AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034940 MtrunA17_Chr1g0197251 94.135 989 25 3 1 988 15 971 0.0 1915
Msa0034940 MtrunA17_Chr3g0132391 30.168 358 193 14 282 623 200 516 6.10e-23 105
Msa0034940 MtrunA17_Chr8g0389131 27.211 294 152 12 282 554 172 424 3.04e-17 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034940 AT5G04360.1 68.831 924 256 3 63 986 72 963 0.0 1327
Msa0034940 AT5G04360.2 68.831 924 256 3 63 986 72 963 0.0 1327
Msa0034940 AT4G09020.1 30.195 308 167 12 325 623 235 503 6.46e-23 105
Msa0034940 AT2G39930.1 27.350 351 188 15 325 649 217 526 2.71e-15 81.3
Msa0034940 AT2G39930.3 27.350 351 188 15 325 649 217 526 3.08e-15 80.9
Msa0034940 AT2G39930.2 27.350 351 188 15 325 649 217 526 6.40e-15 79.7

Find 265 sgRNAs with CRISPR-Local

Find 797 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGACATTGTGAGCTTAA+AGG 0.181249 1_1:+62917861 Msa0034940:CDS
GATGGTCATGATGGCTTTCC+TGG 0.187776 1_1:+62919509 Msa0034940:CDS
TCTTAAACCTGTTGCGTATA+AGG 0.214452 1_1:+62919103 Msa0034940:CDS
AATCTTGCTGGAACACAAAT+TGG 0.219718 1_1:+62914130 Msa0034940:CDS
TTACATACAATTCCAATAAC+TGG 0.246376 1_1:+62918610 Msa0034940:CDS
ACTGGACCATCGCTGGTTTC+TGG 0.249604 1_1:+62919464 Msa0034940:CDS
ATCAGAGAAAGAATGTAAAA+TGG 0.249934 1_1:-62910921 None:intergenic
AAAGGTACAACCCTGTTCTT+TGG 0.254002 1_1:+62912275 Msa0034940:intron
CTCAAGAGGAACAATTTCTA+TGG 0.266292 1_1:-62910542 None:intergenic
TATTGTACTCAAGAGCTTAT+TGG 0.266539 1_1:+62908570 Msa0034940:CDS
AGTTATATCCATCAAAGTTT+TGG 0.272406 1_1:-62912168 None:intergenic
GAATGTGAATGCTTTGTTTC+GGG 0.273854 1_1:+62919937 Msa0034940:three_prime_UTR
GAATACACTTACAGTCTCTA+TGG 0.277135 1_1:-62917642 None:intergenic
TGTAATTATTACATTATTAT+CGG 0.278795 1_1:-62919973 None:intergenic
GCATATATGAATTGCATATA+AGG 0.279594 1_1:+62910948 Msa0034940:CDS
AAGACCAACACCCCAGTTAT+TGG 0.280956 1_1:-62918622 None:intergenic
TTACTTGCATAGCTGCCTTT+AGG 0.287306 1_1:-62912304 None:intergenic
AATTGCATATAAGGGATTTC+AGG 0.294083 1_1:+62910957 Msa0034940:CDS
ATTGTACTCAAGAGCTTATT+GGG 0.294199 1_1:+62908571 Msa0034940:CDS
AGTGATTATGATGCTAGTTT+TGG 0.295966 1_1:+62919996 Msa0034940:three_prime_UTR
TTGCCAACATTTCAATTTGC+TGG 0.298068 1_1:+62911637 Msa0034940:CDS
TCAAAATATGAGGCTTCTTC+TGG 0.304044 1_1:+62919853 Msa0034940:CDS
AATGTTGATCATCATCAAAA+TGG 0.306446 1_1:+62908617 Msa0034940:CDS
ATTTGGCCACCCTCTTCAAC+AGG 0.307402 1_1:+62914491 Msa0034940:CDS
AAAAGGTGTATTACATTTGC+AGG 0.313809 1_1:-62909316 None:intergenic
TACAATCATTTGCAGGGAAA+TGG 0.314634 1_1:+62912566 Msa0034940:CDS
TACTTGCATAGCTGCCTTTA+GGG 0.319608 1_1:-62912303 None:intergenic
ATTGAAGATTTCTTGATTGC+AGG 0.319654 1_1:-62919695 None:intergenic
CTTTCCTGGGTTGTCTCAGC+TGG 0.320329 1_1:+62919523 Msa0034940:CDS
CAATGGCAGTAGTAGATAAA+TGG 0.329557 1_1:+62916806 Msa0034940:CDS
GAAGGGAAAGAAAGTGAAAA+TGG 0.334303 1_1:-62908223 None:intergenic
AAGGTACAACCCTGTTCTTT+GGG 0.334500 1_1:+62912276 Msa0034940:intron
AAAACTTTGATGGATATAAC+TGG 0.339150 1_1:+62912170 Msa0034940:CDS
CATAAATAACAATCGCCAAC+TGG 0.340668 1_1:-62909950 None:intergenic
AGATAACCACCGCGAAATTC+AGG 0.345010 1_1:-62911375 None:intergenic
CGAAACTCAATTGTACGGTT+TGG 0.349317 1_1:-62912337 None:intergenic
GCTTCTCAGTTCAATCTTGC+TGG 0.349733 1_1:+62914118 Msa0034940:CDS
TACTGTCTACAATCATTTGC+AGG 0.352877 1_1:+62912559 Msa0034940:CDS
TTGAGGAGGAACACGGTGTT+TGG 0.355434 1_1:+62910560 Msa0034940:CDS
GGGTTCAGATTTGACCTTAT+GGG 0.356426 1_1:+62913325 Msa0034940:CDS
ATTGAAATGTTGGCAATAGA+TGG 0.361387 1_1:-62911630 None:intergenic
TGGGTTCAGATTTGACCTTA+TGG 0.365737 1_1:+62913324 Msa0034940:CDS
ATCCTATTTCTGCAGCCTAA+TGG 0.365977 1_1:+62914887 Msa0034940:intron
TCTTCAATTGCATCCCGTTC+AGG 0.367312 1_1:+62919710 Msa0034940:CDS
ATTCAAAGAAGCATCTTTGC+TGG 0.372570 1_1:-62908657 None:intergenic
TGAGTTTCGTAAGATGGTTC+AGG 0.374682 1_1:+62912351 Msa0034940:CDS
ATTGTACGGTTTGGACCATT+TGG 0.375344 1_1:-62912328 None:intergenic
AAGAGATTTAATATCTGAAC+CGG 0.376317 1_1:-62909919 None:intergenic
CGAATTCGTGATTCCGTGCT+TGG 0.380874 1_1:+62914459 Msa0034940:CDS
TGTATCTTATAGATTGTTCC+AGG 0.381127 1_1:+62912757 Msa0034940:intron
ACAGCCATCCAAAACTTTGA+TGG 0.383081 1_1:+62912160 Msa0034940:CDS
GACTGGCAGACCCATCCTTC+AGG 0.389756 1_1:+62919043 Msa0034940:CDS
GTGCTTGGTGGATCTCCATT+TGG 0.393201 1_1:+62914474 Msa0034940:CDS
TACAATTGAGTTTCGTAAGA+TGG 0.394970 1_1:+62912345 Msa0034940:CDS
TGTACTGGTTTGCAGTTACC+TGG 0.404064 1_1:+62910277 Msa0034940:CDS
TTAGGGACACCCCAAAGAAC+AGG 0.407237 1_1:-62912286 None:intergenic
TGTTAAGAGTTCAAAATATG+AGG 0.409680 1_1:+62919843 Msa0034940:CDS
AAAGAAAAGGATGGAGTTGA+TGG 0.412794 1_1:+62913888 Msa0034940:CDS
GTTCTTTGGGGTGTCCCTAA+AGG 0.412927 1_1:+62912289 Msa0034940:CDS
ATCCATGCTTTCTGCATCAA+TGG 0.413531 1_1:+62914940 Msa0034940:CDS
TGCCAACATTTCAATTTGCT+GGG 0.414102 1_1:+62911638 Msa0034940:CDS
ATGTTGATCATCATCAAAAT+GGG 0.418159 1_1:+62908618 Msa0034940:CDS
CTATAACACTTGTTGCCAAA+TGG 0.418707 1_1:-62918028 None:intergenic
ACAAACCACTTCCATTTCTC+AGG 0.419589 1_1:+62908393 Msa0034940:CDS
GTTTATTAGATTGGAATGGC+TGG 0.421115 1_1:+62915681 Msa0034940:intron
ACCTGATGGATGGGAAAATC+TGG 0.421396 1_1:+62910886 Msa0034940:CDS
TCAGAGAAAGAATGTAAAAT+GGG 0.423721 1_1:-62910920 None:intergenic
CATATATGAATTGCATATAA+GGG 0.427160 1_1:+62910949 Msa0034940:CDS
AGCTGTATCACTTTATTTGT+GGG 0.427599 1_1:+62910357 Msa0034940:CDS
AAGGATGGGTCTGCCAGTCT+TGG 0.429846 1_1:-62919039 None:intergenic
TTCAACAGAGGAAGAAGAAA+GGG 0.430859 1_1:-62908371 None:intergenic
AAGAATACCTTATACGCAAC+AGG 0.431710 1_1:-62919110 None:intergenic
ATTTCGAATTCTCAAATTCA+AGG 0.432314 1_1:+62908680 Msa0034940:CDS
GTTCCATGATCATAGCCATT+AGG 0.433887 1_1:-62914902 None:intergenic
AAGCTGTATCACTTTATTTG+TGG 0.434562 1_1:+62910356 Msa0034940:CDS
ACACTGGGCAGTCAATTATA+AGG 0.435933 1_1:+62912888 Msa0034940:CDS
TCCTTTGAGGCCTGAAGGAT+GGG 0.439467 1_1:-62919053 None:intergenic
ACAATCATTTGCAGGGAAAT+GGG 0.440654 1_1:+62912567 Msa0034940:CDS
GAAGAAGAAGAAAGAGGTGG+TGG 0.442499 1_1:-62908346 None:intergenic
TTGCAGGCTCTTAGTCATAC+TGG 0.444576 1_1:+62912518 Msa0034940:intron
TACTGCGAGTGAGCATTCTA+TGG 0.445904 1_1:+62912837 Msa0034940:CDS
TCTGATAGATACGTCGGTAC+TGG 0.447407 1_1:+62912096 Msa0034940:intron
TGAACATTCTGTCCTTGATA+AGG 0.447650 1_1:+62912598 Msa0034940:CDS
TACATCTATAAGCACCCATC+AGG 0.449510 1_1:+62910511 Msa0034940:CDS
TCACTCAATCTCTTATTGCT+TGG 0.455402 1_1:+62908594 Msa0034940:CDS
TAAGCATACCCTCTAGCATA+TGG 0.455428 1_1:-62910685 None:intergenic
AATTAAGCTTGAAGAGGATA+AGG 0.459535 1_1:+62909285 Msa0034940:CDS
TGAATGTGAATGCTTTGTTT+CGG 0.461091 1_1:+62919936 Msa0034940:three_prime_UTR
ATGTCAATACCTCTTGTCCT+TGG 0.461640 1_1:-62915734 None:intergenic
TTATCTTGCCTTCACTTTGA+CGG 0.463728 1_1:+62911392 Msa0034940:CDS
CAGCCTAATGGCTATGATCA+TGG 0.464027 1_1:+62914899 Msa0034940:intron
TACCTCTTGTCCTTGGGAGT+TGG 0.464514 1_1:-62915727 None:intergenic
TTTCAACCCGCGAAGTGCTC+GGG 0.465175 1_1:-62910645 None:intergenic
CACGGTGTTTGGAGAACTAA+AGG 0.468439 1_1:+62910571 Msa0034940:CDS
ATCGAGATTCATACAACTCC+GGG 0.468527 1_1:+62918366 Msa0034940:CDS
GCTTGTTGCTGATCTGAATC+AGG 0.471188 1_1:-62912130 None:intergenic
GTATAGCATTTGCCGTCCTC+AGG 0.472135 1_1:-62919146 None:intergenic
ATTCATACAACTCCGGGGAT+TGG 0.472633 1_1:+62918372 Msa0034940:CDS
TGCATCAATGGATCACATCC+AGG 0.473959 1_1:+62914952 Msa0034940:CDS
GATAATTCCTGACCTTATCA+AGG 0.480992 1_1:-62912610 None:intergenic
GAGGACGGCAAATGCTATAC+AGG 0.481199 1_1:+62919149 Msa0034940:CDS
GGGTATGAGGCAAATGCAAC+GGG 0.483297 1_1:-62917620 None:intergenic
CCAACGTTTAACAAAAGAAA+AGG 0.483690 1_1:+62913875 Msa0034940:CDS
ATCTTGCTGGAACACAAATT+GGG 0.485543 1_1:+62914131 Msa0034940:CDS
TACAGTCTCTATGGGGTATG+AGG 0.485942 1_1:-62917633 None:intergenic
TGTCAATACCTCTTGTCCTT+GGG 0.487085 1_1:-62915733 None:intergenic
TGTTGAAGAGGGTGGCCAAA+TGG 0.487491 1_1:-62914489 None:intergenic
TTCCAGGTTACTATCTAAGA+AGG 0.491500 1_1:+62912773 Msa0034940:CDS
AGTACAGGTGGTAGCGATGA+TGG 0.492346 1_1:+62916856 Msa0034940:CDS
TCCTCGATGATCTTGTACAC+TGG 0.494343 1_1:+62912872 Msa0034940:CDS
GGGTGTTGGTCTTCCTCCAC+AGG 0.494683 1_1:+62918632 Msa0034940:CDS
AGTGAAGGACGAGGGAATGA+TGG 0.494890 1_1:-62908268 None:intergenic
ATCTCTTCTTAAATCCCAGT+TGG 0.495081 1_1:+62909935 Msa0034940:CDS
AGATTTCTTGATTGCAGGGA+AGG 0.495120 1_1:-62919690 None:intergenic
GCTAATGATCCATATGCTAG+AGG 0.495977 1_1:+62910676 Msa0034940:CDS
TGATGGAAGAAGATTGAGGT+TGG 0.496207 1_1:-62908251 None:intergenic
ATTCGTGATTCCGTGCTTGG+TGG 0.497022 1_1:+62914462 Msa0034940:CDS
ACCCCAGCAAATTGAAATGT+TGG 0.497846 1_1:-62911640 None:intergenic
GAAAGTGATTGTACCTGAAC+GGG 0.499135 1_1:-62919723 None:intergenic
TTGAAGATTTCTTGATTGCA+GGG 0.499401 1_1:-62919694 None:intergenic
TATGACAAAGTTGTAAGTAC+AGG 0.499643 1_1:+62916841 Msa0034940:CDS
ACTCCGGGGATTGGTTCAAC+AGG 0.500414 1_1:+62918381 Msa0034940:CDS
GAGATGCAGGATAAACCATT+TGG 0.500912 1_1:+62918013 Msa0034940:CDS
TACTGGCCTTCATGTTGTGT+TGG 0.501067 1_1:+62912535 Msa0034940:CDS
GGGTCGGAAGTATTAACATA+TGG 0.501335 1_1:+62917590 Msa0034940:CDS
ATCCTTTGAGGCCTGAAGGA+TGG 0.501907 1_1:-62919054 None:intergenic
GTTTGAATAAACCTGAGAAA+TGG 0.502202 1_1:-62908404 None:intergenic
AGAAATTGTCCATTGTAGCT+AGG 0.503045 1_1:-62919083 None:intergenic
TCAGTGTGGCTGAGAGATGC+AGG 0.503417 1_1:+62918000 Msa0034940:CDS
AAGAAGAAGAAAGAGGTGGT+GGG 0.504187 1_1:-62908345 None:intergenic
TACATACAATTCCAATAACT+GGG 0.506875 1_1:+62918611 Msa0034940:CDS
GCTCAGCTGATGAGAAATGC+AGG 0.508969 1_1:+62910251 Msa0034940:intron
AGAAGAAGAAAGAGGTGGTG+GGG 0.511100 1_1:-62908344 None:intergenic
AAGCATCTTTGCTGGAAAGT+AGG 0.511681 1_1:-62908649 None:intergenic
GTTCAACAGAGGAAGAAGAA+AGG 0.513430 1_1:-62908372 None:intergenic
GCTAGGATGTCAATCCTTTG+AGG 0.514911 1_1:-62919066 None:intergenic
AAAGAGAACTGGAGAAATGT+TGG 0.516865 1_1:+62911673 Msa0034940:CDS
CCTCGATGATCTTGTACACT+GGG 0.517069 1_1:+62912873 Msa0034940:CDS
TGAATGCTTTGTTTCGGGTG+TGG 0.517576 1_1:+62919942 Msa0034940:three_prime_UTR
CATAGAAATTGTTCCTCTTG+AGG 0.518870 1_1:+62910543 Msa0034940:CDS
GAGAAATTTCCACACATTCG+AGG 0.519760 1_1:+62909873 Msa0034940:CDS
TCACAACACTGGACCATCGC+TGG 0.519979 1_1:+62919457 Msa0034940:CDS
ATGGTCATGATGGCTTTCCT+GGG 0.520278 1_1:+62919510 Msa0034940:CDS
TTAAGCAGACTTTCATCAGA+TGG 0.520876 1_1:+62910821 Msa0034940:intron
GTAGTAGATAAATGGAGAGG+TGG 0.523775 1_1:+62916814 Msa0034940:CDS
CTAAAGAAATTATCAAGTGC+GGG 0.526067 1_1:+62911595 Msa0034940:CDS
TCATGTTTATTAGATTGGAA+TGG 0.526733 1_1:+62915677 Msa0034940:intron
GATTTCTTGATTGCAGGGAA+GGG 0.527032 1_1:-62919689 None:intergenic
ACCCATCCTTCAGGCCTCAA+AGG 0.528067 1_1:+62919052 Msa0034940:CDS
AGGACAGAATGTTCATCAAA+GGG 0.528465 1_1:-62912590 None:intergenic
GATTGAGGTTGGAAATTGAA+GGG 0.530581 1_1:-62908240 None:intergenic
TATGGTGAAGGATGGGACTT+TGG 0.531936 1_1:+62914064 Msa0034940:CDS
CTAACAAATGATATTTCTTG+TGG 0.533664 1_1:-62919666 None:intergenic
TTAGAGAAGAGTGGCAGCAA+TGG 0.535689 1_1:+62916789 Msa0034940:intron
GTCACAAAACCCTGTTGAAG+AGG 0.535691 1_1:-62914501 None:intergenic
AATTCCAATAACTGGGGTGT+TGG 0.536708 1_1:+62918618 Msa0034940:CDS
AAAACAGATATGGTGAAGGA+TGG 0.537753 1_1:+62914056 Msa0034940:intron
CTATGGGATCATCTCCTGAT+GGG 0.539056 1_1:-62910525 None:intergenic
GGAAGGTACAGTGAAGGACG+AGG 0.540346 1_1:-62908277 None:intergenic
TTTGAAAATTAAGCTTGAAG+AGG 0.540775 1_1:+62909279 Msa0034940:CDS
GTCAATCCTTTGAGGCCTGA+AGG 0.542746 1_1:-62919058 None:intergenic
GATACTCCGCTCAAAATCAC+TGG 0.543487 1_1:+62918343 Msa0034940:CDS
TATACCACCCGAGCACTTCG+CGG 0.543517 1_1:+62910638 Msa0034940:CDS
AGATTGAGGTTGGAAATTGA+AGG 0.543706 1_1:-62908241 None:intergenic
AATACACTTACAGTCTCTAT+GGG 0.543898 1_1:-62917641 None:intergenic
TGGAAAGTAGTAGATGAAGA+AGG 0.545285 1_1:-62908298 None:intergenic
AGAAAATATACTTGAGCGGT+AGG 0.545851 1_1:-62910382 None:intergenic
TCTTCATTATATGACCCATA+AGG 0.548661 1_1:-62913339 None:intergenic
TTTCAGAATGAAACCAAGAC+TGG 0.549922 1_1:+62919026 Msa0034940:intron
AGCTATGCAAGTAATCCAAA+TGG 0.550803 1_1:+62912313 Msa0034940:CDS
TCTTACGAAACTCAATTGTA+CGG 0.551046 1_1:-62912342 None:intergenic
TCCATCAGGTTTCAACTCAT+CGG 0.551583 1_1:-62910873 None:intergenic
TAAGCTCACAATGTCAAAGA+GGG 0.552824 1_1:-62917857 None:intergenic
AAGGACAGAATGTTCATCAA+AGG 0.554747 1_1:-62912591 None:intergenic
GCCGTCCTCAGGCGGAAAAG+TGG 0.554849 1_1:-62919135 None:intergenic
AAGTAGTAGATGAAGAAGGA+AGG 0.555513 1_1:-62908294 None:intergenic
TCCGATGAGTTGAAACCTGA+TGG 0.558445 1_1:+62910872 Msa0034940:CDS
AAAGCTTTCAATATGCCTCC+CGG 0.559515 1_1:+62909900 Msa0034940:CDS
TCAAGAGGAACAATTTCTAT+GGG 0.559947 1_1:-62910541 None:intergenic
TCTATGGGATCATCTCCTGA+TGG 0.560305 1_1:-62910526 None:intergenic
TCTGTGCAGCCTGAATTTCG+CGG 0.561682 1_1:+62911366 Msa0034940:CDS
TCGGAAGTATTAACATATGG+TGG 0.569218 1_1:+62917593 Msa0034940:CDS
CTAATGATCCATATGCTAGA+GGG 0.569869 1_1:+62910677 Msa0034940:CDS
TGAAAGTGATTGTACCTGAA+CGG 0.570977 1_1:-62919724 None:intergenic
GAGAAATGCAGGGACTGTAC+TGG 0.571550 1_1:+62910262 Msa0034940:CDS
ATCCATTGATGCAGAAAGCA+TGG 0.572725 1_1:-62914942 None:intergenic
AAACAGATATGGTGAAGGAT+GGG 0.572848 1_1:+62914057 Msa0034940:intron
GATCGAGATTCATACAACTC+CGG 0.574564 1_1:+62918365 Msa0034940:CDS
TCTAAAGAAATTATCAAGTG+CGG 0.576534 1_1:+62911594 Msa0034940:CDS
ATACCTGTTGAACCAATCCC+CGG 0.577271 1_1:-62918384 None:intergenic
ATGAGTTGAAACCTGATGGA+TGG 0.577800 1_1:+62910876 Msa0034940:CDS
CAACCCGCGAAGTGCTCGGG+TGG 0.578847 1_1:-62910642 None:intergenic
GCAGACTTTCATCAGATGGA+AGG 0.580459 1_1:+62910825 Msa0034940:intron
ACACCGTGTTCCTCCTCAAG+AGG 0.582367 1_1:-62910556 None:intergenic
ACGGTGTTTGGAGAACTAAA+GGG 0.582788 1_1:+62910572 Msa0034940:CDS
ATAAATAACAATCGCCAACT+GGG 0.583519 1_1:-62909949 None:intergenic
GCTTTGTAGCCTCGAATGTG+TGG 0.584101 1_1:-62909882 None:intergenic
GGGGTATGAGGCAAATGCAA+CGG 0.586241 1_1:-62917621 None:intergenic
AAATGGAGATCCACCAAGCA+CGG 0.587147 1_1:-62914472 None:intergenic
AGGCTGCACAGAGAGATCAT+TGG 0.587643 1_1:-62911355 None:intergenic
AAGCTTGAAGAGGATAAGGC+TGG 0.590392 1_1:+62909289 Msa0034940:CDS
AAACTTTGATGGATATAACT+GGG 0.593002 1_1:+62912171 Msa0034940:CDS
CAGCTGTGTTCGTCGAGCCA+AGG 0.598123 1_1:+62919902 Msa0034940:CDS
TTTGGCCACCCTCTTCAACA+GGG 0.599209 1_1:+62914492 Msa0034940:CDS
GAAGAAGGAAGGTACAGTGA+AGG 0.600053 1_1:-62908283 None:intergenic
ATACCACCCGAGCACTTCGC+GGG 0.601456 1_1:+62910639 Msa0034940:CDS
AACCAACTCCCAAGGACAAG+AGG 0.601989 1_1:+62915725 Msa0034940:CDS
TAGCATTTGCCGTCCTCAGG+CGG 0.604532 1_1:-62919143 None:intergenic
CGAGTACGCTTTCACAACAC+TGG 0.604677 1_1:+62919446 Msa0034940:CDS
GACAAAGTTGTAAGTACAGG+TGG 0.605664 1_1:+62916844 Msa0034940:CDS
TTAAGCTCACAATGTCAAAG+AGG 0.608541 1_1:-62917858 None:intergenic
GGTGTATTACATTTGCAGGA+AGG 0.609159 1_1:-62909312 None:intergenic
GGAAGTGGTTTGTTCAACAG+AGG 0.610644 1_1:-62908383 None:intergenic
GTTCCTCTTGAGGAGGAACA+CGG 0.610875 1_1:+62910553 Msa0034940:CDS
TTCCTTCTTAGATAGTAACC+TGG 0.611688 1_1:-62912775 None:intergenic
AAGGATTACCGTCAAAGTGA+AGG 0.612023 1_1:-62911400 None:intergenic
GCAGTAGTAGATAAATGGAG+AGG 0.618283 1_1:+62916811 Msa0034940:CDS
AAGTGTTATAGCATTATCAC+AGG 0.618531 1_1:+62918040 Msa0034940:CDS
CGTTTAACAAAAGAAAAGGA+TGG 0.620727 1_1:+62913879 Msa0034940:CDS
ATAGTGATGAGCATTGAAGA+TGG 0.621334 1_1:+62919491 Msa0034940:CDS
AGCATTGAAGATGGTCATGA+TGG 0.623024 1_1:+62919500 Msa0034940:CDS
CTCAGCTGATGAGAAATGCA+GGG 0.623428 1_1:+62910252 Msa0034940:intron
TCACAAAACCCTGTTGAAGA+GGG 0.624283 1_1:-62914500 None:intergenic
TATTCACTTTCAGACTCCGA+CGG 0.624712 1_1:+62917974 Msa0034940:intron
CGGAAGTATTAACATATGGT+GGG 0.626066 1_1:+62917594 Msa0034940:CDS
ATAAACCTGAGAAATGGAAG+TGG 0.626449 1_1:-62908398 None:intergenic
AGAAATTGTTCCTCTTGAGG+AGG 0.628595 1_1:+62910546 Msa0034940:CDS
GCCAACATTTCAATTTGCTG+GGG 0.628938 1_1:+62911639 Msa0034940:CDS
TATCTAAGAAGGAACACAGA+TGG 0.629387 1_1:+62912784 Msa0034940:CDS
ACTGTCTACAATCATTTGCA+GGG 0.631190 1_1:+62912560 Msa0034940:CDS
TGAGTTGAAACCTGATGGAT+GGG 0.632039 1_1:+62910877 Msa0034940:CDS
GTTGAGGTGTTAGAGAAGAG+TGG 0.634631 1_1:+62916780 Msa0034940:intron
GATTGACATCCTAGCTACAA+TGG 0.635719 1_1:+62919074 Msa0034940:CDS
AACTTTGATGGATATAACTG+GGG 0.637519 1_1:+62912172 Msa0034940:CDS
CAAAACCCTGTTGAAGAGGG+TGG 0.637841 1_1:-62914497 None:intergenic
TAGGGACACCCCAAAGAACA+GGG 0.638095 1_1:-62912285 None:intergenic
AAAAGCTCATCTAAAACACC+AGG 0.639357 1_1:-62910295 None:intergenic
AGGTACAACCCTGTTCTTTG+GGG 0.639374 1_1:+62912277 Msa0034940:intron
TTTGTACTAACCAACTCCCA+AGG 0.641013 1_1:+62915717 Msa0034940:CDS
CACCATTCTGATAGATACGT+CGG 0.645570 1_1:+62912090 Msa0034940:intron
TCAGCCACACTGATATCCGT+CGG 0.646177 1_1:-62917990 None:intergenic
CAGTATCCAACACAACATGA+AGG 0.650812 1_1:-62912541 None:intergenic
GGAATGATGGAAGAAGATTG+AGG 0.653567 1_1:-62908255 None:intergenic
TGTTGCTGATCTGAATCAGG+TGG 0.655693 1_1:-62912127 None:intergenic
GTGCAGCCTGAATTTCGCGG+TGG 0.661169 1_1:+62911369 Msa0034940:CDS
GAATGCGAAGTGAAGTAGTG+TGG 0.667419 1_1:-62908318 None:intergenic
TGGAAGAAAATATACTTGAG+CGG 0.673604 1_1:-62910386 None:intergenic
TGTTGATCATCATCAAAATG+GGG 0.674555 1_1:+62908619 Msa0034940:CDS
TTGCTGGAACACAAATTGGG+AGG 0.682244 1_1:+62914134 Msa0034940:CDS
GGATCCAGCTGAGACAACCC+AGG 0.682593 1_1:-62919527 None:intergenic
AGAGATTTAATATCTGAACC+GGG 0.684268 1_1:-62909918 None:intergenic
ACATACAATTCCAATAACTG+GGG 0.685335 1_1:+62918612 Msa0034940:CDS
GAAGGTACAGTGAAGGACGA+GGG 0.701785 1_1:-62908276 None:intergenic
TCATATAATGAAGAGTACAA+TGG 0.703829 1_1:+62913348 Msa0034940:CDS
ACTTTGATGGATATAACTGG+GGG 0.707527 1_1:+62912173 Msa0034940:CDS
TCTGAGAAAAGTGCACCGAG+TGG 0.708335 1_1:-62910331 None:intergenic
ACAGGTGGTAGCGATGATGG+CGG 0.714411 1_1:+62916859 Msa0034940:CDS
TGTTGGCAATAGATGGACAT+GGG 0.721283 1_1:-62911623 None:intergenic
ATGTTGGCAATAGATGGACA+TGG 0.721857 1_1:-62911624 None:intergenic
GACTCCGACGGATATCAGTG+TGG 0.731354 1_1:+62917986 Msa0034940:intron
ATGACTCCAGAAACCAGCGA+TGG 0.732163 1_1:-62919470 None:intergenic
ATACACTTACAGTCTCTATG+GGG 0.740403 1_1:-62917640 None:intergenic
GATTTAATATCTGAACCGGG+AGG 0.748409 1_1:-62909915 None:intergenic
TCGAGATTCATACAACTCCG+GGG 0.753701 1_1:+62918367 Msa0034940:CDS
CCCAGTGTACAAGATCATCG+AGG 0.774079 1_1:-62912873 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTCTATAAAATTATATT+TGG - chr1_1:62909025-62909044 None:intergenic 10.0%
!! AATAGATTATAGAAATAATT+TGG - chr1_1:62910732-62910751 None:intergenic 10.0%
!!! ATTGGTAATATAAATTTAAA+AGG + chr1_1:62911864-62911883 Msa0034940:intron 10.0%
!! ATATAAATTTAAAAGGTTAA+AGG + chr1_1:62911871-62911890 Msa0034940:intron 10.0%
!! TATAAATTTAAAAGGTTAAA+GGG + chr1_1:62911872-62911891 Msa0034940:intron 10.0%
!!! ATATTTTTTAGAAAATTGAA+GGG - chr1_1:62913239-62913258 None:intergenic 10.0%
!!! AATATTATTTCTTAATTACT+AGG - chr1_1:62915857-62915876 None:intergenic 10.0%
!!! ATTTTTTTTTCATGATATTT+TGG + chr1_1:62917417-62917436 Msa0034940:intron 10.0%
!! TAAAATCATAATAAGTTATT+TGG - chr1_1:62917560-62917579 None:intergenic 10.0%
!!! ATTTTTTTTTTTTTATGACT+AGG + chr1_1:62919573-62919592 Msa0034940:intron 10.0%
!! TGTAATTATTACATTATTAT+CGG - chr1_1:62919976-62919995 None:intergenic 10.0%
!!! AAAAAAAAGGATTTTTATTC+AGG - chr1_1:62908493-62908512 None:intergenic 15.0%
!! AGAAATTCGAATTAAAAAAA+AGG - chr1_1:62908506-62908525 None:intergenic 15.0%
!! CAAAAAAATTATTTGTGTTT+GGG + chr1_1:62908885-62908904 Msa0034940:intron 15.0%
!!! TAGTTGATTTTAATAGTTTA+GGG - chr1_1:62909461-62909480 None:intergenic 15.0%
!!! ATTTTGTATTTAATCACTTA+CGG - chr1_1:62910755-62910774 None:intergenic 15.0%
!!! TAATTTTATCATAGTTATCT+TGG + chr1_1:62910996-62911015 Msa0034940:intron 15.0%
!!! TATTTTAATTTTAGTGCTTA+AGG - chr1_1:62911046-62911065 None:intergenic 15.0%
!!! ATTAACTACTTTAAAGATTA+TGG - chr1_1:62911211-62911230 None:intergenic 15.0%
!! ATTCAAATAAGAAGATAATA+AGG - chr1_1:62911531-62911550 None:intergenic 15.0%
!! AAAAAAAGTTATAAGAGTAA+AGG - chr1_1:62911807-62911826 None:intergenic 15.0%
!!! CATATTTTTTAGAAAATTGA+AGG - chr1_1:62913240-62913259 None:intergenic 15.0%
!! TTATAAAAAAATGCAAGATA+TGG + chr1_1:62913421-62913440 Msa0034940:intron 15.0%
!!! TTTTGTATTGTCAAAAAAAA+AGG + chr1_1:62913791-62913810 Msa0034940:intron 15.0%
!! AAAATAAAGAAATTAATACG+AGG - chr1_1:62914025-62914044 None:intergenic 15.0%
!! ATTTAATTGAAAAACAGATA+TGG + chr1_1:62914046-62914065 Msa0034940:intron 15.0%
!!! ATCTTTCAAGTTTAAAATAT+TGG + chr1_1:62915000-62915019 Msa0034940:intron 15.0%
!!! ATAAATTTCCAAGAAAATTT+TGG + chr1_1:62916088-62916107 Msa0034940:intron 15.0%
!! AAAATTAGAAATGGTTATTT+GGG - chr1_1:62916154-62916173 None:intergenic 15.0%
!!! ATATTTTATAATAGCAATCA+TGG - chr1_1:62916263-62916282 None:intergenic 15.0%
!! AGTATTATAACAACATATAT+TGG + chr1_1:62917109-62917128 Msa0034940:intron 15.0%
!! GTATTATAACAACATATATT+GGG + chr1_1:62917110-62917129 Msa0034940:intron 15.0%
!!! TAACTTATTATGATTTTATC+AGG + chr1_1:62917562-62917581 Msa0034940:intron 15.0%
!! ATAAAAACTTATTATCTGTT+GGG + chr1_1:62918910-62918929 Msa0034940:intron 15.0%
!! AATGATAATTCATAAATGCA+GGG - chr1_1:62908446-62908465 None:intergenic 20.0%
!! GCAAAAAAATTATTTGTGTT+TGG + chr1_1:62908884-62908903 Msa0034940:intron 20.0%
!!! ATTTTCTCAAGATATTATGA+GGG + chr1_1:62909119-62909138 Msa0034940:intron 20.0%
!! TCTTTCTATTTGTAATTGAT+AGG + chr1_1:62909250-62909269 Msa0034940:intron 20.0%
!!! GTAGTTGATTTTAATAGTTT+AGG - chr1_1:62909462-62909481 None:intergenic 20.0%
!!! TGTGTTTTTTTATTTTACAG+GGG - chr1_1:62909558-62909577 None:intergenic 20.0%
!!! CTGTGTTTTTTTATTTTACA+GGG - chr1_1:62909559-62909578 None:intergenic 20.0%
!!! TCTGTGTTTTTTTATTTTAC+AGG - chr1_1:62909560-62909579 None:intergenic 20.0%
!! AACTATTAAAATCGACTAAA+AGG - chr1_1:62909726-62909745 None:intergenic 20.0%
!! TTATTTATGATTGTAAGTAC+CGG + chr1_1:62909964-62909983 Msa0034940:intron 20.0%
!! GGAGTATATTTAAAAGTTAT+AGG + chr1_1:62910006-62910025 Msa0034940:intron 20.0%
!! GAAATAACATAAAATTCCTA+TGG + chr1_1:62910411-62910430 Msa0034940:intron 20.0%
!! TCTATCTTAATATGAAGATA+AGG - chr1_1:62910448-62910467 None:intergenic 20.0%
!!! ATCTTTGCACATTATTTTTT+GGG + chr1_1:62910467-62910486 Msa0034940:intron 20.0%
!! CATATATGAATTGCATATAA+GGG + chr1_1:62910949-62910968 Msa0034940:CDS 20.0%
!!! ACTTTAAAGATTATGGAAAT+TGG - chr1_1:62911204-62911223 None:intergenic 20.0%
!! TTCTTGAATGAGTAATATTT+GGG + chr1_1:62911781-62911800 Msa0034940:intron 20.0%
!! CTCATTTGCAAATTAAAAAT+TGG + chr1_1:62911846-62911865 Msa0034940:intron 20.0%
!!! ATTTTATGTATATCTAGTGT+TGG + chr1_1:62911896-62911915 Msa0034940:intron 20.0%
!! TTTATGTTCTCATCTTAAAA+AGG + chr1_1:62912257-62912276 Msa0034940:intron 20.0%
!! TATCGATAAATTTAACATCA+GGG - chr1_1:62912398-62912417 None:intergenic 20.0%
!! ATATCGATAAATTTAACATC+AGG - chr1_1:62912399-62912418 None:intergenic 20.0%
!! CAAAATCATATATATCAAAG+AGG - chr1_1:62912992-62913011 None:intergenic 20.0%
!! AAATCAATGATGTACTATTT+AGG - chr1_1:62913054-62913073 None:intergenic 20.0%
!! GATGAATGAAAATCAATTTA+TGG - chr1_1:62913273-62913292 None:intergenic 20.0%
!!! TTTTTTTCTTTTCAGATTGA+TGG + chr1_1:62913304-62913323 Msa0034940:intron 20.0%
!!! TTTTTTCTTTTCAGATTGAT+GGG + chr1_1:62913305-62913324 Msa0034940:intron 20.0%
!! AAAGAATTCTTAAATGAATG+TGG + chr1_1:62913621-62913640 Msa0034940:intron 20.0%
!!! TATTTTTCCATGTTAATTTG+TGG - chr1_1:62914803-62914822 None:intergenic 20.0%
!! AAATAGTTAGCATTAAGAAT+GGG + chr1_1:62915187-62915206 Msa0034940:intron 20.0%
!! TAGATAATCGATAAAATTTG+TGG - chr1_1:62915412-62915431 None:intergenic 20.0%
!! TTCTTTCATGTTTATTAGAT+TGG + chr1_1:62915672-62915691 Msa0034940:intron 20.0%
!! GAAAATTAGAAATGGTTATT+TGG - chr1_1:62916155-62916174 None:intergenic 20.0%
!!! TTACTTCTGAAAATTAGAAA+TGG - chr1_1:62916163-62916182 None:intergenic 20.0%
!! TATGTATTGTGTGAATAAAA+GGG - chr1_1:62916206-62916225 None:intergenic 20.0%
!! TTATGTATTGTGTGAATAAA+AGG - chr1_1:62916207-62916226 None:intergenic 20.0%
!!! AAAATCCTAAATTTTTTGCA+GGG + chr1_1:62916603-62916622 Msa0034940:intron 20.0%
!! TAAAAAAAGGAAGGAATAAA+TGG - chr1_1:62917269-62917288 None:intergenic 20.0%
!!! TTTTCATTATTGTGCATATT+AGG - chr1_1:62917508-62917527 None:intergenic 20.0%
!! ATGCACAATAATGAAAATAT+TGG + chr1_1:62917511-62917530 Msa0034940:intron 20.0%
!! AATATAGAGAATTATAGAAG+TGG - chr1_1:62917695-62917714 None:intergenic 20.0%
!! TATTTATACTGATCTTATGT+TGG + chr1_1:62918105-62918124 Msa0034940:intron 20.0%
!! TATCATCTGTATCATTATAA+TGG + chr1_1:62918477-62918496 Msa0034940:intron 20.0%
!! GATAAAAACTTATTATCTGT+TGG + chr1_1:62918909-62918928 Msa0034940:intron 20.0%
!!! AGCTTTAATATTTTGATTTC+TGG + chr1_1:62919408-62919427 Msa0034940:intron 20.0%
!!! CAATATGTTTTAACATACAT+GGG - chr1_1:62919551-62919570 None:intergenic 20.0%
!!! ACAATATGTTTTAACATACA+TGG - chr1_1:62919552-62919571 None:intergenic 20.0%
!! TCTACTTATAATTTCAAATG+AGG + chr1_1:62919768-62919787 Msa0034940:intron 20.0%
! ATGATAATTCATAAATGCAG+GGG - chr1_1:62908445-62908464 None:intergenic 25.0%
! CAATGATAATTCATAAATGC+AGG - chr1_1:62908447-62908466 None:intergenic 25.0%
! AATGTTGATCATCATCAAAA+TGG + chr1_1:62908617-62908636 Msa0034940:CDS 25.0%
! ATGTTGATCATCATCAAAAT+GGG + chr1_1:62908618-62908637 Msa0034940:CDS 25.0%
! ATTTCGAATTCTCAAATTCA+AGG + chr1_1:62908680-62908699 Msa0034940:CDS 25.0%
! CTCATAATATCTTGAGAAAA+TGG - chr1_1:62909120-62909139 None:intergenic 25.0%
!! CATTTTCTCAAGATATTATG+AGG + chr1_1:62909118-62909137 Msa0034940:intron 25.0%
! TTTGAAAATTAAGCTTGAAG+AGG + chr1_1:62909279-62909298 Msa0034940:CDS 25.0%
! AAGACGATAAAGACTAAAAA+AGG - chr1_1:62909336-62909355 None:intergenic 25.0%
!! AACCATGGGAATATATTTTA+GGG - chr1_1:62909489-62909508 None:intergenic 25.0%
!! AAACCATGGGAATATATTTT+AGG - chr1_1:62909490-62909509 None:intergenic 25.0%
!! TATATGAGGTATTAAACCAT+GGG - chr1_1:62909503-62909522 None:intergenic 25.0%
!! TTATATGAGGTATTAAACCA+TGG - chr1_1:62909504-62909523 None:intergenic 25.0%
! ATGAAGAATCCAAAATTACA+GGG - chr1_1:62909588-62909607 None:intergenic 25.0%
! TATGAAGAATCCAAAATTAC+AGG - chr1_1:62909589-62909608 None:intergenic 25.0%
!!! TTCATATTTTAACCCTTTAC+AGG + chr1_1:62909603-62909622 Msa0034940:intron 25.0%
!!! TCATATTTTAACCCTTTACA+GGG + chr1_1:62909604-62909623 Msa0034940:intron 25.0%
! TAATAGTTTAGTGACCAAAT+TGG + chr1_1:62909738-62909757 Msa0034940:intron 25.0%
!! TATTCTTCTTTTTGACAATG+TGG + chr1_1:62909792-62909811 Msa0034940:intron 25.0%
!!! TCTGCAAACTTTTTGTTTAT+AGG + chr1_1:62909845-62909864 Msa0034940:intron 25.0%
! AAGAGATTTAATATCTGAAC+CGG - chr1_1:62909922-62909941 None:intergenic 25.0%
!! CACTATATTTGGTGATATTT+GGG + chr1_1:62910139-62910158 Msa0034940:intron 25.0%
! ATTGTAATCTTGTTAAGTGT+GGG + chr1_1:62910170-62910189 Msa0034940:intron 25.0%
! AGTATAAACTAATGACTACA+AGG - chr1_1:62910207-62910226 None:intergenic 25.0%
!!! GATGAGCTTTTTTCATATAA+TGG + chr1_1:62910307-62910326 Msa0034940:CDS 25.0%
!!! GGAATTTTATGTTATTTCAG+TGG - chr1_1:62910409-62910428 None:intergenic 25.0%
!!! GATCTTTGCACATTATTTTT+TGG + chr1_1:62910466-62910485 Msa0034940:intron 25.0%
!! AATTTGGAATAGACAATCAA+AGG - chr1_1:62910716-62910735 None:intergenic 25.0%
! GTTAAAACAACAAATCATTC+GGG - chr1_1:62910785-62910804 None:intergenic 25.0%
! GGTTAAAACAACAAATCATT+CGG - chr1_1:62910786-62910805 None:intergenic 25.0%
! GCTTAATACACAAAAATAAG+AGG - chr1_1:62910807-62910826 None:intergenic 25.0%
! TCAGAGAAAGAATGTAAAAT+GGG - chr1_1:62910923-62910942 None:intergenic 25.0%
! ATCAGAGAAAGAATGTAAAA+TGG - chr1_1:62910924-62910943 None:intergenic 25.0%
! GCATATATGAATTGCATATA+AGG + chr1_1:62910948-62910967 Msa0034940:CDS 25.0%
! AATATAAGCCTAAAGATATC+TGG - chr1_1:62911148-62911167 None:intergenic 25.0%
!!! TTGTTTTTAGAAGTATCACT+TGG + chr1_1:62911247-62911266 Msa0034940:intron 25.0%
!!! TGTTTTTAGAAGTATCACTT+GGG + chr1_1:62911248-62911267 Msa0034940:intron 25.0%
! CCATATCTATTCATAAAAGA+TGG - chr1_1:62911479-62911498 None:intergenic 25.0%
!! CCATCTTTTATGAATAGATA+TGG + chr1_1:62911476-62911495 Msa0034940:intron 25.0%
!!! ATCTACATGCATATTTTTGA+AGG + chr1_1:62911552-62911571 Msa0034940:intron 25.0%
! TCTAAAGAAATTATCAAGTG+CGG + chr1_1:62911594-62911613 Msa0034940:CDS 25.0%
! GTTCTTGAATGAGTAATATT+TGG + chr1_1:62911780-62911799 Msa0034940:intron 25.0%
! TGAAGTCAGATATATACAAA+AGG - chr1_1:62912072-62912091 None:intergenic 25.0%
!! AGTTATATCCATCAAAGTTT+TGG - chr1_1:62912171-62912190 None:intergenic 25.0%
!! AAAACTTTGATGGATATAAC+TGG + chr1_1:62912170-62912189 Msa0034940:CDS 25.0%
!! AAACTTTGATGGATATAACT+GGG + chr1_1:62912171-62912190 Msa0034940:CDS 25.0%
!!! GTTGTAGTTAATTTGTTATG+TGG + chr1_1:62912423-62912442 Msa0034940:intron 25.0%
! ATTTAACCAACAATAGACAA+TGG - chr1_1:62912459-62912478 None:intergenic 25.0%
!! ATAATGGAGAAATACTCAAT+AGG - chr1_1:62912703-62912722 None:intergenic 25.0%
! TAGATAGGCTAACAAAATAA+TGG - chr1_1:62912719-62912738 None:intergenic 25.0%
! GATGTACTATTTAGGAATTT+AGG - chr1_1:62913046-62913065 None:intergenic 25.0%
! GATAAAAAATCCTTCAAATC+AGG - chr1_1:62913197-62913216 None:intergenic 25.0%
!! TTGAAGGGAAAGTATAATTA+AGG - chr1_1:62913224-62913243 None:intergenic 25.0%
!! TCATATAATGAAGAGTACAA+TGG + chr1_1:62913348-62913367 Msa0034940:CDS 25.0%
!!! TGCTTTAATGTTATTTCACT+CGG + chr1_1:62913472-62913491 Msa0034940:intron 25.0%
! AATCTGACATCATAAATCAA+TGG + chr1_1:62913587-62913606 Msa0034940:intron 25.0%
! AAATAAATGAATGCATGACA+AGG + chr1_1:62913655-62913674 Msa0034940:intron 25.0%
! AATCAAAGAATCAATACAAG+CGG - chr1_1:62913753-62913772 None:intergenic 25.0%
!!! TCTGGTTTAAATGTTCTTTT+TGG + chr1_1:62914237-62914256 Msa0034940:intron 25.0%
! TGACATGAATAATTATCAGT+AGG - chr1_1:62914661-62914680 None:intergenic 25.0%
!! TGTCACAGATTGTATATTTT+TGG + chr1_1:62914676-62914695 Msa0034940:intron 25.0%
! TTCATTGTAAAGTGGAAAAT+GGG - chr1_1:62914739-62914758 None:intergenic 25.0%
!! AAACTTGATATTTTCATGGT+TGG + chr1_1:62915065-62915084 Msa0034940:intron 25.0%
! CATTCTTAATGCTAACTATT+TGG - chr1_1:62915188-62915207 None:intergenic 25.0%
! CAAATAGTTAGCATTAAGAA+TGG + chr1_1:62915186-62915205 Msa0034940:intron 25.0%
! AATAGTTAGCATTAAGAATG+GGG + chr1_1:62915188-62915207 Msa0034940:intron 25.0%
!! AAATTCTCTGTGCAAAATTT+TGG + chr1_1:62915223-62915242 Msa0034940:intron 25.0%
! CTTATATGTACCAAATTGAT+CGG - chr1_1:62915643-62915662 None:intergenic 25.0%
! TCATGTTTATTAGATTGGAA+TGG + chr1_1:62915677-62915696 Msa0034940:intron 25.0%
! TTATTCAAATGAAACAGACA+TGG - chr1_1:62915825-62915844 None:intergenic 25.0%
!!! ATCTAGTGTTTTCTTGTTTT+AGG + chr1_1:62915910-62915929 Msa0034940:intron 25.0%
!!! CTGCAAAAAATTTAGGATTT+TGG - chr1_1:62916604-62916623 None:intergenic 25.0%
!!! CAAAATCCTAAATTTTTTGC+AGG + chr1_1:62916602-62916621 Msa0034940:intron 25.0%
! TATAACAACATATATTGGGT+TGG + chr1_1:62917114-62917133 Msa0034940:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr1_1:62917169-62917188 None:intergenic 25.0%
!! CTAGCTGTAAATTTTCTTTT+AGG - chr1_1:62917333-62917352 None:intergenic 25.0%
! CTAAAAGAAAATTTACAGCT+AGG + chr1_1:62917331-62917350 Msa0034940:intron 25.0%
! ATGATAATATATCTTAGTCC+TGG - chr1_1:62917366-62917385 None:intergenic 25.0%
! ATATTATCATACATGCTCTA+TGG + chr1_1:62917376-62917395 Msa0034940:intron 25.0%
!! TTATGATTTTATCAGGTGAA+AGG + chr1_1:62917569-62917588 Msa0034940:intron 25.0%
!! TATGATTTTATCAGGTGAAA+GGG + chr1_1:62917570-62917589 Msa0034940:intron 25.0%
! AATTATAGAAGTGGAAAAGT+GGG - chr1_1:62917686-62917705 None:intergenic 25.0%
!!! CTTTAGTTGTTTACTTTTTC+AGG + chr1_1:62917804-62917823 Msa0034940:intron 25.0%
! AGCTTAAAGGTAATTTGATA+TGG + chr1_1:62917874-62917893 Msa0034940:intron 25.0%
!!! ACATGCAGTTTATTTTTTTC+TGG + chr1_1:62917923-62917942 Msa0034940:intron 25.0%
!!! CATGCAGTTTATTTTTTTCT+GGG + chr1_1:62917924-62917943 Msa0034940:intron 25.0%
! ACTAAAGAATTTCTGTTCTT+AGG + chr1_1:62918292-62918311 Msa0034940:intron 25.0%
! CTAAAGAATTTCTGTTCTTA+GGG + chr1_1:62918293-62918312 Msa0034940:intron 25.0%
! TTACATACAATTCCAATAAC+TGG + chr1_1:62918610-62918629 Msa0034940:CDS 25.0%
! TACATACAATTCCAATAACT+GGG + chr1_1:62918611-62918630 Msa0034940:CDS 25.0%
!! GTTTTTATCAATGTAATGCT+GGG - chr1_1:62918898-62918917 None:intergenic 25.0%
!! AGTTTTTATCAATGTAATGC+TGG - chr1_1:62918899-62918918 None:intergenic 25.0%
!! GTTTCATTCTGAAAAGTTAA+AGG - chr1_1:62919020-62919039 None:intergenic 25.0%
! CTAACAAATGATATTTCTTG+TGG - chr1_1:62919669-62919688 None:intergenic 25.0%
! TGTTAAGAGTTCAAAATATG+AGG + chr1_1:62919843-62919862 Msa0034940:CDS 25.0%
GTTTGAATAAACCTGAGAAA+TGG - chr1_1:62908407-62908426 None:intergenic 30.0%
TAACAAATTATCCTGCATCT+GGG - chr1_1:62908552-62908571 None:intergenic 30.0%
ATAACAAATTATCCTGCATC+TGG - chr1_1:62908553-62908572 None:intergenic 30.0%
TATTGTACTCAAGAGCTTAT+TGG + chr1_1:62908570-62908589 Msa0034940:CDS 30.0%
ATTGTACTCAAGAGCTTATT+GGG + chr1_1:62908571-62908590 Msa0034940:CDS 30.0%
TGTTGATCATCATCAAAATG+GGG + chr1_1:62908619-62908638 Msa0034940:CDS 30.0%
!! ACATTTGAAAAGCACTTCTA+AGG + chr1_1:62909057-62909076 Msa0034940:intron 30.0%
!! AAAATGGAAGTGGATTAAGA+GGG - chr1_1:62909104-62909123 None:intergenic 30.0%
ATATCTTGAGAAAATGGAAG+TGG - chr1_1:62909114-62909133 None:intergenic 30.0%
AATTAAGCTTGAAGAGGATA+AGG + chr1_1:62909285-62909304 Msa0034940:CDS 30.0%
! AAAAGGTGTATTACATTTGC+AGG - chr1_1:62909319-62909338 None:intergenic 30.0%
!! AAATACCTCTGATTGCTTTT+AGG + chr1_1:62909385-62909404 Msa0034940:intron 30.0%
TAATAGTTTAGGGACCAAAT+TGG - chr1_1:62909451-62909470 None:intergenic 30.0%
TCATATAACCCCTAATAGTT+GGG + chr1_1:62909516-62909535 Msa0034940:intron 30.0%
!!! CATATTTTAACCCTTTACAG+GGG + chr1_1:62909605-62909624 Msa0034940:intron 30.0%
TCAAATAGCTCCAGTAATTT+GGG - chr1_1:62909647-62909666 None:intergenic 30.0%
CTATCATTGTTTCACCAATT+TGG - chr1_1:62909755-62909774 None:intergenic 30.0%
GGTGAAACAATGATAGTTTA+TGG + chr1_1:62909759-62909778 Msa0034940:intron 30.0%
!! GCAAACTTTTTGTTTATAGG+TGG + chr1_1:62909848-62909867 Msa0034940:intron 30.0%
!! AACTTTTTGTTTATAGGTGG+TGG + chr1_1:62909851-62909870 Msa0034940:intron 30.0%
AGAGATTTAATATCTGAACC+GGG - chr1_1:62909921-62909940 None:intergenic 30.0%
ATAAATAACAATCGCCAACT+GGG - chr1_1:62909952-62909971 None:intergenic 30.0%
TGTAGAATGAAAACTCTACA+TGG + chr1_1:62910105-62910124 Msa0034940:intron 30.0%
! GCACTATATTTGGTGATATT+TGG + chr1_1:62910138-62910157 Msa0034940:intron 30.0%
CATTGTAATCTTGTTAAGTG+TGG + chr1_1:62910169-62910188 Msa0034940:intron 30.0%
TTGTAATCTTGTTAAGTGTG+GGG + chr1_1:62910171-62910190 Msa0034940:intron 30.0%
! TTTTCATATAATGGTCCACT+CGG + chr1_1:62910316-62910335 Msa0034940:CDS 30.0%
! AAGCTGTATCACTTTATTTG+TGG + chr1_1:62910356-62910375 Msa0034940:CDS 30.0%
! AGCTGTATCACTTTATTTGT+GGG + chr1_1:62910357-62910376 Msa0034940:CDS 30.0%
TGGAAGAAAATATACTTGAG+CGG - chr1_1:62910389-62910408 None:intergenic 30.0%
!!! ATTTTTTGGGTGAAAACAGT+CGG + chr1_1:62910480-62910499 Msa0034940:intron 30.0%
TCAAGAGGAACAATTTCTAT+GGG - chr1_1:62910544-62910563 None:intergenic 30.0%
AATTGCATATAAGGGATTTC+AGG + chr1_1:62910957-62910976 Msa0034940:CDS 30.0%
TTTAGAGAGACTAAGATGTA+AGG - chr1_1:62911422-62911441 None:intergenic 30.0%
!! ATATTTTTGAAGGATTCAGC+AGG + chr1_1:62911562-62911581 Msa0034940:intron 30.0%
CTAAAGAAATTATCAAGTGC+GGG + chr1_1:62911595-62911614 Msa0034940:CDS 30.0%
ATTGAAATGTTGGCAATAGA+TGG - chr1_1:62911633-62911652 None:intergenic 30.0%
! TTGATGATCAAAAAGAGAAC+TGG + chr1_1:62911662-62911681 Msa0034940:CDS 30.0%
TTGAATACCTATGTCTATGT+AGG + chr1_1:62911987-62912006 Msa0034940:intron 30.0%
AGGATGGAACAAATGTTAAA+TGG - chr1_1:62912025-62912044 None:intergenic 30.0%
ATAAAAAGCTGCAAGATAGA+AGG - chr1_1:62912045-62912064 None:intergenic 30.0%
!!! ATATCCATCAAAGTTTTGGA+TGG - chr1_1:62912167-62912186 None:intergenic 30.0%
! AACTTTGATGGATATAACTG+GGG + chr1_1:62912172-62912191 Msa0034940:CDS 30.0%
AGTTTATAATACCACAGTGA+TGG + chr1_1:62912198-62912217 Msa0034940:intron 30.0%
ACAATTCAGACACTGATATA+TGG + chr1_1:62912221-62912240 Msa0034940:intron 30.0%
TCTTACGAAACTCAATTGTA+CGG - chr1_1:62912345-62912364 None:intergenic 30.0%
TACAATTGAGTTTCGTAAGA+TGG + chr1_1:62912345-62912364 Msa0034940:CDS 30.0%
!!! TCTTTTGTTGTTTTGTCTCT+TGG + chr1_1:62912483-62912502 Msa0034940:intron 30.0%
TTGGAATTTATGTACATTGC+AGG + chr1_1:62912502-62912521 Msa0034940:intron 30.0%
TGTATCTTATAGATTGTTCC+AGG + chr1_1:62912757-62912776 Msa0034940:intron 30.0%
!!! ACTTGCTGTTTTTCTGTTAA+TGG + chr1_1:62913014-62913033 Msa0034940:intron 30.0%
TCCAATAAAGATTTCATGAG+CGG - chr1_1:62913097-62913116 None:intergenic 30.0%
TCTTCATTATATGACCCATA+AGG - chr1_1:62913342-62913361 None:intergenic 30.0%
GTATGTAATGTAACTCACTT+TGG + chr1_1:62913370-62913389 Msa0034940:intron 30.0%
!! AATGTTATTTCACTCGGTTA+TGG + chr1_1:62913478-62913497 Msa0034940:intron 30.0%
!! ATGTTATTTCACTCGGTTAT+GGG + chr1_1:62913479-62913498 Msa0034940:intron 30.0%
TTCTTAAATGAATGTGGACA+AGG + chr1_1:62913627-62913646 Msa0034940:intron 30.0%
ATCAAAGAATCAATACAAGC+GGG - chr1_1:62913752-62913771 None:intergenic 30.0%
TGAAATATGATTTCGTGACA+TGG + chr1_1:62913826-62913845 Msa0034940:intron 30.0%
! CCTTTTCTTTTGTTAAACGT+TGG - chr1_1:62913878-62913897 None:intergenic 30.0%
CCAACGTTTAACAAAAGAAA+AGG + chr1_1:62913875-62913894 Msa0034940:CDS 30.0%
CGTTTAACAAAAGAAAAGGA+TGG + chr1_1:62913879-62913898 Msa0034940:CDS 30.0%
TTGAAAAACAGATATGGTGA+AGG + chr1_1:62914052-62914071 Msa0034940:intron 30.0%
AATGATTATTAAGCAGCATG+TGG - chr1_1:62914179-62914198 None:intergenic 30.0%
CATATCAGTTGAACTTACAT+CGG - chr1_1:62914312-62914331 None:intergenic 30.0%
ATCAGAAGTTTAAGTAACGA+TGG - chr1_1:62914364-62914383 None:intergenic 30.0%
!! TTATTGTTGATTTGTCTTGC+TGG + chr1_1:62914412-62914431 Msa0034940:intron 30.0%
ATTATCAAGATGCTTGAGAA+GGG - chr1_1:62914589-62914608 None:intergenic 30.0%
TATTATCAAGATGCTTGAGA+AGG - chr1_1:62914590-62914609 None:intergenic 30.0%
TGGATACAGAAAACATCTAA+GGG - chr1_1:62914703-62914722 None:intergenic 30.0%
ATGGATACAGAAAACATCTA+AGG - chr1_1:62914704-62914723 None:intergenic 30.0%
GTTCATTGTAAAGTGGAAAA+TGG - chr1_1:62914740-62914759 None:intergenic 30.0%
CAATGATGTTCATTGTAAAG+TGG - chr1_1:62914747-62914766 None:intergenic 30.0%
CACTTTACAATGAACATCAT+TGG + chr1_1:62914745-62914764 Msa0034940:intron 30.0%
TCACATTAGAATTCTACTAG+TGG - chr1_1:62914773-62914792 None:intergenic 30.0%
TTTGTTGCCACAAATTAACA+TGG + chr1_1:62914793-62914812 Msa0034940:intron 30.0%
AATTTCATAAAGCCAAAACC+TGG - chr1_1:62914973-62914992 None:intergenic 30.0%
! TGGCAAACTTGATATTTTCA+TGG + chr1_1:62915061-62915080 Msa0034940:intron 30.0%
CTGAAACAGACAAATAAGAA+AGG - chr1_1:62915132-62915151 None:intergenic 30.0%
ATAGTTAGCATTAAGAATGG+GGG + chr1_1:62915189-62915208 Msa0034940:intron 30.0%
TATCACTATTCCGATCAATT+TGG + chr1_1:62915630-62915649 Msa0034940:intron 30.0%
TTTATTCTGCTGAGAATGAA+TGG + chr1_1:62915986-62916005 Msa0034940:intron 30.0%
TTAGAAATGGTTATTTGGGA+GGG - chr1_1:62916150-62916169 None:intergenic 30.0%
ATTAGAAATGGTTATTTGGG+AGG - chr1_1:62916151-62916170 None:intergenic 30.0%
CTAATCCCTGCAAAAAATTT+AGG - chr1_1:62916611-62916630 None:intergenic 30.0%
GCTTATCCTAAATCTGTTAT+TGG + chr1_1:62916632-62916651 Msa0034940:intron 30.0%
TATAGAGTGTGGTGAAATAT+GGG - chr1_1:62916662-62916681 None:intergenic 30.0%
ATATAGAGTGTGGTGAAATA+TGG - chr1_1:62916663-62916682 None:intergenic 30.0%
AATACTTCCATAGACAAATC+TGG - chr1_1:62916743-62916762 None:intergenic 30.0%
!! TTTGTCTATGGAAGTATTGA+CGG + chr1_1:62916745-62916764 Msa0034940:intron 30.0%
TATGACAAAGTTGTAAGTAC+AGG + chr1_1:62916841-62916860 Msa0034940:CDS 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr1_1:62917166-62917185 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr1_1:62917172-62917191 None:intergenic 30.0%
!!! TTTTTTAGTTCCCCCAAATT+AGG + chr1_1:62917178-62917197 Msa0034940:intron 30.0%
!!! TTTTTAGTTCCCCCAAATTA+GGG + chr1_1:62917179-62917198 Msa0034940:intron 30.0%
ATACAAAATCCCCCTAATTT+GGG - chr1_1:62917193-62917212 None:intergenic 30.0%
AATACAAAATCCCCCTAATT+TGG - chr1_1:62917194-62917213 None:intergenic 30.0%
GAAGGAATAAATGGAAAGAA+TGG - chr1_1:62917260-62917279 None:intergenic 30.0%
! TTTTCTTTTAGGCTCTGTTT+GGG - chr1_1:62917322-62917341 None:intergenic 30.0%
! ATTTTCTTTTAGGCTCTGTT+TGG - chr1_1:62917323-62917342 None:intergenic 30.0%
AAATTTACAGCTAGGAAGTT+TGG + chr1_1:62917339-62917358 Msa0034940:intron 30.0%
AATACACTTACAGTCTCTAT+GGG - chr1_1:62917644-62917663 None:intergenic 30.0%
ATTATAGAAGTGGAAAAGTG+GGG - chr1_1:62917685-62917704 None:intergenic 30.0%
GAATTATAGAAGTGGAAAAG+TGG - chr1_1:62917687-62917706 None:intergenic 30.0%
!!! GAACATCTTTTTCAACAATG+TGG + chr1_1:62917751-62917770 Msa0034940:intron 30.0%
!!! TTTATTTTTTTCTGGGTCTC+TGG + chr1_1:62917931-62917950 Msa0034940:intron 30.0%
AAGTGTTATAGCATTATCAC+AGG + chr1_1:62918040-62918059 Msa0034940:CDS 30.0%
CATTATCACAGGTAAAATGT+TGG + chr1_1:62918051-62918070 Msa0034940:intron 30.0%
TTATACTGATCTTATGTTGG+AGG + chr1_1:62918108-62918127 Msa0034940:intron 30.0%
TAAGTGCAACAAATAGGATA+GGG + chr1_1:62918137-62918156 Msa0034940:intron 30.0%
TTCTTATAGCGAGACTATTA+TGG + chr1_1:62918268-62918287 Msa0034940:intron 30.0%
!! GATACAGATGATACTAGTTT+TGG - chr1_1:62918470-62918489 None:intergenic 30.0%
GCGAGATTAAAAGAAAAGTT+AGG - chr1_1:62918574-62918593 None:intergenic 30.0%
! TCTTTTAATCTCGCAATTTC+AGG + chr1_1:62918580-62918599 Msa0034940:intron 30.0%
ACATACAATTCCAATAACTG+GGG + chr1_1:62918612-62918631 Msa0034940:CDS 30.0%
!! TGTTTTTCATTTTTCTCCTG+TGG - chr1_1:62918651-62918670 None:intergenic 30.0%
AGGAGAAAAATGAAAAACAC+TGG + chr1_1:62918652-62918671 Msa0034940:CDS 30.0%
TTCATAAAATATGCCACACT+AGG + chr1_1:62918861-62918880 Msa0034940:intron 30.0%
GTAAACAAATGCAATAGAAG+TGG - chr1_1:62918977-62918996 None:intergenic 30.0%
ATGATTATGATCATCACCAT+TGG + chr1_1:62919347-62919366 Msa0034940:intron 30.0%
ATAACAATGACAATTGCCAA+TGG - chr1_1:62919366-62919385 None:intergenic 30.0%
!! GTTTTGTTGACAATTGTGTT+GGG + chr1_1:62919606-62919625 Msa0034940:intron 30.0%
TTGAAGATTTCTTGATTGCA+GGG - chr1_1:62919697-62919716 None:intergenic 30.0%
ATTGAAGATTTCTTGATTGC+AGG - chr1_1:62919698-62919717 None:intergenic 30.0%
CAATCACTTTCATCTTCAAT+TGG + chr1_1:62919735-62919754 Msa0034940:intron 30.0%
! CATTCACTTTACATTTTCCT+TGG - chr1_1:62919922-62919941 None:intergenic 30.0%
!! TGAATGTGAATGCTTTGTTT+CGG + chr1_1:62919936-62919955 Msa0034940:three_prime_UTR 30.0%
!! AGTGATTATGATGCTAGTTT+TGG + chr1_1:62919996-62920015 Msa0034940:three_prime_UTR 30.0%
!!! CATGTCAAAAAAGTGTTTTG+AGG - chr1_1:62920060-62920079 None:intergenic 30.0%
GAAGGGAAAGAAAGTGAAAA+TGG - chr1_1:62908226-62908245 None:intergenic 35.0%
GATTGAGGTTGGAAATTGAA+GGG - chr1_1:62908243-62908262 None:intergenic 35.0%
AGATTGAGGTTGGAAATTGA+AGG - chr1_1:62908244-62908263 None:intergenic 35.0%
AAGTAGTAGATGAAGAAGGA+AGG - chr1_1:62908297-62908316 None:intergenic 35.0%
TGGAAAGTAGTAGATGAAGA+AGG - chr1_1:62908301-62908320 None:intergenic 35.0%
TTCAACAGAGGAAGAAGAAA+GGG - chr1_1:62908374-62908393 None:intergenic 35.0%
ATAAACCTGAGAAATGGAAG+TGG - chr1_1:62908401-62908420 None:intergenic 35.0%
TCACTCAATCTCTTATTGCT+TGG + chr1_1:62908594-62908613 Msa0034940:CDS 35.0%
!! ATTCAAAGAAGCATCTTTGC+TGG - chr1_1:62908660-62908679 None:intergenic 35.0%
GGTTGCATTTAGTGTATGTT+TGG + chr1_1:62908792-62908811 Msa0034940:intron 35.0%
!! GAAAATGGAAGTGGATTAAG+AGG - chr1_1:62909105-62909124 None:intergenic 35.0%
GAATCACTAACAGAGACAAA+TGG - chr1_1:62909146-62909165 None:intergenic 35.0%
CTATTTGTAATTGATAGGCG+AGG + chr1_1:62909255-62909274 Msa0034940:intron 35.0%
!! AAGCAATCAGAGGTATTTAG+CGG - chr1_1:62909383-62909402 None:intergenic 35.0%
CTATTCCTAAAAGCAATCAG+AGG - chr1_1:62909393-62909412 None:intergenic 35.0%
GTCCCTAAAATATATTCCCA+TGG + chr1_1:62909484-62909503 Msa0034940:intron 35.0%
CAACTATTAGGGGTTATATG+AGG - chr1_1:62909517-62909536 None:intergenic 35.0%
CTCATATAACCCCTAATAGT+TGG + chr1_1:62909515-62909534 Msa0034940:intron 35.0%
ATACCTTTCCCAACTATTAG+GGG - chr1_1:62909527-62909546 None:intergenic 35.0%
CATACCTTTCCCAACTATTA+GGG - chr1_1:62909528-62909547 None:intergenic 35.0%
TCATACCTTTCCCAACTATT+AGG - chr1_1:62909529-62909548 None:intergenic 35.0%
! CAGATTTCACCCTGTAATTT+TGG + chr1_1:62909576-62909595 Msa0034940:intron 35.0%
CTCAAATAGCTCCAGTAATT+TGG - chr1_1:62909648-62909667 None:intergenic 35.0%
CAAATTACTGGAGCTATTTG+AGG + chr1_1:62909646-62909665 Msa0034940:intron 35.0%
! CAAATTGATGGATCAGAATC+AGG - chr1_1:62909678-62909697 None:intergenic 35.0%
CTGATTCTGATCCATCAATT+TGG + chr1_1:62909676-62909695 Msa0034940:intron 35.0%
! TCTTCTTTTTGACAATGTGG+TGG + chr1_1:62909795-62909814 Msa0034940:intron 35.0%
ATCTCTTCTTAAATCCCAGT+TGG + chr1_1:62909935-62909954 Msa0034940:CDS 35.0%
CATAAATAACAATCGCCAAC+TGG - chr1_1:62909953-62909972 None:intergenic 35.0%
CATGTGCTTTGCACTATATT+TGG + chr1_1:62910128-62910147 Msa0034940:intron 35.0%
! AAAAGCTCATCTAAAACACC+AGG - chr1_1:62910298-62910317 None:intergenic 35.0%
AGAAAATATACTTGAGCGGT+AGG - chr1_1:62910385-62910404 None:intergenic 35.0%
CTCAAGAGGAACAATTTCTA+TGG - chr1_1:62910545-62910564 None:intergenic 35.0%
CATAGAAATTGTTCCTCTTG+AGG + chr1_1:62910543-62910562 Msa0034940:CDS 35.0%
AACTAAAGGGCCAAAAAGTT+GGG + chr1_1:62910585-62910604 Msa0034940:CDS 35.0%
CTAATGATCCATATGCTAGA+GGG + chr1_1:62910677-62910696 Msa0034940:CDS 35.0%
TTAAGCAGACTTTCATCAGA+TGG + chr1_1:62910821-62910840 Msa0034940:intron 35.0%
!! GGCATACACATGTTTTTCAA+AGG - chr1_1:62911025-62911044 None:intergenic 35.0%
!!! TGTCTGATTTTTAGTTCTCC+TGG + chr1_1:62911117-62911136 Msa0034940:intron 35.0%
TAAAGATATCTGGAGAAACC+AGG - chr1_1:62911138-62911157 None:intergenic 35.0%
TGGTTTCTCCAGATATCTTT+AGG + chr1_1:62911137-62911156 Msa0034940:intron 35.0%
!! CACTTAATAGCTTTAGAGCA+AGG - chr1_1:62911280-62911299 None:intergenic 35.0%
ACTGTATGGCAATAAGCAAA+AGG - chr1_1:62911334-62911353 None:intergenic 35.0%
TTATCTTGCCTTCACTTTGA+CGG + chr1_1:62911392-62911411 Msa0034940:CDS 35.0%
TTGCCAACATTTCAATTTGC+TGG + chr1_1:62911637-62911656 Msa0034940:CDS 35.0%
! TGCCAACATTTCAATTTGCT+GGG + chr1_1:62911638-62911657 Msa0034940:CDS 35.0%
AAAGAGAACTGGAGAAATGT+TGG + chr1_1:62911673-62911692 Msa0034940:CDS 35.0%
!!! GCGAAAAAGGTTTTATTGAG+TGG - chr1_1:62911719-62911738 None:intergenic 35.0%
AGGGAGTTTAATTGCGAAAA+AGG - chr1_1:62911732-62911751 None:intergenic 35.0%
CTTGAAAGATGTTTGAAGGA+GGG - chr1_1:62911751-62911770 None:intergenic 35.0%
GTTCCTTGAAAGATGTTTGA+AGG - chr1_1:62911755-62911774 None:intergenic 35.0%
AGAAATGCCTACATAGACAT+AGG - chr1_1:62911997-62912016 None:intergenic 35.0%
TGTCTATGTAGGCATTTCTA+AGG + chr1_1:62911998-62912017 Msa0034940:intron 35.0%
! ACTTTGATGGATATAACTGG+GGG + chr1_1:62912173-62912192 Msa0034940:CDS 35.0%
AGCTATGCAAGTAATCCAAA+TGG + chr1_1:62912313-62912332 Msa0034940:CDS 35.0%
GTAATGCCATTGTCTATTGT+TGG + chr1_1:62912450-62912469 Msa0034940:intron 35.0%
TACTGTCTACAATCATTTGC+AGG + chr1_1:62912559-62912578 Msa0034940:CDS 35.0%
ACTGTCTACAATCATTTGCA+GGG + chr1_1:62912560-62912579 Msa0034940:CDS 35.0%
TACAATCATTTGCAGGGAAA+TGG + chr1_1:62912566-62912585 Msa0034940:CDS 35.0%
ACAATCATTTGCAGGGAAAT+GGG + chr1_1:62912567-62912586 Msa0034940:CDS 35.0%
AGGACAGAATGTTCATCAAA+GGG - chr1_1:62912593-62912612 None:intergenic 35.0%
AAGGACAGAATGTTCATCAA+AGG - chr1_1:62912594-62912613 None:intergenic 35.0%
TGAACATTCTGTCCTTGATA+AGG + chr1_1:62912598-62912617 Msa0034940:CDS 35.0%
GATAATTCCTGACCTTATCA+AGG - chr1_1:62912613-62912632 None:intergenic 35.0%
TTCCAGGTTACTATCTAAGA+AGG + chr1_1:62912773-62912792 Msa0034940:CDS 35.0%
TTCCTTCTTAGATAGTAACC+TGG - chr1_1:62912778-62912797 None:intergenic 35.0%
TATCTAAGAAGGAACACAGA+TGG + chr1_1:62912784-62912803 Msa0034940:CDS 35.0%
CCAATAAAGATTTCATGAGC+GGG - chr1_1:62913096-62913115 None:intergenic 35.0%
! GGGAAAGTATAATTAAGGTG+AGG - chr1_1:62913219-62913238 None:intergenic 35.0%
AAAAGAACTTCAGCAGTTTC+TGG + chr1_1:62913510-62913529 Msa0034940:intron 35.0%
ACCCATAATCCAAAATCAGA+GGG - chr1_1:62913536-62913555 None:intergenic 35.0%
AACCCATAATCCAAAATCAG+AGG - chr1_1:62913537-62913556 None:intergenic 35.0%
AATGCATGACAAGGCTAATA+TGG + chr1_1:62913664-62913683 Msa0034940:intron 35.0%
! TAATATGGTTGGTCATAACC+TGG + chr1_1:62913679-62913698 Msa0034940:intron 35.0%
GTCAAAATAAAGCTGAGAAC+TGG - chr1_1:62913726-62913745 None:intergenic 35.0%
AAAGAAAAGGATGGAGTTGA+TGG + chr1_1:62913888-62913907 Msa0034940:CDS 35.0%
AGACAACATGTGAATGAAGA+GGG - chr1_1:62913997-62914016 None:intergenic 35.0%
AAGACAACATGTGAATGAAG+AGG - chr1_1:62913998-62914017 None:intergenic 35.0%
AAAACAGATATGGTGAAGGA+TGG + chr1_1:62914056-62914075 Msa0034940:intron 35.0%
AAACAGATATGGTGAAGGAT+GGG + chr1_1:62914057-62914076 Msa0034940:intron 35.0%
TTTGGTGAAGTTGCCAAAAA+TGG + chr1_1:62914082-62914101 Msa0034940:CDS 35.0%
TTGGTGAAGTTGCCAAAAAT+GGG + chr1_1:62914083-62914102 Msa0034940:CDS 35.0%
AATCTTGCTGGAACACAAAT+TGG + chr1_1:62914130-62914149 Msa0034940:CDS 35.0%
ATCTTGCTGGAACACAAATT+GGG + chr1_1:62914131-62914150 Msa0034940:CDS 35.0%
CATGTACAAGATAGAACTTC+TGG + chr1_1:62914219-62914238 Msa0034940:intron 35.0%
CGATGTAAGTTCAACTGATA+TGG + chr1_1:62914310-62914329 Msa0034940:intron 35.0%
AATAATTATCAGTAGGCCAC+AGG - chr1_1:62914654-62914673 None:intergenic 35.0%
GGATACAGAAAACATCTAAG+GGG - chr1_1:62914702-62914721 None:intergenic 35.0%
AAATGGGCATCTAATAGGAA+TGG - chr1_1:62914723-62914742 None:intergenic 35.0%
ATTGCATGCAAGCACTAAAA+GGG - chr1_1:62914837-62914856 None:intergenic 35.0%
AATTGCATGCAAGCACTAAA+AGG - chr1_1:62914838-62914857 None:intergenic 35.0%
AAAATATCAAGTTTGCCAGC+AGG - chr1_1:62915059-62915078 None:intergenic 35.0%
GTCTGTTTCAGCATTTGAAT+AGG + chr1_1:62915141-62915160 Msa0034940:intron 35.0%
! TTCTCTGTGCAAAATTTTGG+AGG + chr1_1:62915226-62915245 Msa0034940:intron 35.0%
! TCTCTGTGCAAAATTTTGGA+GGG + chr1_1:62915227-62915246 Msa0034940:intron 35.0%
TACCAAGTATCCATCTTAAG+GGG - chr1_1:62915379-62915398 None:intergenic 35.0%
CTACCAAGTATCCATCTTAA+GGG - chr1_1:62915380-62915399 None:intergenic 35.0%
TTGATCGGAATAGTGATAAC+AGG - chr1_1:62915628-62915647 None:intergenic 35.0%
GTTTATTAGATTGGAATGGC+TGG + chr1_1:62915681-62915700 Msa0034940:intron 35.0%
ATTCCAATAGACATAGCAAG+TGG - chr1_1:62915764-62915783 None:intergenic 35.0%
! GGAGAGAACCAAAATTTTCT+TGG - chr1_1:62916099-62916118 None:intergenic 35.0%
AAACTCAAGATTCATGAGTC+AGG - chr1_1:62916411-62916430 None:intergenic 35.0%
CATGAATCTTGAGTTTGTAG+TGG + chr1_1:62916415-62916434 Msa0034940:intron 35.0%
! AATCTTGAGTTTGTAGTGGA+GGG + chr1_1:62916419-62916438 Msa0034940:intron 35.0%
TCTCACCTCGAATATAGATA+TGG + chr1_1:62916503-62916522 Msa0034940:intron 35.0%
TTTGGCCATATCTATATTCG+AGG - chr1_1:62916511-62916530 None:intergenic 35.0%
TTAGGAATCGACGATTACTT+TGG - chr1_1:62916529-62916548 None:intergenic 35.0%
!! GTAATCGTCGATTCCTAATA+AGG + chr1_1:62916531-62916550 Msa0034940:intron 35.0%
CAATGGCAGTAGTAGATAAA+TGG + chr1_1:62916806-62916825 Msa0034940:CDS 35.0%
! GTTCTTGAAGTATCAAACTG+AGG + chr1_1:62916899-62916918 Msa0034940:intron 35.0%
!!! TTTTAGTTCCCCCAAATTAG+GGG + chr1_1:62917180-62917199 Msa0034940:intron 35.0%
TACAAAATCCCCCTAATTTG+GGG - chr1_1:62917192-62917211 None:intergenic 35.0%
! ATTTTATCAGGTGAAAGGGT+CGG + chr1_1:62917574-62917593 Msa0034940:intron 35.0%
!! TCGGAAGTATTAACATATGG+TGG + chr1_1:62917593-62917612 Msa0034940:CDS 35.0%
!! CGGAAGTATTAACATATGGT+GGG + chr1_1:62917594-62917613 Msa0034940:CDS 35.0%
ATACACTTACAGTCTCTATG+GGG - chr1_1:62917643-62917662 None:intergenic 35.0%
GAATACACTTACAGTCTCTA+TGG - chr1_1:62917645-62917664 None:intergenic 35.0%
TAAGCTCACAATGTCAAAGA+GGG - chr1_1:62917860-62917879 None:intergenic 35.0%
TTAAGCTCACAATGTCAAAG+AGG - chr1_1:62917861-62917880 None:intergenic 35.0%
CTTTGACATTGTGAGCTTAA+AGG + chr1_1:62917861-62917880 Msa0034940:CDS 35.0%
! CTATAACACTTGTTGCCAAA+TGG - chr1_1:62918031-62918050 None:intergenic 35.0%
CTTCAGTAAGTGCAACAAAT+AGG + chr1_1:62918131-62918150 Msa0034940:intron 35.0%
GTAAGTGCAACAAATAGGAT+AGG + chr1_1:62918136-62918155 Msa0034940:intron 35.0%
TCATCACCAGAGTGAAAAAA+TGG - chr1_1:62918323-62918342 None:intergenic 35.0%
!! GTTTTGGCAAATTTGATGCA+GGG - chr1_1:62918454-62918473 None:intergenic 35.0%
!! AGTTTTGGCAAATTTGATGC+AGG - chr1_1:62918455-62918474 None:intergenic 35.0%
!! TTTTCATTTTTCTCCTGTGG+AGG - chr1_1:62918648-62918667 None:intergenic 35.0%
CATTATCACCATTTAGTGAG+TGG + chr1_1:62918698-62918717 Msa0034940:intron 35.0%
TTTGAAGACCACTCACTAAA+TGG - chr1_1:62918709-62918728 None:intergenic 35.0%
TCTTCAAATGCATGCCTTAA+CGG + chr1_1:62918721-62918740 Msa0034940:intron 35.0%
TAATTTCTAAGCGCACTTGT+TGG + chr1_1:62918832-62918851 Msa0034940:intron 35.0%
GTTGTTGCAGTTGTGATTTA+AGG + chr1_1:62918932-62918951 Msa0034940:intron 35.0%
TTTCAGAATGAAACCAAGAC+TGG + chr1_1:62919026-62919045 Msa0034940:intron 35.0%
AGAAATTGTCCATTGTAGCT+AGG - chr1_1:62919086-62919105 None:intergenic 35.0%
TCTTAAACCTGTTGCGTATA+AGG + chr1_1:62919103-62919122 Msa0034940:CDS 35.0%
AAGAATACCTTATACGCAAC+AGG - chr1_1:62919113-62919132 None:intergenic 35.0%
!! ATAGTGATGAGCATTGAAGA+TGG + chr1_1:62919491-62919510 Msa0034940:CDS 35.0%
TTTATGACTAGGACATGCTT+TGG + chr1_1:62919584-62919603 Msa0034940:intron 35.0%
!!! GGTTTTGTTGACAATTGTGT+TGG + chr1_1:62919605-62919624 Msa0034940:intron 35.0%
TGAAAGTGATTGTACCTGAA+CGG - chr1_1:62919727-62919746 None:intergenic 35.0%
TCAAAATATGAGGCTTCTTC+TGG + chr1_1:62919853-62919872 Msa0034940:CDS 35.0%
!! GAATGTGAATGCTTTGTTTC+GGG + chr1_1:62919937-62919956 Msa0034940:three_prime_UTR 35.0%
TGATGGAAGAAGATTGAGGT+TGG - chr1_1:62908254-62908273 None:intergenic 40.0%
! GGAATGATGGAAGAAGATTG+AGG - chr1_1:62908258-62908277 None:intergenic 40.0%
AAGAAGAAGAAAGAGGTGGT+GGG - chr1_1:62908348-62908367 None:intergenic 40.0%
GAAGAAGAAGAAGAAAGAGG+TGG - chr1_1:62908352-62908371 None:intergenic 40.0%
AGGGAAGAAGAAGAAGAAAG+AGG - chr1_1:62908355-62908374 None:intergenic 40.0%
GTTCAACAGAGGAAGAAGAA+AGG - chr1_1:62908375-62908394 None:intergenic 40.0%
ACAAACCACTTCCATTTCTC+AGG + chr1_1:62908393-62908412 Msa0034940:CDS 40.0%
AATTATGATTGCCCAGATGC+AGG + chr1_1:62908538-62908557 Msa0034940:intron 40.0%
AAGCATCTTTGCTGGAAAGT+AGG - chr1_1:62908652-62908671 None:intergenic 40.0%
CCGCTTTCAATCCAAAGTAT+CGG - chr1_1:62908763-62908782 None:intergenic 40.0%
CCGATACTTTGGATTGAAAG+CGG + chr1_1:62908760-62908779 Msa0034940:intron 40.0%
CGATACTTTGGATTGAAAGC+GGG + chr1_1:62908761-62908780 Msa0034940:intron 40.0%
!!! GAAGTGGATTAAGAGGGTTT+TGG - chr1_1:62909098-62909117 None:intergenic 40.0%
GGTGTATTACATTTGCAGGA+AGG - chr1_1:62909315-62909334 None:intergenic 40.0%
TAACCCCTAATAGTTGGGAA+AGG + chr1_1:62909521-62909540 Msa0034940:intron 40.0%
CTGAAAATAGCCCCTGTAAA+GGG - chr1_1:62909618-62909637 None:intergenic 40.0%
TCTGAAAATAGCCCCTGTAA+AGG - chr1_1:62909619-62909638 None:intergenic 40.0%
GAGAAATTTCCACACATTCG+AGG + chr1_1:62909873-62909892 Msa0034940:CDS 40.0%
AAAGCTTTCAATATGCCTCC+CGG + chr1_1:62909900-62909919 Msa0034940:CDS 40.0%
GATTTAATATCTGAACCGGG+AGG - chr1_1:62909918-62909937 None:intergenic 40.0%
! TATGTGCTATTGAAGACAGC+CGG - chr1_1:62909986-62910005 None:intergenic 40.0%
!! TAAGGTTGAAGAGTGTCCAT+AGG - chr1_1:62910430-62910449 None:intergenic 40.0%
TACATCTATAAGCACCCATC+AGG + chr1_1:62910511-62910530 Msa0034940:CDS 40.0%
AGAAATTGTTCCTCTTGAGG+AGG + chr1_1:62910546-62910565 Msa0034940:CDS 40.0%
ACGGTGTTTGGAGAACTAAA+GGG + chr1_1:62910572-62910591 Msa0034940:CDS 40.0%
GAACTAAAGGGCCAAAAAGT+TGG + chr1_1:62910584-62910603 Msa0034940:CDS 40.0%
! TAACAACCCTCCCAACTTTT+TGG - chr1_1:62910598-62910617 None:intergenic 40.0%
GCTAATGATCCATATGCTAG+AGG + chr1_1:62910676-62910695 Msa0034940:CDS 40.0%
TAAGCATACCCTCTAGCATA+TGG - chr1_1:62910688-62910707 None:intergenic 40.0%
TCCATCAGGTTTCAACTCAT+CGG - chr1_1:62910876-62910895 None:intergenic 40.0%
! ATGAGTTGAAACCTGATGGA+TGG + chr1_1:62910876-62910895 Msa0034940:CDS 40.0%
! TGAGTTGAAACCTGATGGAT+GGG + chr1_1:62910877-62910896 Msa0034940:CDS 40.0%
AAGGATTACCGTCAAAGTGA+AGG - chr1_1:62911403-62911422 None:intergenic 40.0%
TGTTGGCAATAGATGGACAT+GGG - chr1_1:62911626-62911645 None:intergenic 40.0%
ATGTTGGCAATAGATGGACA+TGG - chr1_1:62911627-62911646 None:intergenic 40.0%
!! GCCAACATTTCAATTTGCTG+GGG + chr1_1:62911639-62911658 Msa0034940:CDS 40.0%
ACCCCAGCAAATTGAAATGT+TGG - chr1_1:62911643-62911662 None:intergenic 40.0%
CCTTGAAAGATGTTTGAAGG+AGG - chr1_1:62911752-62911771 None:intergenic 40.0%
CCTCCTTCAAACATCTTTCA+AGG + chr1_1:62911749-62911768 Msa0034940:intron 40.0%
AAAGCTGCAAGATAGAAGGA+TGG - chr1_1:62912041-62912060 None:intergenic 40.0%
CACCATTCTGATAGATACGT+CGG + chr1_1:62912090-62912109 Msa0034940:intron 40.0%
TACCGACGTATCTATCAGAA+TGG - chr1_1:62912095-62912114 None:intergenic 40.0%
ACAGCCATCCAAAACTTTGA+TGG + chr1_1:62912160-62912179 Msa0034940:CDS 40.0%
! AAAGGTACAACCCTGTTCTT+TGG + chr1_1:62912275-62912294 Msa0034940:intron 40.0%
AAGGTACAACCCTGTTCTTT+GGG + chr1_1:62912276-62912295 Msa0034940:intron 40.0%
TACTTGCATAGCTGCCTTTA+GGG - chr1_1:62912306-62912325 None:intergenic 40.0%
TTACTTGCATAGCTGCCTTT+AGG - chr1_1:62912307-62912326 None:intergenic 40.0%
! ATTGTACGGTTTGGACCATT+TGG - chr1_1:62912331-62912350 None:intergenic 40.0%
CGAAACTCAATTGTACGGTT+TGG - chr1_1:62912340-62912359 None:intergenic 40.0%
TGAGTTTCGTAAGATGGTTC+AGG + chr1_1:62912351-62912370 Msa0034940:CDS 40.0%
CAGTATCCAACACAACATGA+AGG - chr1_1:62912544-62912563 None:intergenic 40.0%
ATTCTGTCCTTGATAAGGTC+AGG + chr1_1:62912603-62912622 Msa0034940:intron 40.0%
! TGTTAGCCTATCTACTTCTG+TGG + chr1_1:62912725-62912744 Msa0034940:intron 40.0%
TTCACACCACAGAAGTAGAT+AGG - chr1_1:62912734-62912753 None:intergenic 40.0%
ACACTGGGCAGTCAATTATA+AGG + chr1_1:62912888-62912907 Msa0034940:CDS 40.0%
AACAACAACAACAACCACCA+CGG - chr1_1:62912936-62912955 None:intergenic 40.0%
CCCGCTCATGAAATCTTTAT+TGG + chr1_1:62913093-62913112 Msa0034940:intron 40.0%
TGGGTTCAGATTTGACCTTA+TGG + chr1_1:62913324-62913343 Msa0034940:CDS 40.0%
GGGTTCAGATTTGACCTTAT+GGG + chr1_1:62913325-62913344 Msa0034940:CDS 40.0%
! GCCCTCTGATTTTGGATTAT+GGG + chr1_1:62913532-62913551 Msa0034940:intron 40.0%
CATGACAAGGCTAATATGGT+TGG + chr1_1:62913668-62913687 Msa0034940:intron 40.0%
!! CTGAGAACTGGTGTTGTATA+TGG - chr1_1:62913714-62913733 None:intergenic 40.0%
GATTATTAAGCAGCATGTGG+TGG - chr1_1:62914176-62914195 None:intergenic 40.0%
TCACAAAACCCTGTTGAAGA+GGG - chr1_1:62914503-62914522 None:intergenic 40.0%
!! AAGACTAGTTTGCAATCCTG+TGG + chr1_1:62914635-62914654 Msa0034940:intron 40.0%
GTGGAAAATGGGCATCTAAT+AGG - chr1_1:62914728-62914747 None:intergenic 40.0%
!! ATCCTATTTCTGCAGCCTAA+TGG + chr1_1:62914887-62914906 Msa0034940:intron 40.0%
GTTCCATGATCATAGCCATT+AGG - chr1_1:62914905-62914924 None:intergenic 40.0%
ATCCATGCTTTCTGCATCAA+TGG + chr1_1:62914940-62914959 Msa0034940:CDS 40.0%
ATCCATTGATGCAGAAAGCA+TGG - chr1_1:62914945-62914964 None:intergenic 40.0%
! AATGGATCACATCCAGGTTT+TGG + chr1_1:62914958-62914977 Msa0034940:intron 40.0%
CTTACAAACTCCCCTTAAGA+TGG + chr1_1:62915366-62915385 Msa0034940:intron 40.0%
GCTACCAAGTATCCATCTTA+AGG - chr1_1:62915381-62915400 None:intergenic 40.0%
CGATCTGCATATGCATTTGA+CGG + chr1_1:62915441-62915460 Msa0034940:intron 40.0%
GATCTGCATATGCATTTGAC+GGG + chr1_1:62915442-62915461 Msa0034940:intron 40.0%
! ATTTGACGGGACACAACTTT+TGG + chr1_1:62915455-62915474 Msa0034940:intron 40.0%
GCACACTAACTAAGAGAGAA+GGG - chr1_1:62915528-62915547 None:intergenic 40.0%
AGCACACTAACTAAGAGAGA+AGG - chr1_1:62915529-62915548 None:intergenic 40.0%
CTCTTAGTTAGTGTGCTTTG+TGG + chr1_1:62915532-62915551 Msa0034940:intron 40.0%
TTTGTACTAACCAACTCCCA+AGG + chr1_1:62915717-62915736 Msa0034940:CDS 40.0%
TGTCAATACCTCTTGTCCTT+GGG - chr1_1:62915736-62915755 None:intergenic 40.0%
ATGTCAATACCTCTTGTCCT+TGG - chr1_1:62915737-62915756 None:intergenic 40.0%
!! AGGACAAGAGGTATTGACAT+TGG + chr1_1:62915737-62915756 Msa0034940:intron 40.0%
TGCTGAGAATGAATGGTTGT+TGG + chr1_1:62915993-62916012 Msa0034940:intron 40.0%
GCTGAGAATGAATGGTTGTT+GGG + chr1_1:62915994-62916013 Msa0034940:intron 40.0%
CTGAGAATGAATGGTTGTTG+GGG + chr1_1:62915995-62916014 Msa0034940:intron 40.0%
GTGAATAAAAGGGAAACCAC+AGG - chr1_1:62916196-62916215 None:intergenic 40.0%
! TCACAGTTGCTTTCGAATTG+TGG + chr1_1:62916360-62916379 Msa0034940:intron 40.0%
! CACAGTTGCTTTCGAATTGT+GGG + chr1_1:62916361-62916380 Msa0034940:intron 40.0%
GAATCTTGAGTTTGTAGTGG+AGG + chr1_1:62916418-62916437 Msa0034940:intron 40.0%
TGGCAAGTGATGACAATGTT+AGG + chr1_1:62916457-62916476 Msa0034940:intron 40.0%
!! AGGATTGTCCAAGCCTTATT+AGG - chr1_1:62916547-62916566 None:intergenic 40.0%
TAAAGCTAGCTCAAGAGATG+AGG - chr1_1:62916567-62916586 None:intergenic 40.0%
GGTGGTCCAATAACAGATTT+AGG - chr1_1:62916641-62916660 None:intergenic 40.0%
AGGACTGAACATATAGAGTG+TGG - chr1_1:62916673-62916692 None:intergenic 40.0%
GCAGTAGTAGATAAATGGAG+AGG + chr1_1:62916811-62916830 Msa0034940:CDS 40.0%
GTAGTAGATAAATGGAGAGG+TGG + chr1_1:62916814-62916833 Msa0034940:CDS 40.0%
GACAAAGTTGTAAGTACAGG+TGG + chr1_1:62916844-62916863 Msa0034940:CDS 40.0%
! CTTGAAGTATCAAACTGAGG+TGG + chr1_1:62916902-62916921 Msa0034940:intron 40.0%
CGACTAGAATCAGAACTCTT+AGG + chr1_1:62916964-62916983 Msa0034940:intron 40.0%
AACTCTTAGGCTCTGTTTGT+GGG + chr1_1:62916977-62916996 Msa0034940:intron 40.0%
TATTGGAGGAGGAGTTTGAA+GGG - chr1_1:62917155-62917174 None:intergenic 40.0%
! TTTAGTTCCCCCAAATTAGG+GGG + chr1_1:62917181-62917200 Msa0034940:intron 40.0%
ACAAAATCCCCCTAATTTGG+GGG - chr1_1:62917191-62917210 None:intergenic 40.0%
TGGAAAGAATGGAGAGCTAT+GGG - chr1_1:62917249-62917268 None:intergenic 40.0%
ATGGAAAGAATGGAGAGCTA+TGG - chr1_1:62917250-62917269 None:intergenic 40.0%
GAGGGCTTGTAAAAAAAGGA+AGG - chr1_1:62917278-62917297 None:intergenic 40.0%
AAGGGAGGGCTTGTAAAAAA+AGG - chr1_1:62917282-62917301 None:intergenic 40.0%
TACATGCTCTATGGAGATCA+TGG + chr1_1:62917385-62917404 Msa0034940:intron 40.0%
!! GGGTCGGAAGTATTAACATA+TGG + chr1_1:62917590-62917609 Msa0034940:CDS 40.0%
GTATTCCATAGTATATCCCC+TGG + chr1_1:62917659-62917678 Msa0034940:intron 40.0%
TATTCACTTTCAGACTCCGA+CGG + chr1_1:62917974-62917993 Msa0034940:intron 40.0%
GAGATGCAGGATAAACCATT+TGG + chr1_1:62918013-62918032 Msa0034940:CDS 40.0%
TGCAACAAATAGGATAGGGT+AGG + chr1_1:62918141-62918160 Msa0034940:intron 40.0%
!!! GGCATACCATTTTTTCACTC+TGG + chr1_1:62918314-62918333 Msa0034940:CDS 40.0%
GATCGAGATTCATACAACTC+CGG + chr1_1:62918365-62918384 Msa0034940:CDS 40.0%
ATCGAGATTCATACAACTCC+GGG + chr1_1:62918366-62918385 Msa0034940:CDS 40.0%
AATTCCAATAACTGGGGTGT+TGG + chr1_1:62918618-62918637 Msa0034940:CDS 40.0%
TTCGTTAATCTGCACCGTTA+AGG - chr1_1:62918738-62918757 None:intergenic 40.0%
CAATGTAATGCTGGGTAAGT+CGG - chr1_1:62918890-62918909 None:intergenic 40.0%
GATTGACATCCTAGCTACAA+TGG + chr1_1:62919074-62919093 Msa0034940:CDS 40.0%
! AGCATTGAAGATGGTCATGA+TGG + chr1_1:62919500-62919519 Msa0034940:CDS 40.0%
GATTTCTTGATTGCAGGGAA+GGG - chr1_1:62919692-62919711 None:intergenic 40.0%
AGATTTCTTGATTGCAGGGA+AGG - chr1_1:62919693-62919712 None:intergenic 40.0%
GAAAGTGATTGTACCTGAAC+GGG - chr1_1:62919726-62919745 None:intergenic 40.0%
! AAATGAGGCGTTTGATTCCA+TGG + chr1_1:62919783-62919802 Msa0034940:intron 40.0%
!! GTTGTTTTGTTGTGTCTCGA+AGG + chr1_1:62919875-62919894 Msa0034940:CDS 40.0%
!!! GATGCTAGTTTTGGTTCATC+AGG + chr1_1:62920005-62920024 Msa0034940:three_prime_UTR 40.0%
!!! CTAGTTTTGGTTCATCAGGA+TGG + chr1_1:62920009-62920028 Msa0034940:three_prime_UTR 40.0%
! GAAGAAGGAAGGTACAGTGA+AGG - chr1_1:62908286-62908305 None:intergenic 45.0%
GAATGCGAAGTGAAGTAGTG+TGG - chr1_1:62908321-62908340 None:intergenic 45.0%
AGAAGAAGAAAGAGGTGGTG+GGG - chr1_1:62908347-62908366 None:intergenic 45.0%
GAAGAAGAAGAAAGAGGTGG+TGG - chr1_1:62908349-62908368 None:intergenic 45.0%
!! GGAAGTGGTTTGTTCAACAG+AGG - chr1_1:62908386-62908405 None:intergenic 45.0%
!! TGTATGCAGCACCGATACTT+TGG + chr1_1:62908749-62908768 Msa0034940:intron 45.0%
GATTGAAAGCGGGTCATATG+TGG + chr1_1:62908771-62908790 Msa0034940:intron 45.0%
AAGCTTGAAGAGGATAAGGC+TGG + chr1_1:62909289-62909308 Msa0034940:CDS 45.0%
GGTGAGAGAGCGATAGTTTA+TGG - chr1_1:62909430-62909449 None:intergenic 45.0%
CTATCGCTCTCTCACCAATT+TGG + chr1_1:62909434-62909453 Msa0034940:intron 45.0%
GATCCATCAATTTGGTCCCT+CGG + chr1_1:62909684-62909703 Msa0034940:intron 45.0%
TAACCGAGGGACCAAATTGA+TGG - chr1_1:62909690-62909709 None:intergenic 45.0%
AATTTGGTCCCTCGGTTAAC+TGG + chr1_1:62909692-62909711 Msa0034940:intron 45.0%
! TCCCTCGGTTAACTGGTTTA+GGG + chr1_1:62909699-62909718 Msa0034940:intron 45.0%
TCCCTAAACCAGTTAACCGA+GGG - chr1_1:62909703-62909722 None:intergenic 45.0%
GGCTGTCTTCAATAGCACAT+AGG + chr1_1:62909985-62910004 Msa0034940:intron 45.0%
CAGCTGAGCAAAATCACGAA+AGG - chr1_1:62910240-62910259 None:intergenic 45.0%
CTCAGCTGATGAGAAATGCA+GGG + chr1_1:62910252-62910271 Msa0034940:intron 45.0%
!! TGTACTGGTTTGCAGTTACC+TGG + chr1_1:62910277-62910296 Msa0034940:CDS 45.0%
CTATGGGATCATCTCCTGAT+GGG - chr1_1:62910528-62910547 None:intergenic 45.0%
TCTATGGGATCATCTCCTGA+TGG - chr1_1:62910529-62910548 None:intergenic 45.0%
CACGGTGTTTGGAGAACTAA+AGG + chr1_1:62910571-62910590 Msa0034940:CDS 45.0%
TAAAGGGCCAAAAAGTTGGG+AGG + chr1_1:62910588-62910607 Msa0034940:CDS 45.0%
AAAGGGCCAAAAAGTTGGGA+GGG + chr1_1:62910589-62910608 Msa0034940:CDS 45.0%
GCAGACTTTCATCAGATGGA+AGG + chr1_1:62910825-62910844 Msa0034940:intron 45.0%
! TCCGATGAGTTGAAACCTGA+TGG + chr1_1:62910872-62910891 Msa0034940:CDS 45.0%
! ACCTGATGGATGGGAAAATC+TGG + chr1_1:62910886-62910905 Msa0034940:CDS 45.0%
GGCTTATATTGCTTGCCAGT+CGG + chr1_1:62911158-62911177 Msa0034940:intron 45.0%
GAGAGATCATTGGCACTGTA+TGG - chr1_1:62911348-62911367 None:intergenic 45.0%
AGATAACCACCGCGAAATTC+AGG - chr1_1:62911378-62911397 None:intergenic 45.0%
GCTATACTTTCCGCTGTCTT+CGG + chr1_1:62911924-62911943 Msa0034940:intron 45.0%
CTATACTTTCCGCTGTCTTC+GGG + chr1_1:62911925-62911944 Msa0034940:intron 45.0%
TATACTTTCCGCTGTCTTCG+GGG + chr1_1:62911926-62911945 Msa0034940:intron 45.0%
TCTGATAGATACGTCGGTAC+TGG + chr1_1:62912096-62912115 Msa0034940:intron 45.0%
TGTTGCTGATCTGAATCAGG+TGG - chr1_1:62912130-62912149 None:intergenic 45.0%
! GCTTGTTGCTGATCTGAATC+AGG - chr1_1:62912133-62912152 None:intergenic 45.0%
GTCTGAATTGTCCATCACTG+TGG - chr1_1:62912212-62912231 None:intergenic 45.0%
AGGTACAACCCTGTTCTTTG+GGG + chr1_1:62912277-62912296 Msa0034940:intron 45.0%
TTGCAGGCTCTTAGTCATAC+TGG + chr1_1:62912518-62912537 Msa0034940:intron 45.0%
!! TACTGGCCTTCATGTTGTGT+TGG + chr1_1:62912535-62912554 Msa0034940:CDS 45.0%
TACTGCGAGTGAGCATTCTA+TGG + chr1_1:62912837-62912856 Msa0034940:CDS 45.0%
TCCTCGATGATCTTGTACAC+TGG + chr1_1:62912872-62912891 Msa0034940:CDS 45.0%
CCTCGATGATCTTGTACACT+GGG + chr1_1:62912873-62912892 Msa0034940:CDS 45.0%
GTTTATATCTTCACTCGCCG+TGG + chr1_1:62912916-62912935 Msa0034940:intron 45.0%
!!! AGTTTCTGGCCCTCTGATTT+TGG + chr1_1:62913524-62913543 Msa0034940:intron 45.0%
! GGCCCTCTGATTTTGGATTA+TGG + chr1_1:62913531-62913550 Msa0034940:intron 45.0%
TGATTTCGTGACATGGATGC+AGG + chr1_1:62913833-62913852 Msa0034940:intron 45.0%
TATGGTGAAGGATGGGACTT+TGG + chr1_1:62914064-62914083 Msa0034940:CDS 45.0%
AAGTTGCCAAAAATGGGCGT+GGG + chr1_1:62914089-62914108 Msa0034940:CDS 45.0%
! GTTTATCCCACGCCCATTTT+TGG - chr1_1:62914098-62914117 None:intergenic 45.0%
GCTTCTCAGTTCAATCTTGC+TGG + chr1_1:62914118-62914137 Msa0034940:CDS 45.0%
TTGCTGGAACACAAATTGGG+AGG + chr1_1:62914134-62914153 Msa0034940:CDS 45.0%
TGGAACACAAATTGGGAGGT+AGG + chr1_1:62914138-62914157 Msa0034940:intron 45.0%
! AAGCAGCATGTGGTGGAAAA+AGG - chr1_1:62914169-62914188 None:intergenic 45.0%
AAATGGAGATCCACCAAGCA+CGG - chr1_1:62914475-62914494 None:intergenic 45.0%
GTCACAAAACCCTGTTGAAG+AGG - chr1_1:62914504-62914523 None:intergenic 45.0%
!! CTTCAACAGGGTTTTGTGAC+TGG + chr1_1:62914504-62914523 Msa0034940:CDS 45.0%
!!! TGTGACTGGTCTACTTTTGC+AGG + chr1_1:62914518-62914537 Msa0034940:CDS 45.0%
ATCAAGATGCTTGAGAAGGG+AGG - chr1_1:62914586-62914605 None:intergenic 45.0%
AGCCATTAGGCTGCAGAAAT+AGG - chr1_1:62914892-62914911 None:intergenic 45.0%
CAGCCTAATGGCTATGATCA+TGG + chr1_1:62914899-62914918 Msa0034940:intron 45.0%
TGCATCAATGGATCACATCC+AGG + chr1_1:62914952-62914971 Msa0034940:CDS 45.0%
TTGAATATTGCAGTGCCTGC+TGG + chr1_1:62915041-62915060 Msa0034940:intron 45.0%
CTCCCCTTAAGATGGATACT+TGG + chr1_1:62915374-62915393 Msa0034940:intron 45.0%
!! GGTCCACTTGCTATGTCTAT+TGG + chr1_1:62915758-62915777 Msa0034940:intron 45.0%
AAGCTCTCGAATTCTTGGAG+GGG - chr1_1:62916120-62916139 None:intergenic 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - chr1_1:62916121-62916140 None:intergenic 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr1_1:62916125-62916144 None:intergenic 45.0%
!! CGTCGATTCCTAATAAGGCT+TGG + chr1_1:62916536-62916555 Msa0034940:intron 45.0%
AGAGTGTGGTGAAATATGGG+TGG - chr1_1:62916659-62916678 None:intergenic 45.0%
AACAACATTGTCTCGCGCTT+AGG - chr1_1:62916693-62916712 None:intergenic 45.0%
! TCTGGAGCATGGACATATAC+AGG - chr1_1:62916725-62916744 None:intergenic 45.0%
! CCATAGACAAATCTGGAGCA+TGG - chr1_1:62916736-62916755 None:intergenic 45.0%
CCATGCTCCAGATTTGTCTA+TGG + chr1_1:62916733-62916752 Msa0034940:intron 45.0%
! GTTGAGGTGTTAGAGAAGAG+TGG + chr1_1:62916780-62916799 Msa0034940:intron 45.0%
TTAGAGAAGAGTGGCAGCAA+TGG + chr1_1:62916789-62916808 Msa0034940:intron 45.0%
GAACTCTTAGGCTCTGTTTG+TGG + chr1_1:62916976-62916995 Msa0034940:intron 45.0%
TTAGGCTCTGTTTGTGGGTT+TGG + chr1_1:62916982-62917001 Msa0034940:intron 45.0%
! GGAGGAGTTTGAAGGGTTTT+GGG - chr1_1:62917148-62917167 None:intergenic 45.0%
! AGGAGGAGTTTGAAGGGTTT+TGG - chr1_1:62917149-62917168 None:intergenic 45.0%
GTATTGGAGGAGGAGTTTGA+AGG - chr1_1:62917156-62917175 None:intergenic 45.0%
AAAGAATGGAGAGCTATGGG+AGG - chr1_1:62917246-62917265 None:intergenic 45.0%
!!! CTCTGTTTGGGAGTTTTGAG+GGG - chr1_1:62917310-62917329 None:intergenic 45.0%
!! GCTCTGTTTGGGAGTTTTGA+GGG - chr1_1:62917311-62917330 None:intergenic 45.0%
TAGATACCTGCTTGCAGCTT+TGG + chr1_1:62917443-62917462 Msa0034940:intron 45.0%
AACAAACCAAAGCTGCAAGC+AGG - chr1_1:62917452-62917471 None:intergenic 45.0%
TACAGTCTCTATGGGGTATG+AGG - chr1_1:62917636-62917655 None:intergenic 45.0%
CAACAATGTGGCTGTCAAAG+AGG + chr1_1:62917763-62917782 Msa0034940:intron 45.0%
GATACTCCGCTCAAAATCAC+TGG + chr1_1:62918343-62918362 Msa0034940:CDS 45.0%
! CTCGATCCAGTGATTTTGAG+CGG - chr1_1:62918352-62918371 None:intergenic 45.0%
TCGAGATTCATACAACTCCG+GGG + chr1_1:62918367-62918386 Msa0034940:CDS 45.0%
ATTCATACAACTCCGGGGAT+TGG + chr1_1:62918372-62918391 Msa0034940:CDS 45.0%
ATACCTGTTGAACCAATCCC+CGG - chr1_1:62918387-62918406 None:intergenic 45.0%
AAGACCAACACCCCAGTTAT+TGG - chr1_1:62918625-62918644 None:intergenic 45.0%
GCTAGGATGTCAATCCTTTG+AGG - chr1_1:62919069-62919088 None:intergenic 45.0%
ATGGTCATGATGGCTTTCCT+GGG + chr1_1:62919510-62919529 Msa0034940:CDS 45.0%
TCTTCAATTGCATCCCGTTC+AGG + chr1_1:62919710-62919729 Msa0034940:CDS 45.0%
CTACAACACAGTACACACCA+TGG - chr1_1:62919803-62919822 None:intergenic 45.0%
CATGGTGTGTACTGTGTTGT+AGG + chr1_1:62919801-62919820 Msa0034940:intron 45.0%
!! TGAATGCTTTGTTTCGGGTG+TGG + chr1_1:62919942-62919961 Msa0034940:three_prime_UTR 45.0%
!!! GTTTTGAGGTGTGACTGTGA+AGG - chr1_1:62920046-62920065 None:intergenic 45.0%
!!! CTTTTATTAAAAAAAAAAAT+TGG - chr1_1:62913564-62913583 None:intergenic 5.0%
AGTGAAGGACGAGGGAATGA+TGG - chr1_1:62908271-62908290 None:intergenic 50.0%
! GAAGGTACAGTGAAGGACGA+GGG - chr1_1:62908279-62908298 None:intergenic 50.0%
TCAGACCTCGCCCAAATTAC+TGG + chr1_1:62909634-62909653 Msa0034940:intron 50.0%
TAGCTCCAGTAATTTGGGCG+AGG - chr1_1:62909642-62909661 None:intergenic 50.0%
! GTCCCTCGGTTAACTGGTTT+AGG + chr1_1:62909698-62909717 Msa0034940:intron 50.0%
GTCCCTAAACCAGTTAACCG+AGG - chr1_1:62909704-62909723 None:intergenic 50.0%
GCTTTGTAGCCTCGAATGTG+TGG - chr1_1:62909885-62909904 None:intergenic 50.0%
GCTCAGCTGATGAGAAATGC+AGG + chr1_1:62910251-62910270 Msa0034940:intron 50.0%
GAGAAATGCAGGGACTGTAC+TGG + chr1_1:62910262-62910281 Msa0034940:CDS 50.0%
! TCTGAGAAAAGTGCACCGAG+TGG - chr1_1:62910334-62910353 None:intergenic 50.0%
!!! ACTCGGTGCACTTTTCTCAG+AGG + chr1_1:62910333-62910352 Msa0034940:CDS 50.0%
GTTCCTCTTGAGGAGGAACA+CGG + chr1_1:62910553-62910572 Msa0034940:CDS 50.0%
TTGAGGAGGAACACGGTGTT+TGG + chr1_1:62910560-62910579 Msa0034940:CDS 50.0%
!! TTTTCAACCCGCGAAGTGCT+CGG - chr1_1:62910649-62910668 None:intergenic 50.0%
! GCCAGATTTTCCCATCCATC+AGG - chr1_1:62910890-62910909 None:intergenic 50.0%
! GTGTATCGACAACTACCGAC+TGG - chr1_1:62911176-62911195 None:intergenic 50.0%
AGGCTGCACAGAGAGATCAT+TGG - chr1_1:62911358-62911377 None:intergenic 50.0%
TCTGTGCAGCCTGAATTTCG+CGG + chr1_1:62911366-62911385 Msa0034940:CDS 50.0%
GAAAGTTTCCCCGAAGACAG+CGG - chr1_1:62911937-62911956 None:intergenic 50.0%
TAGGGACACCCCAAAGAACA+GGG - chr1_1:62912288-62912307 None:intergenic 50.0%
TTAGGGACACCCCAAAGAAC+AGG - chr1_1:62912289-62912308 None:intergenic 50.0%
!! GTTCTTTGGGGTGTCCCTAA+AGG + chr1_1:62912289-62912308 Msa0034940:CDS 50.0%
CCCAGTGTACAAGATCATCG+AGG - chr1_1:62912876-62912895 None:intergenic 50.0%
TATATCTTCACTCGCCGTGG+TGG + chr1_1:62912919-62912938 Msa0034940:intron 50.0%
! GGTTGGTCATAACCTGGCTA+AGG + chr1_1:62913685-62913704 Msa0034940:intron 50.0%
TGGTCATAACCTGGCTAAGG+TGG + chr1_1:62913688-62913707 Msa0034940:intron 50.0%
TGTATATGGCCACCTTAGCC+AGG - chr1_1:62913700-62913719 None:intergenic 50.0%
GAAGTTGCCAAAAATGGGCG+TGG + chr1_1:62914088-62914107 Msa0034940:CDS 50.0%
CGAATTCGTGATTCCGTGCT+TGG + chr1_1:62914459-62914478 Msa0034940:CDS 50.0%
ATTCGTGATTCCGTGCTTGG+TGG + chr1_1:62914462-62914481 Msa0034940:CDS 50.0%
! GTGCTTGGTGGATCTCCATT+TGG + chr1_1:62914474-62914493 Msa0034940:CDS 50.0%
TGTTGAAGAGGGTGGCCAAA+TGG - chr1_1:62914492-62914511 None:intergenic 50.0%
ATTTGGCCACCCTCTTCAAC+AGG + chr1_1:62914491-62914510 Msa0034940:CDS 50.0%
TTTGGCCACCCTCTTCAACA+GGG + chr1_1:62914492-62914511 Msa0034940:CDS 50.0%
CAAAACCCTGTTGAAGAGGG+TGG - chr1_1:62914500-62914519 None:intergenic 50.0%
ATGCTTGAGAAGGGAGGAGA+AGG - chr1_1:62914580-62914599 None:intergenic 50.0%
AACCAACTCCCAAGGACAAG+AGG + chr1_1:62915725-62915744 Msa0034940:CDS 50.0%
TACCTCTTGTCCTTGGGAGT+TGG - chr1_1:62915730-62915749 None:intergenic 50.0%
GTTGTTGGGGAAGTAGCTGA+TGG + chr1_1:62916008-62916027 Msa0034940:intron 50.0%
GGGAAGTAGCTGATGGAAAC+TGG + chr1_1:62916015-62916034 Msa0034940:intron 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - chr1_1:62916122-62916141 None:intergenic 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + chr1_1:62916119-62916138 Msa0034940:intron 50.0%
AAGTAACCCACAACAGCCTG+TGG + chr1_1:62916177-62916196 Msa0034940:intron 50.0%
GAATTGTGGGCTCTGCAATG+TGG + chr1_1:62916374-62916393 Msa0034940:intron 50.0%
! CTTGAGTTTGTAGTGGAGGG+CGG + chr1_1:62916422-62916441 Msa0034940:intron 50.0%
GCGCGAGACAATGTTGTTGT+CGG + chr1_1:62916695-62916714 Msa0034940:intron 50.0%
GGAGCATGGACATATACAGG+TGG - chr1_1:62916722-62916741 None:intergenic 50.0%
! GTATTGACGGTAGCTGATGC+TGG + chr1_1:62916758-62916777 Msa0034940:intron 50.0%
! AGTACAGGTGGTAGCGATGA+TGG + chr1_1:62916856-62916875 Msa0034940:CDS 50.0%
GCTCTGTTTGTGGGTTTGGA+GGG + chr1_1:62916986-62917005 Msa0034940:intron 50.0%
CTCTGTTTGTGGGTTTGGAG+GGG + chr1_1:62916987-62917006 Msa0034940:intron 50.0%
TTTGTGGGTTTGGAGGGGTA+GGG + chr1_1:62916992-62917011 Msa0034940:intron 50.0%
!!! GAGTTTTGAGGGGAGGAGAA+GGG - chr1_1:62917300-62917319 None:intergenic 50.0%
!!! TGTTTGGGAGTTTTGAGGGG+AGG - chr1_1:62917307-62917326 None:intergenic 50.0%
! GGCTCTGTTTGGGAGTTTTG+AGG - chr1_1:62917312-62917331 None:intergenic 50.0%
ACAGCTAGGAAGTTTGGACC+AGG + chr1_1:62917345-62917364 Msa0034940:intron 50.0%
GGGTATGAGGCAAATGCAAC+GGG - chr1_1:62917623-62917642 None:intergenic 50.0%
GGGGTATGAGGCAAATGCAA+CGG - chr1_1:62917624-62917643 None:intergenic 50.0%
TCAGCCACACTGATATCCGT+CGG - chr1_1:62917993-62918012 None:intergenic 50.0%
!! TCCTTTGAGGCCTGAAGGAT+GGG - chr1_1:62919056-62919075 None:intergenic 50.0%
!! ATCCTTTGAGGCCTGAAGGA+TGG - chr1_1:62919057-62919076 None:intergenic 50.0%
!! GTCAATCCTTTGAGGCCTGA+AGG - chr1_1:62919061-62919080 None:intergenic 50.0%
GTATAGCATTTGCCGTCCTC+AGG - chr1_1:62919149-62919168 None:intergenic 50.0%
GAGGACGGCAAATGCTATAC+AGG + chr1_1:62919149-62919168 Msa0034940:CDS 50.0%
CGAGTACGCTTTCACAACAC+TGG + chr1_1:62919446-62919465 Msa0034940:CDS 50.0%
ATGACTCCAGAAACCAGCGA+TGG - chr1_1:62919473-62919492 None:intergenic 50.0%
GATGGTCATGATGGCTTTCC+TGG + chr1_1:62919509-62919528 Msa0034940:CDS 50.0%
! GGAAGGTACAGTGAAGGACG+AGG - chr1_1:62908280-62908299 None:intergenic 55.0%
ACACCGTGTTCCTCCTCAAG+AGG - chr1_1:62910559-62910578 None:intergenic 55.0%
TATACCACCCGAGCACTTCG+CGG + chr1_1:62910638-62910657 Msa0034940:CDS 55.0%
! TTTCAACCCGCGAAGTGCTC+GGG - chr1_1:62910648-62910667 None:intergenic 55.0%
GAGAAGGGAGGAGAAGGAGT+AGG - chr1_1:62914574-62914593 None:intergenic 55.0%
GGGAAACCACAGGCTGTTGT+GGG - chr1_1:62916186-62916205 None:intergenic 55.0%
AGGGAAACCACAGGCTGTTG+TGG - chr1_1:62916187-62916206 None:intergenic 55.0%
! ACGGTAGCTGATGCTGGTTG+AGG + chr1_1:62916764-62916783 Msa0034940:intron 55.0%
! ACAGGTGGTAGCGATGATGG+CGG + chr1_1:62916859-62916878 Msa0034940:CDS 55.0%
!! GATGATGGCGGAGTCAGATG+TGG + chr1_1:62916871-62916890 Msa0034940:intron 55.0%
GGCTCTGTTTGTGGGTTTGG+AGG + chr1_1:62916985-62917004 Msa0034940:intron 55.0%
GTTTGTGGGTTTGGAGGGGT+AGG + chr1_1:62916991-62917010 Msa0034940:intron 55.0%
! ATGGGAGGCAAGGGCTTTGA+GGG - chr1_1:62917231-62917250 None:intergenic 55.0%
TATGGGAGGCAAGGGCTTTG+AGG - chr1_1:62917232-62917251 None:intergenic 55.0%
TGGAGAGCTATGGGAGGCAA+GGG - chr1_1:62917240-62917259 None:intergenic 55.0%
ATGGAGAGCTATGGGAGGCA+AGG - chr1_1:62917241-62917260 None:intergenic 55.0%
TTTGAGGGGAGGAGAAGGGA+GGG - chr1_1:62917296-62917315 None:intergenic 55.0%
!! TTTTGAGGGGAGGAGAAGGG+AGG - chr1_1:62917297-62917316 None:intergenic 55.0%
!!! GGAGTTTTGAGGGGAGGAGA+AGG - chr1_1:62917301-62917320 None:intergenic 55.0%
TGGGGCCAGGGGATATACTA+TGG - chr1_1:62917667-62917686 None:intergenic 55.0%
AAGTGGAAAAGTGGGGCCAG+GGG - chr1_1:62917678-62917697 None:intergenic 55.0%
GAAGTGGAAAAGTGGGGCCA+GGG - chr1_1:62917679-62917698 None:intergenic 55.0%
AGAAGTGGAAAAGTGGGGCC+AGG - chr1_1:62917680-62917699 None:intergenic 55.0%
GACTCCGACGGATATCAGTG+TGG + chr1_1:62917986-62918005 Msa0034940:intron 55.0%
TCAGTGTGGCTGAGAGATGC+AGG + chr1_1:62918000-62918019 Msa0034940:CDS 55.0%
!! ACTCCGGGGATTGGTTCAAC+AGG + chr1_1:62918381-62918400 Msa0034940:CDS 55.0%
! GGTAAGTCGGTGTCCTAGTG+TGG - chr1_1:62918877-62918896 None:intergenic 55.0%
AAGGATGGGTCTGCCAGTCT+TGG - chr1_1:62919042-62919061 None:intergenic 55.0%
ACCCATCCTTCAGGCCTCAA+AGG + chr1_1:62919052-62919071 Msa0034940:CDS 55.0%
!! CTTCACCACTTTTCCGCCTG+AGG + chr1_1:62919130-62919149 Msa0034940:CDS 55.0%
!! ACCACTTTTCCGCCTGAGGA+CGG + chr1_1:62919134-62919153 Msa0034940:CDS 55.0%
TAGCATTTGCCGTCCTCAGG+CGG - chr1_1:62919146-62919165 None:intergenic 55.0%
TCACAACACTGGACCATCGC+TGG + chr1_1:62919457-62919476 Msa0034940:CDS 55.0%
!! ACTGGACCATCGCTGGTTTC+TGG + chr1_1:62919464-62919483 Msa0034940:CDS 55.0%
CTTTCCTGGGTTGTCTCAGC+TGG + chr1_1:62919523-62919542 Msa0034940:CDS 55.0%
ATACCACCCGAGCACTTCGC+GGG + chr1_1:62910639-62910658 Msa0034940:CDS 60.0%
GTGCAGCCTGAATTTCGCGG+TGG + chr1_1:62911369-62911388 Msa0034940:CDS 60.0%
GGGCTCTGCAATGTGGAGAG+TGG + chr1_1:62916381-62916400 Msa0034940:intron 60.0%
! TTTGTAGTGGAGGGCGGCTG+TGG + chr1_1:62916428-62916447 Msa0034940:intron 60.0%
TGGGTTTGGAGGGGTAGGGA+AGG + chr1_1:62916996-62917015 Msa0034940:intron 60.0%
GGGTTTGGAGGGGTAGGGAA+GGG + chr1_1:62916997-62917016 Msa0034940:intron 60.0%
!! TGGGAGGCAAGGGCTTTGAG+GGG - chr1_1:62917230-62917249 None:intergenic 60.0%
!! GGGTGTTGGTCTTCCTCCAC+AGG + chr1_1:62918632-62918651 Msa0034940:CDS 60.0%
GACTGGCAGACCCATCCTTC+AGG + chr1_1:62919043-62919062 Msa0034940:CDS 60.0%
GGATCCAGCTGAGACAACCC+AGG - chr1_1:62919530-62919549 None:intergenic 60.0%
CAGCTGTGTTCGTCGAGCCA+AGG + chr1_1:62919902-62919921 Msa0034940:CDS 60.0%
TAGTGGAGGGCGGCTGTGGT+TGG + chr1_1:62916432-62916451 Msa0034940:intron 65.0%
!! GGGAGGCAAGGGCTTTGAGG+GGG - chr1_1:62917229-62917248 None:intergenic 65.0%
GCCGTCCTCAGGCGGAAAAG+TGG - chr1_1:62919138-62919157 None:intergenic 65.0%
! CAACCCGCGAAGTGCTCGGG+TGG - chr1_1:62910645-62910664 None:intergenic 70.0%
GAGGGCGGCTGTGGTTGGCG+TGG + chr1_1:62916437-62916456 Msa0034940:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62908190 62920109 62908190 ID=Msa0034940;Name=Msa0034940
chr1_1 mRNA 62908190 62920109 62908190 ID=Msa0034940-mRNA-1;Parent=Msa0034940;Name=Msa0034940-mRNA-1;_AED=0.07;_eAED=0.07;_QI=12|0.92|0.96|0.96|1|1|29|176|988
chr1_1 exon 62908190 62908414 62908190 ID=Msa0034940-mRNA-1:exon:19930;Parent=Msa0034940-mRNA-1
chr1_1 exon 62908554 62908701 62908554 ID=Msa0034940-mRNA-1:exon:19931;Parent=Msa0034940-mRNA-1
chr1_1 exon 62909272 62909324 62909272 ID=Msa0034940-mRNA-1:exon:19932;Parent=Msa0034940-mRNA-1
chr1_1 exon 62909867 62909975 62909867 ID=Msa0034940-mRNA-1:exon:19933;Parent=Msa0034940-mRNA-1
chr1_1 exon 62910257 62910393 62910257 ID=Msa0034940-mRNA-1:exon:19934;Parent=Msa0034940-mRNA-1
chr1_1 exon 62910499 62910698 62910499 ID=Msa0034940-mRNA-1:exon:19935;Parent=Msa0034940-mRNA-1
chr1_1 exon 62910829 62910978 62910829 ID=Msa0034940-mRNA-1:exon:19936;Parent=Msa0034940-mRNA-1
chr1_1 exon 62911353 62911413 62911353 ID=Msa0034940-mRNA-1:exon:19937;Parent=Msa0034940-mRNA-1
chr1_1 exon 62911574 62911694 62911574 ID=Msa0034940-mRNA-1:exon:19938;Parent=Msa0034940-mRNA-1
chr1_1 exon 62912104 62912194 62912104 ID=Msa0034940-mRNA-1:exon:19939;Parent=Msa0034940-mRNA-1
chr1_1 exon 62912279 62912372 62912279 ID=Msa0034940-mRNA-1:exon:19940;Parent=Msa0034940-mRNA-1
chr1_1 exon 62912524 62912619 62912524 ID=Msa0034940-mRNA-1:exon:19941;Parent=Msa0034940-mRNA-1
chr1_1 exon 62912769 62912909 62912769 ID=Msa0034940-mRNA-1:exon:19942;Parent=Msa0034940-mRNA-1
chr1_1 exon 62913319 62913369 62913319 ID=Msa0034940-mRNA-1:exon:19943;Parent=Msa0034940-mRNA-1
chr1_1 exon 62913855 62913925 62913855 ID=Msa0034940-mRNA-1:exon:19944;Parent=Msa0034940-mRNA-1
chr1_1 exon 62914063 62914155 62914063 ID=Msa0034940-mRNA-1:exon:19945;Parent=Msa0034940-mRNA-1
chr1_1 exon 62914449 62914539 62914449 ID=Msa0034940-mRNA-1:exon:19946;Parent=Msa0034940-mRNA-1
chr1_1 exon 62914902 62914973 62914902 ID=Msa0034940-mRNA-1:exon:19947;Parent=Msa0034940-mRNA-1
chr1_1 exon 62915690 62915746 62915690 ID=Msa0034940-mRNA-1:exon:19948;Parent=Msa0034940-mRNA-1
chr1_1 exon 62916793 62916882 62916793 ID=Msa0034940-mRNA-1:exon:19949;Parent=Msa0034940-mRNA-1
chr1_1 exon 62917584 62917652 62917584 ID=Msa0034940-mRNA-1:exon:19950;Parent=Msa0034940-mRNA-1
chr1_1 exon 62917826 62917882 62917826 ID=Msa0034940-mRNA-1:exon:19951;Parent=Msa0034940-mRNA-1
chr1_1 exon 62917987 62918061 62917987 ID=Msa0034940-mRNA-1:exon:19952;Parent=Msa0034940-mRNA-1
chr1_1 exon 62918314 62918402 62918314 ID=Msa0034940-mRNA-1:exon:19953;Parent=Msa0034940-mRNA-1
chr1_1 exon 62918602 62918679 62918602 ID=Msa0034940-mRNA-1:exon:19954;Parent=Msa0034940-mRNA-1
chr1_1 exon 62919032 62919170 62919032 ID=Msa0034940-mRNA-1:exon:19955;Parent=Msa0034940-mRNA-1
chr1_1 exon 62919443 62919552 62919443 ID=Msa0034940-mRNA-1:exon:19956;Parent=Msa0034940-mRNA-1
chr1_1 exon 62919632 62919731 62919632 ID=Msa0034940-mRNA-1:exon:19957;Parent=Msa0034940-mRNA-1
chr1_1 exon 62919823 62920109 62919823 ID=Msa0034940-mRNA-1:exon:19958;Parent=Msa0034940-mRNA-1
chr1_1 five_prime_UTR 62908190 62908201 62908190 ID=Msa0034940-mRNA-1:five_prime_utr;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62908202 62908414 62908202 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62908554 62908701 62908554 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62909272 62909324 62909272 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62909867 62909975 62909867 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62910257 62910393 62910257 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62910499 62910698 62910499 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62910829 62910978 62910829 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62911353 62911413 62911353 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62911574 62911694 62911574 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62912104 62912194 62912104 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62912279 62912372 62912279 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62912524 62912619 62912524 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62912769 62912909 62912769 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62913319 62913369 62913319 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62913855 62913925 62913855 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62914063 62914155 62914063 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62914449 62914539 62914449 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62914902 62914973 62914902 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62915690 62915746 62915690 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62916793 62916882 62916793 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62917584 62917652 62917584 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62917826 62917882 62917826 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62917987 62918061 62917987 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62918314 62918402 62918314 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62918602 62918679 62918602 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62919032 62919170 62919032 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62919443 62919552 62919443 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62919632 62919731 62919632 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 CDS 62919823 62919933 62919823 ID=Msa0034940-mRNA-1:cds;Parent=Msa0034940-mRNA-1
chr1_1 three_prime_UTR 62919934 62920109 62919934 ID=Msa0034940-mRNA-1:three_prime_utr;Parent=Msa0034940-mRNA-1
Gene Sequence

>Msa0034940

ATGCTTCGTTTAACATCATCACCATTTTCACTTTCTTTCCCTTCAATTTCCAACCTCAATCTTCTTCCATCATTCCCTCGTCCTTCACTGTACCTTCCTTCTTCATCTACTACTTTCCACACTACTTCACTTCGCATTCACACCCCACCACCTCTTTCTTCTTCTTCTTCCCTTTCTTCTTCCTCTGTTGAACAAACCACTTCCATTTCTCAGATGCAGGATAATTTGTTATTGTACTCAAGAGCTTATTGGGTCACTCAATCTCTTATTGCTTGGAATGTTGATCATCATCAAAATGGGGTCTGTTACCTACTTTCCAGCAAAGATGCTTCTTTGAATATTTCGAATTCTCAAATTCAAGGCGAGGATTTGAAAATTAAGCTTGAAGAGGATAAGGCTGGCCTTCCTGCAAATGTGGTGGAGAAATTTCCACACATTCGAGGCTACAAAGCTTTCAATATGCCTCCCGGTTCAGATATTAAATCTCTTCTTAAATCCCAGTTGGCGATTGTTATTTATGATTCTGATGAGAAATGCAGGGACTGTACTGGTTTGCAGTTACCTGGTGTTTTAGATGAGCTTTTTTCATATAATGGTCCACTCGGTGCACTTTTCTCAGAGGAAGCTGTATCACTTTATTTGTGGGCGCCTACCGCTCAATCGGTGCGTGCTTACATCTATAAGCACCCATCAGGAGATGATCCCATAGAAATTGTTCCTCTTGAGGAGGAACACGGTGTTTGGAGAACTAAAGGGCCAAAAAGTTGGGAGGGTTGTTACTATGTTTATGAAGTATGTGTATACCACCCGAGCACTTCGCGGGTTGAAAAATGCTATGCTAATGATCCATATGCTAGAGGACTTTCATCAGATGGAAGGCGTACTTTTCTGCTTAATCTTGACTCCGATGAGTTGAAACCTGATGGATGGGAAAATCTGGCAAATGAGAAACCCATTTTACATTCTTTCTCTGATATAAGCATATATGAATTGCATATAAGGGATTTCAGTGCCAATGATCTCTCTGTGCAGCCTGAATTTCGCGGTGGTTATCTTGCCTTCACTTTGACGGATTCAGCAGGTGTACTTCATCTAAAGAAATTATCAAGTGCGGGTATCACCCATGTCCATCTATTGCCAACATTTCAATTTGCTGGGGTTGATGATCAAAAAGAGAACTGGAGAAATGTTGATACGTCGGTACTGGAAAGCTTTCCACCTGATTCAGATCAGCAACAAGCTCTTATTACAGCCATCCAAAACTTTGATGGATATAACTGGGGGTACAACCCTGTTCTTTGGGGTGTCCCTAAAGGCAGCTATGCAAGTAATCCAAATGGTCCAAACCGTACAATTGAGTTTCGTAAGATGGTTCAGGCTCTTAGTCATACTGGCCTTCATGTTGTGTTGGATACTGTCTACAATCATTTGCAGGGAAATGGGCCCTTTGATGAACATTCTGTCCTTGATAAGATTGTTCCAGGTTACTATCTAAGAAGGAACACAGATGGTTTCATTGAGAACAGTACTTGTATGAATAATACTGCGAGTGAGCATTCTATGGTTGAGCGTTTGATCCTCGATGATCTTGTACACTGGGCAGTCAATTATAAGATTGATGGGTTCAGATTTGACCTTATGGGTCATATAATGAAGAGTACAATGGTGAAAGCAAAAAATGCTCTCCAACGTTTAACAAAAGAAAAGGATGGAGTTGATGGTTCAAGCATCTACATATATGGTGAAGGATGGGACTTTGGTGAAGTTGCCAAAAATGGGCGTGGGATAAACGCTTCTCAGTTCAATCTTGCTGGAACACAAATTGGGAGCTTTAACGATCGAATTCGTGATTCCGTGCTTGGTGGATCTCCATTTGGCCACCCTCTTCAACAGGGTTTTGTGACTGGTCTACTTTTGCAGCCTAATGGCTATGATCATGGAACAGAAGCTAATATGAAATCCATGCTTTCTGCATCAATGGATCACATCCAGATTGGAATGGCTGGAAACTTGAAAGATTTTGTACTAACCAACTCCCAAGGACAAGAGAGAAGAGTGGCAGCAATGGCAGTAGTAGATAAATGGAGAGGTGGAAGTTATGACAAAGTTGTAAGTACAGGTGGTAGCGATGATGGCGGAGTGAAAGGGTCGGAAGTATTAACATATGGTGGGACACCCGTTGCATTTGCCTCATACCCCATAGAGACTGTCAATTATGTTTCTGCTCATGATAATGAAACCCTCTTTGACATTGTGAGCTTAAAGACTCCGACGGATATCAGTGTGGCTGAGAGATGCAGGATAAACCATTTGGCAACAAGTGTTATAGCATTATCACAGGGCATACCATTTTTTCACTCTGGTGATGAGATACTCCGCTCAAAATCACTGGATCGAGATTCATACAACTCCGGGGATTGGTTCAACAGGCTTGACTTTACATACAATTCCAATAACTGGGGTGTTGGTCTTCCTCCACAGGAGAAAAATGAAAAACACTGGTCACTAATGAAACCAAGACTGGCAGACCCATCCTTCAGGCCTCAAAGGATTGACATCCTAGCTACAATGGACAATTTCTTAAACCTGTTGCGTATAAGGTATTCTTCACCACTTTTCCGCCTGAGGACGGCAAATGCTATACAGCAACGAGTACGCTTTCACAACACTGGACCATCGCTGGTTTCTGGAGTCATAGTGATGAGCATTGAAGATGGTCATGATGGCTTTCCTGGGTTGTCTCAGCTGGATCCCATATATTCGTTCATTGTTGTCGTTTTCAACGCGAGTCCACAAGAAATATCATTTGTTAGCCCTTCCCTGCAATCAAGAAATCTTCAATTGCATCCCGTTCAGGAAATGTCATCTGATGAGCTTGTTAAGAGTTCAAAATATGAGGCTTCTTCTGGTTGTTTTGTTGTGTCTCGAAGGACGACAGCTGTGTTCGTCGAGCCAAGGAAAATGTAA
Protein sequence

>Msa0034940

MLRLTSSPFSLSFPSISNLNLLPSFPRPSLYLPSSSTTFHTTSLRIHTPPPLSSSSSLSSSSVEQTTSISQMQDNLLLYSRAYWVTQSLIAWNVDHHQNGVCYLLSSKDASLNISNSQIQGEDLKIKLEEDKAGLPANVVEKFPHIRGYKAFNMPPGSDIKSLLKSQLAIVIYDSDEKCRDCTGLQLPGVLDELFSYNGPLGALFSEEAVSLYLWAPTAQSVRAYIYKHPSGDDPIEIVPLEEEHGVWRTKGPKSWEGCYYVYEVCVYHPSTSRVEKCYANDPYARGLSSDGRRTFLLNLDSDELKPDGWENLANEKPILHSFSDISIYELHIRDFSANDLSVQPEFRGGYLAFTLTDSAGVLHLKKLSSAGITHVHLLPTFQFAGVDDQKENWRNVDTSVLESFPPDSDQQQALITAIQNFDGYNWGYNPVLWGVPKGSYASNPNGPNRTIEFRKMVQALSHTGLHVVLDTVYNHLQGNGPFDEHSVLDKIVPGYYLRRNTDGFIENSTCMNNTASEHSMVERLILDDLVHWAVNYKIDGFRFDLMGHIMKSTMVKAKNALQRLTKEKDGVDGSSIYIYGEGWDFGEVAKNGRGINASQFNLAGTQIGSFNDRIRDSVLGGSPFGHPLQQGFVTGLLLQPNGYDHGTEANMKSMLSASMDHIQIGMAGNLKDFVLTNSQGQERRVAAMAVVDKWRGGSYDKVVSTGGSDDGGVKGSEVLTYGGTPVAFASYPIETVNYVSAHDNETLFDIVSLKTPTDISVAERCRINHLATSVIALSQGIPFFHSGDEILRSKSLDRDSYNSGDWFNRLDFTYNSNNWGVGLPPQEKNEKHWSLMKPRLADPSFRPQRIDILATMDNFLNLLRIRYSSPLFRLRTANAIQQRVRFHNTGPSLVSGVIVMSIEDGHDGFPGLSQLDPIYSFIVVVFNASPQEISFVSPSLQSRNLQLHPVQEMSSDELVKSSKYEASSGCFVVSRRTTAVFVEPRKM*