AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0605250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0605250 MtrunA17_Chr4g0034481 96.350 548 19 1 1 547 1 548 0.0 1090
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0605250 AT1G49380.1 67.093 547 164 4 11 548 5 544 0.0 758

Find 142 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACACCATAAGGACCTTTC+TGG 0.163357 4_2:+51033251 None:intergenic
CTTGCAATGTTGGCCCTTCT+TGG 0.176283 4_2:-51032240 Msa0605250:CDS
TGAATAGTATCTTTGCTATT+TGG 0.190042 4_2:-51029514 Msa0605250:three_prime_UTR
GACATTAGAGCTTTGGTATC+TGG 0.206322 4_2:+51029550 None:intergenic
GATGATGATTCAACTATTTC+AGG 0.215636 4_2:+51029840 None:intergenic
TCTAATTTGCCTTTGGCTAT+TGG 0.216573 4_2:-51033193 Msa0605250:CDS
CAGAGCTAAGTTAGAGTTTC+CGG 0.217680 4_2:-51029892 Msa0605250:CDS
TTCTGGTTCTTTGAGCTTGC+TGG 0.229099 4_2:+51033268 None:intergenic
AATGGAGATAAGAAACTTTA+TGG 0.238655 4_2:-51031170 Msa0605250:CDS
GTTAACTCTCCTGATGTTAA+AGG 0.262581 4_2:-51031125 Msa0605250:CDS
CAACTGCAAACTGTACATTA+TGG 0.274979 4_2:+51029486 None:intergenic
TTATCTCCATTGATCTTTAG+AGG 0.290427 4_2:+51031182 None:intergenic
CGACATACAAACATACAAAT+TGG 0.290587 4_2:-51029688 Msa0605250:three_prime_UTR
GATGATCTTCAGGGTAATTC+TGG 0.298793 4_2:+51032337 None:intergenic
CCTAACACAGGATGATCTTC+AGG 0.304432 4_2:+51032327 None:intergenic
ATTGGATGGGAGCATATATA+TGG 0.304891 4_2:-51029736 Msa0605250:three_prime_UTR
GTGATACCATCATATCTTAA+AGG 0.306162 4_2:+51031284 None:intergenic
AAGATGATCTGCAAAAGTTT+TGG 0.309305 4_2:+51029644 None:intergenic
ATTTCCCTTCCTTATCATAA+AGG 0.309945 4_2:+51030484 None:intergenic
ACTCCAATCCGTCTGGTATA+TGG 0.313882 4_2:+51031262 None:intergenic
TTGAGAAGACATTGATTCAT+AGG 0.322099 4_2:+51033484 None:intergenic
AGACGTCGGTACTATATTAA+TGG 0.326408 4_2:-51031997 Msa0605250:CDS
CCTGAAGATCATCCTGTGTT+AGG 0.327344 4_2:-51032327 Msa0605250:CDS
CACTCATCAAGATTTCAAAA+AGG 0.332336 4_2:-51032179 Msa0605250:intron
GATTCTCTCTAATTTGCCTT+TGG 0.333030 4_2:-51033200 Msa0605250:CDS
TCACGTCAACAGATTCTCTA+TGG 0.334482 4_2:-51031574 Msa0605250:CDS
CAGTTTCAGTTTCCAGTTTG+AGG 0.335650 4_2:+51033550 None:intergenic
GATGGAACAACAGTCGTTAT+TGG 0.338022 4_2:-51029927 Msa0605250:CDS
GATAAGGAAGGGAAATTTGC+AGG 0.341411 4_2:-51030477 Msa0605250:CDS
TTGTGTAAGTGCAGGCTATA+AGG 0.342045 4_2:+51032211 None:intergenic
TATAGCACTGCTGTTGATAA+TGG 0.346092 4_2:-51031733 Msa0605250:CDS
TTGATTGGGAGCTTTGAATT+AGG 0.356379 4_2:+51030444 None:intergenic
GTCAATTGTCCTTTATGATA+AGG 0.380317 4_2:-51030493 Msa0605250:CDS
AGGTTCAGTCACTGTGCCTC+AGG 0.385654 4_2:-51031676 Msa0605250:CDS
TCTGAGCCGTCAATGTTGAT+TGG 0.394000 4_2:+51030429 None:intergenic
ACCTATATTTCTTGCAATGT+TGG 0.395976 4_2:-51032250 Msa0605250:CDS
CTGAGCCGTCAATGTTGATT+GGG 0.396472 4_2:+51030430 None:intergenic
AGTTTCAGTTTCCAGTTTGA+GGG 0.403729 4_2:+51033551 None:intergenic
GGTCAAGAAGTTGAGTAAAA+AGG 0.404743 4_2:-51033230 Msa0605250:CDS
CAGTAGTGGCTTGGACTTGA+AGG 0.414087 4_2:-51030382 Msa0605250:intron
GATACAAGACATTAGAGCTT+TGG 0.414264 4_2:+51029543 None:intergenic
ACACACACAGTCCCTCAAAC+TGG 0.417801 4_2:-51033562 Msa0605250:five_prime_UTR
GAATTAAAAGACTCTTCAAT+TGG 0.421415 4_2:-51029754 Msa0605250:three_prime_UTR
AAAACTCAGGTTTCTCGCCT+TGG 0.423189 4_2:+51032364 None:intergenic
GGTGCCATAGCCAAGTTATA+AGG 0.424092 4_2:+51031203 None:intergenic
AAGAACCAGAAAGGTCCTTA+TGG 0.425770 4_2:-51033256 Msa0605250:CDS
AGTGCTATATGAACGCCAAC+AGG 0.426144 4_2:+51031747 None:intergenic
TTCTCCTGTGTGAGTGGTGG+TGG 0.428072 4_2:+51033316 None:intergenic
GACTGTTGTTCCATCTTGTA+AGG 0.430467 4_2:+51029935 None:intergenic
TAAAAGACTCTTCAATTGGA+TGG 0.439767 4_2:-51029750 Msa0605250:three_prime_UTR
TGATACCATCATATCTTAAA+GGG 0.444057 4_2:+51031285 None:intergenic
CCAGTTGTATATGCTGGATT+TGG 0.446587 4_2:-51030249 Msa0605250:CDS
ATTGTCGTTGTGGATGCAAT+AGG 0.449874 4_2:-51030405 Msa0605250:CDS
GCCAACATTGCAAGAAATAT+AGG 0.459699 4_2:+51032249 None:intergenic
GACGTCGGTACTATATTAAT+GGG 0.459990 4_2:-51031996 Msa0605250:CDS
AGCAAGAGGTTCATCTCGTC+CGG 0.469158 4_2:+51029873 None:intergenic
TGCAATAGGCAGTAGTGGCT+TGG 0.469467 4_2:-51030391 Msa0605250:CDS
GCCAACAGGGGCTAGCCGAC+CGG 0.474375 4_2:+51031761 None:intergenic
TCTGTATTAAATGCATCAGT+TGG 0.475064 4_2:+51031600 None:intergenic
ACTTACATTCCTTTAACATC+AGG 0.476122 4_2:+51031116 None:intergenic
AACTTCTTGACCACACCATA+AGG 0.476566 4_2:+51033241 None:intergenic
TTAATATAGTACCGACGTCT+TGG 0.478574 4_2:+51032000 None:intergenic
CGATCTTTCCCTCTTGAACA+TGG 0.481054 4_2:-51031348 Msa0605250:CDS
CTTTCCCTCTTGAACATGGA+TGG 0.481191 4_2:-51031344 Msa0605250:CDS
TTTGAACAAGGGATGAAAAG+TGG 0.482240 4_2:+51033456 None:intergenic
TCTATGGATTATTATGAAAG+TGG 0.483251 4_2:-51031558 Msa0605250:CDS
ATGATGATTCAACTATTTCA+GGG 0.487321 4_2:+51029841 None:intergenic
AACATACAAATTGGATGCGA+TGG 0.492806 4_2:-51029679 Msa0605250:three_prime_UTR
CCAAATCCAGCATATACAAC+TGG 0.494043 4_2:+51030249 None:intergenic
TTTGTTGTAGGAGATGTTCT+CGG 0.496044 4_2:-51031645 Msa0605250:CDS
GGAGGAACTTTAAGTGCGGC+AGG 0.496240 4_2:-51031708 Msa0605250:CDS
CTGAAATACTCCAATCCGTC+TGG 0.496597 4_2:+51031255 None:intergenic
TATGTTATGCAGACTGATCC+TGG 0.497099 4_2:-51030276 Msa0605250:intron
GCATATACAACTGGCACGCC+AGG 0.499803 4_2:+51030258 None:intergenic
CAGCTATTTATCTCATTCAC+AGG 0.500481 4_2:-51030202 Msa0605250:intron
CAATGAAGGACCTTATAACT+TGG 0.502844 4_2:-51031213 Msa0605250:CDS
GGAGATGTTCTCGGTCCTAC+CGG 0.507387 4_2:-51031636 Msa0605250:CDS
ATAGCACTGCTGTTGATAAT+GGG 0.512040 4_2:-51031732 Msa0605250:CDS
AAGCTCCCAATCAACATTGA+CGG 0.512647 4_2:-51030435 Msa0605250:CDS
AAAAGACTCTTCAATTGGAT+GGG 0.516739 4_2:-51029749 Msa0605250:three_prime_UTR
GGATTATAGGTATTCTTGAA+AGG 0.517238 4_2:-51031813 Msa0605250:intron
ATTAATGGGAGCTGGATATG+AGG 0.517838 4_2:-51031982 Msa0605250:intron
GCCGGTCGGCTAGCCCCTGT+TGG 0.520609 4_2:-51031762 Msa0605250:CDS
GGCGTGCCAGTTGTATATGC+TGG 0.520966 4_2:-51030255 Msa0605250:CDS
TGTGTAAGTGCAGGCTATAA+GGG 0.525342 4_2:+51032212 None:intergenic
ATTGTCCTTTATGATAAGGA+AGG 0.526577 4_2:-51030489 Msa0605250:CDS
CAAATTCTCAAGGACAATGA+AGG 0.527947 4_2:-51031227 Msa0605250:CDS
ATGGCACCTCTAAAGATCAA+TGG 0.528038 4_2:-51031188 Msa0605250:CDS
GGTACTATATTAATGGGAGC+TGG 0.536365 4_2:-51031990 Msa0605250:CDS
TCACCATATACCAGACGGAT+TGG 0.537124 4_2:-51031265 Msa0605250:CDS
TTCAGCTCTGCAAATTCTCA+AGG 0.537400 4_2:-51031237 Msa0605250:CDS
TGTGTCACATGATGTCTTTG+AGG 0.540282 4_2:-51033510 Msa0605250:CDS
AACGACCCTTTAAGATATGA+TGG 0.540927 4_2:-51031290 Msa0605250:CDS
GGTTCAGTCACTGTGCCTCA+GGG 0.545272 4_2:-51031675 Msa0605250:CDS
ACGTCTTGGATTGATGCTCT+TGG 0.547830 4_2:+51032014 None:intergenic
ATCTAAGAAAACTGATAGCA+TGG 0.552938 4_2:-51029814 Msa0605250:CDS
AAGATATGGGCCTTACAAGA+TGG 0.553885 4_2:-51029945 Msa0605250:CDS
GTCATTTATGCACTCTGCCG+AGG 0.555645 4_2:-51032069 Msa0605250:CDS
ATTAAATGCATCAGTTGGAA+AGG 0.556600 4_2:+51031605 None:intergenic
TTGAACAAGGGATGAAAAGT+GGG 0.557949 4_2:+51033457 None:intergenic
CTAACACAGGATGATCTTCA+GGG 0.561639 4_2:+51032328 None:intergenic
CTATAAGGGAAGCACCAAGA+AGG 0.562534 4_2:+51032226 None:intergenic
GGAGAGTTAACATCTCCAAC+CGG 0.566287 4_2:+51031137 None:intergenic
CCACGAAAAGCATACAAAGT+TGG 0.570654 4_2:+51031789 None:intergenic
CATAAAGGACAATTGACTGC+AGG 0.571577 4_2:+51030499 None:intergenic
CATGTTCAAGAGGGAAAGAT+CGG 0.573438 4_2:+51031349 None:intergenic
TTGTCCTTTATGATAAGGAA+GGG 0.575204 4_2:-51030488 Msa0605250:CDS
GCAAGCTCAAAGAACCAGAA+AGG 0.582871 4_2:-51033265 Msa0605250:CDS
TATAAGGGAAGCACCAAGAA+GGG 0.583272 4_2:+51032227 None:intergenic
AGTTCTGTTGAATTTGAACA+AGG 0.583852 4_2:+51033444 None:intergenic
TGGATGGAAAAGAAGTAATG+AGG 0.584497 4_2:-51031328 Msa0605250:CDS
GGAACAACAGTCGTTATTGG+AGG 0.585525 4_2:-51029924 Msa0605250:CDS
TCATCATTCTCCTGTGTGAG+TGG 0.588845 4_2:+51033310 None:intergenic
TTCTCCACCACCACTCACAC+AGG 0.595333 4_2:-51033320 Msa0605250:CDS
TGCAGTTGATGGTGAATGAG+AGG 0.596112 4_2:+51033404 None:intergenic
CTCTTGCTTACGTATAACCT+CGG 0.597641 4_2:+51032052 None:intergenic
GTGGATGCAATAGGCAGTAG+TGG 0.602202 4_2:-51030396 Msa0605250:CDS
GAGAATGATGATATCAACAA+TGG 0.605528 4_2:-51033298 Msa0605250:CDS
CGGCTCAGAAATTGTCGTTG+TGG 0.613524 4_2:-51030415 Msa0605250:CDS
AGTTGGAAAGGAAAGAAAGC+CGG 0.613737 4_2:+51031617 None:intergenic
AGGACCTTATAACTTGGCTA+TGG 0.614764 4_2:-51031207 Msa0605250:CDS
AACATTTCTCCAATAGCCAA+AGG 0.619561 4_2:+51033184 None:intergenic
GTGCTATATGAACGCCAACA+GGG 0.620699 4_2:+51031748 None:intergenic
TCATTCTCCTGTGTGAGTGG+TGG 0.625725 4_2:+51033313 None:intergenic
GCAGTTGATGGTGAATGAGA+GGG 0.632096 4_2:+51033405 None:intergenic
TAATTCTGGAAATAAAACTC+AGG 0.635294 4_2:+51032351 None:intergenic
AAGTTGTGTTGTGTAAGTGC+AGG 0.638222 4_2:+51032203 None:intergenic
GTTCAGTCACTGTGCCTCAG+GGG 0.641281 4_2:-51031674 Msa0605250:CDS
GAACAACAGTCGTTATTGGA+GGG 0.642119 4_2:-51029923 Msa0605250:CDS
CCAGAAAGGTCCTTATGGTG+TGG 0.650861 4_2:-51033251 Msa0605250:CDS
TGCTATATGAACGCCAACAG+GGG 0.655968 4_2:+51031749 None:intergenic
CTGCTGTTGATAATGGGTGG+AGG 0.663763 4_2:-51031726 Msa0605250:CDS
AATACATGTGATCAAAACCA+AGG 0.672461 4_2:+51032277 None:intergenic
GAGGAACTTTAAGTGCGGCA+GGG 0.674685 4_2:-51031707 Msa0605250:CDS
TGGTATCACCATATACCAGA+CGG 0.679132 4_2:-51031270 Msa0605250:CDS
GTTCTGTTGAATTTGAACAA+GGG 0.681172 4_2:+51033445 None:intergenic
GGATTATTATGAAAGTGGAG+AGG 0.690088 4_2:-51031553 Msa0605250:intron
GCACTGCTGTTGATAATGGG+TGG 0.691436 4_2:-51031729 Msa0605250:CDS
ACAACAAAATTCAGCCCCTG+AGG 0.701712 4_2:+51031660 None:intergenic
GGGTGGAGGAACTTTAAGTG+CGG 0.709261 4_2:-51031712 Msa0605250:CDS
GGAAAGGAAAGAAAGCCGGT+AGG 0.713048 4_2:+51031621 None:intergenic
AGAGCATCAATCCAAGACGT+CGG 0.726779 4_2:-51032011 Msa0605250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGATTAAATTGATTTT+AGG - chr4_2:51030353-51030372 Msa0605250:intron 10.0%
!! AAAATATTTGTTTCAATATT+TGG - chr4_2:51031972-51031991 Msa0605250:intron 10.0%
!!! AAAAATGTGAATTTAATTTT+TGG - chr4_2:51033068-51033087 Msa0605250:intron 10.0%
!!! ATTTTGATTAAATTGATTTT+AGG - chr4_2:51030353-51030372 Msa0605250:intron 10.0%
!! AAAATATTTGTTTCAATATT+TGG - chr4_2:51031972-51031991 Msa0605250:intron 10.0%
!!! AAAAATGTGAATTTAATTTT+TGG - chr4_2:51033068-51033087 Msa0605250:intron 10.0%
!!! ATTTATCTTATCTTTTGATA+TGG - chr4_2:51030106-51030125 Msa0605250:intron 15.0%
!! TCTAAATAACAAAAGTAATA+TGG + chr4_2:51030173-51030192 None:intergenic 15.0%
!!! AAAATGTAATTTTGGATTAT+AGG - chr4_2:51031218-51031237 Msa0605250:CDS 15.0%
!!! AATGAATTTTAGTTTGTATT+TGG - chr4_2:51032029-51032048 Msa0605250:CDS 15.0%
!!! CAAAAATCTTTTTCTTTTAT+TGG + chr4_2:51032345-51032364 None:intergenic 15.0%
!! AAATGATAATTTCATATACT+TGG + chr4_2:51032895-51032914 None:intergenic 15.0%
!!! ATTTATCTTATCTTTTGATA+TGG - chr4_2:51030106-51030125 Msa0605250:intron 15.0%
!! TCTAAATAACAAAAGTAATA+TGG + chr4_2:51030173-51030192 None:intergenic 15.0%
!!! AAAATGTAATTTTGGATTAT+AGG - chr4_2:51031218-51031237 Msa0605250:CDS 15.0%
!!! AATGAATTTTAGTTTGTATT+TGG - chr4_2:51032029-51032048 Msa0605250:CDS 15.0%
!!! CAAAAATCTTTTTCTTTTAT+TGG + chr4_2:51032345-51032364 None:intergenic 15.0%
!! AAATGATAATTTCATATACT+TGG + chr4_2:51032895-51032914 None:intergenic 15.0%
!!! TTCACTATTGCTTTTTTAAT+GGG - chr4_2:51029881-51029900 Msa0605250:CDS 20.0%
!! TATGTAATGAGAACTAAAAA+GGG + chr4_2:51029975-51029994 None:intergenic 20.0%
!! ATTAAGCTATTTATCAAAAC+AGG - chr4_2:51030147-51030166 Msa0605250:intron 20.0%
!! ATAAATGACTAAGATATGTT+TGG + chr4_2:51030545-51030564 None:intergenic 20.0%
!! AAAATATTCAAGTCTATTGT+TGG + chr4_2:51031185-51031204 None:intergenic 20.0%
!! TTAATTCATGAAATTACAAC+CGG - chr4_2:51031563-51031582 Msa0605250:CDS 20.0%
!! AACAAAATAGCAAAACAATA+AGG + chr4_2:51031629-51031648 None:intergenic 20.0%
!!! TGCTATTTTGTTGTAAAATT+TGG - chr4_2:51031637-51031656 Msa0605250:CDS 20.0%
!! ATACAAACTAAAATTCATTG+AGG + chr4_2:51032028-51032047 None:intergenic 20.0%
!! TAGATAATTGTAATAGTTTG+AGG - chr4_2:51032317-51032336 Msa0605250:CDS 20.0%
!! AAATTACAAATTAAGTGCAA+AGG - chr4_2:51032406-51032425 Msa0605250:intron 20.0%
!! TCTATAAATGAAAGCAAAAT+TGG + chr4_2:51032944-51032963 None:intergenic 20.0%
!!! TTTTGGTAAATTGAAAGATA+TGG - chr4_2:51033085-51033104 Msa0605250:intron 20.0%
!! TTTGGTAAATTGAAAGATAT+GGG - chr4_2:51033086-51033105 Msa0605250:intron 20.0%
!!! TTCACTATTGCTTTTTTAAT+GGG - chr4_2:51029881-51029900 Msa0605250:CDS 20.0%
!! TATGTAATGAGAACTAAAAA+GGG + chr4_2:51029975-51029994 None:intergenic 20.0%
!! ATTAAGCTATTTATCAAAAC+AGG - chr4_2:51030147-51030166 Msa0605250:intron 20.0%
!! ATAAATGACTAAGATATGTT+TGG + chr4_2:51030545-51030564 None:intergenic 20.0%
!! AAAATATTCAAGTCTATTGT+TGG + chr4_2:51031185-51031204 None:intergenic 20.0%
!! TTAATTCATGAAATTACAAC+CGG - chr4_2:51031563-51031582 Msa0605250:CDS 20.0%
!! AACAAAATAGCAAAACAATA+AGG + chr4_2:51031629-51031648 None:intergenic 20.0%
!!! TGCTATTTTGTTGTAAAATT+TGG - chr4_2:51031637-51031656 Msa0605250:CDS 20.0%
!! ATACAAACTAAAATTCATTG+AGG + chr4_2:51032028-51032047 None:intergenic 20.0%
!! TAGATAATTGTAATAGTTTG+AGG - chr4_2:51032317-51032336 Msa0605250:CDS 20.0%
!! AAATTACAAATTAAGTGCAA+AGG - chr4_2:51032406-51032425 Msa0605250:intron 20.0%
!! TCTATAAATGAAAGCAAAAT+TGG + chr4_2:51032944-51032963 None:intergenic 20.0%
!!! TTTTGGTAAATTGAAAGATA+TGG - chr4_2:51033085-51033104 Msa0605250:intron 20.0%
!! TTTGGTAAATTGAAAGATAT+GGG - chr4_2:51033086-51033105 Msa0605250:intron 20.0%
!!! GTTCACTATTGCTTTTTTAA+TGG - chr4_2:51029880-51029899 Msa0605250:CDS 25.0%
!!! TATTGCTTTTTTAATGGGTT+TGG - chr4_2:51029886-51029905 Msa0605250:CDS 25.0%
!!! ATTGCTTTTTTAATGGGTTT+GGG - chr4_2:51029887-51029906 Msa0605250:CDS 25.0%
! CTATGTAATGAGAACTAAAA+AGG + chr4_2:51029976-51029995 None:intergenic 25.0%
!!! CTTTTTAGTTCTCATTACAT+AGG - chr4_2:51029974-51029993 Msa0605250:intron 25.0%
! GGGTGAACTTTAAATTATTA+TGG - chr4_2:51030235-51030254 Msa0605250:CDS 25.0%
! GCTAACATATACTTATCATA+TGG + chr4_2:51030314-51030333 None:intergenic 25.0%
!! TTTAGGTAAAAGTGTGTTTA+CGG - chr4_2:51030370-51030389 Msa0605250:intron 25.0%
! TCACTAAAGACAAATTTCTA+TGG - chr4_2:51030641-51030660 Msa0605250:intron 25.0%
!! TAATTCTGGAAATAAAACTC+AGG + chr4_2:51030696-51030715 None:intergenic 25.0%
! ATCAAGATTTCAAAAAGGTT+TGG - chr4_2:51030870-51030889 Msa0605250:intron 25.0%
! AAATAGTTAAGTGTGAATCA+TGG + chr4_2:51031101-51031120 None:intergenic 25.0%
!! TCTATGGATTATTATGAAAG+TGG - chr4_2:51031486-51031505 Msa0605250:intron 25.0%
!! ATATACACTTTGACTTATTC+CGG + chr4_2:51031585-51031604 None:intergenic 25.0%
! TGATACCATCATATCTTAAA+GGG + chr4_2:51031762-51031781 None:intergenic 25.0%
! AATGGAGATAAGAAACTTTA+TGG - chr4_2:51031874-51031893 Msa0605250:intron 25.0%
! ATCAGATAATTGAAGTAGTT+AGG - chr4_2:51032278-51032297 Msa0605250:CDS 25.0%
! TAACATAAGCATTAAGCAAT+AGG + chr4_2:51032755-51032774 None:intergenic 25.0%
!!! AGTGTTATTTGCTCATTTTT+AGG + chr4_2:51033004-51033023 None:intergenic 25.0%
! TAAAAATGAGCAAATAACAC+TGG - chr4_2:51033003-51033022 Msa0605250:intron 25.0%
! ATGATGATTCAACTATTTCA+GGG + chr4_2:51033206-51033225 None:intergenic 25.0%
!!! TTATAGCTTTTGAGATATCA+AGG - chr4_2:51033264-51033283 Msa0605250:CDS 25.0%
! GAATTAAAAGACTCTTCAAT+TGG - chr4_2:51033290-51033309 Msa0605250:CDS 25.0%
!!! TGAATAGTATCTTTGCTATT+TGG - chr4_2:51033530-51033549 Msa0605250:exon 25.0%
!!! GTTCACTATTGCTTTTTTAA+TGG - chr4_2:51029880-51029899 Msa0605250:CDS 25.0%
!!! TATTGCTTTTTTAATGGGTT+TGG - chr4_2:51029886-51029905 Msa0605250:CDS 25.0%
!!! ATTGCTTTTTTAATGGGTTT+GGG - chr4_2:51029887-51029906 Msa0605250:CDS 25.0%
! CTATGTAATGAGAACTAAAA+AGG + chr4_2:51029976-51029995 None:intergenic 25.0%
!!! CTTTTTAGTTCTCATTACAT+AGG - chr4_2:51029974-51029993 Msa0605250:intron 25.0%
! GGGTGAACTTTAAATTATTA+TGG - chr4_2:51030235-51030254 Msa0605250:CDS 25.0%
! GCTAACATATACTTATCATA+TGG + chr4_2:51030314-51030333 None:intergenic 25.0%
!! TTTAGGTAAAAGTGTGTTTA+CGG - chr4_2:51030370-51030389 Msa0605250:intron 25.0%
! TCACTAAAGACAAATTTCTA+TGG - chr4_2:51030641-51030660 Msa0605250:intron 25.0%
!! TAATTCTGGAAATAAAACTC+AGG + chr4_2:51030696-51030715 None:intergenic 25.0%
! ATCAAGATTTCAAAAAGGTT+TGG - chr4_2:51030870-51030889 Msa0605250:intron 25.0%
! AAATAGTTAAGTGTGAATCA+TGG + chr4_2:51031101-51031120 None:intergenic 25.0%
!! TCTATGGATTATTATGAAAG+TGG - chr4_2:51031486-51031505 Msa0605250:intron 25.0%
!! ATATACACTTTGACTTATTC+CGG + chr4_2:51031585-51031604 None:intergenic 25.0%
! TGATACCATCATATCTTAAA+GGG + chr4_2:51031762-51031781 None:intergenic 25.0%
! AATGGAGATAAGAAACTTTA+TGG - chr4_2:51031874-51031893 Msa0605250:intron 25.0%
! ATCAGATAATTGAAGTAGTT+AGG - chr4_2:51032278-51032297 Msa0605250:CDS 25.0%
! TAACATAAGCATTAAGCAAT+AGG + chr4_2:51032755-51032774 None:intergenic 25.0%
!!! AGTGTTATTTGCTCATTTTT+AGG + chr4_2:51033004-51033023 None:intergenic 25.0%
! TAAAAATGAGCAAATAACAC+TGG - chr4_2:51033003-51033022 Msa0605250:intron 25.0%
! ATGATGATTCAACTATTTCA+GGG + chr4_2:51033206-51033225 None:intergenic 25.0%
!!! TTATAGCTTTTGAGATATCA+AGG - chr4_2:51033264-51033283 Msa0605250:CDS 25.0%
! GAATTAAAAGACTCTTCAAT+TGG - chr4_2:51033290-51033309 Msa0605250:CDS 25.0%
!!! TGAATAGTATCTTTGCTATT+TGG - chr4_2:51033530-51033549 Msa0605250:exon 25.0%
!! TTGAGAAGACATTGATTCAT+AGG + chr4_2:51029563-51029582 None:intergenic 30.0%
GTTCTGTTGAATTTGAACAA+GGG + chr4_2:51029602-51029621 None:intergenic 30.0%
AGTTCTGTTGAATTTGAACA+AGG + chr4_2:51029603-51029622 None:intergenic 30.0%
!!! TATTCTTTCCCTTGTTTTTG+AGG + chr4_2:51029667-51029686 None:intergenic 30.0%
GAGAATGATGATATCAACAA+TGG - chr4_2:51029746-51029765 Msa0605250:three_prime_UTR 30.0%
! TAAGTATATGTTAGCTTCTG+CGG - chr4_2:51030319-51030338 Msa0605250:intron 30.0%
! AATATTTTCACGTGAAAGTG+AGG - chr4_2:51030411-51030430 Msa0605250:CDS 30.0%
AATGACTAAGATATGTTTGG+TGG + chr4_2:51030542-51030561 None:intergenic 30.0%
!! GAGAGCTAAAATTGATTTTG+AGG + chr4_2:51030601-51030620 None:intergenic 30.0%
TAAAGACAAATTTCTATGGC+AGG - chr4_2:51030645-51030664 Msa0605250:intron 30.0%
CAAGTAAAAAATCCTAACAC+AGG + chr4_2:51030732-51030751 None:intergenic 30.0%
!!! CTGTGTTAGGATTTTTTACT+TGG - chr4_2:51030730-51030749 Msa0605250:intron 30.0%
!!! TAGGATTTTTTACTTGGAGA+TGG - chr4_2:51030736-51030755 Msa0605250:intron 30.0%
AATACATGTGATCAAAACCA+AGG + chr4_2:51030770-51030789 None:intergenic 30.0%
ACCTATATTTCTTGCAATGT+TGG - chr4_2:51030794-51030813 Msa0605250:intron 30.0%
!!! CTTTTTGAAATCTTGATGAG+TGG + chr4_2:51030867-51030886 None:intergenic 30.0%
CACTCATCAAGATTTCAAAA+AGG - chr4_2:51030865-51030884 Msa0605250:intron 30.0%
! GATTTCAAAAAGGTTTGGTT+TGG - chr4_2:51030875-51030894 Msa0605250:intron 30.0%
! TTTTCTGTGTTCATAATGCT+TGG - chr4_2:51030905-51030924 Msa0605250:intron 30.0%
! GCGCTAACAAAATGTAATTT+TGG - chr4_2:51031210-51031229 Msa0605250:CDS 30.0%
GGATTATAGGTATTCTTGAA+AGG - chr4_2:51031231-51031250 Msa0605250:CDS 30.0%
ATTAAATGCATCAGTTGGAA+AGG + chr4_2:51031442-51031461 None:intergenic 30.0%
TCTGTATTAAATGCATCAGT+TGG + chr4_2:51031447-51031466 None:intergenic 30.0%
! TGGTTTTCGATTTTTGTTAC+AGG - chr4_2:51031657-51031676 Msa0605250:CDS 30.0%
GTGATACCATCATATCTTAA+AGG + chr4_2:51031763-51031782 None:intergenic 30.0%
TTATCTCCATTGATCTTTAG+AGG + chr4_2:51031865-51031884 None:intergenic 30.0%
! ACTTTATGGTACTTTTCTAC+CGG - chr4_2:51031888-51031907 Msa0605250:intron 30.0%
ACTTACATTCCTTTAACATC+AGG + chr4_2:51031931-51031950 None:intergenic 30.0%
GTTTCAATATTTGGAAGCTT+TGG - chr4_2:51031981-51032000 Msa0605250:intron 30.0%
ACAAGTCTTTAGTGTATGAT+TGG - chr4_2:51032246-51032265 Msa0605250:CDS 30.0%
CAAGTCTTTAGTGTATGATT+GGG - chr4_2:51032247-51032266 Msa0605250:CDS 30.0%
AAGTCTTTAGTGTATGATTG+GGG - chr4_2:51032248-51032267 Msa0605250:CDS 30.0%
GTCAATTGTCCTTTATGATA+AGG - chr4_2:51032551-51032570 Msa0605250:intron 30.0%
ATTGTCCTTTATGATAAGGA+AGG - chr4_2:51032555-51032574 Msa0605250:intron 30.0%
TTGTCCTTTATGATAAGGAA+GGG - chr4_2:51032556-51032575 Msa0605250:intron 30.0%
ATTTCCCTTCCTTATCATAA+AGG + chr4_2:51032563-51032582 None:intergenic 30.0%
TGCATCTAAAGGAAAATAAC+CGG + chr4_2:51032706-51032725 None:intergenic 30.0%
ACACAACTAATTGCATCTAA+AGG + chr4_2:51032717-51032736 None:intergenic 30.0%
TTATGCATATGACATTTGTC+TGG + chr4_2:51032971-51032990 None:intergenic 30.0%
GATGATGATTCAACTATTTC+AGG + chr4_2:51033207-51033226 None:intergenic 30.0%
ATCTAAGAAAACTGATAGCA+TGG - chr4_2:51033230-51033249 Msa0605250:CDS 30.0%
TAAAAGACTCTTCAATTGGA+TGG - chr4_2:51033294-51033313 Msa0605250:CDS 30.0%
AAAAGACTCTTCAATTGGAT+GGG - chr4_2:51033295-51033314 Msa0605250:CDS 30.0%
CGACATACAAACATACAAAT+TGG - chr4_2:51033356-51033375 Msa0605250:CDS 30.0%
! AAGATGATCTGCAAAAGTTT+TGG + chr4_2:51033403-51033422 None:intergenic 30.0%
!! TTGAGAAGACATTGATTCAT+AGG + chr4_2:51029563-51029582 None:intergenic 30.0%
GTTCTGTTGAATTTGAACAA+GGG + chr4_2:51029602-51029621 None:intergenic 30.0%
AGTTCTGTTGAATTTGAACA+AGG + chr4_2:51029603-51029622 None:intergenic 30.0%
!!! TATTCTTTCCCTTGTTTTTG+AGG + chr4_2:51029667-51029686 None:intergenic 30.0%
GAGAATGATGATATCAACAA+TGG - chr4_2:51029746-51029765 Msa0605250:three_prime_UTR 30.0%
! TAAGTATATGTTAGCTTCTG+CGG - chr4_2:51030319-51030338 Msa0605250:intron 30.0%
! AATATTTTCACGTGAAAGTG+AGG - chr4_2:51030411-51030430 Msa0605250:CDS 30.0%
AATGACTAAGATATGTTTGG+TGG + chr4_2:51030542-51030561 None:intergenic 30.0%
!! GAGAGCTAAAATTGATTTTG+AGG + chr4_2:51030601-51030620 None:intergenic 30.0%
TAAAGACAAATTTCTATGGC+AGG - chr4_2:51030645-51030664 Msa0605250:intron 30.0%
CAAGTAAAAAATCCTAACAC+AGG + chr4_2:51030732-51030751 None:intergenic 30.0%
!!! CTGTGTTAGGATTTTTTACT+TGG - chr4_2:51030730-51030749 Msa0605250:intron 30.0%
!!! TAGGATTTTTTACTTGGAGA+TGG - chr4_2:51030736-51030755 Msa0605250:intron 30.0%
AATACATGTGATCAAAACCA+AGG + chr4_2:51030770-51030789 None:intergenic 30.0%
ACCTATATTTCTTGCAATGT+TGG - chr4_2:51030794-51030813 Msa0605250:intron 30.0%
!!! CTTTTTGAAATCTTGATGAG+TGG + chr4_2:51030867-51030886 None:intergenic 30.0%
CACTCATCAAGATTTCAAAA+AGG - chr4_2:51030865-51030884 Msa0605250:intron 30.0%
! GATTTCAAAAAGGTTTGGTT+TGG - chr4_2:51030875-51030894 Msa0605250:intron 30.0%
! TTTTCTGTGTTCATAATGCT+TGG - chr4_2:51030905-51030924 Msa0605250:intron 30.0%
! GCGCTAACAAAATGTAATTT+TGG - chr4_2:51031210-51031229 Msa0605250:CDS 30.0%
GGATTATAGGTATTCTTGAA+AGG - chr4_2:51031231-51031250 Msa0605250:CDS 30.0%
ATTAAATGCATCAGTTGGAA+AGG + chr4_2:51031442-51031461 None:intergenic 30.0%
TCTGTATTAAATGCATCAGT+TGG + chr4_2:51031447-51031466 None:intergenic 30.0%
! TGGTTTTCGATTTTTGTTAC+AGG - chr4_2:51031657-51031676 Msa0605250:CDS 30.0%
GTGATACCATCATATCTTAA+AGG + chr4_2:51031763-51031782 None:intergenic 30.0%
TTATCTCCATTGATCTTTAG+AGG + chr4_2:51031865-51031884 None:intergenic 30.0%
! ACTTTATGGTACTTTTCTAC+CGG - chr4_2:51031888-51031907 Msa0605250:intron 30.0%
ACTTACATTCCTTTAACATC+AGG + chr4_2:51031931-51031950 None:intergenic 30.0%
GTTTCAATATTTGGAAGCTT+TGG - chr4_2:51031981-51032000 Msa0605250:intron 30.0%
ACAAGTCTTTAGTGTATGAT+TGG - chr4_2:51032246-51032265 Msa0605250:CDS 30.0%
CAAGTCTTTAGTGTATGATT+GGG - chr4_2:51032247-51032266 Msa0605250:CDS 30.0%
AAGTCTTTAGTGTATGATTG+GGG - chr4_2:51032248-51032267 Msa0605250:CDS 30.0%
GTCAATTGTCCTTTATGATA+AGG - chr4_2:51032551-51032570 Msa0605250:intron 30.0%
ATTGTCCTTTATGATAAGGA+AGG - chr4_2:51032555-51032574 Msa0605250:intron 30.0%
TTGTCCTTTATGATAAGGAA+GGG - chr4_2:51032556-51032575 Msa0605250:intron 30.0%
ATTTCCCTTCCTTATCATAA+AGG + chr4_2:51032563-51032582 None:intergenic 30.0%
TGCATCTAAAGGAAAATAAC+CGG + chr4_2:51032706-51032725 None:intergenic 30.0%
ACACAACTAATTGCATCTAA+AGG + chr4_2:51032717-51032736 None:intergenic 30.0%
TTATGCATATGACATTTGTC+TGG + chr4_2:51032971-51032990 None:intergenic 30.0%
GATGATGATTCAACTATTTC+AGG + chr4_2:51033207-51033226 None:intergenic 30.0%
ATCTAAGAAAACTGATAGCA+TGG - chr4_2:51033230-51033249 Msa0605250:CDS 30.0%
TAAAAGACTCTTCAATTGGA+TGG - chr4_2:51033294-51033313 Msa0605250:CDS 30.0%
AAAAGACTCTTCAATTGGAT+GGG - chr4_2:51033295-51033314 Msa0605250:CDS 30.0%
CGACATACAAACATACAAAT+TGG - chr4_2:51033356-51033375 Msa0605250:CDS 30.0%
! AAGATGATCTGCAAAAGTTT+TGG + chr4_2:51033403-51033422 None:intergenic 30.0%
AGTTTCAGTTTCCAGTTTGA+GGG + chr4_2:51029496-51029515 None:intergenic 35.0%
TTGAACAAGGGATGAAAAGT+GGG + chr4_2:51029590-51029609 None:intergenic 35.0%
TTTGAACAAGGGATGAAAAG+TGG + chr4_2:51029591-51029610 None:intergenic 35.0%
AACTGCAACCTCAAAAACAA+GGG - chr4_2:51029656-51029675 Msa0605250:three_prime_UTR 35.0%
GGTCAAGAAGTTGAGTAAAA+AGG - chr4_2:51029814-51029833 Msa0605250:CDS 35.0%
! GATTCTCTCTAATTTGCCTT+TGG - chr4_2:51029844-51029863 Msa0605250:CDS 35.0%
! TCTAATTTGCCTTTGGCTAT+TGG - chr4_2:51029851-51029870 Msa0605250:CDS 35.0%
AACATTTCTCCAATAGCCAA+AGG + chr4_2:51029863-51029882 None:intergenic 35.0%
TCCTCAAGTTTGTGAATTGT+GGG - chr4_2:51030215-51030234 Msa0605250:CDS 35.0%
AGTCTAAAAATCACGATCGA+AGG - chr4_2:51030449-51030468 Msa0605250:CDS 35.0%
!! GAATGATCGCATTTGCTTTT+GGG + chr4_2:51030623-51030642 None:intergenic 35.0%
! TGAATGATCGCATTTGCTTT+TGG + chr4_2:51030624-51030643 None:intergenic 35.0%
GCCAACATTGCAAGAAATAT+AGG + chr4_2:51030798-51030817 None:intergenic 35.0%
GACCATCTACGAAACAAATA+AGG + chr4_2:51030958-51030977 None:intergenic 35.0%
!! TTAATATAGTACCGACGTCT+TGG + chr4_2:51031047-51031066 None:intergenic 35.0%
AGACGTCGGTACTATATTAA+TGG - chr4_2:51031047-51031066 Msa0605250:intron 35.0%
GACGTCGGTACTATATTAAT+GGG - chr4_2:51031048-51031067 Msa0605250:intron 35.0%
! TATAGCACTGCTGTTGATAA+TGG - chr4_2:51031311-51031330 Msa0605250:CDS 35.0%
!! ATAGCACTGCTGTTGATAAT+GGG - chr4_2:51031312-51031331 Msa0605250:CDS 35.0%
! TTTGTTGTAGGAGATGTTCT+CGG - chr4_2:51031399-51031418 Msa0605250:intron 35.0%
GGATTATTATGAAAGTGGAG+AGG - chr4_2:51031491-51031510 Msa0605250:intron 35.0%
! TTTTCCATCCATGTTCAAGA+GGG + chr4_2:51031707-51031726 None:intergenic 35.0%
TGGATGGAAAAGAAGTAATG+AGG - chr4_2:51031716-51031735 Msa0605250:CDS 35.0%
!! AACGACCCTTTAAGATATGA+TGG - chr4_2:51031754-51031773 Msa0605250:CDS 35.0%
CAAATTCTCAAGGACAATGA+AGG - chr4_2:51031817-51031836 Msa0605250:intron 35.0%
CAATGAAGGACCTTATAACT+TGG - chr4_2:51031831-51031850 Msa0605250:intron 35.0%
GTTAACTCTCCTGATGTTAA+AGG - chr4_2:51031919-51031938 Msa0605250:intron 35.0%
AGTCTTTAGTGTATGATTGG+GGG - chr4_2:51032249-51032268 Msa0605250:CDS 35.0%
TATCAAGTCCTAGTCTGTAA+TGG + chr4_2:51032436-51032455 None:intergenic 35.0%
TAGGACTTGATATGTCATTC+TGG - chr4_2:51032444-51032463 Msa0605250:intron 35.0%
!! TTGATTGGGAGCTTTGAATT+AGG + chr4_2:51032603-51032622 None:intergenic 35.0%
TAAAGGAAAATAACCGGACT+TGG + chr4_2:51032700-51032719 None:intergenic 35.0%
CAGCTATTTATCTCATTCAC+AGG - chr4_2:51032842-51032861 Msa0605250:intron 35.0%
! ATTGGATGGGAGCATATATA+TGG - chr4_2:51033308-51033327 Msa0605250:CDS 35.0%
AACATACAAATTGGATGCGA+TGG - chr4_2:51033365-51033384 Msa0605250:CDS 35.0%
GATACAAGACATTAGAGCTT+TGG + chr4_2:51033504-51033523 None:intergenic 35.0%
CAACTGCAAACTGTACATTA+TGG + chr4_2:51033561-51033580 None:intergenic 35.0%
AGTTTCAGTTTCCAGTTTGA+GGG + chr4_2:51029496-51029515 None:intergenic 35.0%
TTGAACAAGGGATGAAAAGT+GGG + chr4_2:51029590-51029609 None:intergenic 35.0%
TTTGAACAAGGGATGAAAAG+TGG + chr4_2:51029591-51029610 None:intergenic 35.0%
AACTGCAACCTCAAAAACAA+GGG - chr4_2:51029656-51029675 Msa0605250:three_prime_UTR 35.0%
GGTCAAGAAGTTGAGTAAAA+AGG - chr4_2:51029814-51029833 Msa0605250:CDS 35.0%
! GATTCTCTCTAATTTGCCTT+TGG - chr4_2:51029844-51029863 Msa0605250:CDS 35.0%
! TCTAATTTGCCTTTGGCTAT+TGG - chr4_2:51029851-51029870 Msa0605250:CDS 35.0%
AACATTTCTCCAATAGCCAA+AGG + chr4_2:51029863-51029882 None:intergenic 35.0%
TCCTCAAGTTTGTGAATTGT+GGG - chr4_2:51030215-51030234 Msa0605250:CDS 35.0%
AGTCTAAAAATCACGATCGA+AGG - chr4_2:51030449-51030468 Msa0605250:CDS 35.0%
!! GAATGATCGCATTTGCTTTT+GGG + chr4_2:51030623-51030642 None:intergenic 35.0%
! TGAATGATCGCATTTGCTTT+TGG + chr4_2:51030624-51030643 None:intergenic 35.0%
GCCAACATTGCAAGAAATAT+AGG + chr4_2:51030798-51030817 None:intergenic 35.0%
GACCATCTACGAAACAAATA+AGG + chr4_2:51030958-51030977 None:intergenic 35.0%
!! TTAATATAGTACCGACGTCT+TGG + chr4_2:51031047-51031066 None:intergenic 35.0%
AGACGTCGGTACTATATTAA+TGG - chr4_2:51031047-51031066 Msa0605250:intron 35.0%
GACGTCGGTACTATATTAAT+GGG - chr4_2:51031048-51031067 Msa0605250:intron 35.0%
! TATAGCACTGCTGTTGATAA+TGG - chr4_2:51031311-51031330 Msa0605250:CDS 35.0%
!! ATAGCACTGCTGTTGATAAT+GGG - chr4_2:51031312-51031331 Msa0605250:CDS 35.0%
! TTTGTTGTAGGAGATGTTCT+CGG - chr4_2:51031399-51031418 Msa0605250:intron 35.0%
GGATTATTATGAAAGTGGAG+AGG - chr4_2:51031491-51031510 Msa0605250:intron 35.0%
! TTTTCCATCCATGTTCAAGA+GGG + chr4_2:51031707-51031726 None:intergenic 35.0%
TGGATGGAAAAGAAGTAATG+AGG - chr4_2:51031716-51031735 Msa0605250:CDS 35.0%
!! AACGACCCTTTAAGATATGA+TGG - chr4_2:51031754-51031773 Msa0605250:CDS 35.0%
CAAATTCTCAAGGACAATGA+AGG - chr4_2:51031817-51031836 Msa0605250:intron 35.0%
CAATGAAGGACCTTATAACT+TGG - chr4_2:51031831-51031850 Msa0605250:intron 35.0%
GTTAACTCTCCTGATGTTAA+AGG - chr4_2:51031919-51031938 Msa0605250:intron 35.0%
AGTCTTTAGTGTATGATTGG+GGG - chr4_2:51032249-51032268 Msa0605250:CDS 35.0%
TATCAAGTCCTAGTCTGTAA+TGG + chr4_2:51032436-51032455 None:intergenic 35.0%
TAGGACTTGATATGTCATTC+TGG - chr4_2:51032444-51032463 Msa0605250:intron 35.0%
!! TTGATTGGGAGCTTTGAATT+AGG + chr4_2:51032603-51032622 None:intergenic 35.0%
TAAAGGAAAATAACCGGACT+TGG + chr4_2:51032700-51032719 None:intergenic 35.0%
CAGCTATTTATCTCATTCAC+AGG - chr4_2:51032842-51032861 Msa0605250:intron 35.0%
! ATTGGATGGGAGCATATATA+TGG - chr4_2:51033308-51033327 Msa0605250:CDS 35.0%
AACATACAAATTGGATGCGA+TGG - chr4_2:51033365-51033384 Msa0605250:CDS 35.0%
GATACAAGACATTAGAGCTT+TGG + chr4_2:51033504-51033523 None:intergenic 35.0%
CAACTGCAAACTGTACATTA+TGG + chr4_2:51033561-51033580 None:intergenic 35.0%
CAGTTTCAGTTTCCAGTTTG+AGG + chr4_2:51029497-51029516 None:intergenic 40.0%
TGTGTCACATGATGTCTTTG+AGG - chr4_2:51029534-51029553 Msa0605250:three_prime_UTR 40.0%
!!! GTTTTTGAGGTTGCAGTTGA+TGG + chr4_2:51029654-51029673 None:intergenic 40.0%
CAACTGCAACCTCAAAAACA+AGG - chr4_2:51029655-51029674 Msa0605250:three_prime_UTR 40.0%
AAGAACCAGAAAGGTCCTTA+TGG - chr4_2:51029788-51029807 Msa0605250:exon 40.0%
AACTTCTTGACCACACCATA+AGG + chr4_2:51029806-51029825 None:intergenic 40.0%
AGTCTCACAAGTGTTTACGT+CGG + chr4_2:51030033-51030052 None:intergenic 40.0%
CTCCTCAAGTTTGTGAATTG+TGG - chr4_2:51030214-51030233 Msa0605250:CDS 40.0%
ACCCACAATTCACAAACTTG+AGG + chr4_2:51030219-51030238 None:intergenic 40.0%
GATGATCTTCAGGGTAATTC+TGG + chr4_2:51030710-51030729 None:intergenic 40.0%
CTAACACAGGATGATCTTCA+GGG + chr4_2:51030719-51030738 None:intergenic 40.0%
!! TGGAGATGGATTTTCTTCCT+TGG - chr4_2:51030750-51030769 Msa0605250:intron 40.0%
!! TATAAGGGAAGCACCAAGAA+GGG + chr4_2:51030820-51030839 None:intergenic 40.0%
TGTGTAAGTGCAGGCTATAA+GGG + chr4_2:51030835-51030854 None:intergenic 40.0%
TTGTGTAAGTGCAGGCTATA+AGG + chr4_2:51030836-51030855 None:intergenic 40.0%
AAGTTGTGTTGTGTAAGTGC+AGG + chr4_2:51030844-51030863 None:intergenic 40.0%
CGACATTTCTTGATCACTGA+GGG - chr4_2:51030932-51030951 Msa0605250:intron 40.0%
!! GGCCTTATTTGTTTCGTAGA+TGG - chr4_2:51030953-51030972 Msa0605250:intron 40.0%
CTCTTGCTTACGTATAACCT+CGG + chr4_2:51030995-51031014 None:intergenic 40.0%
GGTACTATATTAATGGGAGC+TGG - chr4_2:51031054-51031073 Msa0605250:intron 40.0%
ATTAATGGGAGCTGGATATG+AGG - chr4_2:51031062-51031081 Msa0605250:intron 40.0%
! CCACGAAAAGCATACAAAGT+TGG + chr4_2:51031258-51031277 None:intergenic 40.0%
! CCAACTTTGTATGCTTTTCG+TGG - chr4_2:51031255-51031274 Msa0605250:CDS 40.0%
AGTTGGAAAGGAAAGAAAGC+CGG + chr4_2:51031430-51031449 None:intergenic 40.0%
TCACGTCAACAGATTCTCTA+TGG - chr4_2:51031470-51031489 Msa0605250:intron 40.0%
GAAAGTGGAGAGGTAAATGT+TGG - chr4_2:51031501-51031520 Msa0605250:intron 40.0%
CATGTTCAAGAGGGAAAGAT+CGG + chr4_2:51031698-51031717 None:intergenic 40.0%
! CTTTTCCATCCATGTTCAAG+AGG + chr4_2:51031708-51031727 None:intergenic 40.0%
TGGTATCACCATATACCAGA+CGG - chr4_2:51031774-51031793 Msa0605250:CDS 40.0%
TTCAGCTCTGCAAATTCTCA+AGG - chr4_2:51031807-51031826 Msa0605250:CDS 40.0%
AGGACCTTATAACTTGGCTA+TGG - chr4_2:51031837-51031856 Msa0605250:intron 40.0%
! ATGGCACCTCTAAAGATCAA+TGG - chr4_2:51031856-51031875 Msa0605250:intron 40.0%
! TATGGTACTTTTCTACCGGT+TGG - chr4_2:51031892-51031911 Msa0605250:intron 40.0%
TGAGTGTTTACGAAAGCTTG+TGG - chr4_2:51032098-51032117 Msa0605250:intron 40.0%
CATAAAGGACAATTGACTGC+AGG + chr4_2:51032548-51032567 None:intergenic 40.0%
GATAAGGAAGGGAAATTTGC+AGG - chr4_2:51032567-51032586 Msa0605250:intron 40.0%
AAGCTCCCAATCAACATTGA+CGG - chr4_2:51032609-51032628 Msa0605250:intron 40.0%
ATTGTCGTTGTGGATGCAAT+AGG - chr4_2:51032639-51032658 Msa0605250:intron 40.0%
AAGCAATAGGTCAGTGACAA+AGG + chr4_2:51032742-51032761 None:intergenic 40.0%
TATGTTATGCAGACTGATCC+TGG - chr4_2:51032768-51032787 Msa0605250:intron 40.0%
CCAAATCCAGCATATACAAC+TGG + chr4_2:51032798-51032817 None:intergenic 40.0%
CCAGTTGTATATGCTGGATT+TGG - chr4_2:51032795-51032814 Msa0605250:intron 40.0%
AAGATATGGGCCTTACAAGA+TGG - chr4_2:51033099-51033118 Msa0605250:intron 40.0%
GACTGTTGTTCCATCTTGTA+AGG + chr4_2:51033112-51033131 None:intergenic 40.0%
GATGGAACAACAGTCGTTAT+TGG - chr4_2:51033117-51033136 Msa0605250:intron 40.0%
GAACAACAGTCGTTATTGGA+GGG - chr4_2:51033121-51033140 Msa0605250:intron 40.0%
CAGAGCTAAGTTAGAGTTTC+CGG - chr4_2:51033152-51033171 Msa0605250:intron 40.0%
! GACATTAGAGCTTTGGTATC+TGG + chr4_2:51033497-51033516 None:intergenic 40.0%
CAGTTTCAGTTTCCAGTTTG+AGG + chr4_2:51029497-51029516 None:intergenic 40.0%
TGTGTCACATGATGTCTTTG+AGG - chr4_2:51029534-51029553 Msa0605250:three_prime_UTR 40.0%
!!! GTTTTTGAGGTTGCAGTTGA+TGG + chr4_2:51029654-51029673 None:intergenic 40.0%
CAACTGCAACCTCAAAAACA+AGG - chr4_2:51029655-51029674 Msa0605250:three_prime_UTR 40.0%
AAGAACCAGAAAGGTCCTTA+TGG - chr4_2:51029788-51029807 Msa0605250:exon 40.0%
AACTTCTTGACCACACCATA+AGG + chr4_2:51029806-51029825 None:intergenic 40.0%
AGTCTCACAAGTGTTTACGT+CGG + chr4_2:51030033-51030052 None:intergenic 40.0%
CTCCTCAAGTTTGTGAATTG+TGG - chr4_2:51030214-51030233 Msa0605250:CDS 40.0%
ACCCACAATTCACAAACTTG+AGG + chr4_2:51030219-51030238 None:intergenic 40.0%
GATGATCTTCAGGGTAATTC+TGG + chr4_2:51030710-51030729 None:intergenic 40.0%
CTAACACAGGATGATCTTCA+GGG + chr4_2:51030719-51030738 None:intergenic 40.0%
!! TGGAGATGGATTTTCTTCCT+TGG - chr4_2:51030750-51030769 Msa0605250:intron 40.0%
!! TATAAGGGAAGCACCAAGAA+GGG + chr4_2:51030820-51030839 None:intergenic 40.0%
TGTGTAAGTGCAGGCTATAA+GGG + chr4_2:51030835-51030854 None:intergenic 40.0%
TTGTGTAAGTGCAGGCTATA+AGG + chr4_2:51030836-51030855 None:intergenic 40.0%
AAGTTGTGTTGTGTAAGTGC+AGG + chr4_2:51030844-51030863 None:intergenic 40.0%
CGACATTTCTTGATCACTGA+GGG - chr4_2:51030932-51030951 Msa0605250:intron 40.0%
!! GGCCTTATTTGTTTCGTAGA+TGG - chr4_2:51030953-51030972 Msa0605250:intron 40.0%
CTCTTGCTTACGTATAACCT+CGG + chr4_2:51030995-51031014 None:intergenic 40.0%
GGTACTATATTAATGGGAGC+TGG - chr4_2:51031054-51031073 Msa0605250:intron 40.0%
ATTAATGGGAGCTGGATATG+AGG - chr4_2:51031062-51031081 Msa0605250:intron 40.0%
! CCACGAAAAGCATACAAAGT+TGG + chr4_2:51031258-51031277 None:intergenic 40.0%
! CCAACTTTGTATGCTTTTCG+TGG - chr4_2:51031255-51031274 Msa0605250:CDS 40.0%
AGTTGGAAAGGAAAGAAAGC+CGG + chr4_2:51031430-51031449 None:intergenic 40.0%
TCACGTCAACAGATTCTCTA+TGG - chr4_2:51031470-51031489 Msa0605250:intron 40.0%
GAAAGTGGAGAGGTAAATGT+TGG - chr4_2:51031501-51031520 Msa0605250:intron 40.0%
CATGTTCAAGAGGGAAAGAT+CGG + chr4_2:51031698-51031717 None:intergenic 40.0%
! CTTTTCCATCCATGTTCAAG+AGG + chr4_2:51031708-51031727 None:intergenic 40.0%
TGGTATCACCATATACCAGA+CGG - chr4_2:51031774-51031793 Msa0605250:CDS 40.0%
TTCAGCTCTGCAAATTCTCA+AGG - chr4_2:51031807-51031826 Msa0605250:CDS 40.0%
AGGACCTTATAACTTGGCTA+TGG - chr4_2:51031837-51031856 Msa0605250:intron 40.0%
! ATGGCACCTCTAAAGATCAA+TGG - chr4_2:51031856-51031875 Msa0605250:intron 40.0%
! TATGGTACTTTTCTACCGGT+TGG - chr4_2:51031892-51031911 Msa0605250:intron 40.0%
TGAGTGTTTACGAAAGCTTG+TGG - chr4_2:51032098-51032117 Msa0605250:intron 40.0%
CATAAAGGACAATTGACTGC+AGG + chr4_2:51032548-51032567 None:intergenic 40.0%
GATAAGGAAGGGAAATTTGC+AGG - chr4_2:51032567-51032586 Msa0605250:intron 40.0%
AAGCTCCCAATCAACATTGA+CGG - chr4_2:51032609-51032628 Msa0605250:intron 40.0%
ATTGTCGTTGTGGATGCAAT+AGG - chr4_2:51032639-51032658 Msa0605250:intron 40.0%
AAGCAATAGGTCAGTGACAA+AGG + chr4_2:51032742-51032761 None:intergenic 40.0%
TATGTTATGCAGACTGATCC+TGG - chr4_2:51032768-51032787 Msa0605250:intron 40.0%
CCAAATCCAGCATATACAAC+TGG + chr4_2:51032798-51032817 None:intergenic 40.0%
CCAGTTGTATATGCTGGATT+TGG - chr4_2:51032795-51032814 Msa0605250:intron 40.0%
AAGATATGGGCCTTACAAGA+TGG - chr4_2:51033099-51033118 Msa0605250:intron 40.0%
GACTGTTGTTCCATCTTGTA+AGG + chr4_2:51033112-51033131 None:intergenic 40.0%
GATGGAACAACAGTCGTTAT+TGG - chr4_2:51033117-51033136 Msa0605250:intron 40.0%
GAACAACAGTCGTTATTGGA+GGG - chr4_2:51033121-51033140 Msa0605250:intron 40.0%
CAGAGCTAAGTTAGAGTTTC+CGG - chr4_2:51033152-51033171 Msa0605250:intron 40.0%
! GACATTAGAGCTTTGGTATC+TGG + chr4_2:51033497-51033516 None:intergenic 40.0%
!! GCAGTTGATGGTGAATGAGA+GGG + chr4_2:51029642-51029661 None:intergenic 45.0%
!! TGCAGTTGATGGTGAATGAG+AGG + chr4_2:51029643-51029662 None:intergenic 45.0%
TCATCATTCTCCTGTGTGAG+TGG + chr4_2:51029737-51029756 None:intergenic 45.0%
!! TTCTGGTTCTTTGAGCTTGC+TGG + chr4_2:51029779-51029798 None:intergenic 45.0%
GCAAGCTCAAAGAACCAGAA+AGG - chr4_2:51029779-51029798 Msa0605250:three_prime_UTR 45.0%
! GCAGGCACTTTTATTGACCA+AGG - chr4_2:51030663-51030682 Msa0605250:intron 45.0%
AAAACTCAGGTTTCTCGCCT+TGG + chr4_2:51030683-51030702 None:intergenic 45.0%
CCTAACACAGGATGATCTTC+AGG + chr4_2:51030720-51030739 None:intergenic 45.0%
CCTGAAGATCATCCTGTGTT+AGG - chr4_2:51030717-51030736 Msa0605250:intron 45.0%
!! CTATAAGGGAAGCACCAAGA+AGG + chr4_2:51030821-51030840 None:intergenic 45.0%
GCGACATTTCTTGATCACTG+AGG - chr4_2:51030931-51030950 Msa0605250:intron 45.0%
ACGTCTTGGATTGATGCTCT+TGG + chr4_2:51031033-51031052 None:intergenic 45.0%
! AGAGCATCAATCCAAGACGT+CGG - chr4_2:51031033-51031052 Msa0605250:intron 45.0%
! TATGCTTTTCGTGGACTTGC+CGG - chr4_2:51031264-51031283 Msa0605250:CDS 45.0%
TGCTATATGAACGCCAACAG+GGG + chr4_2:51031298-51031317 None:intergenic 45.0%
GTGCTATATGAACGCCAACA+GGG + chr4_2:51031299-51031318 None:intergenic 45.0%
AGTGCTATATGAACGCCAAC+AGG + chr4_2:51031300-51031319 None:intergenic 45.0%
ACAACAAAATTCAGCCCCTG+AGG + chr4_2:51031387-51031406 None:intergenic 45.0%
!! CAGGGGCTGAATTTTGTTGT+AGG - chr4_2:51031387-51031406 Msa0605250:intron 45.0%
CGATCTTTCCCTCTTGAACA+TGG - chr4_2:51031696-51031715 Msa0605250:CDS 45.0%
CTTTCCCTCTTGAACATGGA+TGG - chr4_2:51031700-51031719 Msa0605250:CDS 45.0%
TCACCATATACCAGACGGAT+TGG - chr4_2:51031779-51031798 Msa0605250:CDS 45.0%
ACTCCAATCCGTCTGGTATA+TGG + chr4_2:51031785-51031804 None:intergenic 45.0%
CTGAAATACTCCAATCCGTC+TGG + chr4_2:51031792-51031811 None:intergenic 45.0%
! GGTGCCATAGCCAAGTTATA+AGG + chr4_2:51031844-51031863 None:intergenic 45.0%
GGAGAGTTAACATCTCCAAC+CGG + chr4_2:51031910-51031929 None:intergenic 45.0%
CAAGTCCTAGTCTGTAATGG+CGG + chr4_2:51032433-51032452 None:intergenic 45.0%
! CTGAGCCGTCAATGTTGATT+GGG + chr4_2:51032617-51032636 None:intergenic 45.0%
TCTGAGCCGTCAATGTTGAT+TGG + chr4_2:51032618-51032637 None:intergenic 45.0%
GGAACAACAGTCGTTATTGG+AGG - chr4_2:51033120-51033139 Msa0605250:intron 45.0%
! CAGGGATTTTGTCAAGCAAG+AGG + chr4_2:51033188-51033207 None:intergenic 45.0%
!! GCAGTTGATGGTGAATGAGA+GGG + chr4_2:51029642-51029661 None:intergenic 45.0%
!! TGCAGTTGATGGTGAATGAG+AGG + chr4_2:51029643-51029662 None:intergenic 45.0%
TCATCATTCTCCTGTGTGAG+TGG + chr4_2:51029737-51029756 None:intergenic 45.0%
!! TTCTGGTTCTTTGAGCTTGC+TGG + chr4_2:51029779-51029798 None:intergenic 45.0%
GCAAGCTCAAAGAACCAGAA+AGG - chr4_2:51029779-51029798 Msa0605250:three_prime_UTR 45.0%
! GCAGGCACTTTTATTGACCA+AGG - chr4_2:51030663-51030682 Msa0605250:intron 45.0%
AAAACTCAGGTTTCTCGCCT+TGG + chr4_2:51030683-51030702 None:intergenic 45.0%
CCTAACACAGGATGATCTTC+AGG + chr4_2:51030720-51030739 None:intergenic 45.0%
CCTGAAGATCATCCTGTGTT+AGG - chr4_2:51030717-51030736 Msa0605250:intron 45.0%
!! CTATAAGGGAAGCACCAAGA+AGG + chr4_2:51030821-51030840 None:intergenic 45.0%
GCGACATTTCTTGATCACTG+AGG - chr4_2:51030931-51030950 Msa0605250:intron 45.0%
ACGTCTTGGATTGATGCTCT+TGG + chr4_2:51031033-51031052 None:intergenic 45.0%
! AGAGCATCAATCCAAGACGT+CGG - chr4_2:51031033-51031052 Msa0605250:intron 45.0%
! TATGCTTTTCGTGGACTTGC+CGG - chr4_2:51031264-51031283 Msa0605250:CDS 45.0%
TGCTATATGAACGCCAACAG+GGG + chr4_2:51031298-51031317 None:intergenic 45.0%
GTGCTATATGAACGCCAACA+GGG + chr4_2:51031299-51031318 None:intergenic 45.0%
AGTGCTATATGAACGCCAAC+AGG + chr4_2:51031300-51031319 None:intergenic 45.0%
ACAACAAAATTCAGCCCCTG+AGG + chr4_2:51031387-51031406 None:intergenic 45.0%
!! CAGGGGCTGAATTTTGTTGT+AGG - chr4_2:51031387-51031406 Msa0605250:intron 45.0%
CGATCTTTCCCTCTTGAACA+TGG - chr4_2:51031696-51031715 Msa0605250:CDS 45.0%
CTTTCCCTCTTGAACATGGA+TGG - chr4_2:51031700-51031719 Msa0605250:CDS 45.0%
TCACCATATACCAGACGGAT+TGG - chr4_2:51031779-51031798 Msa0605250:CDS 45.0%
ACTCCAATCCGTCTGGTATA+TGG + chr4_2:51031785-51031804 None:intergenic 45.0%
CTGAAATACTCCAATCCGTC+TGG + chr4_2:51031792-51031811 None:intergenic 45.0%
! GGTGCCATAGCCAAGTTATA+AGG + chr4_2:51031844-51031863 None:intergenic 45.0%
GGAGAGTTAACATCTCCAAC+CGG + chr4_2:51031910-51031929 None:intergenic 45.0%
CAAGTCCTAGTCTGTAATGG+CGG + chr4_2:51032433-51032452 None:intergenic 45.0%
! CTGAGCCGTCAATGTTGATT+GGG + chr4_2:51032617-51032636 None:intergenic 45.0%
TCTGAGCCGTCAATGTTGAT+TGG + chr4_2:51032618-51032637 None:intergenic 45.0%
GGAACAACAGTCGTTATTGG+AGG - chr4_2:51033120-51033139 Msa0605250:intron 45.0%
! CAGGGATTTTGTCAAGCAAG+AGG + chr4_2:51033188-51033207 None:intergenic 45.0%
!!! TTTTAATATATAATTAAACA+TGG + chr4_2:51033052-51033071 None:intergenic 5.0%
!!! TTATTTTTATTTTATTTGAT+AGG - chr4_2:51033470-51033489 Msa0605250:CDS 5.0%
!!! TATTTTTATTTTATTTGATA+GGG - chr4_2:51033471-51033490 Msa0605250:CDS 5.0%
!!! TTTTAATATATAATTAAACA+TGG + chr4_2:51033052-51033071 None:intergenic 5.0%
!!! TTATTTTTATTTTATTTGAT+AGG - chr4_2:51033470-51033489 Msa0605250:CDS 5.0%
!!! TATTTTTATTTTATTTGATA+GGG - chr4_2:51033471-51033490 Msa0605250:CDS 5.0%
TCATTCTCCTGTGTGAGTGG+TGG + chr4_2:51029734-51029753 None:intergenic 50.0%
CCACACCATAAGGACCTTTC+TGG + chr4_2:51029796-51029815 None:intergenic 50.0%
CCAGAAAGGTCCTTATGGTG+TGG - chr4_2:51029793-51029812 Msa0605250:exon 50.0%
CTTGCAATGTTGGCCCTTCT+TGG - chr4_2:51030804-51030823 Msa0605250:intron 50.0%
GTCATTTATGCACTCTGCCG+AGG - chr4_2:51030975-51030994 Msa0605250:intron 50.0%
!! GCACTGCTGTTGATAATGGG+TGG - chr4_2:51031315-51031334 Msa0605250:CDS 50.0%
!! CTGCTGTTGATAATGGGTGG+AGG - chr4_2:51031318-51031337 Msa0605250:CDS 50.0%
GGGTGGAGGAACTTTAAGTG+CGG - chr4_2:51031332-51031351 Msa0605250:CDS 50.0%
GAGGAACTTTAAGTGCGGCA+GGG - chr4_2:51031337-51031356 Msa0605250:CDS 50.0%
!! AGTGCGGCAGGGAGTTTTAA+AGG - chr4_2:51031348-51031367 Msa0605250:CDS 50.0%
GGAAAGGAAAGAAAGCCGGT+AGG + chr4_2:51031426-51031445 None:intergenic 50.0%
AAGGACCGCCATTACAGACT+AGG - chr4_2:51032425-51032444 Msa0605250:intron 50.0%
CGGCTCAGAAATTGTCGTTG+TGG - chr4_2:51032629-51032648 Msa0605250:intron 50.0%
GTGGATGCAATAGGCAGTAG+TGG - chr4_2:51032648-51032667 Msa0605250:intron 50.0%
TGCAATAGGCAGTAGTGGCT+TGG - chr4_2:51032653-51032672 Msa0605250:intron 50.0%
! CAGTAGTGGCTTGGACTTGA+AGG - chr4_2:51032662-51032681 Msa0605250:intron 50.0%
GTGTGAGCTTAAGCCAAGTC+CGG - chr4_2:51032684-51032703 Msa0605250:intron 50.0%
AGCAAGAGGTTCATCTCGTC+CGG + chr4_2:51033174-51033193 None:intergenic 50.0%
TCATTCTCCTGTGTGAGTGG+TGG + chr4_2:51029734-51029753 None:intergenic 50.0%
CCACACCATAAGGACCTTTC+TGG + chr4_2:51029796-51029815 None:intergenic 50.0%
CCAGAAAGGTCCTTATGGTG+TGG - chr4_2:51029793-51029812 Msa0605250:exon 50.0%
CTTGCAATGTTGGCCCTTCT+TGG - chr4_2:51030804-51030823 Msa0605250:intron 50.0%
GTCATTTATGCACTCTGCCG+AGG - chr4_2:51030975-51030994 Msa0605250:intron 50.0%
!! GCACTGCTGTTGATAATGGG+TGG - chr4_2:51031315-51031334 Msa0605250:CDS 50.0%
!! CTGCTGTTGATAATGGGTGG+AGG - chr4_2:51031318-51031337 Msa0605250:CDS 50.0%
GGGTGGAGGAACTTTAAGTG+CGG - chr4_2:51031332-51031351 Msa0605250:CDS 50.0%
GAGGAACTTTAAGTGCGGCA+GGG - chr4_2:51031337-51031356 Msa0605250:CDS 50.0%
!! AGTGCGGCAGGGAGTTTTAA+AGG - chr4_2:51031348-51031367 Msa0605250:CDS 50.0%
GGAAAGGAAAGAAAGCCGGT+AGG + chr4_2:51031426-51031445 None:intergenic 50.0%
AAGGACCGCCATTACAGACT+AGG - chr4_2:51032425-51032444 Msa0605250:intron 50.0%
CGGCTCAGAAATTGTCGTTG+TGG - chr4_2:51032629-51032648 Msa0605250:intron 50.0%
GTGGATGCAATAGGCAGTAG+TGG - chr4_2:51032648-51032667 Msa0605250:intron 50.0%
TGCAATAGGCAGTAGTGGCT+TGG - chr4_2:51032653-51032672 Msa0605250:intron 50.0%
! CAGTAGTGGCTTGGACTTGA+AGG - chr4_2:51032662-51032681 Msa0605250:intron 50.0%
GTGTGAGCTTAAGCCAAGTC+CGG - chr4_2:51032684-51032703 Msa0605250:intron 50.0%
AGCAAGAGGTTCATCTCGTC+CGG + chr4_2:51033174-51033193 None:intergenic 50.0%
TTCTCCACCACCACTCACAC+AGG - chr4_2:51029724-51029743 Msa0605250:three_prime_UTR 55.0%
TTCTCCTGTGTGAGTGGTGG+TGG + chr4_2:51029731-51029750 None:intergenic 55.0%
! CTTTTCGTGGACTTGCCGGT+CGG - chr4_2:51031268-51031287 Msa0605250:CDS 55.0%
GGAGGAACTTTAAGTGCGGC+AGG - chr4_2:51031336-51031355 Msa0605250:CDS 55.0%
AGGTTCAGTCACTGTGCCTC+AGG - chr4_2:51031368-51031387 Msa0605250:CDS 55.0%
GGTTCAGTCACTGTGCCTCA+GGG - chr4_2:51031369-51031388 Msa0605250:intron 55.0%
GTTCAGTCACTGTGCCTCAG+GGG - chr4_2:51031370-51031389 Msa0605250:intron 55.0%
GGAGATGTTCTCGGTCCTAC+CGG - chr4_2:51031408-51031427 Msa0605250:intron 55.0%
GCATATACAACTGGCACGCC+AGG + chr4_2:51032789-51032808 None:intergenic 55.0%
GGCGTGCCAGTTGTATATGC+TGG - chr4_2:51032789-51032808 Msa0605250:intron 55.0%
TTCTCCACCACCACTCACAC+AGG - chr4_2:51029724-51029743 Msa0605250:three_prime_UTR 55.0%
TTCTCCTGTGTGAGTGGTGG+TGG + chr4_2:51029731-51029750 None:intergenic 55.0%
! CTTTTCGTGGACTTGCCGGT+CGG - chr4_2:51031268-51031287 Msa0605250:CDS 55.0%
GGAGGAACTTTAAGTGCGGC+AGG - chr4_2:51031336-51031355 Msa0605250:CDS 55.0%
AGGTTCAGTCACTGTGCCTC+AGG - chr4_2:51031368-51031387 Msa0605250:CDS 55.0%
GGTTCAGTCACTGTGCCTCA+GGG - chr4_2:51031369-51031388 Msa0605250:intron 55.0%
GTTCAGTCACTGTGCCTCAG+GGG - chr4_2:51031370-51031389 Msa0605250:intron 55.0%
GGAGATGTTCTCGGTCCTAC+CGG - chr4_2:51031408-51031427 Msa0605250:intron 55.0%
GCATATACAACTGGCACGCC+AGG + chr4_2:51032789-51032808 None:intergenic 55.0%
GGCGTGCCAGTTGTATATGC+TGG - chr4_2:51032789-51032808 Msa0605250:intron 55.0%
!! GCCAACAGGGGCTAGCCGAC+CGG + chr4_2:51031286-51031305 None:intergenic 70.0%
!! GCCAACAGGGGCTAGCCGAC+CGG + chr4_2:51031286-51031305 None:intergenic 70.0%
! GCCGGTCGGCTAGCCCCTGT+TGG - chr4_2:51031282-51031301 Msa0605250:CDS 75.0%
! GCCGGTCGGCTAGCCCCTGT+TGG - chr4_2:51031282-51031301 Msa0605250:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 51029483 51033583 51029483 ID=Msa0605250;Name=Msa0605250
chr4_2 mRNA 51029483 51033583 51029483 ID=Msa0605250-mRNA-1;Parent=Msa0605250;Name=Msa0605250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=50|1|1|1|0.87|0.77|9|303|548
chr4_2 exon 51029483 51029578 51029483 ID=Msa0605250-mRNA-1:exon:12178;Parent=Msa0605250-mRNA-1
chr4_2 exon 51029599 51029964 51029599 ID=Msa0605250-mRNA-1:exon:12177;Parent=Msa0605250-mRNA-1
chr4_2 exon 51030203 51030286 51030203 ID=Msa0605250-mRNA-1:exon:12176;Parent=Msa0605250-mRNA-1
chr4_2 exon 51030383 51030539 51030383 ID=Msa0605250-mRNA-1:exon:12175;Parent=Msa0605250-mRNA-1
chr4_2 exon 51031122 51031387 51031122 ID=Msa0605250-mRNA-1:exon:12174;Parent=Msa0605250-mRNA-1
chr4_2 exon 51031554 51031826 51031554 ID=Msa0605250-mRNA-1:exon:12173;Parent=Msa0605250-mRNA-1
chr4_2 exon 51031983 51032094 51031983 ID=Msa0605250-mRNA-1:exon:12172;Parent=Msa0605250-mRNA-1
chr4_2 exon 51032180 51032399 51032180 ID=Msa0605250-mRNA-1:exon:12171;Parent=Msa0605250-mRNA-1
chr4_2 exon 51033158 51033583 51033158 ID=Msa0605250-mRNA-1:exon:12170;Parent=Msa0605250-mRNA-1
chr4_2 five_prime_UTR 51033534 51033583 51033534 ID=Msa0605250-mRNA-1:five_prime_utr;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51033158 51033533 51033158 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51032180 51032399 51032180 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51031983 51032094 51031983 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51031554 51031826 51031554 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51031122 51031387 51031122 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51030383 51030539 51030383 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51030203 51030286 51030203 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 CDS 51029806 51029964 51029806 ID=Msa0605250-mRNA-1:cds;Parent=Msa0605250-mRNA-1
chr4_2 three_prime_UTR 51029599 51029805 51029599 ID=Msa0605250-mRNA-1:three_prime_utr;Parent=Msa0605250-mRNA-1
chr4_2 three_prime_UTR 51029483 51029578 51029483 ID=Msa0605250-mRNA-1:three_prime_utr;Parent=Msa0605250-mRNA-1
Gene Sequence

>Msa0605250

ATGTGTCACATGATGTCTTTGAGGACTCCTATGAATCAATGTCTTCTCAAAGTTCCCACTTTTCATCCCTTGTTCAAATTCAACAGAACTCATACTCATAATTACACCCTCTCATTCACCATCAACTGCAACCTCAAAAACAAGGGAAAGAATAATAACTTGTTGTCACAGAAGATTGTTTTATCAGAATCTTCTCCACCACCACTCACACAGGAGAATGATGATATCAACAATGGAAATGTTCCAGCAAGCTCAAAGAACCAGAAAGGTCCTTATGGTGTGGTCAAGAAGTTGAGTAAAAAGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACTATTGCTTTTTTAATGGGTTTGGGCACTTTTATTGACCAAGGCGAGAAACCTGAGTTTTATTTCCAGAATTACCCTGAAGATCATCCTGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCAGCACCTATATTTCTTGCAATGTTGGCCCTTCTTGGTGCTTCCCTTATAGCCTGCACTTACACAACACAACTTCCACTCATCAAGATTTCAAAAAGATGGTCATTTATGCACTCTGCCGAGGTTATACGTAAGCAAGAGTTTTCAGAATCATTGCCAAGAGCATCAATCCAAGACGTCGGTACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCTTTTCGTGGACTTGCCGGTCGGCTAGCCCCTGTTGGCGTTCATATAGCACTGCTGTTGATAATGGGTGGAGGAACTTTAAGTGCGGCAGGGAGTTTTAAAGGTTCAGTCACTGTGCCTCAGGGGCTGAATTTTGTTGTAGGAGATGTTCTCGGTCCTACCGGCTTTCTTTCCTTTCCAACTGATGCATTTAATACAGAGATTCACGTCAACAGATTCTCTATGGATTATTATGAAAGTGGAGAGGTTTCACAGTTTCACACCGATCTTTCCCTCTTGAACATGGATGGAAAAGAAGTAATGAGGAAAACAATTAGTGTAAACGACCCTTTAAGATATGATGGTATCACCATATACCAGACGGATTGGAGTATTTCAGCTCTGCAAATTCTCAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCGGTTGGAGATGTTAACTCTCCTGATGTTAAAGGAATATCTATGCTTGCTCGTGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGACGACCTAATTCAAAGCTCCCAATCAACATTGACGGCTCAGAAATTGTCGTTGTGGATGCAATAGGCAGTAGTGGCTTGGACTTGAAGACTGATCCTGGCGTGCCAGTTGTATATGCTGGATTTGGTGCTCTCATGCTCACTACTTGCATCAGCTATTTATCTCATTCACAGATATGGGCCTTACAAGATGGAACAACAGTCGTTATTGGAGGGAAGACTAACAGAGCTAAGTTAGAGTTTCCGGACGAGATGAACCTCTTGCTTGACAAAATCCCTGAAATAGTTGAATCATCATCTCTATCTAAGAAAACTGATAGCATGGTTAGCTAG

Protein sequence

>Msa0605250

MCHMMSLRTPMNQCLLKVPTFHPLFKFNRTHTHNYTLSFTINCNLKNKGKNNNLLSQKIVLSESSPPPLTQENDDINNGNVPASSKNQKGPYGVVKKLSKKVLQILSNLPLAIGEMFTIAFLMGLGTFIDQGEKPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLAMLALLGASLIACTYTTQLPLIKISKRWSFMHSAEVIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSFPTDAFNTEIHVNRFSMDYYESGEVSQFHTDLSLLNMDGKEVMRKTISVNDPLRYDGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVVVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRAKLEFPDEMNLLLDKIPEIVESSSLSKKTDSMVS*