Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392540 | XP_003598052.1 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392540 | G7J060 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0392540 | 0.813146 | 2.966428e-51 | -8.615850e-47 |
| Msa0012380 | Msa0392540 | 0.887930 | 9.251163e-73 | -8.615850e-47 |
| Msa0014410 | Msa0392540 | 0.811785 | 5.885530e-51 | -8.615850e-47 |
| Msa0024900 | Msa0392540 | 0.803744 | 3.012319e-49 | -8.615850e-47 |
| Msa0034940 | Msa0392540 | 0.831331 | 1.773774e-55 | -8.615850e-47 |
| Msa0037270 | Msa0392540 | 0.801812 | 7.547500e-49 | -8.615850e-47 |
| Msa0040550 | Msa0392540 | -0.834001 | 3.857754e-56 | -8.615850e-47 |
| Msa0040780 | Msa0392540 | 0.831263 | 1.843431e-55 | -8.615850e-47 |
| Msa0044180 | Msa0392540 | 0.837151 | 6.157126e-57 | -8.615850e-47 |
| Msa0057530 | Msa0392540 | 0.815301 | 9.914035e-52 | -8.615850e-47 |
| Msa0061060 | Msa0392540 | 0.830959 | 2.188685e-55 | -8.615850e-47 |
| Msa0064550 | Msa0392540 | 0.850574 | 1.554940e-60 | -8.615850e-47 |
| Msa0072390 | Msa0392540 | 0.824335 | 8.536041e-54 | -8.615850e-47 |
| Msa0072830 | Msa0392540 | 0.821186 | 4.615481e-53 | -8.615850e-47 |
| Msa0072860 | Msa0392540 | 0.818961 | 1.491148e-52 | -8.615850e-47 |
| Msa0081120 | Msa0392540 | 0.816384 | 5.687443e-52 | -8.615850e-47 |
| Msa0081790 | Msa0392540 | 0.804951 | 1.688205e-49 | -8.615850e-47 |
| Msa0089510 | Msa0392540 | 0.845353 | 4.282742e-59 | -8.615850e-47 |
| Msa0089520 | Msa0392540 | 0.845238 | 4.600200e-59 | -8.615850e-47 |
| Msa0090860 | Msa0392540 | 0.813766 | 2.167401e-51 | -8.615850e-47 |
| Msa0091470 | Msa0392540 | 0.851655 | 7.706406e-61 | -8.615850e-47 |
| Msa0105590 | Msa0392540 | 0.802846 | 4.621371e-49 | -8.615850e-47 |
| Msa0108070 | Msa0392540 | 0.816752 | 4.703295e-52 | -8.615850e-47 |
| Msa0109490 | Msa0392540 | 0.814705 | 1.344520e-51 | -8.615850e-47 |
| Msa0114700 | Msa0392540 | 0.835310 | 1.807423e-56 | -8.615850e-47 |
| Msa0130070 | Msa0392540 | 0.842768 | 2.113623e-58 | -8.615850e-47 |
| Msa0140290 | Msa0392540 | 0.852597 | 4.159116e-61 | -8.615850e-47 |
| Msa0154220 | Msa0392540 | 0.840264 | 9.653162e-58 | -8.615850e-47 |
| Msa0154240 | Msa0392540 | 0.852985 | 3.222154e-61 | -8.615850e-47 |
| Msa0154270 | Msa0392540 | 0.863583 | 2.244609e-64 | -8.615850e-47 |
| Msa0157030 | Msa0392540 | 0.805394 | 1.363754e-49 | -8.615850e-47 |
| Msa0163960 | Msa0392540 | 0.811191 | 7.920617e-51 | -8.615850e-47 |
| Msa0171920 | Msa0392540 | 0.843341 | 1.486841e-58 | -8.615850e-47 |
| Msa0175670 | Msa0392540 | 0.853885 | 1.777530e-61 | -8.615850e-47 |
| Msa0175810 | Msa0392540 | 0.821484 | 3.939677e-53 | -8.615850e-47 |
| Msa0178940 | Msa0392540 | 0.809242 | 2.084001e-50 | -8.615850e-47 |
| Msa0183560 | Msa0392540 | 0.809474 | 1.858932e-50 | -8.615850e-47 |
| Msa0187980 | Msa0392540 | 0.800161 | 1.641162e-48 | -8.615850e-47 |
| Msa0197030 | Msa0392540 | 0.889070 | 3.364808e-73 | -8.615850e-47 |
| Msa0198290 | Msa0392540 | 0.813977 | 1.947156e-51 | -8.615850e-47 |
| Msa0199740 | Msa0392540 | 0.858678 | 6.986084e-63 | -8.615850e-47 |
| Msa0202740 | Msa0392540 | 0.802590 | 5.220626e-49 | -8.615850e-47 |
| Msa0216390 | Msa0392540 | 0.804324 | 2.281435e-49 | -8.615850e-47 |
| Msa0224370 | Msa0392540 | 0.809676 | 1.681977e-50 | -8.615850e-47 |
| Msa0224400 | Msa0392540 | 0.821528 | 3.849664e-53 | -8.615850e-47 |
| Msa0233200 | Msa0392540 | 0.822320 | 2.523108e-53 | -8.615850e-47 |
| Msa0369100 | Msa0392540 | 0.811653 | 6.287147e-51 | -8.615850e-47 |
| Msa0373220 | Msa0392540 | 0.835229 | 1.894782e-56 | -8.615850e-47 |
| Msa0380650 | Msa0392540 | 0.838346 | 3.037890e-57 | -8.615850e-47 |
| Msa0382590 | Msa0392540 | 0.835979 | 1.224312e-56 | -8.615850e-47 |
| Msa0387970 | Msa0392540 | 0.892119 | 2.129222e-74 | -8.615850e-47 |
| Msa0392050 | Msa0392540 | 0.895643 | 7.884332e-76 | -8.615850e-47 |
| Msa0392540 | Msa0393880 | 0.826203 | 3.086168e-54 | -8.615850e-47 |
| Msa0392540 | Msa0400060 | -0.840190 | 1.009542e-57 | -8.615850e-47 |
| Msa0392540 | Msa0401340 | 0.829447 | 5.122021e-55 | -8.615850e-47 |
| Msa0392540 | Msa0404060 | 0.808137 | 3.590674e-50 | -8.615850e-47 |
| Msa0392540 | Msa0404070 | 0.847444 | 1.152048e-59 | -8.615850e-47 |
| Msa0392540 | Msa0404690 | 0.805346 | 1.395622e-49 | -8.615850e-47 |
| Msa0392540 | Msa0421720 | 0.830624 | 2.645046e-55 | -8.615850e-47 |
| Msa0392540 | Msa0425320 | 0.850234 | 1.936899e-60 | -8.615850e-47 |
| Msa0392540 | Msa0430290 | 0.838815 | 2.298309e-57 | -8.615850e-47 |
| Msa0392540 | Msa0432720 | 0.842084 | 3.208743e-58 | -8.615850e-47 |
| Msa0392540 | Msa0437550 | 0.829455 | 5.097792e-55 | -8.615850e-47 |
| Msa0392540 | Msa0437790 | 0.810883 | 9.237906e-51 | -8.615850e-47 |
| Msa0392540 | Msa0440310 | 0.973127 | 6.637763e-136 | -8.615850e-47 |
| Msa0392540 | Msa0441670 | 0.828013 | 1.137934e-54 | -8.615850e-47 |
| Msa0392540 | Msa0448120 | 0.813886 | 2.040027e-51 | -8.615850e-47 |
| Msa0392540 | Msa0468020 | 0.832292 | 1.027399e-55 | -8.615850e-47 |
| Msa0392540 | Msa0469950 | 0.895945 | 5.911820e-76 | -8.615850e-47 |
| Msa0392540 | Msa0471760 | 0.854754 | 9.973718e-62 | -8.615850e-47 |
| Msa0392540 | Msa0480430 | 0.838798 | 2.320831e-57 | -8.615850e-47 |
| Msa0392540 | Msa0481490 | 0.857233 | 1.876367e-62 | -8.615850e-47 |
| Msa0392540 | Msa0487490 | 0.922972 | 4.899793e-89 | -8.615850e-47 |
| Msa0392540 | Msa0489330 | 0.821013 | 5.058530e-53 | -8.615850e-47 |
| Msa0392540 | Msa0515460 | 0.852858 | 3.503857e-61 | -8.615850e-47 |
| Msa0392540 | Msa0524830 | 0.812602 | 3.903956e-51 | -8.615850e-47 |
| Msa0392540 | Msa0524960 | 0.848153 | 7.350173e-60 | -8.615850e-47 |
| Msa0392540 | Msa0525270 | 0.881986 | 1.520454e-70 | -8.615850e-47 |
| Msa0392540 | Msa0525280 | 0.879794 | 9.314154e-70 | -8.615850e-47 |
| Msa0392540 | Msa0530340 | 0.865135 | 7.355283e-65 | -8.615850e-47 |
| Msa0392540 | Msa0545230 | 0.834025 | 3.804420e-56 | -8.615850e-47 |
| Msa0392540 | Msa0546080 | 0.813919 | 2.005755e-51 | -8.615850e-47 |
| Msa0392540 | Msa0548210 | 0.902449 | 9.589163e-79 | -8.615850e-47 |
| Msa0392540 | Msa0549540 | 0.900982 | 4.245168e-78 | -8.615850e-47 |
| Msa0392540 | Msa0549760 | 0.836964 | 6.872949e-57 | -8.615850e-47 |
| Msa0392540 | Msa0556070 | 0.858713 | 6.818260e-63 | -8.615850e-47 |
| Msa0392540 | Msa0561420 | 0.800923 | 1.147654e-48 | -8.615850e-47 |
| Msa0392540 | Msa0569930 | 0.801542 | 8.572537e-49 | -8.615850e-47 |
| Msa0392540 | Msa0577050 | 0.858528 | 7.746079e-63 | -8.615850e-47 |
| Msa0392540 | Msa0583740 | 0.807373 | 5.218543e-50 | -8.615850e-47 |
| Msa0392540 | Msa0584280 | 0.803760 | 2.989539e-49 | -8.615850e-47 |
| Msa0392540 | Msa0587250 | 0.805303 | 1.424520e-49 | -8.615850e-47 |
| Msa0392540 | Msa0604880 | 0.889610 | 2.076847e-73 | -8.615850e-47 |
| Msa0392540 | Msa0605250 | 0.867558 | 1.252512e-65 | -8.615850e-47 |
| Msa0392540 | Msa0608780 | 0.849956 | 2.317791e-60 | -8.615850e-47 |
| Msa0392540 | Msa0609790 | 0.834681 | 2.604471e-56 | -8.615850e-47 |
| Msa0392540 | Msa0610780 | 0.805669 | 1.193933e-49 | -8.615850e-47 |
| Msa0392540 | Msa0610810 | 0.806750 | 7.068669e-50 | -8.615850e-47 |
| Msa0392540 | Msa0615430 | 0.804017 | 2.642694e-49 | -8.615850e-47 |
| Msa0392540 | Msa0619390 | 0.827905 | 1.208673e-54 | -8.615850e-47 |
| Msa0392540 | Msa0622250 | 0.891512 | 3.713644e-74 | -8.615850e-47 |
| Msa0392540 | Msa0627050 | 0.886978 | 2.135780e-72 | -8.615850e-47 |
| Msa0392540 | Msa0629820 | 0.801101 | 1.055395e-48 | -8.615850e-47 |
| Msa0392540 | Msa0636720 | 0.839890 | 1.208655e-57 | -8.615850e-47 |
| Msa0392540 | Msa0644630 | 0.897273 | 1.649780e-76 | -8.615850e-47 |
| Msa0392540 | Msa0645410 | 0.811942 | 5.438916e-51 | -8.615850e-47 |
| Msa0392540 | Msa0646190 | 0.889789 | 1.768053e-73 | -8.615850e-47 |
| Msa0392540 | Msa0646340 | 0.859686 | 3.483827e-63 | -8.615850e-47 |
| Msa0392540 | Msa0648560 | 0.803912 | 2.779151e-49 | -8.615850e-47 |
| Msa0392540 | Msa0649250 | 0.839380 | 1.640618e-57 | -8.615850e-47 |
| Msa0392540 | Msa0649310 | 0.815878 | 7.374924e-52 | -8.615850e-47 |
| Msa0392540 | Msa0651310 | 0.821858 | 3.228879e-53 | -8.615850e-47 |
| Msa0392540 | Msa0654880 | 0.825848 | 3.746488e-54 | -8.615850e-47 |
| Msa0392540 | Msa0660070 | 0.836294 | 1.018405e-56 | -8.615850e-47 |
| Msa0392540 | Msa0675010 | 0.829010 | 6.537580e-55 | -8.615850e-47 |
| Msa0392540 | Msa0679780 | 0.807093 | 5.980017e-50 | -8.615850e-47 |
| Msa0392540 | Msa0681210 | 0.822550 | 2.231384e-53 | -8.615850e-47 |
| Msa0392540 | Msa0685890 | 0.868751 | 5.171494e-66 | -8.615850e-47 |
| Msa0392540 | Msa0693400 | 0.832688 | 8.196639e-56 | -8.615850e-47 |
| Msa0392540 | Msa0693500 | 0.826504 | 2.616305e-54 | -8.615850e-47 |
| Msa0392540 | Msa0698650 | 0.817408 | 3.349843e-52 | -8.615850e-47 |
| Msa0392540 | Msa0702360 | 0.811310 | 7.465292e-51 | -8.615850e-47 |
| Msa0392540 | Msa0702560 | 0.819404 | 1.182429e-52 | -8.615850e-47 |
| Msa0392540 | Msa0705810 | 0.848107 | 7.565172e-60 | -8.615850e-47 |
| Msa0392540 | Msa0706130 | 0.816981 | 4.177510e-52 | -8.615850e-47 |
| Msa0392540 | Msa0706450 | 0.826999 | 1.992678e-54 | -8.615850e-47 |
| Msa0392540 | Msa0738280 | 0.801485 | 8.806228e-49 | -8.615850e-47 |
| Msa0392540 | Msa0738410 | -0.831855 | 1.317575e-55 | -8.615850e-47 |
| Msa0392540 | Msa0740210 | 0.812903 | 3.354782e-51 | -8.615850e-47 |
| Msa0392540 | Msa0742090 | 0.826911 | 2.091865e-54 | -8.615850e-47 |
| Msa0392540 | Msa0744690 | 0.804334 | 2.270953e-49 | -8.615850e-47 |
| Msa0392540 | Msa0748330 | 0.885931 | 5.310205e-72 | -8.615850e-47 |
| Msa0392540 | Msa0748980 | 0.802512 | 5.416399e-49 | -8.615850e-47 |
| Msa0392540 | Msa0749150 | 0.838880 | 2.210844e-57 | -8.615850e-47 |
| Msa0392540 | Msa0769830 | 0.800584 | 1.345908e-48 | -8.615850e-47 |
| Msa0392540 | Msa0777500 | -0.821876 | 3.197987e-53 | -8.615850e-47 |
| Msa0392540 | Msa0781390 | 0.839869 | 1.223905e-57 | -8.615850e-47 |
| Msa0392540 | Msa0784840 | -0.806226 | 9.118387e-50 | -8.615850e-47 |
| Msa0392540 | Msa0786100 | 0.812467 | 4.177745e-51 | -8.615850e-47 |
| Msa0392540 | Msa0789800 | 0.800183 | 1.623853e-48 | -8.615850e-47 |
| Msa0392540 | Msa0790640 | 0.817001 | 4.134031e-52 | -8.615850e-47 |
| Msa0392540 | Msa0792880 | 0.823230 | 1.549498e-53 | -8.615850e-47 |
| Msa0392540 | Msa0793100 | 0.853512 | 2.275428e-61 | -8.615850e-47 |
| Msa0392540 | Msa0803530 | 0.805925 | 1.054921e-49 | -8.615850e-47 |
| Msa0392540 | Msa0806720 | 0.866842 | 2.120568e-65 | -8.615850e-47 |
| Msa0392540 | Msa0806760 | 0.867998 | 9.046449e-66 | -8.615850e-47 |
| Msa0392540 | Msa0821030 | 0.802063 | 6.701034e-49 | -8.615850e-47 |
| Msa0392540 | Msa0823310 | 0.800363 | 1.492608e-48 | -8.615850e-47 |
| Msa0392540 | Msa0828900 | 0.827351 | 1.641688e-54 | -8.615850e-47 |
| Msa0392540 | Msa0832270 | 0.800226 | 1.592067e-48 | -8.615850e-47 |
| Msa0392540 | Msa0833630 | 0.801249 | 9.845307e-49 | -8.615850e-47 |
| Msa0392540 | Msa0848760 | 0.800048 | 1.730359e-48 | -8.615850e-47 |
| Msa0392540 | Msa0855090 | -0.820661 | 6.096526e-53 | -8.615850e-47 |
| Msa0392540 | Msa0860920 | 0.820565 | 6.413965e-53 | -8.615850e-47 |
| Msa0392540 | Msa0876270 | 0.840775 | 7.096601e-58 | -8.615850e-47 |
| Msa0392540 | Msa0882700 | 0.840698 | 7.433409e-58 | -8.615850e-47 |
| Msa0392540 | Msa0888900 | 0.812105 | 5.012703e-51 | -8.615850e-47 |
| Msa0392540 | Msa0904630 | 0.820515 | 6.584580e-53 | -8.615850e-47 |
| Msa0392540 | Msa0909720 | 0.858409 | 8.404257e-63 | -8.615850e-47 |
| Msa0392540 | Msa0936650 | 0.806598 | 7.612411e-50 | -8.615850e-47 |
| Msa0392540 | Msa0936690 | 0.810582 | 1.072798e-50 | -8.615850e-47 |
| Msa0392540 | Msa0944690 | 0.865734 | 4.762395e-65 | -8.615850e-47 |
| Msa0392540 | Msa0945960 | 0.864190 | 1.453500e-64 | -8.615850e-47 |
| Msa0392540 | Msa0968780 | 0.846864 | 1.661554e-59 | -8.615850e-47 |
| Msa0392540 | Msa0973890 | 0.818116 | 2.318816e-52 | -8.615850e-47 |
| Msa0392540 | Msa0980980 | 0.820661 | 6.095484e-53 | -8.615850e-47 |
| Msa0392540 | Msa0984000 | 0.878734 | 2.208688e-69 | -8.615850e-47 |
| Msa0392540 | Msa1014700 | 0.833328 | 5.682181e-56 | -8.615850e-47 |
| Msa0392540 | Msa1034930 | 0.884313 | 2.134070e-71 | -8.615850e-47 |
| Msa0392540 | Msa1036250 | 0.821904 | 3.150092e-53 | -8.615850e-47 |
| Msa0392540 | Msa1069960 | 0.814168 | 1.767676e-51 | -8.615850e-47 |
| Msa0392540 | Msa1074980 | 0.828228 | 1.010020e-54 | -8.615850e-47 |
| Msa0392540 | Msa1076520 | 0.838389 | 2.960556e-57 | -8.615850e-47 |
| Msa0392540 | Msa1078600 | 0.826106 | 3.254011e-54 | -8.615850e-47 |
| Msa0392540 | Msa1078770 | 0.821789 | 3.350265e-53 | -8.615850e-47 |
| Msa0392540 | Msa1079480 | 0.813519 | 2.456859e-51 | -8.615850e-47 |
| Msa0392540 | Msa1082150 | 0.885531 | 7.507259e-72 | -8.615850e-47 |
| Msa0392540 | Msa1083140 | 0.802685 | 4.988695e-49 | -8.615850e-47 |
| Msa0392540 | Msa1115830 | 0.825659 | 4.154947e-54 | -8.615850e-47 |
| Msa0392540 | Msa1118460 | 0.838475 | 2.813652e-57 | -8.615850e-47 |
| Msa0392540 | Msa1119860 | 0.810370 | 1.192199e-50 | -8.615850e-47 |
| Msa0392540 | Msa1122720 | 0.805913 | 1.060973e-49 | -8.615850e-47 |
| Msa0392540 | Msa1127900 | 0.807422 | 5.093125e-50 | -8.615850e-47 |
| Msa0392540 | Msa1144730 | 0.895191 | 1.211086e-75 | -8.615850e-47 |
| Msa0392540 | Msa1144950 | 0.802587 | 5.227281e-49 | -8.615850e-47 |
| Msa0392540 | Msa1157030 | 0.809938 | 1.477480e-50 | -8.615850e-47 |
| Msa0392540 | Msa1162330 | 0.846383 | 2.247958e-59 | -8.615850e-47 |
| Msa0392540 | Msa1165810 | 0.805566 | 1.254715e-49 | -8.615850e-47 |
| Msa0392540 | Msa1169600 | 0.800049 | 1.729128e-48 | -8.615850e-47 |
| Msa0392540 | Msa1173380 | 0.865143 | 7.310762e-65 | -8.615850e-47 |
| Msa0392540 | Msa1177240 | 0.813470 | 2.517934e-51 | -8.615850e-47 |
| Msa0392540 | Msa1180050 | 0.815422 | 9.322251e-52 | -8.615850e-47 |
| Msa0392540 | Msa1181510 | 0.845463 | 3.997348e-59 | -8.615850e-47 |
| Msa0392540 | Msa1182800 | 0.834789 | 2.446195e-56 | -8.615850e-47 |
| Msa0392540 | Msa1184010 | 0.866723 | 2.314992e-65 | -8.615850e-47 |
| Msa0392540 | Msa1191960 | 0.804390 | 2.210510e-49 | -8.615850e-47 |
| Msa0392540 | Msa1219060 | 0.812822 | 3.494594e-51 | -8.615850e-47 |
| Msa0392540 | Msa1224820 | 0.823160 | 1.608579e-53 | -8.615850e-47 |
| Msa0392540 | Msa1226880 | 0.832162 | 1.106205e-55 | -8.615850e-47 |
| Msa0392540 | Msa1228350 | 0.857971 | 1.134195e-62 | -8.615850e-47 |
| Msa0392540 | Msa1228460 | 0.841796 | 3.824000e-58 | -8.615850e-47 |
| Msa0392540 | Msa1232270 | 0.807094 | 5.976910e-50 | -8.615850e-47 |
| Msa0392540 | Msa1239900 | 0.851924 | 6.465033e-61 | -8.615850e-47 |
| Msa0392540 | Msa1243730 | 0.800059 | 1.721628e-48 | -8.615850e-47 |
| Msa0392540 | Msa1255020 | 0.835805 | 1.354944e-56 | -8.615850e-47 |
| Msa0392540 | Msa1270770 | 0.809798 | 1.583785e-50 | -8.615850e-47 |
| Msa0392540 | Msa1281270 | 0.854444 | 1.225958e-61 | -8.615850e-47 |
| Msa0392540 | Msa1288970 | 0.807608 | 4.652514e-50 | -8.615850e-47 |
| Msa0392540 | Msa1293050 | 0.801482 | 8.818315e-49 | -8.615850e-47 |
| Msa0392540 | Msa1295470 | 0.826644 | 2.422454e-54 | -8.615850e-47 |
| Msa0392540 | Msa1317030 | 0.806866 | 6.679624e-50 | -8.615850e-47 |
| Msa0392540 | Msa1318180 | 0.816935 | 4.279294e-52 | -8.615850e-47 |
| Msa0392540 | Msa1320380 | 0.854599 | 1.105856e-61 | -8.615850e-47 |
| Msa0392540 | Msa1338590 | 0.804836 | 1.783753e-49 | -8.615850e-47 |
| Msa0392540 | Msa1340540 | 0.803595 | 3.234598e-49 | -8.615850e-47 |
| Msa0392540 | Msa1343450 | 0.812847 | 3.449379e-51 | -8.615850e-47 |
| Msa0392540 | Msa1349810 | 0.862546 | 4.693752e-64 | -8.615850e-47 |
| Msa0392540 | Msa1354090 | 0.827831 | 1.259138e-54 | -8.615850e-47 |
| Msa0392540 | Msa1358340 | 0.890602 | 8.492050e-74 | -8.615850e-47 |
| Msa0392540 | Msa1359890 | 0.896053 | 5.331741e-76 | -8.615850e-47 |
| Msa0392540 | Msa1369180 | 0.843685 | 1.203333e-58 | -8.615850e-47 |
| Msa0392540 | Msa1373390 | 0.817688 | 2.896540e-52 | -8.615850e-47 |
| Msa0392540 | Msa1375780 | 0.826221 | 3.055983e-54 | -8.615850e-47 |
| Msa0392540 | Msa1380720 | 0.815947 | 7.119686e-52 | -8.615850e-47 |
| Msa0392540 | Msa1387480 | -0.801170 | 1.021554e-48 | -8.615850e-47 |
| Msa0392540 | Msa1393550 | 0.800838 | 1.194261e-48 | -8.615850e-47 |
| Msa0392540 | Msa1394900 | 0.856779 | 2.553761e-62 | -8.615850e-47 |
| Msa0392540 | Msa1404690 | 0.857759 | 1.311086e-62 | -8.615850e-47 |
| Msa0392540 | Msa1405380 | 0.863476 | 2.422081e-64 | -8.615850e-47 |
| Msa0392540 | Msa1406020 | 0.891386 | 4.166361e-74 | -8.615850e-47 |
| Msa0392540 | Msa1426310 | 0.801471 | 8.863787e-49 | -8.615850e-47 |
| Msa0392540 | Msa1434660 | 0.842066 | 3.243879e-58 | -8.615850e-47 |
| Msa0392540 | Msa1443550 | 0.806231 | 9.093866e-50 | -8.615850e-47 |
| Msa0392540 | Msa1452560 | 0.810996 | 8.729447e-51 | -8.615850e-47 |
| Msa0392540 | Msa1456620 | 0.852527 | 4.354508e-61 | -8.615850e-47 |
| Msa0392540 | Msa1459540 | 0.847326 | 1.241450e-59 | -8.615850e-47 |
| Msa0392540 | Msa1462600 | 0.834708 | 2.564373e-56 | -8.615850e-47 |
| Msa0392540 | Msa1466130 | -0.810567 | 1.080783e-50 | -8.615850e-47 |
| Msa0392540 | Msa1466350 | 0.816378 | 5.704350e-52 | -8.615850e-47 |
| Msa0238860 | Msa0392540 | 0.861575 | 9.314739e-64 | -8.615850e-47 |
| Msa0240640 | Msa0392540 | 0.869027 | 4.210979e-66 | -8.615850e-47 |
| Msa0242290 | Msa0392540 | 0.834245 | 3.349970e-56 | -8.615850e-47 |
| Msa0253160 | Msa0392540 | 0.853590 | 2.160813e-61 | -8.615850e-47 |
| Msa0258700 | Msa0392540 | -0.811701 | 6.137115e-51 | -8.615850e-47 |
| Msa0265580 | Msa0392540 | 0.813256 | 2.806947e-51 | -8.615850e-47 |
| Msa0276590 | Msa0392540 | 0.856968 | 2.246463e-62 | -8.615850e-47 |
| Msa0280500 | Msa0392540 | 0.815416 | 9.348023e-52 | -8.615850e-47 |
| Msa0291940 | Msa0392540 | 0.851265 | 9.930243e-61 | -8.615850e-47 |
| Msa0295570 | Msa0392540 | 0.801235 | 9.907826e-49 | -8.615850e-47 |
| Msa0297370 | Msa0392540 | -0.805438 | 1.335038e-49 | -8.615850e-47 |
| Msa0297950 | Msa0392540 | -0.806242 | 9.046254e-50 | -8.615850e-47 |
| Msa0303440 | Msa0392540 | 0.833621 | 4.800664e-56 | -8.615850e-47 |
| Msa0303500 | Msa0392540 | 0.812551 | 4.005543e-51 | -8.615850e-47 |
| Msa0306160 | Msa0392540 | 0.859426 | 4.169126e-63 | -8.615850e-47 |
| Msa0316610 | Msa0392540 | 0.844827 | 5.938269e-59 | -8.615850e-47 |
| Msa0319710 | Msa0392540 | 0.836615 | 8.434544e-57 | -8.615850e-47 |
| Msa0334280 | Msa0392540 | 0.805292 | 1.432572e-49 | -8.615850e-47 |
| Msa0335890 | Msa0392540 | -0.805019 | 1.633808e-49 | -8.615850e-47 |
| Msa0344680 | Msa0392540 | 0.898609 | 4.487177e-77 | -8.615850e-47 |
| Msa0346790 | Msa0392540 | 0.937784 | 1.972060e-98 | -8.615850e-47 |
| Msa0347280 | Msa0392540 | 0.816333 | 5.838076e-52 | -8.615850e-47 |
| Msa0353040 | Msa0392540 | -0.832793 | 7.719194e-56 | -8.615850e-47 |
| Msa0354390 | Msa0392540 | 0.807537 | 4.816254e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392540 | MtrunA17_Chr3g0077631 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Msa0392540 | MtrunA17_Chr1g0178631 | 39.819 | 221 | 125 | 4 | 104 | 321 | 119 | 334 | 3.37e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392540 | AT4G10000.1 | 69.286 | 280 | 85 | 1 | 43 | 322 | 51 | 329 | 2.11e-145 | 413 |
| Msa0392540 | AT4G10000.2 | 69.286 | 280 | 85 | 1 | 43 | 322 | 51 | 329 | 2.11e-145 | 413 |
| Msa0392540 | AT5G03880.1 | 42.534 | 221 | 120 | 4 | 103 | 322 | 125 | 339 | 3.79e-54 | 180 |
Find 79 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAAATTCTTACTTCTT+TGG | 0.175708 | 3_2:+5751449 | None:intergenic |
| TCCCGTACCCTTCTACAAAA+AGG | 0.249924 | 3_2:+5754120 | None:intergenic |
| TGACATTGTGGGAACGTTCT+AGG | 0.276954 | 3_2:-5752152 | Msa0392540:CDS |
| AAAGAACTGATTATTCAAAA+TGG | 0.284949 | 3_2:-5750808 | Msa0392540:three_prime_UTR |
| GAGAACAGCTCCAGCTTTCT+AGG | 0.290385 | 3_2:+5752117 | None:intergenic |
| AAGTTACTCTTGGATGCTTC+TGG | 0.294502 | 3_2:-5751474 | Msa0392540:CDS |
| GCAAAATTACGTTGTCTAGA+AGG | 0.342024 | 3_2:+5756197 | None:intergenic |
| CTGTGTCTTACAGAACCTTT+AGG | 0.352920 | 3_2:+5753639 | None:intergenic |
| GAATAGGTTTCGAACAAATA+AGG | 0.364256 | 3_2:+5750964 | None:intergenic |
| AAAATTTCGTTTGAAGAAAG+TGG | 0.378378 | 3_2:+5750922 | None:intergenic |
| TAGGTTTATCCTTGTCCTAA+AGG | 0.380454 | 3_2:-5753654 | Msa0392540:CDS |
| CTATAAATTATCCGACGAAT+AGG | 0.383781 | 3_2:+5750948 | None:intergenic |
| AAATACTTGTTCGAGCGATA+TGG | 0.384640 | 3_2:-5752353 | Msa0392540:CDS |
| AGAGAGGTGGTCAGAGAAAC+TGG | 0.386180 | 3_2:-5753618 | Msa0392540:CDS |
| ACAACTTTAAATAGCCTTTG+TGG | 0.397151 | 3_2:+5750883 | None:intergenic |
| CTACCTGCTCGTAGAATTGT+TGG | 0.397799 | 3_2:+5752180 | None:intergenic |
| TTCCTCATTGATCAAAATAG+TGG | 0.408697 | 3_2:-5752940 | Msa0392540:CDS |
| TTACTTACTGCTTTCATACA+TGG | 0.414336 | 3_2:+5752912 | None:intergenic |
| TTGAGTTTAAGACTTGGAAT+TGG | 0.425401 | 3_2:+5756572 | None:intergenic |
| TTGAAAGTGCATCGAGTAAA+GGG | 0.440724 | 3_2:-5754530 | Msa0392540:CDS |
| CACAACACTGGATTTCAATC+TGG | 0.442131 | 3_2:-5751006 | Msa0392540:CDS |
| CCTTACATTCTTCAAAATGT+AGG | 0.449859 | 3_2:-5751516 | Msa0392540:CDS |
| AGAAGGGAGAAGTCCATCAT+TGG | 0.461743 | 3_2:-5752330 | Msa0392540:CDS |
| GCGTGAGGCATTATGCGAAT+TGG | 0.471814 | 3_2:-5751544 | Msa0392540:CDS |
| GGGACAGAGAAAGGAGAGAA+AGG | 0.477524 | 3_2:+5756457 | None:intergenic |
| AAGACTTGGAATTGGTATGC+TGG | 0.478696 | 3_2:+5756580 | None:intergenic |
| GACATTGTGGGAACGTTCTA+GGG | 0.479537 | 3_2:-5752151 | Msa0392540:CDS |
| ATTGAAAGTGCATCGAGTAA+AGG | 0.482082 | 3_2:-5754531 | Msa0392540:CDS |
| GGAAGGAGTTGAACTTGAAG+TGG | 0.485002 | 3_2:+5756481 | None:intergenic |
| CTTGAGCAAGGGACAGAGAA+AGG | 0.496483 | 3_2:+5756448 | None:intergenic |
| AGAAAGGAGAGAAAGGAGGA+AGG | 0.497341 | 3_2:+5756464 | None:intergenic |
| CCATGCAAACCTTGATGTGC+TGG | 0.497874 | 3_2:+5754569 | None:intergenic |
| AGCTCCAGCTTTCTAGGAGG+AGG | 0.503068 | 3_2:+5752123 | None:intergenic |
| CTCTCTAAAAGTCCCAATGA+TGG | 0.508740 | 3_2:+5752317 | None:intergenic |
| GTTATGCCGTAGAGAGTGTT+GGG | 0.510011 | 3_2:+5756608 | None:intergenic |
| CTTCCTTGGCCAGCACATCA+AGG | 0.515024 | 3_2:-5754578 | Msa0392540:CDS |
| ATAGCTAGCAACATCTTCCT+TGG | 0.515786 | 3_2:-5754592 | Msa0392540:intron |
| GAAGGGAGAAGTCCATCATT+GGG | 0.519221 | 3_2:-5752329 | Msa0392540:CDS |
| CCAGCACATCAAGGTTTGCA+TGG | 0.519241 | 3_2:-5754569 | Msa0392540:CDS |
| TACTTTGTTGATCACAACAC+TGG | 0.521271 | 3_2:-5751018 | Msa0392540:CDS |
| ACGACGAACGAAGTTACTCT+TGG | 0.522523 | 3_2:-5751484 | Msa0392540:CDS |
| ATTCTTCAAAATGTAGGAGA+AGG | 0.523180 | 3_2:-5751510 | Msa0392540:CDS |
| TGAACCTCCTCCTAGAAAGC+TGG | 0.527393 | 3_2:-5752127 | Msa0392540:CDS |
| GTGTTGTGATCAACAAAGTA+AGG | 0.529816 | 3_2:+5751021 | None:intergenic |
| TTGTTCGAGCGATATGGAGA+AGG | 0.531686 | 3_2:-5752347 | Msa0392540:CDS |
| CAGCACATCAAGGTTTGCAT+GGG | 0.532656 | 3_2:-5754568 | Msa0392540:CDS |
| TTGCGCAGCACTATCTTCAC+TGG | 0.541182 | 3_2:-5752210 | Msa0392540:intron |
| AGACTTGGAATTGGTATGCT+GGG | 0.545385 | 3_2:+5756581 | None:intergenic |
| ACAATTCTACGAGCAGGTAG+AGG | 0.551144 | 3_2:-5752177 | Msa0392540:CDS |
| TACAGAGAAAAGCTTGAGCA+AGG | 0.557845 | 3_2:+5756436 | None:intergenic |
| ACAGAGAAAGGAGAGAAAGG+AGG | 0.558500 | 3_2:+5756460 | None:intergenic |
| TCAGTTCCCAACACTCTCTA+CGG | 0.566588 | 3_2:-5756614 | Msa0392540:CDS |
| AGGTAGAGGAATGACATTGT+GGG | 0.575168 | 3_2:-5752163 | Msa0392540:CDS |
| ATGCCAACAATTCTACGAGC+AGG | 0.576106 | 3_2:-5752183 | Msa0392540:CDS |
| AGTTATGCCGTAGAGAGTGT+TGG | 0.576277 | 3_2:+5756607 | None:intergenic |
| TTTGTTCGAAACCTATTCGT+CGG | 0.576535 | 3_2:-5750959 | Msa0392540:CDS |
| CTTACAGAACCTTTAGGACA+AGG | 0.591800 | 3_2:+5753645 | None:intergenic |
| TGAACTAGATCTTTCTGTCG+AGG | 0.600096 | 3_2:-5754088 | Msa0392540:intron |
| AAAAGCTGCAAACTAATAGG+AGG | 0.603920 | 3_2:+5754495 | None:intergenic |
| CTGAGCATGAGTTGGTGCAG+TGG | 0.606372 | 3_2:+5756633 | None:intergenic |
| AGAAAGATCTAGTTCAGTCA+TGG | 0.609780 | 3_2:+5754095 | None:intergenic |
| GAACTTGAAGTGGATTGTTG+TGG | 0.611246 | 3_2:+5756491 | None:intergenic |
| ACAGAGAAAAGCTTGAGCAA+GGG | 0.611657 | 3_2:+5756437 | None:intergenic |
| GTTCTTTCAAATCACCACAA+AGG | 0.613186 | 3_2:-5750897 | Msa0392540:three_prime_UTR |
| TATGTGATGAACAAAATCAC+AGG | 0.614486 | 3_2:-5750855 | Msa0392540:three_prime_UTR |
| TGTTCGAGCGATATGGAGAA+GGG | 0.616808 | 3_2:-5752346 | Msa0392540:CDS |
| TTGCATTTGAGTTTAAGACT+TGG | 0.618819 | 3_2:+5756566 | None:intergenic |
| GCATGAGTTGGTGCAGTGGA+AGG | 0.619413 | 3_2:+5756637 | None:intergenic |
| AAACCTTGATGTGCTGGCCA+AGG | 0.622161 | 3_2:+5754575 | None:intergenic |
| GTTGGGAACTGAGCATGAGT+TGG | 0.626839 | 3_2:+5756625 | None:intergenic |
| CAGGTAGAGGAATGACATTG+TGG | 0.629598 | 3_2:-5752164 | Msa0392540:CDS |
| GAATGCTCGTATTGTGCGTG+AGG | 0.629611 | 3_2:-5751559 | Msa0392540:CDS |
| AACAGCTCCAGCTTTCTAGG+AGG | 0.635879 | 3_2:+5752120 | None:intergenic |
| GCAGCACTATCTTCACTGGA+TGG | 0.651360 | 3_2:-5752206 | Msa0392540:intron |
| TTCTGTAAGACACAGAGAGG+TGG | 0.659198 | 3_2:-5753631 | Msa0392540:CDS |
| GTTCTCCTATGAAAATAACC+CGG | 0.677731 | 3_2:-5752100 | Msa0392540:intron |
| AGCACATCAAGGTTTGCATG+GGG | 0.694844 | 3_2:-5754567 | Msa0392540:CDS |
| AGGTTCTGTAAGACACAGAG+AGG | 0.695163 | 3_2:-5753634 | Msa0392540:CDS |
| GAGGTGGTCAGAGAAACTGG+TGG | 0.779819 | 3_2:-5753615 | Msa0392540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTACTAATTAATTTAATT+TGG | + | chr3_2:5751060-5751079 | None:intergenic | 10.0% |
| !! | AGTAAAATGTTAAATATATA+AGG | - | chr3_2:5751345-5751364 | Msa0392540:intron | 10.0% |
| !! | GTAAAATGTTAAATATATAA+GGG | - | chr3_2:5751346-5751365 | Msa0392540:intron | 10.0% |
| !!! | AAATGTTTTATAAAAACTAT+AGG | - | chr3_2:5752732-5752751 | Msa0392540:intron | 10.0% |
| !!! | TATATTTTCTCAAATTATTA+CGG | + | chr3_2:5753554-5753573 | None:intergenic | 10.0% |
| !!! | ACAAAATATTTTAAAAGATA+AGG | + | chr3_2:5754423-5754442 | None:intergenic | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | + | chr3_2:5754808-5754827 | None:intergenic | 10.0% |
| !! | ATTAGTTAAAATCATTAAAA+TGG | + | chr3_2:5754999-5755018 | None:intergenic | 10.0% |
| !!! | AATTTTGAATCTGTTAATAT+TGG | + | chr3_2:5750889-5750908 | None:intergenic | 15.0% |
| !!! | TACTAATTAATTTAATTTGG+TGG | + | chr3_2:5751057-5751076 | None:intergenic | 15.0% |
| !! | AATTTCTTAGATTGTTAAAA+GGG | + | chr3_2:5751272-5751291 | None:intergenic | 15.0% |
| !! | AAATTTCTTAGATTGTTAAA+AGG | + | chr3_2:5751273-5751292 | None:intergenic | 15.0% |
| !!! | CTAAGAAATTTTATTTTGTA+AGG | - | chr3_2:5751282-5751301 | Msa0392540:intron | 15.0% |
| !! | TGTTGTTGTATATTAAAATA+TGG | - | chr3_2:5752025-5752044 | Msa0392540:intron | 15.0% |
| !! | CTTTAATTAAAATCGTAAAA+GGG | + | chr3_2:5752115-5752134 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTAAATACTATTT+TGG | - | chr3_2:5752130-5752149 | Msa0392540:CDS | 15.0% |
| !! | AAAAGAAATAAATTAACTTC+TGG | + | chr3_2:5753069-5753088 | None:intergenic | 15.0% |
| !! | ATAGTATGAAAGATTTAAAA+AGG | + | chr3_2:5753269-5753288 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+GGG | + | chr3_2:5753553-5753572 | None:intergenic | 15.0% |
| !! | TTTGAGAAAATATAAGTAAT+TGG | - | chr3_2:5753560-5753579 | Msa0392540:intron | 15.0% |
| !!! | CAATAAAATTCTTTTGAAAT+TGG | + | chr3_2:5753663-5753682 | None:intergenic | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | + | chr3_2:5754748-5754767 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGAATGAAT+CGG | - | chr3_2:5755431-5755450 | Msa0392540:intron | 15.0% |
| !! | AATAATTGTTGAATAATACT+TGG | - | chr3_2:5756279-5756298 | Msa0392540:intron | 15.0% |
| !!! | TTCTCATCTAATGATTTTAT+TGG | - | chr3_2:5751195-5751214 | Msa0392540:intron | 20.0% |
| !! | CCTTTAATTAAAATCGTAAA+AGG | + | chr3_2:5752116-5752135 | None:intergenic | 20.0% |
| !!! | CCTTTTACGATTTTAATTAA+AGG | - | chr3_2:5752113-5752132 | Msa0392540:CDS | 20.0% |
| !! | TAGTATTAAAATGTATAGCT+GGG | + | chr3_2:5752215-5752234 | None:intergenic | 20.0% |
| !! | TTAGTATTAAAATGTATAGC+TGG | + | chr3_2:5752216-5752235 | None:intergenic | 20.0% |
| !!! | AATACTAAATTTTGATGATG+TGG | - | chr3_2:5752228-5752247 | Msa0392540:intron | 20.0% |
| !! | AAGTCTTAATAACTAGTTAT+TGG | - | chr3_2:5752554-5752573 | Msa0392540:intron | 20.0% |
| !!! | TATAGGAAGAATGAATTTTT+TGG | - | chr3_2:5752749-5752768 | Msa0392540:intron | 20.0% |
| !!! | GCAAATGTTTTAGAATATTT+TGG | + | chr3_2:5752775-5752794 | None:intergenic | 20.0% |
| !! | AAGAAGAATACAAAAAATGT+TGG | + | chr3_2:5753017-5753036 | None:intergenic | 20.0% |
| !!! | AAAAACAAAAGCTGTTTTTT+TGG | - | chr3_2:5753927-5753946 | Msa0392540:intron | 20.0% |
| !!! | AAAACAAAAGCTGTTTTTTT+GGG | - | chr3_2:5753928-5753947 | Msa0392540:intron | 20.0% |
| !! | AGAGATAAGAAAAAAGATAA+AGG | - | chr3_2:5753991-5754010 | Msa0392540:intron | 20.0% |
| !! | GAGATAAGAAAAAAGATAAA+GGG | - | chr3_2:5753992-5754011 | Msa0392540:intron | 20.0% |
| !! | CAATATAAGTAGAAAGAATA+AGG | + | chr3_2:5754556-5754575 | None:intergenic | 20.0% |
| !! | TTTCTACTTATATTGTTTAG+TGG | - | chr3_2:5754561-5754580 | Msa0392540:CDS | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | + | chr3_2:5754775-5754794 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | - | chr3_2:5754811-5754830 | Msa0392540:intron | 20.0% |
| !! | AATGTGAAATGATTTATGAT+TGG | - | chr3_2:5755459-5755478 | Msa0392540:intron | 20.0% |
| !! | CAAATAAATTCTTACTTCTT+TGG | + | chr3_2:5755981-5756000 | None:intergenic | 20.0% |
| !! | TGGTTCAATTTCAATAAAAA+AGG | + | chr3_2:5756220-5756239 | None:intergenic | 20.0% |
| !!! | TTTAGTTCTTCTAAAATGAA+TGG | + | chr3_2:5756240-5756259 | None:intergenic | 20.0% |
| !! | CAACAATTATTAAACATAAC+TGG | + | chr3_2:5756270-5756289 | None:intergenic | 20.0% |
| !! | AAAGAACTGATTATTCAAAA+TGG | - | chr3_2:5756619-5756638 | Msa0392540:CDS | 20.0% |
| !! | ATCTAATGATTTTATTGGCA+GGG | - | chr3_2:5751200-5751219 | Msa0392540:intron | 25.0% |
| !! | GAAATGTTTCTACAAATGAA+TGG | - | chr3_2:5751513-5751532 | Msa0392540:CDS | 25.0% |
| ! | ATGAAGTATATGTTAAAACC+CGG | - | chr3_2:5751595-5751614 | Msa0392540:intron | 25.0% |
| ! | GAAGACATAGAAAAACTATT+TGG | - | chr3_2:5751894-5751913 | Msa0392540:intron | 25.0% |
| ! | TGTCTATCATAAACCATATT+TGG | + | chr3_2:5751947-5751966 | None:intergenic | 25.0% |
| ! | ATGGTTTATGATAGACATTA+TGG | - | chr3_2:5751950-5751969 | Msa0392540:intron | 25.0% |
| ! | AGAGAGGTTACAAAAAAATT+GGG | + | chr3_2:5752085-5752104 | None:intergenic | 25.0% |
| ! | AAGAGAGGTTACAAAAAAAT+TGG | + | chr3_2:5752086-5752105 | None:intergenic | 25.0% |
| !! | AGTCTATTTTGTATGGATTT+TGG | - | chr3_2:5752155-5752174 | Msa0392540:CDS | 25.0% |
| ! | TAATGTATATCTCGATGAAA+TGG | + | chr3_2:5752333-5752352 | None:intergenic | 25.0% |
| ! | ATATCAATAGCACTACAAAA+GGG | + | chr3_2:5752616-5752635 | None:intergenic | 25.0% |
| ! | AATATCAATAGCACTACAAA+AGG | + | chr3_2:5752617-5752636 | None:intergenic | 25.0% |
| !! | TTTTTCTGAATATGAACTAC+TGG | - | chr3_2:5752637-5752656 | Msa0392540:intron | 25.0% |
| !! | GAGAATCTTAGTTTGAATAA+AGG | + | chr3_2:5753175-5753194 | None:intergenic | 25.0% |
| ! | GTTTCATACTTAATAGCATA+AGG | + | chr3_2:5753485-5753504 | None:intergenic | 25.0% |
| !! | AATGATTTATGGTTGACTTA+TGG | - | chr3_2:5753710-5753729 | Msa0392540:intron | 25.0% |
| ! | ACCAACAGTAGTAATATTAA+GGG | + | chr3_2:5753745-5753764 | None:intergenic | 25.0% |
| !!! | AAACAAAAGCTGTTTTTTTG+GGG | - | chr3_2:5753929-5753948 | Msa0392540:intron | 25.0% |
| !!! | TATCTTTTTTCTTATCTCTC+TGG | + | chr3_2:5753990-5754009 | None:intergenic | 25.0% |
| !!! | ATTCCATCACAAAGTATTTT+TGG | + | chr3_2:5754059-5754078 | None:intergenic | 25.0% |
| !! | AAAAATACTTTGTGATGGAA+TGG | - | chr3_2:5754058-5754077 | Msa0392540:intron | 25.0% |
| ! | TGGATTTAAATGGAATAGAA+CGG | - | chr3_2:5754083-5754102 | Msa0392540:intron | 25.0% |
| !!! | TAGTTAGAATGGCTATTTTT+GGG | + | chr3_2:5754225-5754244 | None:intergenic | 25.0% |
| !!! | TTAGTTAGAATGGCTATTTT+TGG | + | chr3_2:5754226-5754245 | None:intergenic | 25.0% |
| ! | ATTCTAACTAACTATTCTCA+GGG | - | chr3_2:5754235-5754254 | Msa0392540:intron | 25.0% |
| !! | ATTTTCAACATACTCATTCT+TGG | - | chr3_2:5754384-5754403 | Msa0392540:intron | 25.0% |
| ! | GTAAACAACTATGAAAATGA+AGG | + | chr3_2:5754602-5754621 | None:intergenic | 25.0% |
| ! | TTCATAGTTGTTTACTAGTT+TGG | - | chr3_2:5754607-5754626 | Msa0392540:intron | 25.0% |
| ! | TCATTAAAATGGACCATTAA+GGG | + | chr3_2:5754988-5755007 | None:intergenic | 25.0% |
| ! | ATCATTAAAATGGACCATTA+AGG | + | chr3_2:5754989-5755008 | None:intergenic | 25.0% |
| !!! | TAGAGAGGTATACATATTTT+AGG | - | chr3_2:5755126-5755145 | Msa0392540:intron | 25.0% |
| !!! | AGAGAGGTATACATATTTTA+GGG | - | chr3_2:5755127-5755146 | Msa0392540:intron | 25.0% |
| ! | ATAGAAGAACATTATCTTAC+CGG | + | chr3_2:5755349-5755368 | None:intergenic | 25.0% |
| ! | TTGAGTGTAAAAATCACATT+TGG | - | chr3_2:5755510-5755529 | Msa0392540:intron | 25.0% |
| !!! | ATGCATTTGATTTGTAACAA+TGG | - | chr3_2:5755702-5755721 | Msa0392540:intron | 25.0% |
| !!! | TGCATTTGATTTGTAACAAT+GGG | - | chr3_2:5755703-5755722 | Msa0392540:intron | 25.0% |
| !!! | AAGATTTGCTATAATTGTCA+TGG | - | chr3_2:5755744-5755763 | Msa0392540:intron | 25.0% |
| !! | TTAAGATAGTTGATTCTACT+CGG | + | chr3_2:5755782-5755801 | None:intergenic | 25.0% |
| !!! | TTAATTTCTCGCTTTGTTTT+GGG | - | chr3_2:5755798-5755817 | Msa0392540:intron | 25.0% |
| !!! | TTTTGCTTATTTTCCAAAGT+TGG | - | chr3_2:5756031-5756050 | Msa0392540:intron | 25.0% |
| !!! | AAATTCTGGATTTTTTTTCC+CGG | - | chr3_2:5756054-5756073 | Msa0392540:intron | 25.0% |
| ! | TGATTTATAAGAGAATGAAG+TGG | + | chr3_2:5756180-5756199 | None:intergenic | 25.0% |
| ! | TCATTCTCTTATAAATCATG+TGG | - | chr3_2:5756182-5756201 | Msa0392540:intron | 25.0% |
| ! | AAAATTTCGTTTGAAGAAAG+TGG | + | chr3_2:5756508-5756527 | None:intergenic | 25.0% |
| ! | TTGAGTTTAAGACTTGGAAT+TGG | + | chr3_2:5750858-5750877 | None:intergenic | 30.0% |
| ! | TTGCATTTGAGTTTAAGACT+TGG | + | chr3_2:5750864-5750883 | None:intergenic | 30.0% |
| ! | CATCTAATGATTTTATTGGC+AGG | - | chr3_2:5751199-5751218 | Msa0392540:intron | 30.0% |
| ! | TAGACAACGTAATTTTGCTT+TGG | - | chr3_2:5751235-5751254 | Msa0392540:intron | 30.0% |
| ! | ACATAATGCCTTAAGGTTTT+AGG | - | chr3_2:5751381-5751400 | Msa0392540:intron | 30.0% |
| AGATGGTAGAAAATAGTCTT+AGG | - | chr3_2:5751783-5751802 | Msa0392540:intron | 30.0% | |
| TTGTAGTAAAGAGAGTAGAT+CGG | - | chr3_2:5751840-5751859 | Msa0392540:intron | 30.0% | |
| TAATGAGTTCGATCCAAATA+TGG | - | chr3_2:5751931-5751950 | Msa0392540:intron | 30.0% | |
| ! | AAGCTTTATCCTACTAAGTT+GGG | + | chr3_2:5751999-5752018 | None:intergenic | 30.0% |
| !!! | TTTGGAAGGGTTTTTTAAGA+GGG | + | chr3_2:5752057-5752076 | None:intergenic | 30.0% |
| GAGAGGTTACAAAAAAATTG+GGG | + | chr3_2:5752084-5752103 | None:intergenic | 30.0% | |
| ! | TTTGGTCAGTCTATTTTGTA+TGG | - | chr3_2:5752148-5752167 | Msa0392540:CDS | 30.0% |
| ! | TTTTCTCCAACTATGCATTT+AGG | + | chr3_2:5752462-5752481 | None:intergenic | 30.0% |
| AAAGAACAAAATCGTGAATG+AGG | - | chr3_2:5752503-5752522 | Msa0392540:intron | 30.0% | |
| AAGAACAAAATCGTGAATGA+GGG | - | chr3_2:5752504-5752523 | Msa0392540:intron | 30.0% | |
| AGTAGTACATGTGTTGTAAA+CGG | - | chr3_2:5752703-5752722 | Msa0392540:intron | 30.0% | |
| TCAAAAAGCTGCAAACTAAT+AGG | + | chr3_2:5752938-5752957 | None:intergenic | 30.0% | |
| ! | AGTTTGCAGCTTTTTGAATT+TGG | - | chr3_2:5752941-5752960 | Msa0392540:CDS | 30.0% |
| TTCATACTATTTGTCAACAG+AGG | - | chr3_2:5753279-5753298 | Msa0392540:intron | 30.0% | |
| TAAATCATTTCTCAAGTCAC+AGG | + | chr3_2:5753699-5753718 | None:intergenic | 30.0% | |
| GTGACTTGAGAAATGATTTA+TGG | - | chr3_2:5753699-5753718 | Msa0392540:intron | 30.0% | |
| TCCCTTAATATTACTACTGT+TGG | - | chr3_2:5753741-5753760 | Msa0392540:intron | 30.0% | |
| CACCAACAGTAGTAATATTA+AGG | + | chr3_2:5753746-5753765 | None:intergenic | 30.0% | |
| !! | CTACTGTTGGTGTTATTAAT+AGG | - | chr3_2:5753754-5753773 | Msa0392540:intron | 30.0% |
| !!! | AACAAAAGCTGTTTTTTTGG+GGG | - | chr3_2:5753930-5753949 | Msa0392540:intron | 30.0% |
| CTTCCAAAAATACTTTGTGA+TGG | - | chr3_2:5754053-5754072 | Msa0392540:intron | 30.0% | |
| CTGAGAATAGTTAGTTAGAA+TGG | + | chr3_2:5754236-5754255 | None:intergenic | 30.0% | |
| CATTCTAACTAACTATTCTC+AGG | - | chr3_2:5754234-5754253 | Msa0392540:intron | 30.0% | |
| ! | CTATTGAAGTTGTTATTCCA+GGG | + | chr3_2:5754321-5754340 | None:intergenic | 30.0% |
| ! | CATAATGTTGTCCTTTTTGT+AGG | - | chr3_2:5754458-5754477 | Msa0392540:intron | 30.0% |
| !!! | CTATTTTGATCAATGAGGAA+AGG | + | chr3_2:5754487-5754506 | None:intergenic | 30.0% |
| TTCCTCATTGATCAAAATAG+TGG | - | chr3_2:5754487-5754506 | Msa0392540:CDS | 30.0% | |
| TTACTTACTGCTTTCATACA+TGG | + | chr3_2:5754518-5754537 | None:intergenic | 30.0% | |
| ATGAAAGCAGTAAGTAAGAA+AGG | - | chr3_2:5754521-5754540 | Msa0392540:CDS | 30.0% | |
| ATGAAAATGAAGGTGGTTTA+TGG | + | chr3_2:5754592-5754611 | None:intergenic | 30.0% | |
| AACAACTATGAAAATGAAGG+TGG | + | chr3_2:5754599-5754618 | None:intergenic | 30.0% | |
| ! | AGAAAGTACACAACATTCAA+TGG | + | chr3_2:5755027-5755046 | None:intergenic | 30.0% |
| TTGAATGTTGTGTACTTTCT+TGG | - | chr3_2:5755027-5755046 | Msa0392540:intron | 30.0% | |
| TAGAAGAACATTATCTTACC+GGG | + | chr3_2:5755348-5755367 | None:intergenic | 30.0% | |
| GTTCTTCTATCTCCAATTTA+TGG | - | chr3_2:5755359-5755378 | Msa0392540:intron | 30.0% | |
| TTTGCATTTCCTCCATAAAT+TGG | + | chr3_2:5755374-5755393 | None:intergenic | 30.0% | |
| !!! | CTTTGTCTGTTTGGTTTTTT+TGG | - | chr3_2:5755405-5755424 | Msa0392540:intron | 30.0% |
| TATGTGTCTCAAATCACTTT+CGG | - | chr3_2:5755561-5755580 | Msa0392540:intron | 30.0% | |
| !! | TGAATGTGTTATTTCGATCA+AGG | + | chr3_2:5755665-5755684 | None:intergenic | 30.0% |
| !! | GCATTTGATTTGTAACAATG+GGG | - | chr3_2:5755704-5755723 | Msa0392540:intron | 30.0% |
| ! | TAACAATGGGGTTAGTATTT+AGG | - | chr3_2:5755716-5755735 | Msa0392540:intron | 30.0% |
| ! | TAAGATAGTTGATTCTACTC+GGG | + | chr3_2:5755781-5755800 | None:intergenic | 30.0% |
| !!! | CTTAATTTCTCGCTTTGTTT+TGG | - | chr3_2:5755797-5755816 | Msa0392540:intron | 30.0% |
| !!! | TAATTTCTCGCTTTGTTTTG+GGG | - | chr3_2:5755799-5755818 | Msa0392540:intron | 30.0% |
| !! | CCTACATTTTGAAGAATGTA+AGG | + | chr3_2:5755914-5755933 | None:intergenic | 30.0% |
| CCTTACATTCTTCAAAATGT+AGG | - | chr3_2:5755911-5755930 | Msa0392540:intron | 30.0% | |
| ATTCTTCAAAATGTAGGAGA+AGG | - | chr3_2:5755917-5755936 | Msa0392540:intron | 30.0% | |
| ! | TTTTCCAAAGTTGGAAATTC+TGG | - | chr3_2:5756040-5756059 | Msa0392540:intron | 30.0% |
| AAATCCAGAATTTCCAACTT+TGG | + | chr3_2:5756047-5756066 | None:intergenic | 30.0% | |
| ! | AGCGTTTTTCTGATATTTCT+TGG | - | chr3_2:5756322-5756341 | Msa0392540:intron | 30.0% |
| TCCTTACATGAATATGAAAG+TGG | - | chr3_2:5756370-5756389 | Msa0392540:intron | 30.0% | |
| ACCACTTTCATATTCATGTA+AGG | + | chr3_2:5756374-5756393 | None:intergenic | 30.0% | |
| GAATAGGTTTCGAACAAATA+AGG | + | chr3_2:5756466-5756485 | None:intergenic | 30.0% | |
| CTATAAATTATCCGACGAAT+AGG | + | chr3_2:5756482-5756501 | None:intergenic | 30.0% | |
| ACAACTTTAAATAGCCTTTG+TGG | + | chr3_2:5756547-5756566 | None:intergenic | 30.0% | |
| TATGTGATGAACAAAATCAC+AGG | - | chr3_2:5756572-5756591 | Msa0392540:CDS | 30.0% | |
| TTTGGTGGAATTTGCATTTC+AGG | + | chr3_2:5751042-5751061 | None:intergenic | 35.0% | |
| ! | TAATGATTTTATTGGCAGGG+AGG | - | chr3_2:5751203-5751222 | Msa0392540:intron | 35.0% |
| GCAAAATTACGTTGTCTAGA+AGG | + | chr3_2:5751233-5751252 | None:intergenic | 35.0% | |
| ! | ACAACGTAATTTTGCTTTGG+AGG | - | chr3_2:5751238-5751257 | Msa0392540:intron | 35.0% |
| CTCGTATACATAATGCCTTA+AGG | - | chr3_2:5751374-5751393 | Msa0392540:intron | 35.0% | |
| !!! | AATGCCTTAAGGTTTTAGGT+CGG | - | chr3_2:5751385-5751404 | Msa0392540:intron | 35.0% |
| TGTTGTATGGAACAAAGTGT+TGG | - | chr3_2:5751621-5751640 | Msa0392540:intron | 35.0% | |
| CGCTTACTTTATTCTTGTGT+TGG | + | chr3_2:5751658-5751677 | None:intergenic | 35.0% | |
| CAAGAATAAAGTAAGCGTAG+CGG | - | chr3_2:5751661-5751680 | Msa0392540:intron | 35.0% | |
| ! | AGCAACTATAGTGGAAAAGA+TGG | - | chr3_2:5751766-5751785 | Msa0392540:intron | 35.0% |
| ! | TGGTAGAAAATAGTCTTAGG+TGG | - | chr3_2:5751786-5751805 | Msa0392540:intron | 35.0% |
| ! | GAAAATAGTCTTAGGTGGTT+TGG | - | chr3_2:5751791-5751810 | Msa0392540:intron | 35.0% |
| CTCTTTACTACAAAATCTGC+AGG | + | chr3_2:5751833-5751852 | None:intergenic | 35.0% | |
| ! | TTTATCCTACTAAGTTGGGT+TGG | + | chr3_2:5751995-5752014 | None:intergenic | 35.0% |
| ! | CAAGCTTTATCCTACTAAGT+TGG | + | chr3_2:5752000-5752019 | None:intergenic | 35.0% |
| CAACTTAGTAGGATAAAGCT+TGG | - | chr3_2:5751998-5752017 | Msa0392540:intron | 35.0% | |
| !!! | GTTTGGAAGGGTTTTTTAAG+AGG | + | chr3_2:5752058-5752077 | None:intergenic | 35.0% |
| GGTTACAAAAAAATTGGGGT+CGG | + | chr3_2:5752080-5752099 | None:intergenic | 35.0% | |
| !!! | TTGTATGGATTTTGGTTCCT+CGG | - | chr3_2:5752163-5752182 | Msa0392540:CDS | 35.0% |
| !! | TTGATGATGTGACATTGTCT+AGG | - | chr3_2:5752282-5752301 | Msa0392540:intron | 35.0% |
| AAGAGGTTTAGTCAGTTACA+CGG | + | chr3_2:5752803-5752822 | None:intergenic | 35.0% | |
| GCTATCATCAAAACTCAAAG+AGG | + | chr3_2:5752820-5752839 | None:intergenic | 35.0% | |
| ! | ATTGAAAGTGCATCGAGTAA+AGG | - | chr3_2:5752896-5752915 | Msa0392540:intron | 35.0% |
| ! | TTGAAAGTGCATCGAGTAAA+GGG | - | chr3_2:5752897-5752916 | Msa0392540:intron | 35.0% |
| AAAAGCTGCAAACTAATAGG+AGG | + | chr3_2:5752935-5752954 | None:intergenic | 35.0% | |
| TATTAGCAATAGCATCACCA+AGG | + | chr3_2:5752989-5753008 | None:intergenic | 35.0% | |
| GTGATGCTATTGCTAATAAC+AGG | - | chr3_2:5752991-5753010 | Msa0392540:intron | 35.0% | |
| !! | TTCTTTTTAGTGCAAGCATC+AGG | - | chr3_2:5753082-5753101 | Msa0392540:intron | 35.0% |
| ! | AGAAAGATCTAGTTCAGTCA+TGG | + | chr3_2:5753335-5753354 | None:intergenic | 35.0% |
| TTGTGTATACGATGAATCTG+CGG | + | chr3_2:5753369-5753388 | None:intergenic | 35.0% | |
| ATGAAACACTGACAAAGACA+TGG | - | chr3_2:5753498-5753517 | Msa0392540:intron | 35.0% | |
| TAGGTTTATCCTTGTCCTAA+AGG | - | chr3_2:5753773-5753792 | Msa0392540:intron | 35.0% | |
| !!! | TTTTTTTGGGGGTATCTGTT+AGG | - | chr3_2:5753941-5753960 | Msa0392540:intron | 35.0% |
| ! | TGGAATGGAGTGGATTTAAA+TGG | - | chr3_2:5754073-5754092 | Msa0392540:intron | 35.0% |
| !! | TTTTGGGTGGTTAGTGTTAA+AGG | + | chr3_2:5754209-5754228 | None:intergenic | 35.0% |
| !!! | TTAGAATGGCTATTTTTGGG+TGG | + | chr3_2:5754222-5754241 | None:intergenic | 35.0% |
| !! | TTTTATATGCTGATTGACCC+TGG | - | chr3_2:5754301-5754320 | Msa0392540:intron | 35.0% |
| ! | CCTATTGAAGTTGTTATTCC+AGG | + | chr3_2:5754322-5754341 | None:intergenic | 35.0% |
| CCTGGAATAACAACTTCAAT+AGG | - | chr3_2:5754319-5754338 | Msa0392540:intron | 35.0% | |
| AGGAAAGGAAACCTACAAAA+AGG | + | chr3_2:5754472-5754491 | None:intergenic | 35.0% | |
| !!! | CACCACTATTTTGATCAATG+AGG | + | chr3_2:5754492-5754511 | None:intergenic | 35.0% |
| !! | AGTTTGGATTAGTCCTTCTT+AGG | - | chr3_2:5754623-5754642 | Msa0392540:intron | 35.0% |
| !! | GTTTGGATTAGTCCTTCTTA+GGG | - | chr3_2:5754624-5754643 | Msa0392540:intron | 35.0% |
| AAAACAAACATGCCCTAAGA+AGG | + | chr3_2:5754639-5754658 | None:intergenic | 35.0% | |
| ! | TTCTTAGGGCATGTTTGTTT+TGG | - | chr3_2:5754638-5754657 | Msa0392540:intron | 35.0% |
| ! | CTTTCTTGGTTTCTTGTTGT+AGG | - | chr3_2:5755041-5755060 | Msa0392540:intron | 35.0% |
| AAATACTTGTTCGAGCGATA+TGG | - | chr3_2:5755074-5755093 | Msa0392540:intron | 35.0% | |
| !! | GAGGTATACATATTTTAGGG+AGG | - | chr3_2:5755130-5755149 | Msa0392540:intron | 35.0% |
| GTTCTCCTATGAAAATAACC+CGG | - | chr3_2:5755327-5755346 | Msa0392540:intron | 35.0% | |
| !! | TCTTACCGGGTTATTTTCAT+AGG | + | chr3_2:5755335-5755354 | None:intergenic | 35.0% |
| CTTCTATCTCCAATTTATGG+AGG | - | chr3_2:5755362-5755381 | Msa0392540:intron | 35.0% | |
| TTTGTCTATGTTCTCAACCT+TGG | - | chr3_2:5755613-5755632 | Msa0392540:intron | 35.0% | |
| TTGTCTATGTTCTCAACCTT+GGG | - | chr3_2:5755614-5755633 | Msa0392540:intron | 35.0% | |
| AAGGAATGATAAAGAACCCA+AGG | + | chr3_2:5755633-5755652 | None:intergenic | 35.0% | |
| TCGATCAAGGTTCAATTGAA+AGG | + | chr3_2:5755652-5755671 | None:intergenic | 35.0% | |
| TACAAATGTAGTGATATGCC+GGG | + | chr3_2:5756075-5756094 | None:intergenic | 35.0% | |
| GTACAAATGTAGTGATATGC+CGG | + | chr3_2:5756076-5756095 | None:intergenic | 35.0% | |
| ! | GAATGAAGTGGATTTCAACA+AGG | + | chr3_2:5756168-5756187 | None:intergenic | 35.0% |
| AGAAAAACGCTAGCAAGATA+CGG | + | chr3_2:5756313-5756332 | None:intergenic | 35.0% | |
| GTGTTGTGATCAACAAAGTA+AGG | + | chr3_2:5756409-5756428 | None:intergenic | 35.0% | |
| TACTTTGTTGATCACAACAC+TGG | - | chr3_2:5756409-5756428 | Msa0392540:intron | 35.0% | |
| TTTGTTCGAAACCTATTCGT+CGG | - | chr3_2:5756468-5756487 | Msa0392540:CDS | 35.0% | |
| GTTCTTTCAAATCACCACAA+AGG | - | chr3_2:5756530-5756549 | Msa0392540:CDS | 35.0% | |
| AGACTTGGAATTGGTATGCT+GGG | + | chr3_2:5750849-5750868 | None:intergenic | 40.0% | |
| AAGACTTGGAATTGGTATGC+TGG | + | chr3_2:5750850-5750869 | None:intergenic | 40.0% | |
| !! | GAACTTGAAGTGGATTGTTG+TGG | + | chr3_2:5750939-5750958 | None:intergenic | 40.0% |
| ACAGAGAAAAGCTTGAGCAA+GGG | + | chr3_2:5750993-5751012 | None:intergenic | 40.0% | |
| TACAGAGAAAAGCTTGAGCA+AGG | + | chr3_2:5750994-5751013 | None:intergenic | 40.0% | |
| TTGTAAGGCTCTCTTTGCTT+TGG | - | chr3_2:5751297-5751316 | Msa0392540:intron | 40.0% | |
| CATTCCGACCTAAAACCTTA+AGG | + | chr3_2:5751392-5751411 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTAGGTCGGAATG+TGG | - | chr3_2:5751392-5751411 | Msa0392540:intron | 40.0% |
| TTTGTTCCATACAACATCGC+CGG | + | chr3_2:5751617-5751636 | None:intergenic | 40.0% | |
| !! | GTATGGAACAAAGTGTTGGA+CGG | - | chr3_2:5751625-5751644 | Msa0392540:intron | 40.0% |
| CGGAGATTAGGATGTTATGT+TGG | - | chr3_2:5751681-5751700 | Msa0392540:intron | 40.0% | |
| AGGATGTTATGTTGGATGTG+TGG | - | chr3_2:5751689-5751708 | Msa0392540:intron | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | - | chr3_2:5751708-5751727 | Msa0392540:intron | 40.0% | |
| GATGACATTAGAGAGAGAGT+TGG | - | chr3_2:5751740-5751759 | Msa0392540:intron | 40.0% | |
| AGTTGGAGTAGCAACTATAG+TGG | - | chr3_2:5751757-5751776 | Msa0392540:intron | 40.0% | |
| AGTAAAGAGAGTAGATCGGA+TGG | - | chr3_2:5751844-5751863 | Msa0392540:intron | 40.0% | |
| GAGGATAGTCAGATTACAAG+AGG | - | chr3_2:5751866-5751885 | Msa0392540:intron | 40.0% | |
| AGTCAGATTACAAGAGGTAG+AGG | - | chr3_2:5751872-5751891 | Msa0392540:intron | 40.0% | |
| CAAAAAAATTGGGGTCGGTT+TGG | + | chr3_2:5752075-5752094 | None:intergenic | 40.0% | |
| GTAAAAGGGCAAAACAAGAG+AGG | + | chr3_2:5752101-5752120 | None:intergenic | 40.0% | |
| !!! | TGTATGGATTTTGGTTCCTC+GGG | - | chr3_2:5752164-5752183 | Msa0392540:CDS | 40.0% |
| AAGACACTCTCTAGTTGCTT+AGG | - | chr3_2:5752385-5752404 | Msa0392540:intron | 40.0% | |
| !!! | AGGACTGGTTTTCTATGATG+TGG | + | chr3_2:5752442-5752461 | None:intergenic | 40.0% |
| ACCAGTCCTAAATGCATAGT+TGG | - | chr3_2:5752453-5752472 | Msa0392540:intron | 40.0% | |
| ! | TCCAACTATGCATTTAGGAC+TGG | + | chr3_2:5752457-5752476 | None:intergenic | 40.0% |
| ATAGCACTACAAAAGGGCTA+TGG | + | chr3_2:5752610-5752629 | None:intergenic | 40.0% | |
| ATAGCTAGCAACATCTTCCT+TGG | - | chr3_2:5752835-5752854 | Msa0392540:intron | 40.0% | |
| ! | TTTTGCTACCGAAGAATCCT+TGG | - | chr3_2:5752969-5752988 | Msa0392540:intron | 40.0% |
| TAGCATCACCAAGGATTCTT+CGG | + | chr3_2:5752980-5752999 | None:intergenic | 40.0% | |
| TGAACTAGATCTTTCTGTCG+AGG | - | chr3_2:5753339-5753358 | Msa0392540:intron | 40.0% | |
| !! | ATTGAAGGCGTTTCAAGTGT+CGG | + | chr3_2:5753619-5753638 | None:intergenic | 40.0% |
| !! | CTTACAGAACCTTTAGGACA+AGG | + | chr3_2:5753785-5753804 | None:intergenic | 40.0% |
| CTGTGTCTTACAGAACCTTT+AGG | + | chr3_2:5753791-5753810 | None:intergenic | 40.0% | |
| ! | TACTTTGTGATGGAATGGAG+TGG | - | chr3_2:5754063-5754082 | Msa0392540:intron | 40.0% |
| ACGGAGTTATCACTCTATGA+TGG | - | chr3_2:5754102-5754121 | Msa0392540:CDS | 40.0% | |
| ! | GGATTTTATGACAACTTCCC+TGG | - | chr3_2:5754147-5754166 | Msa0392540:intron | 40.0% |
| CAACATTCACAAATTGGCCA+GGG | + | chr3_2:5754167-5754186 | None:intergenic | 40.0% | |
| TGCAGCCAACATTCACAAAT+TGG | + | chr3_2:5754173-5754192 | None:intergenic | 40.0% | |
| TGAAACAAACGCACCCTTAA+TGG | - | chr3_2:5754972-5754991 | Msa0392540:intron | 40.0% | |
| ! | CTCTCTAAAAGTCCCAATGA+TGG | + | chr3_2:5755113-5755132 | None:intergenic | 40.0% |
| !! | CATCATTGGGACTTTTAGAG+AGG | - | chr3_2:5755111-5755130 | Msa0392540:intron | 40.0% |
| CGCAAGAGTGAGTTATTATG+AGG | + | chr3_2:5755202-5755221 | None:intergenic | 40.0% | |
| AGGTAGAGGAATGACATTGT+GGG | - | chr3_2:5755264-5755283 | Msa0392540:intron | 40.0% | |
| GAGGAAATGCAAACATGTAG+AGG | - | chr3_2:5755381-5755400 | Msa0392540:intron | 40.0% | |
| TGTAGAGGACTTTGTCTGTT+TGG | - | chr3_2:5755396-5755415 | Msa0392540:intron | 40.0% | |
| ! | AAAGTGTGCGTTTGGTTTCA+CGG | + | chr3_2:5755596-5755615 | None:intergenic | 40.0% |
| ACATAGACAAAGTGTGCGTT+TGG | + | chr3_2:5755604-5755623 | None:intergenic | 40.0% | |
| AAGTTACTCTTGGATGCTTC+TGG | - | chr3_2:5755953-5755972 | Msa0392540:intron | 40.0% | |
| CACTACATTTGTACCGTACT+AGG | - | chr3_2:5756082-5756101 | Msa0392540:intron | 40.0% | |
| AGCCAAATCATCCTTGAGAA+GGG | + | chr3_2:5756110-5756129 | None:intergenic | 40.0% | |
| AAGCCAAATCATCCTTGAGA+AGG | + | chr3_2:5756111-5756130 | None:intergenic | 40.0% | |
| ATATGAAAGTGGTTCTCTGC+AGG | - | chr3_2:5756381-5756400 | Msa0392540:intron | 40.0% | |
| CACAACACTGGATTTCAATC+TGG | - | chr3_2:5756421-5756440 | Msa0392540:intron | 40.0% | |
| TCAGTTCCCAACACTCTCTA+CGG | - | chr3_2:5750813-5750832 | Msa0392540:three_prime_UTR | 45.0% | |
| !! | GTTATGCCGTAGAGAGTGTT+GGG | + | chr3_2:5750822-5750841 | None:intergenic | 45.0% |
| ! | AGTTATGCCGTAGAGAGTGT+TGG | + | chr3_2:5750823-5750842 | None:intergenic | 45.0% |
| GGAAGGAGTTGAACTTGAAG+TGG | + | chr3_2:5750949-5750968 | None:intergenic | 45.0% | |
| AGAAAGGAGAGAAAGGAGGA+AGG | + | chr3_2:5750966-5750985 | None:intergenic | 45.0% | |
| ACAGAGAAAGGAGAGAAAGG+AGG | + | chr3_2:5750970-5750989 | None:intergenic | 45.0% | |
| TAAAAACAGGCCAATGCTCC+TGG | + | chr3_2:5751427-5751446 | None:intergenic | 45.0% | |
| AAACCTGCTCCCAAACTGTT+GGG | + | chr3_2:5751471-5751490 | None:intergenic | 45.0% | |
| TAAACCTGCTCCCAAACTGT+TGG | + | chr3_2:5751472-5751491 | None:intergenic | 45.0% | |
| AGTTTGGGAGCAGGTTTAAG+AGG | - | chr3_2:5751474-5751493 | Msa0392540:CDS | 45.0% | |
| GTTTGGGAGCAGGTTTAAGA+GGG | - | chr3_2:5751475-5751494 | Msa0392540:CDS | 45.0% | |
| TTTGGGAGCAGGTTTAAGAG+GGG | - | chr3_2:5751476-5751495 | Msa0392540:CDS | 45.0% | |
| TAAAACCCGGCGATGTTGTA+TGG | - | chr3_2:5751608-5751627 | Msa0392540:intron | 45.0% | |
| TTGTTCCATACAACATCGCC+GGG | + | chr3_2:5751616-5751635 | None:intergenic | 45.0% | |
| ! | AAGTAAGCGTAGCGGAGATT+AGG | - | chr3_2:5751669-5751688 | Msa0392540:intron | 45.0% |
| !! | TCTTAGGTGGTTTGGTCATG+TGG | - | chr3_2:5751799-5751818 | Msa0392540:intron | 45.0% |
| AAAGAGAGTAGATCGGATGG+AGG | - | chr3_2:5751847-5751866 | Msa0392540:intron | 45.0% | |
| TGTAGCCAACCCAACTTAGT+AGG | - | chr3_2:5751987-5752006 | Msa0392540:intron | 45.0% | |
| !! | AAATTGGGGTCGGTTTGGAA+GGG | + | chr3_2:5752070-5752089 | None:intergenic | 45.0% |
| !! | AAAATTGGGGTCGGTTTGGA+AGG | + | chr3_2:5752071-5752090 | None:intergenic | 45.0% |
| ACACTCTCTAGTTGCTTAGG+TGG | - | chr3_2:5752388-5752407 | Msa0392540:intron | 45.0% | |
| CAGCACATCAAGGTTTGCAT+GGG | - | chr3_2:5752859-5752878 | Msa0392540:intron | 45.0% | |
| AGCACATCAAGGTTTGCATG+GGG | - | chr3_2:5752860-5752879 | Msa0392540:intron | 45.0% | |
| TTTAGTGCAAGCATCAGGCT+TGG | - | chr3_2:5753087-5753106 | Msa0392540:intron | 45.0% | |
| ! | AGGCATGCCCTTTTTGTAGA+AGG | - | chr3_2:5753299-5753318 | Msa0392540:intron | 45.0% |
| ! | GGCATGCCCTTTTTGTAGAA+GGG | - | chr3_2:5753300-5753319 | Msa0392540:intron | 45.0% |
| ! | GCCCTTTTTGTAGAAGGGTA+CGG | - | chr3_2:5753305-5753324 | Msa0392540:intron | 45.0% |
| CCCGTACCCTTCTACAAAAA+GGG | + | chr3_2:5753309-5753328 | None:intergenic | 45.0% | |
| !! | CCCTTTTTGTAGAAGGGTAC+GGG | - | chr3_2:5753306-5753325 | Msa0392540:intron | 45.0% |
| TCCCGTACCCTTCTACAAAA+AGG | + | chr3_2:5753310-5753329 | None:intergenic | 45.0% | |
| !! | TTTTTGTAGAAGGGTACGGG+AGG | - | chr3_2:5753309-5753328 | Msa0392540:intron | 45.0% |
| ! | ACGCCTTCAATCTGAAGTGT+TGG | - | chr3_2:5753628-5753647 | Msa0392540:CDS | 45.0% |
| GCACCAACACTTCAGATTGA+AGG | + | chr3_2:5753634-5753653 | None:intergenic | 45.0% | |
| AGGTTCTGTAAGACACAGAG+AGG | - | chr3_2:5753793-5753812 | Msa0392540:intron | 45.0% | |
| TTCTGTAAGACACAGAGAGG+TGG | - | chr3_2:5753796-5753815 | Msa0392540:intron | 45.0% | |
| ! | ATCACTCTATGATGGTGCCA+TGG | - | chr3_2:5754110-5754129 | Msa0392540:CDS | 45.0% |
| CCAACATTCACAAATTGGCC+AGG | + | chr3_2:5754168-5754187 | None:intergenic | 45.0% | |
| CCTGGCCAATTTGTGAATGT+TGG | - | chr3_2:5754165-5754184 | Msa0392540:intron | 45.0% | |
| TTGTTCGAGCGATATGGAGA+AGG | - | chr3_2:5755080-5755099 | Msa0392540:intron | 45.0% | |
| TGTTCGAGCGATATGGAGAA+GGG | - | chr3_2:5755081-5755100 | Msa0392540:intron | 45.0% | |
| AGAAGGGAGAAGTCCATCAT+TGG | - | chr3_2:5755097-5755116 | Msa0392540:intron | 45.0% | |
| GAAGGGAGAAGTCCATCATT+GGG | - | chr3_2:5755098-5755117 | Msa0392540:intron | 45.0% | |
| ATGCCAACAATTCTACGAGC+AGG | - | chr3_2:5755244-5755263 | Msa0392540:intron | 45.0% | |
| CTACCTGCTCGTAGAATTGT+TGG | + | chr3_2:5755250-5755269 | None:intergenic | 45.0% | |
| ACAATTCTACGAGCAGGTAG+AGG | - | chr3_2:5755250-5755269 | Msa0392540:intron | 45.0% | |
| CAGGTAGAGGAATGACATTG+TGG | - | chr3_2:5755263-5755282 | Msa0392540:intron | 45.0% | |
| TGACATTGTGGGAACGTTCT+AGG | - | chr3_2:5755275-5755294 | Msa0392540:intron | 45.0% | |
| GACATTGTGGGAACGTTCTA+GGG | - | chr3_2:5755276-5755295 | Msa0392540:intron | 45.0% | |
| ! | TAGTTGATTCTACTCGGGCA+CGG | + | chr3_2:5755776-5755795 | None:intergenic | 45.0% |
| ACGACGAACGAAGTTACTCT+TGG | - | chr3_2:5755943-5755962 | Msa0392540:intron | 45.0% | |
| CACCCTTCTCAAGGATGATT+TGG | - | chr3_2:5756105-5756124 | Msa0392540:intron | 45.0% | |
| GTTGGGAACTGAGCATGAGT+TGG | + | chr3_2:5750805-5750824 | None:intergenic | 50.0% | |
| GGGACAGAGAAAGGAGAGAA+AGG | + | chr3_2:5750973-5750992 | None:intergenic | 50.0% | |
| CTTGAGCAAGGGACAGAGAA+AGG | + | chr3_2:5750982-5751001 | None:intergenic | 50.0% | |
| AGGCGAGCAGGAGTAAAAAC+AGG | + | chr3_2:5751440-5751459 | None:intergenic | 50.0% | |
| ! | TTTTTACTCCTGCTCGCCTG+CGG | - | chr3_2:5751441-5751460 | Msa0392540:intron | 50.0% |
| TGCGGATTCCCCAACAGTTT+GGG | - | chr3_2:5751459-5751478 | Msa0392540:intron | 50.0% | |
| AACCTGCTCCCAAACTGTTG+GGG | + | chr3_2:5751470-5751489 | None:intergenic | 50.0% | |
| TTGGGAGCAGGTTTAAGAGG+GGG | - | chr3_2:5751477-5751496 | Msa0392540:CDS | 50.0% | |
| ! | AAACCTTGATGTGCTGGCCA+AGG | + | chr3_2:5752855-5752874 | None:intergenic | 50.0% |
| CCATGCAAACCTTGATGTGC+TGG | + | chr3_2:5752861-5752880 | None:intergenic | 50.0% | |
| CCAGCACATCAAGGTTTGCA+TGG | - | chr3_2:5752858-5752877 | Msa0392540:intron | 50.0% | |
| CACATGTGTCAGTGTCGTGT+CGG | - | chr3_2:5753590-5753609 | Msa0392540:intron | 50.0% | |
| AGAGAGGTGGTCAGAGAAAC+TGG | - | chr3_2:5753809-5753828 | Msa0392540:intron | 50.0% | |
| ! | GGTGCCATGGTAGATTACAG+TGG | - | chr3_2:5754123-5754142 | Msa0392540:CDS | 50.0% |
| GCCATGGTAGATTACAGTGG+CGG | - | chr3_2:5754126-5754145 | Msa0392540:CDS | 50.0% | |
| TCCGCCACTGTAATCTACCA+TGG | + | chr3_2:5754130-5754149 | None:intergenic | 50.0% | |
| TTGCGCAGCACTATCTTCAC+TGG | - | chr3_2:5755217-5755236 | Msa0392540:intron | 50.0% | |
| GCAGCACTATCTTCACTGGA+TGG | - | chr3_2:5755221-5755240 | Msa0392540:intron | 50.0% | |
| TGAACCTCCTCCTAGAAAGC+TGG | - | chr3_2:5755300-5755319 | Msa0392540:intron | 50.0% | |
| AACAGCTCCAGCTTTCTAGG+AGG | + | chr3_2:5755310-5755329 | None:intergenic | 50.0% | |
| GAGAACAGCTCCAGCTTTCT+AGG | + | chr3_2:5755313-5755332 | None:intergenic | 50.0% | |
| ! | GTGCGTTTGGTTTCACGGTA+GGG | + | chr3_2:5755591-5755610 | None:intergenic | 50.0% |
| ! | TGTGCGTTTGGTTTCACGGT+AGG | + | chr3_2:5755592-5755611 | None:intergenic | 50.0% |
| GAATGCTCGTATTGTGCGTG+AGG | - | chr3_2:5755868-5755887 | Msa0392540:intron | 50.0% | |
| ! | GCGTGAGGCATTATGCGAAT+TGG | - | chr3_2:5755883-5755902 | Msa0392540:intron | 50.0% |
| !! | CTTGAGAAGGGTGCCTAGTA+CGG | + | chr3_2:5756098-5756117 | None:intergenic | 50.0% |
| !! | GCATGAGTTGGTGCAGTGGA+AGG | + | chr3_2:5750793-5750812 | None:intergenic | 55.0% |
| !! | CTGAGCATGAGTTGGTGCAG+TGG | + | chr3_2:5750797-5750816 | None:intergenic | 55.0% |
| AACAGGCCAATGCTCCTGGA+TGG | + | chr3_2:5751423-5751442 | None:intergenic | 55.0% | |
| CAAACTGTTGGGGAATCCGC+AGG | + | chr3_2:5751460-5751479 | None:intergenic | 55.0% | |
| CTGCGGATTCCCCAACAGTT+TGG | - | chr3_2:5751458-5751477 | Msa0392540:intron | 55.0% | |
| TTCCCCAACAGTTTGGGAGC+AGG | - | chr3_2:5751465-5751484 | Msa0392540:CDS | 55.0% | |
| GAGCAGGTTTAAGAGGGGGA+GGG | - | chr3_2:5751481-5751500 | Msa0392540:CDS | 55.0% | |
| AGCAGGTTTAAGAGGGGGAG+GGG | - | chr3_2:5751482-5751501 | Msa0392540:CDS | 55.0% | |
| ! | GTCAGACAGTTTGAGACCCG+AGG | + | chr3_2:5752183-5752202 | None:intergenic | 55.0% |
| CTTCCTTGGCCAGCACATCA+AGG | - | chr3_2:5752849-5752868 | Msa0392540:intron | 55.0% | |
| CGACACGACACTGACACATG+TGG | + | chr3_2:5753592-5753611 | None:intergenic | 55.0% | |
| GAGGTGGTCAGAGAAACTGG+TGG | - | chr3_2:5753812-5753831 | Msa0392540:intron | 55.0% | |
| ! | AGCTCCAGCTTTCTAGGAGG+AGG | + | chr3_2:5755307-5755326 | None:intergenic | 55.0% |
| CGTACTAGGCACCCTTCTCA+AGG | - | chr3_2:5756096-5756115 | Msa0392540:intron | 55.0% | |
| GGAATGTGGCGTCTCCATCC+AGG | - | chr3_2:5751406-5751425 | Msa0392540:intron | 60.0% | |
| ! | GCGTCTCCATCCAGGAGCAT+TGG | - | chr3_2:5751414-5751433 | Msa0392540:intron | 60.0% |
| GGAGCAGGTTTAAGAGGGGG+AGG | - | chr3_2:5751480-5751499 | Msa0392540:CDS | 60.0% | |
| AGGTTTAAGAGGGGGAGGGG+AGG | - | chr3_2:5751485-5751504 | Msa0392540:CDS | 60.0% | |
| GGTTTAAGAGGGGGAGGGGA+GGG | - | chr3_2:5751486-5751505 | Msa0392540:CDS | 60.0% | |
| TGGGGAATCCGCAGGCGAGC+AGG | + | chr3_2:5751452-5751471 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 5750773 | 5756676 | 5750773 | ID=Msa0392540;Name=Msa0392540 |
| chr3_2 | mRNA | 5750773 | 5756676 | 5750773 | ID=Msa0392540-mRNA-1;Parent=Msa0392540;Name=Msa0392540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=13|1|1|1|0.88|0.9|10|175|325 |
| chr3_2 | exon | 5750773 | 5751046 | 5750773 | ID=Msa0392540-mRNA-1:exon:1451;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5751464 | 5751580 | 5751464 | ID=Msa0392540-mRNA-1:exon:1450;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5752101 | 5752224 | 5752101 | ID=Msa0392540-mRNA-1:exon:1449;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5752317 | 5752386 | 5752317 | ID=Msa0392540-mRNA-1:exon:1448;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5752920 | 5752969 | 5752920 | ID=Msa0392540-mRNA-1:exon:1447;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5753606 | 5753673 | 5753606 | ID=Msa0392540-mRNA-1:exon:1446;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5754089 | 5754150 | 5754089 | ID=Msa0392540-mRNA-1:exon:1445;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5754487 | 5754610 | 5754487 | ID=Msa0392540-mRNA-1:exon:1444;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5756190 | 5756228 | 5756190 | ID=Msa0392540-mRNA-1:exon:1443;Parent=Msa0392540-mRNA-1 |
| chr3_2 | exon | 5756439 | 5756676 | 5756439 | ID=Msa0392540-mRNA-1:exon:1442;Parent=Msa0392540-mRNA-1 |
| chr3_2 | five_prime_UTR | 5756664 | 5756676 | 5756664 | ID=Msa0392540-mRNA-1:five_prime_utr;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5756439 | 5756663 | 5756439 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5756190 | 5756228 | 5756190 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5754487 | 5754610 | 5754487 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5754089 | 5754150 | 5754089 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5753606 | 5753673 | 5753606 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5752920 | 5752969 | 5752920 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5752317 | 5752386 | 5752317 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5752101 | 5752224 | 5752101 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5751464 | 5751580 | 5751464 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | CDS | 5750948 | 5751046 | 5750948 | ID=Msa0392540-mRNA-1:cds;Parent=Msa0392540-mRNA-1 |
| chr3_2 | three_prime_UTR | 5750773 | 5750947 | 5750773 | ID=Msa0392540-mRNA-1:three_prime_utr;Parent=Msa0392540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
