msa0175810-mRNA-1;Parent=Msa0175810;Name=Msa0175810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=12|0.92|0.96|0.96|1|1|29|176|986
chr1_4 exon 61925501 61925719 61925501 ID=Msa0175810-mRNA-1:exon:19822;Parent=Msa0175810-mRNA-1
chr1_4 exon 61925819 61925966 61925819 ID=Msa0175810-mRNA-1:exon:19823;Parent=Msa0175810-mRNA-1
chr1_4 exon 61926401 61926453 61926401 ID=Msa0175810-mRNA-1:exon:19824;Parent=Msa0175810-mRNA-1
chr1_4 exon 61927013 61927121 61927013 ID=Msa0175810-mRNA-1:exon:19825;Parent=Msa0175810-mRNA-1
chr1_4 exon 61927404 61927540 61927404 ID=Msa0175810-mRNA-1:exon:19826;Parent=Msa0175810-mRNA-1
chr1_4 exon 61927648 61927847 61927648 ID=Msa0175810-mRNA-1:exon:19827;Parent=Msa0175810-mRNA-1
chr1_4 exon 61927978 61928127 61927978 ID=Msa0175810-mRNA-1:exon:19828;Parent=Msa0175810-mRNA-1
chr1_4 exon 61928496 61928556 61928496 ID=Msa0175810-mRNA-1:exon:19829;Parent=Msa0175810-mRNA-1
chr1_4 exon 61928715 61928835 61928715 ID=Msa0175810-mRNA-1:exon:19830;Parent=Msa0175810-mRNA-1
chr1_4 exon 61929245 61929335 61929245 ID=Msa0175810-mRNA-1:exon:19831;Parent=Msa0175810-mRNA-1
chr1_4 exon 61929418 61929511 61929418 ID=Msa0175810-mRNA-1:exon:19832;Parent=Msa0175810-mRNA-1
chr1_4 exon 61929664 61929759 61929664 ID=Msa0175810-mRNA-1:exon:19833;Parent=Msa0175810-mRNA-1
chr1_4 exon 61929902 61930042 61929902 ID=Msa0175810-mRNA-1:exon:19834;Parent=Msa0175810-mRNA-1
chr1_4 exon 61930469 61930519 61930469 ID=Msa0175810-mRNA-1:exon:19835;Parent=Msa0175810-mRNA-1
chr1_4 exon 61931006 61931076 61931006 ID=Msa0175810-mRNA-1:exon:19836;Parent=Msa0175810-mRNA-1
chr1_4 exon 61931214 61931306 61931214 ID=Msa0175810-mRNA-1:exon:19837;Parent=Msa0175810-mRNA-1
chr1_4 exon 61931600 61931690 61931600 ID=Msa0175810-mRNA-1:exon:19838;Parent=Msa0175810-mRNA-1
chr1_4 exon 61932053 61932124 61932053 ID=Msa0175810-mRNA-1:exon:19839;Parent=Msa0175810-mRNA-1
chr1_4 exon 61932840 61932896 61932840 ID=Msa0175810-mRNA-1:exon:19840;Parent=Msa0175810-mRNA-1
chr1_4 exon 61933952 61934041 61933952 ID=Msa0175810-mRNA-1:exon:19841;Parent=Msa0175810-mRNA-1
chr1_4 exon 61934740 61934808 61934740 ID=Msa0175810-mRNA-1:exon:19842;Parent=Msa0175810-mRNA-1
chr1_4 exon 61934982 61935038 61934982 ID=Msa0175810-mRNA-1:exon:19843;Parent=Msa0175810-mRNA-1
chr1_4 exon 61935143 61935217 61935143 ID=Msa0175810-mRNA-1:exon:19844;Parent=Msa0175810-mRNA-1
chr1_4 exon 61935470 61935558 61935470 ID=Msa0175810-mRNA-1:exon:19845;Parent=Msa0175810-mRNA-1
chr1_4 exon 61935758 61935835 61935758 ID=Msa0175810-mRNA-1:exon:19846;Parent=Msa0175810-mRNA-1
chr1_4 exon 61936188 61936326 61936188 ID=Msa0175810-mRNA-1:exon:19847;Parent=Msa0175810-mRNA-1
chr1_4 exon 61936599 61936708 61936599 ID=Msa0175810-mRNA-1:exon:19848;Parent=Msa0175810-mRNA-1
chr1_4 exon 61936791 61936890 61936791 ID=Msa0175810-mRNA-1:exon:19849;Parent=Msa0175810-mRNA-1
chr1_4 exon 61936982 61937268 61936982 ID=Msa0175810-mRNA-1:exon:19850;Parent=Msa0175810-mRNA-1
chr1_4 five_prime_UTR 61925501 61925512 61925501 ID=Msa0175810-mRNA-1:five_prime_utr;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61925513 61925719 61925513 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61925819 61925966 61925819 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61926401 61926453 61926401 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61927013 61927121 61927013 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61927404 61927540 61927404 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61927648 61927847 61927648 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61927978 61928127 61927978 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61928496 61928556 61928496 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61928715 61928835 61928715 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61929245 61929335 61929245 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61929418 61929511 61929418 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61929664 61929759 61929664 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61929902 61930042 61929902 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61930469 61930519 61930469 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61931006 61931076 61931006 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61931214 61931306 61931214 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61931600 61931690 61931600 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61932053 61932124 61932053 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61932840 61932896 61932840 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61933952 61934041 61933952 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61934740 61934808 61934740 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61934982 61935038 61934982 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61935143 61935217 61935143 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61935470 61935558 61935470 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61935758 61935835 61935758 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61936188 61936326 61936188 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61936599 61936708 61936599 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61936791 61936890 61936791 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 CDS 61936982 61937092 61936982 ID=Msa0175810-mRNA-1:cds;Parent=Msa0175810-mRNA-1
chr1_4 three_prime_UTR 61937093 61937268 61937093 ID=Msa0175810-mRNA-1:three_prime_utr;Parent=Msa0175810-mRNA-1
Gene Sequence

>Msa0175810

ATGCTTCGTTTAACATCATCACCATTTTCACTTTCTTTCCCTTCAATTTCCAACCTCAATCTTCTTCCATCATTCCCTCGTCCTTCACTGTACCTTCCTTCTTCATCTACTACTTTCCACACTACTTCACTTCGCATTCACACCCCACCACCTCTTTCTTCTTCTCTTTCTTCTTCCTCTGTCGATCAAACTACTTCCATTTCTCAGATGCAGGATAATTTGTTATTGTACTCAAGAGCTTATTGGGTCACTCAATCTCTTATTGCTTGGAATGTTGATCATCATCAAAATGGGGTTTGTTACCTACTTTCCAGCAAAGATGCTTCTTTGAACATTTCTAATTCTCAAATTCAAGGTGAGGATTTGAAAATTAAGCTGGAAGAGGATAAGGCTGGCCTTCCTGCAAATGTGGTGGAGAAATTTCCACACATTCGAGGTTACAAAGCTTTCAATCTGCCTTCCAGTTCAGATATTAGTTCTCTTCTTAAATCCCAGTTGGCGGTTGTTATTTATGATTCTGATGAGAAATGCAGGGACTGTACTGGTTTGCAGTTACCTGGTGTTTTAGATGAGCTTTTTTCATATAATGGTCCACTCGGTGCACTTTTCTCAGAGGAAGCTGTATCACTTTACTTGTGGGCGCCTACCGCTCAATCGGTGCGTGCTTACATCTATAAGCACCCATCAGGAGATGATCCCATAGAAATTGTTCCTCTTGAGGAGGAACACGGTGTTTGGAGAACTAAAGGGCCAAAAAATTGGGAGAGTTGTTACTATGTTTATGAAGTATGTGTATACCACCCGAGCACTTCGCGGGTTGAAAAATGCTACGCTAATGATCCATATGCTAGAGGACTTTCATCAGACGGCAGGCGGACTTTTCTGCTTAATCTTGACTCCGATGAGTTGAAACCTGATGGATGGGAAAATCTGGCAAATGAGAAACCCATTTTACATTCTTTCTCAGATATAAGCATTTATGAATTGCATATAAGGGATTTCAGTGCCAATGATCTCTCTGTGCAGCCTGAATTTCGCGGTGGTTATCTTGCCTTTACTTTGATGGATTCAGCAGGTGCACTTCATCTAAAGAAATTATCAAGTGCGGGTATCACCCATGTCCATCTATTGCCAACATTTCAATTTGCTGGGGTTGATGATCAAAAGGAGAACTGGAGAAATGTTGATACGTCGGTACTGGAAAGCTTTCCACCTGATTCAGATCAGCAACAAGCTCTTATTACAGCCATCCAAAACTTTGATGGATATAACTGGGGGTACAACCCTGTTCTTTGGGGTGTCCCTAAAGGCAGCTATGCAAGTAATCCAAATGGTCCAAACCGTACAATTGAGTTTCGTAAGATGGTTCAGGCTCTTAGTCATACTGGCCTTCGTGTTGTGTTGGATACTGTCTACAATCATTTGCAGGGAAATGGGCCCTTTGATGAACATTCTGTCCTTGATAAGATTGTTCCAGGTTACTATCTAAGAAGGAACACAGATGGTTTCATTGAGAACAGTACTTGTATGAATAATACCGCGAGTGAGCACTCTATGGTTGAGCGTTTGATCCTCGATGATCTTGTACACTGGGCAGTCAATTATAAGATTGATGGGTTCAGATTTGACCTTATGGGTCATATAATGAAGAGTACAATGGTGAAAGCAAAAAATGCTCTCCAACGTTTAACAAAAGAAAAGGATGGAGTTGATGGTTCAAGCATCTACATATATGGTGAAGGATGGGACTTTGGTGAAGTTGCCAAAAATGGGCGTGGGATAAACGCTTCTCAGTTCAATCTTGCTGGAACACAAATTGGGAGCTTTAACGATCGAATTCGTGATTCCGTGCTTGGTGGATCTCCATTTGGCCACCCTCTTCAACAGGGTTTTGTGACTGGTCTACTTTTGCAGCCTAATGGCTATGATCATGGAACAGAAGCTAATATGAAATCCATGCTTTCTGCATCAATGGATCACATCCAGATTGGAATGGCTGGAAACTTGAAAGATTTTGTACTAACCAACTCCCAAGGACAAGAGAGAAGAGTGGCAGCAATGGCAGTAGTAGATAAATGGAGAGGTGGAAGTTATGACAAAGTTGTAAGTACAGGTGGTAGCGATGATGGCGGAGTGAAAGGGTCGGAAGTATTAACATATGGTGGGACACCCGTTGCATTTGCCTCATACCCCATAGAGACTGTCAATTATGTTTCTGCTCATGATAATGAAACCCTCTTTGACATTGTGAGCTTAAAGACTCCGTCGGATATCAGTGTGGCTGAGAGATGCAGGATAAACCATTTGGCAACAAGTGTTATAGCATTATCACAGGGCATACCATTTTTTCACTCTGGTGATGAGATACTCCGCTCAAAATCACTGGATCGAGATTCATACAACTCCGGGGATTGGTTCAACAGGCTTGACTTTACATACAATTCCAATAACTGGGGTGTTGGTCTTCCTCCACAGGAGAAAAATGAAAAACACTGGTCACTAATGAAACCAAGACTGGCAGACCCATCCTTCAGGCCTCAAAGGATTGACATCCTAGCTACAATGGACAATTTCTTAAACCTGTTGCGTATAAGGTATTCTTCACCACTTTTCCGCCTGAGGACGGCAAATGCTATACAGCAACGAGTACGCTTTCACAACACTGGACCATCGCTGGTTTCTGGAGTCATAGTGATGAGCATTGAAGATGGTCATGATGGCTTTCCTGGGTTGTCTCAGCTGGATCCCATATATTCGTTCATTGTTGTCGTTTTCAACGCGAGTCCACAAGAAATATCATTTGTTAGCCCTTCCCTGCAATCAAGAAATCTTCAATTGCATCCCGTTCAGGAAATGTCATCTGATGAGCTTGTTAAGAGTTCAAAATATGAGGCTTCTTCTGGTTGTTTTGTTGTGTCTCGAAGGACGACAGCTGTGTTCGTCGAGCCAAGGAAAATGTAA
Protein sequence

>Msa0175810

MLRLTSSPFSLSFPSISNLNLLPSFPRPSLYLPSSSTTFHTTSLRIHTPPPLSSSLSSSSVDQTTSISQMQDNLLLYSRAYWVTQSLIAWNVDHHQNGVCYLLSSKDASLNISNSQIQGEDLKIKLEEDKAGLPANVVEKFPHIRGYKAFNLPSSSDISSLLKSQLAVVIYDSDEKCRDCTGLQLPGVLDELFSYNGPLGALFSEEAVSLYLWAPTAQSVRAYIYKHPSGDDPIEIVPLEEEHGVWRTKGPKNWESCYYVYEVCVYHPSTSRVEKCYANDPYARGLSSDGRRTFLLNLDSDELKPDGWENLANEKPILHSFSDISIYELHIRDFSANDLSVQPEFRGGYLAFTLMDSAGALHLKKLSSAGITHVHLLPTFQFAGVDDQKENWRNVDTSVLESFPPDSDQQQALITAIQNFDGYNWGYNPVLWGVPKGSYASNPNGPNRTIEFRKMVQALSHTGLRVVLDTVYNHLQGNGPFDEHSVLDKIVPGYYLRRNTDGFIENSTCMNNTASEHSMVERLILDDLVHWAVNYKIDGFRFDLMGHIMKSTMVKAKNALQRLTKEKDGVDGSSIYIYGEGWDFGEVAKNGRGINASQFNLAGTQIGSFNDRIRDSVLGGSPFGHPLQQGFVTGLLLQPNGYDHGTEANMKSMLSASMDHIQIGMAGNLKDFVLTNSQGQERRVAAMAVVDKWRGGSYDKVVSTGGSDDGGVKGSEVLTYGGTPVAFASYPIETVNYVSAHDNETLFDIVSLKTPSDISVAERCRINHLATSVIALSQGIPFFHSGDEILRSKSLDRDSYNSGDWFNRLDFTYNSNNWGVGLPPQEKNEKHWSLMKPRLADPSFRPQRIDILATMDNFLNLLRIRYSSPLFRLRTANAIQQRVRFHNTGPSLVSGVIVMSIEDGHDGFPGLSQLDPIYSFIVVVFNASPQEISFVSPSLQSRNLQLHPVQEMSSDELVKSSKYEASSGCFVVSRRTTAVFVEPRKM*