Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487490 | XP_003598052.1 | 96.196 | 184 | 7 | 0 | 1 | 184 | 140 | 323 | 1.24e-126 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487490 | G7J060 | 96.196 | 184 | 7 | 0 | 1 | 184 | 140 | 323 | 5.92e-127 | 369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0487490 | 0.806176 | 9.341911e-50 | -8.615850e-47 |
| Msa0006050 | Msa0487490 | 0.808009 | 3.822221e-50 | -8.615850e-47 |
| Msa0012380 | Msa0487490 | 0.812294 | 4.557664e-51 | -8.615850e-47 |
| Msa0014410 | Msa0487490 | 0.852856 | 3.507018e-61 | -8.615850e-47 |
| Msa0020630 | Msa0487490 | 0.839425 | 1.596762e-57 | -8.615850e-47 |
| Msa0034560 | Msa0487490 | -0.818116 | 2.317962e-52 | -8.615850e-47 |
| Msa0037820 | Msa0487490 | 0.800843 | 1.191760e-48 | -8.615850e-47 |
| Msa0040550 | Msa0487490 | -0.864082 | 1.570303e-64 | -8.615850e-47 |
| Msa0043940 | Msa0487490 | 0.805615 | 1.225767e-49 | -8.615850e-47 |
| Msa0044180 | Msa0487490 | 0.812438 | 4.240188e-51 | -8.615850e-47 |
| Msa0044710 | Msa0487490 | 0.802214 | 6.239950e-49 | -8.615850e-47 |
| Msa0057530 | Msa0487490 | 0.801915 | 7.187504e-49 | -8.615850e-47 |
| Msa0061600 | Msa0487490 | -0.810110 | 1.356663e-50 | -8.615850e-47 |
| Msa0062020 | Msa0487490 | -0.825891 | 3.660176e-54 | -8.615850e-47 |
| Msa0064550 | Msa0487490 | 0.866371 | 2.994204e-65 | -8.615850e-47 |
| Msa0068410 | Msa0487490 | 0.812665 | 3.781268e-51 | -8.615850e-47 |
| Msa0084630 | Msa0487490 | 0.806398 | 8.385651e-50 | -8.615850e-47 |
| Msa0084680 | Msa0487490 | 0.815262 | 1.011486e-51 | -8.615850e-47 |
| Msa0091470 | Msa0487490 | 0.806324 | 8.693342e-50 | -8.615850e-47 |
| Msa0091480 | Msa0487490 | 0.818572 | 1.827832e-52 | -8.615850e-47 |
| Msa0092730 | Msa0487490 | 0.805185 | 1.507935e-49 | -8.615850e-47 |
| Msa0103160 | Msa0487490 | 0.831635 | 1.492911e-55 | -8.615850e-47 |
| Msa0108070 | Msa0487490 | 0.838878 | 2.213615e-57 | -8.615850e-47 |
| Msa0109490 | Msa0487490 | 0.853650 | 2.077334e-61 | -8.615850e-47 |
| Msa0114250 | Msa0487490 | 0.810360 | 1.198292e-50 | -8.615850e-47 |
| Msa0125440 | Msa0487490 | 0.821884 | 3.183607e-53 | -8.615850e-47 |
| Msa0137600 | Msa0487490 | 0.803862 | 2.847401e-49 | -8.615850e-47 |
| Msa0140290 | Msa0487490 | 0.838050 | 3.619711e-57 | -8.615850e-47 |
| Msa0154220 | Msa0487490 | 0.818644 | 1.760528e-52 | -8.615850e-47 |
| Msa0154240 | Msa0487490 | 0.859573 | 3.766343e-63 | -8.615850e-47 |
| Msa0154270 | Msa0487490 | 0.859922 | 2.957673e-63 | -8.615850e-47 |
| Msa0155610 | Msa0487490 | 0.838269 | 3.179364e-57 | -8.615850e-47 |
| Msa0159750 | Msa0487490 | 0.839354 | 1.665959e-57 | -8.615850e-47 |
| Msa0171920 | Msa0487490 | 0.849992 | 2.263932e-60 | -8.615850e-47 |
| Msa0175810 | Msa0487490 | 0.828195 | 1.028744e-54 | -8.615850e-47 |
| Msa0178940 | Msa0487490 | 0.831003 | 2.134912e-55 | -8.615850e-47 |
| Msa0182640 | Msa0487490 | 0.812658 | 3.794139e-51 | -8.615850e-47 |
| Msa0182930 | Msa0487490 | 0.806439 | 8.223074e-50 | -8.615850e-47 |
| Msa0183560 | Msa0487490 | 0.810812 | 9.567844e-51 | -8.615850e-47 |
| Msa0197030 | Msa0487490 | 0.869474 | 3.013529e-66 | -8.615850e-47 |
| Msa0198290 | Msa0487490 | 0.828642 | 8.024898e-55 | -8.615850e-47 |
| Msa0199740 | Msa0487490 | 0.858350 | 8.750466e-63 | -8.615850e-47 |
| Msa0200950 | Msa0487490 | -0.824821 | 6.557157e-54 | -8.615850e-47 |
| Msa0217470 | Msa0487490 | 0.800306 | 1.533528e-48 | -8.615850e-47 |
| Msa0218530 | Msa0487490 | -0.810818 | 9.539559e-51 | -8.615850e-47 |
| Msa0218650 | Msa0487490 | -0.817988 | 2.477859e-52 | -8.615850e-47 |
| Msa0224370 | Msa0487490 | 0.815894 | 7.317776e-52 | -8.615850e-47 |
| Msa0224400 | Msa0487490 | 0.806946 | 6.425578e-50 | -8.615850e-47 |
| Msa0373220 | Msa0487490 | 0.821057 | 4.943052e-53 | -8.615850e-47 |
| Msa0377280 | Msa0487490 | 0.845328 | 4.349214e-59 | -8.615850e-47 |
| Msa0380650 | Msa0487490 | 0.850346 | 1.801990e-60 | -8.615850e-47 |
| Msa0382590 | Msa0487490 | 0.864158 | 1.487180e-64 | -8.615850e-47 |
| Msa0387790 | Msa0487490 | 0.810260 | 1.259134e-50 | -8.615850e-47 |
| Msa0387970 | Msa0487490 | 0.838289 | 3.141697e-57 | -8.615850e-47 |
| Msa0389060 | Msa0487490 | 0.806348 | 8.592476e-50 | -8.615850e-47 |
| Msa0392050 | Msa0487490 | 0.891595 | 3.443014e-74 | -8.615850e-47 |
| Msa0392540 | Msa0487490 | 0.922972 | 4.899793e-89 | -8.615850e-47 |
| Msa0401340 | Msa0487490 | 0.870485 | 1.408257e-66 | -8.615850e-47 |
| Msa0404690 | Msa0487490 | 0.852239 | 5.258707e-61 | -8.615850e-47 |
| Msa0412190 | Msa0487490 | 0.813934 | 1.990442e-51 | -8.615850e-47 |
| Msa0421720 | Msa0487490 | 0.816565 | 5.178451e-52 | -8.615850e-47 |
| Msa0430290 | Msa0487490 | 0.847519 | 1.098920e-59 | -8.615850e-47 |
| Msa0432720 | Msa0487490 | 0.861314 | 1.118955e-63 | -8.615850e-47 |
| Msa0440310 | Msa0487490 | 0.942011 | 1.527160e-101 | -8.615850e-47 |
| Msa0448080 | Msa0487490 | 0.816750 | 4.707948e-52 | -8.615850e-47 |
| Msa0448120 | Msa0487490 | 0.866390 | 2.952019e-65 | -8.615850e-47 |
| Msa0462590 | Msa0487490 | 0.839520 | 1.508384e-57 | -8.615850e-47 |
| Msa0468020 | Msa0487490 | 0.820910 | 5.342101e-53 | -8.615850e-47 |
| Msa0469950 | Msa0487490 | 0.891794 | 2.868569e-74 | -8.615850e-47 |
| Msa0472740 | Msa0487490 | 0.824436 | 8.080190e-54 | -8.615850e-47 |
| Msa0479230 | Msa0487490 | 0.812689 | 3.735735e-51 | -8.615850e-47 |
| Msa0481490 | Msa0487490 | 0.854497 | 1.183160e-61 | -8.615850e-47 |
| Msa0238860 | Msa0487490 | 0.828099 | 1.085011e-54 | -8.615850e-47 |
| Msa0240640 | Msa0487490 | 0.835185 | 1.943547e-56 | -8.615850e-47 |
| Msa0242290 | Msa0487490 | 0.857007 | 2.187578e-62 | -8.615850e-47 |
| Msa0253160 | Msa0487490 | 0.813053 | 3.109730e-51 | -8.615850e-47 |
| Msa0258670 | Msa0487490 | -0.824194 | 9.213150e-54 | -8.615850e-47 |
| Msa0258700 | Msa0487490 | -0.819602 | 1.065692e-52 | -8.615850e-47 |
| Msa0260190 | Msa0487490 | 0.809625 | 1.724987e-50 | -8.615850e-47 |
| Msa0264940 | Msa0487490 | -0.826800 | 2.224176e-54 | -8.615850e-47 |
| Msa0265580 | Msa0487490 | 0.850166 | 2.024763e-60 | -8.615850e-47 |
| Msa0276590 | Msa0487490 | 0.837969 | 3.798433e-57 | -8.615850e-47 |
| Msa0288330 | Msa0487490 | 0.813264 | 2.794579e-51 | -8.615850e-47 |
| Msa0291940 | Msa0487490 | 0.807559 | 4.764698e-50 | -8.615850e-47 |
| Msa0297950 | Msa0487490 | -0.800790 | 1.221807e-48 | -8.615850e-47 |
| Msa0298970 | Msa0487490 | 0.801651 | 8.141067e-49 | -8.615850e-47 |
| Msa0302990 | Msa0487490 | -0.827423 | 1.577269e-54 | -8.615850e-47 |
| Msa0303440 | Msa0487490 | 0.853117 | 2.952895e-61 | -8.615850e-47 |
| Msa0303500 | Msa0487490 | 0.817089 | 3.951837e-52 | -8.615850e-47 |
| Msa0312580 | Msa0487490 | -0.819929 | 8.969681e-53 | -8.615850e-47 |
| Msa0316610 | Msa0487490 | 0.811710 | 6.110209e-51 | -8.615850e-47 |
| Msa0318250 | Msa0487490 | 0.816144 | 6.433929e-52 | -8.615850e-47 |
| Msa0318270 | Msa0487490 | 0.835549 | 1.572993e-56 | -8.615850e-47 |
| Msa0318310 | Msa0487490 | 0.839304 | 1.716233e-57 | -8.615850e-47 |
| Msa0323990 | Msa0487490 | 0.806108 | 9.655792e-50 | -8.615850e-47 |
| Msa0334980 | Msa0487490 | 0.819007 | 1.456203e-52 | -8.615850e-47 |
| Msa0335890 | Msa0487490 | -0.840806 | 6.963936e-58 | -8.615850e-47 |
| Msa0341460 | Msa0487490 | -0.804500 | 2.096451e-49 | -8.615850e-47 |
| Msa0344680 | Msa0487490 | 0.891736 | 3.024525e-74 | -8.615850e-47 |
| Msa0346790 | Msa0487490 | 0.921200 | 4.850810e-88 | -8.615850e-47 |
| Msa0352200 | Msa0487490 | 0.802632 | 5.115461e-49 | -8.615850e-47 |
| Msa0353040 | Msa0487490 | -0.804679 | 1.924040e-49 | -8.615850e-47 |
| Msa0354390 | Msa0487490 | 0.855680 | 5.363551e-62 | -8.615850e-47 |
| Msa0487490 | Msa0512310 | 0.814576 | 1.435904e-51 | -8.615850e-47 |
| Msa0487490 | Msa0524960 | 0.807878 | 4.075396e-50 | -8.615850e-47 |
| Msa0487490 | Msa0525270 | 0.878375 | 2.954752e-69 | -8.615850e-47 |
| Msa0487490 | Msa0525280 | 0.866343 | 3.055960e-65 | -8.615850e-47 |
| Msa0487490 | Msa0530340 | 0.841975 | 3.428118e-58 | -8.615850e-47 |
| Msa0487490 | Msa0530950 | 0.808208 | 3.466726e-50 | -8.615850e-47 |
| Msa0487490 | Msa0545230 | 0.841540 | 4.466582e-58 | -8.615850e-47 |
| Msa0487490 | Msa0546740 | 0.804149 | 2.481448e-49 | -8.615850e-47 |
| Msa0487490 | Msa0548210 | 0.833401 | 5.447450e-56 | -8.615850e-47 |
| Msa0487490 | Msa0549540 | 0.868799 | 4.990923e-66 | -8.615850e-47 |
| Msa0487490 | Msa0550110 | 0.810011 | 1.425023e-50 | -8.615850e-47 |
| Msa0487490 | Msa0556070 | 0.822536 | 2.247435e-53 | -8.615850e-47 |
| Msa0487490 | Msa0575850 | 0.809038 | 2.305230e-50 | -8.615850e-47 |
| Msa0487490 | Msa0583740 | 0.857908 | 1.184338e-62 | -8.615850e-47 |
| Msa0487490 | Msa0584280 | 0.814623 | 1.402179e-51 | -8.615850e-47 |
| Msa0487490 | Msa0587900 | 0.805841 | 1.098750e-49 | -8.615850e-47 |
| Msa0487490 | Msa0589290 | 0.803461 | 3.447347e-49 | -8.615850e-47 |
| Msa0487490 | Msa0589600 | 0.802169 | 6.374004e-49 | -8.615850e-47 |
| Msa0487490 | Msa0589640 | 0.832064 | 1.169715e-55 | -8.615850e-47 |
| Msa0487490 | Msa0598390 | -0.805757 | 1.144069e-49 | -8.615850e-47 |
| Msa0487490 | Msa0600820 | 0.830992 | 2.148761e-55 | -8.615850e-47 |
| Msa0487490 | Msa0604880 | 0.867192 | 1.640180e-65 | -8.615850e-47 |
| Msa0487490 | Msa0605250 | 0.856297 | 3.537875e-62 | -8.615850e-47 |
| Msa0487490 | Msa0605620 | 0.816493 | 5.376416e-52 | -8.615850e-47 |
| Msa0487490 | Msa0622250 | 0.845672 | 3.509070e-59 | -8.615850e-47 |
| Msa0487490 | Msa0627050 | 0.859855 | 3.099308e-63 | -8.615850e-47 |
| Msa0487490 | Msa0644630 | 0.813603 | 2.354273e-51 | -8.615850e-47 |
| Msa0487490 | Msa0645820 | 0.805108 | 1.565001e-49 | -8.615850e-47 |
| Msa0487490 | Msa0646190 | 0.848944 | 4.436281e-60 | -8.615850e-47 |
| Msa0487490 | Msa0646340 | 0.845157 | 4.837267e-59 | -8.615850e-47 |
| Msa0487490 | Msa0646570 | 0.810233 | 1.276007e-50 | -8.615850e-47 |
| Msa0487490 | Msa0649310 | 0.830436 | 2.939251e-55 | -8.615850e-47 |
| Msa0487490 | Msa0651400 | 0.831572 | 1.547020e-55 | -8.615850e-47 |
| Msa0487490 | Msa0657670 | 0.807012 | 6.221431e-50 | -8.615850e-47 |
| Msa0487490 | Msa0667970 | 0.810684 | 1.020080e-50 | -8.615850e-47 |
| Msa0487490 | Msa0675010 | 0.828256 | 9.946959e-55 | -8.615850e-47 |
| Msa0487490 | Msa0676100 | 0.804805 | 1.810560e-49 | -8.615850e-47 |
| Msa0487490 | Msa0679780 | 0.800777 | 1.228860e-48 | -8.615850e-47 |
| Msa0487490 | Msa0685540 | 0.804483 | 2.113969e-49 | -8.615850e-47 |
| Msa0487490 | Msa0685890 | 0.827767 | 1.304405e-54 | -8.615850e-47 |
| Msa0487490 | Msa0688110 | 0.805471 | 1.313665e-49 | -8.615850e-47 |
| Msa0487490 | Msa0693400 | 0.804308 | 2.298661e-49 | -8.615850e-47 |
| Msa0487490 | Msa0698600 | 0.806266 | 8.941244e-50 | -8.615850e-47 |
| Msa0487490 | Msa0704220 | 0.826794 | 2.230714e-54 | -8.615850e-47 |
| Msa0487490 | Msa0714600 | 0.804567 | 2.030763e-49 | -8.615850e-47 |
| Msa0487490 | Msa0729550 | 0.838798 | 2.322115e-57 | -8.615850e-47 |
| Msa0487490 | Msa0740210 | 0.825018 | 5.890474e-54 | -8.615850e-47 |
| Msa0487490 | Msa0748330 | 0.836873 | 7.247746e-57 | -8.615850e-47 |
| Msa0487490 | Msa0749150 | 0.816681 | 4.878369e-52 | -8.615850e-47 |
| Msa0487490 | Msa0761640 | 0.826523 | 2.588521e-54 | -8.615850e-47 |
| Msa0487490 | Msa0769830 | 0.837637 | 4.621765e-57 | -8.615850e-47 |
| Msa0487490 | Msa0770430 | 0.806277 | 8.893924e-50 | -8.615850e-47 |
| Msa0487490 | Msa0775580 | 0.800016 | 1.756602e-48 | -8.615850e-47 |
| Msa0487490 | Msa0777500 | -0.809981 | 1.446142e-50 | -8.615850e-47 |
| Msa0487490 | Msa0780140 | 0.829109 | 6.185375e-55 | -8.615850e-47 |
| Msa0487490 | Msa0781390 | 0.829177 | 5.954583e-55 | -8.615850e-47 |
| Msa0487490 | Msa0790640 | 0.810612 | 1.057171e-50 | -8.615850e-47 |
| Msa0487490 | Msa0792880 | 0.801703 | 7.944407e-49 | -8.615850e-47 |
| Msa0487490 | Msa0793100 | 0.803821 | 2.903364e-49 | -8.615850e-47 |
| Msa0487490 | Msa0802210 | 0.806216 | 9.163407e-50 | -8.615850e-47 |
| Msa0487490 | Msa0806720 | 0.879199 | 1.514378e-69 | -8.615850e-47 |
| Msa0487490 | Msa0806760 | 0.893480 | 6.045408e-75 | -8.615850e-47 |
| Msa0487490 | Msa0809300 | 0.825645 | 4.186257e-54 | -8.615850e-47 |
| Msa0487490 | Msa0815750 | -0.800605 | 1.332715e-48 | -8.615850e-47 |
| Msa0487490 | Msa0824140 | 0.811139 | 8.128012e-51 | -8.615850e-47 |
| Msa0487490 | Msa0828570 | 0.857905 | 1.186859e-62 | -8.615850e-47 |
| Msa0487490 | Msa0828900 | 0.808925 | 2.437256e-50 | -8.615850e-47 |
| Msa0487490 | Msa0848760 | 0.835322 | 1.795661e-56 | -8.615850e-47 |
| Msa0487490 | Msa0851740 | 0.811121 | 8.201640e-51 | -8.615850e-47 |
| Msa0487490 | Msa0853480 | 0.807343 | 5.293484e-50 | -8.615850e-47 |
| Msa0487490 | Msa0860920 | 0.837112 | 6.299414e-57 | -8.615850e-47 |
| Msa0487490 | Msa0863250 | 0.814314 | 1.640641e-51 | -8.615850e-47 |
| Msa0487490 | Msa0865990 | -0.814522 | 1.476208e-51 | -8.615850e-47 |
| Msa0487490 | Msa0882700 | 0.858498 | 7.907186e-63 | -8.615850e-47 |
| Msa0487490 | Msa0899700 | 0.802799 | 4.725376e-49 | -8.615850e-47 |
| Msa0487490 | Msa0909710 | 0.818491 | 1.906178e-52 | -8.615850e-47 |
| Msa0487490 | Msa0909720 | 0.813253 | 2.811213e-51 | -8.615850e-47 |
| Msa0487490 | Msa0944690 | 0.874845 | 4.910637e-68 | -8.615850e-47 |
| Msa0487490 | Msa0945960 | 0.887422 | 1.447298e-72 | -8.615850e-47 |
| Msa0487490 | Msa0955260 | 0.809578 | 1.765421e-50 | -8.615850e-47 |
| Msa0487490 | Msa0964680 | 0.803018 | 4.258189e-49 | -8.615850e-47 |
| Msa0487490 | Msa0968780 | 0.843972 | 1.008347e-58 | -8.615850e-47 |
| Msa0487490 | Msa0970050 | 0.803659 | 3.137051e-49 | -8.615850e-47 |
| Msa0487490 | Msa0981740 | 0.804976 | 1.668019e-49 | -8.615850e-47 |
| Msa0487490 | Msa0984000 | 0.870389 | 1.514041e-66 | -8.615850e-47 |
| Msa0487490 | Msa1004210 | 0.827773 | 1.299920e-54 | -8.615850e-47 |
| Msa0487490 | Msa1004260 | 0.813055 | 3.105767e-51 | -8.615850e-47 |
| Msa0487490 | Msa1014350 | 0.816776 | 4.646114e-52 | -8.615850e-47 |
| Msa0487490 | Msa1016670 | 0.808797 | 2.596236e-50 | -8.615850e-47 |
| Msa0487490 | Msa1034930 | 0.842154 | 3.074409e-58 | -8.615850e-47 |
| Msa0487490 | Msa1036250 | 0.811565 | 6.571138e-51 | -8.615850e-47 |
| Msa0487490 | Msa1038320 | 0.810057 | 1.392807e-50 | -8.615850e-47 |
| Msa0487490 | Msa1041080 | 0.809953 | 1.466192e-50 | -8.615850e-47 |
| Msa0487490 | Msa1046610 | 0.814462 | 1.521734e-51 | -8.615850e-47 |
| Msa0487490 | Msa1055360 | 0.811908 | 5.533030e-51 | -8.615850e-47 |
| Msa0487490 | Msa1058010 | 0.812496 | 4.117067e-51 | -8.615850e-47 |
| Msa0487490 | Msa1063920 | 0.805043 | 1.614814e-49 | -8.615850e-47 |
| Msa0487490 | Msa1069960 | 0.815765 | 7.817603e-52 | -8.615850e-47 |
| Msa0487490 | Msa1076520 | 0.823991 | 1.027844e-53 | -8.615850e-47 |
| Msa0487490 | Msa1080460 | 0.809057 | 2.283523e-50 | -8.615850e-47 |
| Msa0487490 | Msa1080620 | 0.809342 | 1.984072e-50 | -8.615850e-47 |
| Msa0487490 | Msa1080690 | 0.805265 | 1.450802e-49 | -8.615850e-47 |
| Msa0487490 | Msa1080840 | 0.806973 | 6.341187e-50 | -8.615850e-47 |
| Msa0487490 | Msa1082150 | 0.870435 | 1.462406e-66 | -8.615850e-47 |
| Msa0487490 | Msa1093390 | 0.824113 | 9.621439e-54 | -8.615850e-47 |
| Msa0487490 | Msa1102540 | 0.813804 | 2.125998e-51 | -8.615850e-47 |
| Msa0487490 | Msa1115830 | 0.823747 | 1.172778e-53 | -8.615850e-47 |
| Msa0487490 | Msa1118980 | 0.813305 | 2.737193e-51 | -8.615850e-47 |
| Msa0487490 | Msa1119860 | 0.814528 | 1.471612e-51 | -8.615850e-47 |
| Msa0487490 | Msa1120660 | 0.812335 | 4.465097e-51 | -8.615850e-47 |
| Msa0487490 | Msa1137940 | 0.808722 | 2.693891e-50 | -8.615850e-47 |
| Msa0487490 | Msa1144730 | 0.890066 | 1.378399e-73 | -8.615850e-47 |
| Msa0487490 | Msa1151820 | 0.803034 | 4.226906e-49 | -8.615850e-47 |
| Msa0487490 | Msa1157030 | 0.802905 | 4.492841e-49 | -8.615850e-47 |
| Msa0487490 | Msa1157730 | 0.806763 | 7.023702e-50 | -8.615850e-47 |
| Msa0487490 | Msa1162330 | 0.802446 | 5.588482e-49 | -8.615850e-47 |
| Msa0487490 | Msa1173380 | 0.848230 | 6.996755e-60 | -8.615850e-47 |
| Msa0487490 | Msa1177240 | 0.865821 | 4.470815e-65 | -8.615850e-47 |
| Msa0487490 | Msa1180050 | 0.800023 | 1.750791e-48 | -8.615850e-47 |
| Msa0487490 | Msa1182800 | 0.842391 | 2.661568e-58 | -8.615850e-47 |
| Msa0487490 | Msa1182830 | 0.834566 | 2.782697e-56 | -8.615850e-47 |
| Msa0487490 | Msa1184010 | 0.818610 | 1.792029e-52 | -8.615850e-47 |
| Msa0487490 | Msa1222030 | -0.809520 | 1.816768e-50 | -8.615850e-47 |
| Msa0487490 | Msa1226880 | 0.823633 | 1.246936e-53 | -8.615850e-47 |
| Msa0487490 | Msa1232270 | 0.811261 | 7.647760e-51 | -8.615850e-47 |
| Msa0487490 | Msa1264560 | 0.802672 | 5.019742e-49 | -8.615850e-47 |
| Msa0487490 | Msa1265820 | -0.801793 | 7.612618e-49 | -8.615850e-47 |
| Msa0487490 | Msa1281270 | 0.852226 | 5.304789e-61 | -8.615850e-47 |
| Msa0487490 | Msa1293050 | 0.828457 | 8.897781e-55 | -8.615850e-47 |
| Msa0487490 | Msa1317030 | 0.862669 | 4.301905e-64 | -8.615850e-47 |
| Msa0487490 | Msa1318180 | 0.815143 | 1.074915e-51 | -8.615850e-47 |
| Msa0487490 | Msa1320380 | 0.863811 | 1.907217e-64 | -8.615850e-47 |
| Msa0487490 | Msa1326000 | 0.801356 | 9.359232e-49 | -8.615850e-47 |
| Msa0487490 | Msa1326400 | 0.834085 | 3.674094e-56 | -8.615850e-47 |
| Msa0487490 | Msa1332140 | -0.812806 | 3.522183e-51 | -8.615850e-47 |
| Msa0487490 | Msa1335970 | -0.807821 | 4.191643e-50 | -8.615850e-47 |
| Msa0487490 | Msa1349810 | 0.852666 | 3.975724e-61 | -8.615850e-47 |
| Msa0487490 | Msa1354090 | 0.845099 | 5.016184e-59 | -8.615850e-47 |
| Msa0487490 | Msa1358340 | 0.850160 | 2.031371e-60 | -8.615850e-47 |
| Msa0487490 | Msa1359890 | 0.839342 | 1.678042e-57 | -8.615850e-47 |
| Msa0487490 | Msa1367620 | -0.800235 | 1.584746e-48 | -8.615850e-47 |
| Msa0487490 | Msa1376350 | 0.804291 | 2.318333e-49 | -8.615850e-47 |
| Msa0487490 | Msa1378470 | 0.811689 | 6.175666e-51 | -8.615850e-47 |
| Msa0487490 | Msa1380720 | 0.820040 | 8.459761e-53 | -8.615850e-47 |
| Msa0487490 | Msa1394900 | 0.851198 | 1.037713e-60 | -8.615850e-47 |
| Msa0487490 | Msa1395230 | -0.811216 | 7.822905e-51 | -8.615850e-47 |
| Msa0487490 | Msa1400700 | -0.806044 | 9.958747e-50 | -8.615850e-47 |
| Msa0487490 | Msa1404690 | 0.800045 | 1.732218e-48 | -8.615850e-47 |
| Msa0487490 | Msa1405380 | 0.802550 | 5.318762e-49 | -8.615850e-47 |
| Msa0487490 | Msa1406020 | 0.834682 | 2.602768e-56 | -8.615850e-47 |
| Msa0487490 | Msa1412520 | 0.819621 | 1.054917e-52 | -8.615850e-47 |
| Msa0487490 | Msa1418200 | 0.837426 | 5.233559e-57 | -8.615850e-47 |
| Msa0487490 | Msa1420520 | 0.812510 | 4.089476e-51 | -8.615850e-47 |
| Msa0487490 | Msa1423190 | 0.808047 | 3.752790e-50 | -8.615850e-47 |
| Msa0487490 | Msa1430760 | 0.800129 | 1.665455e-48 | -8.615850e-47 |
| Msa0487490 | Msa1434660 | 0.864373 | 1.274135e-64 | -8.615850e-47 |
| Msa0487490 | Msa1439070 | 0.823612 | 1.261216e-53 | -8.615850e-47 |
| Msa0487490 | Msa1439120 | 0.815128 | 1.083589e-51 | -8.615850e-47 |
| Msa0487490 | Msa1440220 | 0.808351 | 3.232130e-50 | -8.615850e-47 |
| Msa0487490 | Msa1443550 | 0.802964 | 4.369846e-49 | -8.615850e-47 |
| Msa0487490 | Msa1455660 | 0.813362 | 2.659750e-51 | -8.615850e-47 |
| Msa0487490 | Msa1459540 | 0.846148 | 2.605407e-59 | -8.615850e-47 |
| Msa0487490 | Msa1460310 | -0.827024 | 1.966102e-54 | -8.615850e-47 |
| Msa0487490 | Msa1462600 | 0.820466 | 6.756567e-53 | -8.615850e-47 |
| Msa0487490 | Msa1466350 | 0.814238 | 1.706008e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487490 | MtrunA17_Chr3g0077631 | 96.196 | 184 | 7 | 0 | 1 | 184 | 140 | 323 | 1.14e-130 | 369 |
| Msa0487490 | MtrunA17_Chr1g0178631 | 40.556 | 180 | 99 | 4 | 4 | 180 | 160 | 334 | 6.51e-38 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487490 | AT4G10000.1 | 72.928 | 181 | 49 | 0 | 1 | 181 | 149 | 329 | 1.13e-97 | 286 |
| Msa0487490 | AT4G10000.2 | 72.928 | 181 | 49 | 0 | 1 | 181 | 149 | 329 | 1.13e-97 | 286 |
| Msa0487490 | AT5G03880.1 | 43.575 | 179 | 97 | 3 | 4 | 181 | 164 | 339 | 8.04e-44 | 149 |
Find 61 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAAATTCTTACTTCTT+TGG | 0.175708 | 3_4:-6417781 | None:intergenic |
| TCCCGTACCCTTCTACAAAA+AGG | 0.249924 | 3_4:-6415457 | None:intergenic |
| TGACATTGTGGGAACGTTCT+AGG | 0.276954 | 3_4:+6417078 | Msa0487490:CDS |
| AAAGAACTGATTATTCAAAA+TGG | 0.284949 | 3_4:+6418422 | Msa0487490:three_prime_UTR |
| GAGAACAGCTCCAGCTTTCT+AGG | 0.290385 | 3_4:-6417113 | None:intergenic |
| AAGTTACTCTTGGATGCTTC+TGG | 0.294502 | 3_4:+6417756 | Msa0487490:CDS |
| GCAAAATTACGTTGTCTAGA+AGG | 0.342024 | 3_4:-6413380 | None:intergenic |
| CTGTGTCTTACAGAACCTTT+AGG | 0.352920 | 3_4:-6415938 | None:intergenic |
| GAATAGGTTTCGAACAAATA+AGG | 0.364256 | 3_4:-6418266 | None:intergenic |
| AAAATTTCGTTTGAAGAAAG+TGG | 0.378378 | 3_4:-6418308 | None:intergenic |
| TAGGTTTATCCTTGTCCTAA+AGG | 0.380454 | 3_4:+6415923 | Msa0487490:intron |
| CTATAAATTATCCGACGAAT+AGG | 0.383781 | 3_4:-6418282 | None:intergenic |
| AAATACTTGTTCGAGCGATA+TGG | 0.384640 | 3_4:+6416877 | Msa0487490:CDS |
| AGAGAGGTGGTCAGAGAAAC+TGG | 0.386180 | 3_4:+6415959 | Msa0487490:CDS |
| ACAACTTTAAATAGCCTTTG+TGG | 0.397151 | 3_4:-6418347 | None:intergenic |
| CTACCTGCTCGTAGAATTGT+TGG | 0.397799 | 3_4:-6417050 | None:intergenic |
| TTCCTCATTGATCAAAATAG+TGG | 0.408697 | 3_4:+6416637 | Msa0487490:CDS |
| TTACTTACTGCTTTCATACA+TGG | 0.414336 | 3_4:-6416665 | None:intergenic |
| TTGAAAGTGCATCGAGTAAA+GGG | 0.440724 | 3_4:+6415047 | Msa0487490:five_prime_UTR |
| CACAACACTGGATTTCAATC+TGG | 0.442131 | 3_4:+6418224 | Msa0487490:CDS |
| CCTTACATTCTTCAAAATGT+AGG | 0.449859 | 3_4:+6417714 | Msa0487490:CDS |
| AGAAGGGAGAAGTCCATCAT+TGG | 0.461743 | 3_4:+6416900 | Msa0487490:CDS |
| GCGTGAGGCATTATGCGAAT+TGG | 0.471814 | 3_4:+6417686 | Msa0487490:CDS |
| GACATTGTGGGAACGTTCTA+GGG | 0.479537 | 3_4:+6417079 | Msa0487490:CDS |
| ATTGAAAGTGCATCGAGTAA+AGG | 0.482082 | 3_4:+6415046 | Msa0487490:five_prime_UTR |
| CCATGCAAACCTTGATGTGC+TGG | 0.497874 | 3_4:-6415008 | None:intergenic |
| AGCTCCAGCTTTCTAGGAGG+AGG | 0.503068 | 3_4:-6417107 | None:intergenic |
| CTCTCTAAAAGTCCCAATGA+TGG | 0.508740 | 3_4:-6416913 | None:intergenic |
| CTTCCTTGGCCAGCACATCA+AGG | 0.515024 | 3_4:+6414999 | Msa0487490:five_prime_UTR |
| ATAGCTAGCAACATCTTCCT+TGG | 0.515786 | 3_4:+6414985 | Msa0487490:intron |
| GAAGGGAGAAGTCCATCATT+GGG | 0.519221 | 3_4:+6416901 | Msa0487490:CDS |
| CCAGCACATCAAGGTTTGCA+TGG | 0.519241 | 3_4:+6415008 | Msa0487490:five_prime_UTR |
| TACTTTGTTGATCACAACAC+TGG | 0.521271 | 3_4:+6418212 | Msa0487490:CDS |
| ACGACGAACGAAGTTACTCT+TGG | 0.522523 | 3_4:+6417746 | Msa0487490:CDS |
| ATTCTTCAAAATGTAGGAGA+AGG | 0.523180 | 3_4:+6417720 | Msa0487490:CDS |
| TGAACCTCCTCCTAGAAAGC+TGG | 0.527393 | 3_4:+6417103 | Msa0487490:CDS |
| GTGTTGTGATCAACAAAGTA+AGG | 0.529816 | 3_4:-6418209 | None:intergenic |
| TTGTTCGAGCGATATGGAGA+AGG | 0.531686 | 3_4:+6416883 | Msa0487490:CDS |
| CAGCACATCAAGGTTTGCAT+GGG | 0.532656 | 3_4:+6415009 | Msa0487490:five_prime_UTR |
| TTGCGCAGCACTATCTTCAC+TGG | 0.541182 | 3_4:+6417020 | Msa0487490:intron |
| ACAATTCTACGAGCAGGTAG+AGG | 0.551144 | 3_4:+6417053 | Msa0487490:CDS |
| AGGTAGAGGAATGACATTGT+GGG | 0.575168 | 3_4:+6417067 | Msa0487490:CDS |
| ATGCCAACAATTCTACGAGC+AGG | 0.576106 | 3_4:+6417047 | Msa0487490:CDS |
| TTTGTTCGAAACCTATTCGT+CGG | 0.576535 | 3_4:+6418271 | Msa0487490:CDS |
| CTTACAGAACCTTTAGGACA+AGG | 0.591800 | 3_4:-6415932 | None:intergenic |
| TGAACTAGATCTTTCTGTCG+AGG | 0.600096 | 3_4:+6415489 | Msa0487490:CDS |
| AAAAGCTGCAAACTAATAGG+AGG | 0.603920 | 3_4:-6415082 | None:intergenic |
| AGAAAGATCTAGTTCAGTCA+TGG | 0.609780 | 3_4:-6415482 | None:intergenic |
| GTTCTTTCAAATCACCACAA+AGG | 0.613186 | 3_4:+6418333 | Msa0487490:three_prime_UTR |
| TATGTGATGAACAAAATCAC+AGG | 0.614486 | 3_4:+6418375 | Msa0487490:three_prime_UTR |
| TGTTCGAGCGATATGGAGAA+GGG | 0.616808 | 3_4:+6416884 | Msa0487490:CDS |
| AAACCTTGATGTGCTGGCCA+AGG | 0.622161 | 3_4:-6415002 | None:intergenic |
| CAGGTAGAGGAATGACATTG+TGG | 0.629598 | 3_4:+6417066 | Msa0487490:CDS |
| GAATGCTCGTATTGTGCGTG+AGG | 0.629611 | 3_4:+6417671 | Msa0487490:intron |
| AACAGCTCCAGCTTTCTAGG+AGG | 0.635879 | 3_4:-6417110 | None:intergenic |
| GCAGCACTATCTTCACTGGA+TGG | 0.651360 | 3_4:+6417024 | Msa0487490:intron |
| TTCTGTAAGACACAGAGAGG+TGG | 0.659198 | 3_4:+6415946 | Msa0487490:CDS |
| GTTCTCCTATGAAAATAACC+CGG | 0.677731 | 3_4:+6417130 | Msa0487490:CDS |
| AGCACATCAAGGTTTGCATG+GGG | 0.694844 | 3_4:+6415010 | Msa0487490:five_prime_UTR |
| AGGTTCTGTAAGACACAGAG+AGG | 0.695163 | 3_4:+6415943 | Msa0487490:CDS |
| GAGGTGGTCAGAGAAACTGG+TGG | 0.779819 | 3_4:+6415962 | Msa0487490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAAATGTTAAATATATA+AGG | + | chr3_4:6413495-6413514 | Msa0487490:intron | 10.0% |
| !! | GTAAAATGTTAAATATATAA+GGG | + | chr3_4:6413496-6413515 | Msa0487490:intron | 10.0% |
| !!! | AAATGTTTTATAAAAACTAT+AGG | + | chr3_4:6414882-6414901 | Msa0487490:intron | 10.0% |
| !!! | TATATTTTCTCAAATTATTA+CGG | - | chr3_4:6415704-6415723 | None:intergenic | 10.0% |
| !!! | ACAAAATATTTTAAAAGATA+AGG | - | chr3_4:6416573-6416592 | None:intergenic | 10.0% |
| !! | ATTAGTTAAAATCATTAAAA+TGG | - | chr3_4:6416802-6416821 | None:intergenic | 10.0% |
| !! | AATTTCTTAGATTGTTAAAA+GGG | - | chr3_4:6413422-6413441 | None:intergenic | 15.0% |
| !! | AAATTTCTTAGATTGTTAAA+AGG | - | chr3_4:6413423-6413442 | None:intergenic | 15.0% |
| !!! | CTAAGAAATTTTATTTTGTA+AGG | + | chr3_4:6413432-6413451 | Msa0487490:intron | 15.0% |
| !! | TGTTGTTGTATATTAAAATA+TGG | + | chr3_4:6414175-6414194 | Msa0487490:intron | 15.0% |
| !! | CTTTAATTAAAATCGTAAAA+GGG | - | chr3_4:6414265-6414284 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTAAATACTATTT+TGG | + | chr3_4:6414280-6414299 | Msa0487490:intron | 15.0% |
| !! | AAAAGAAATAAATTAACTTC+TGG | - | chr3_4:6415219-6415238 | None:intergenic | 15.0% |
| !! | ATAGTATGAAAGATTTAAAA+AGG | - | chr3_4:6415419-6415438 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+GGG | - | chr3_4:6415703-6415722 | None:intergenic | 15.0% |
| !! | TTTGAGAAAATATAAGTAAT+TGG | + | chr3_4:6415710-6415729 | Msa0487490:intron | 15.0% |
| !!! | CAATAAAATTCTTTTGAAAT+TGG | - | chr3_4:6415813-6415832 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGAATGAAT+CGG | + | chr3_4:6417234-6417253 | Msa0487490:intron | 15.0% |
| !! | AATGTTAAATGATTTATGAT+TGG | + | chr3_4:6417262-6417281 | Msa0487490:intron | 15.0% |
| !! | AATAATTGTTGAATAATACT+TGG | + | chr3_4:6418082-6418101 | Msa0487490:intron | 15.0% |
| !!! | TTCTCATCTAATGATTTTAT+TGG | + | chr3_4:6413345-6413364 | Msa0487490:five_prime_UTR | 20.0% |
| !! | CCTTTAATTAAAATCGTAAA+AGG | - | chr3_4:6414266-6414285 | None:intergenic | 20.0% |
| !!! | CCTTTTACGATTTTAATTAA+AGG | + | chr3_4:6414263-6414282 | Msa0487490:intron | 20.0% |
| !! | TAGTATTAAAATGTATAGCT+GGG | - | chr3_4:6414365-6414384 | None:intergenic | 20.0% |
| !! | TTAGTATTAAAATGTATAGC+TGG | - | chr3_4:6414366-6414385 | None:intergenic | 20.0% |
| !!! | AATACTAAATTTTGATGATG+TGG | + | chr3_4:6414378-6414397 | Msa0487490:intron | 20.0% |
| !! | AAGTCTTAATAACTAGTTAT+TGG | + | chr3_4:6414704-6414723 | Msa0487490:intron | 20.0% |
| !!! | TATAGGAAGAATGAATTTTT+TGG | + | chr3_4:6414899-6414918 | Msa0487490:intron | 20.0% |
| !!! | GCAAATGTTTTAGAATATTT+TGG | - | chr3_4:6414925-6414944 | None:intergenic | 20.0% |
| !! | AAGAAGAATACAAAAAATGT+TGG | - | chr3_4:6415167-6415186 | None:intergenic | 20.0% |
| !!! | AAAAACAAAAGCTGTTTTTT+TGG | + | chr3_4:6416077-6416096 | Msa0487490:intron | 20.0% |
| !!! | AAAACAAAAGCTGTTTTTTT+GGG | + | chr3_4:6416078-6416097 | Msa0487490:intron | 20.0% |
| !! | AGAGATAAGAAAAAAGATAA+AGG | + | chr3_4:6416141-6416160 | Msa0487490:intron | 20.0% |
| !! | GAGATAAGAAAAAAGATAAA+GGG | + | chr3_4:6416142-6416161 | Msa0487490:intron | 20.0% |
| !! | CAATATAAGTAGAAAGAATA+AGG | - | chr3_4:6416706-6416725 | None:intergenic | 20.0% |
| !! | TTTCTACTTATATTGTTTAG+TGG | + | chr3_4:6416711-6416730 | Msa0487490:intron | 20.0% |
| !! | CAAATAAATTCTTACTTCTT+TGG | - | chr3_4:6417784-6417803 | None:intergenic | 20.0% |
| !! | TGGTTCAATTTCAATAAAAA+AGG | - | chr3_4:6418023-6418042 | None:intergenic | 20.0% |
| !!! | TTTAGTTCTTCTAAAATGAA+TGG | - | chr3_4:6418043-6418062 | None:intergenic | 20.0% |
| !! | CAACAATTATTAAACATAAC+TGG | - | chr3_4:6418073-6418092 | None:intergenic | 20.0% |
| !! | AAAGAACTGATTATTCAAAA+TGG | + | chr3_4:6418422-6418441 | Msa0487490:three_prime_UTR | 20.0% |
| !! | ATCTAATGATTTTATTGGCA+GGG | + | chr3_4:6413350-6413369 | Msa0487490:five_prime_UTR | 25.0% |
| !! | GAAATGTTTCTACAAATGAA+TGG | + | chr3_4:6413663-6413682 | Msa0487490:intron | 25.0% |
| ! | ATGAAGTATATGTTAAAACC+CGG | + | chr3_4:6413745-6413764 | Msa0487490:intron | 25.0% |
| ! | GAAGACATAGAAAAACTATT+TGG | + | chr3_4:6414044-6414063 | Msa0487490:intron | 25.0% |
| ! | TGTCTATCATAAACCATATT+TGG | - | chr3_4:6414097-6414116 | None:intergenic | 25.0% |
| ! | ATGGTTTATGATAGACATTA+TGG | + | chr3_4:6414100-6414119 | Msa0487490:intron | 25.0% |
| ! | AGAGAGGTTACAAAAAAATT+GGG | - | chr3_4:6414235-6414254 | None:intergenic | 25.0% |
| ! | AAGAGAGGTTACAAAAAAAT+TGG | - | chr3_4:6414236-6414255 | None:intergenic | 25.0% |
| !! | AGTCTATTTTGTATGGATTT+TGG | + | chr3_4:6414305-6414324 | Msa0487490:intron | 25.0% |
| ! | TAATGTATATCTCGATGAAA+TGG | - | chr3_4:6414483-6414502 | None:intergenic | 25.0% |
| ! | ATATCAATAGCACTACAAAA+GGG | - | chr3_4:6414766-6414785 | None:intergenic | 25.0% |
| ! | AATATCAATAGCACTACAAA+AGG | - | chr3_4:6414767-6414786 | None:intergenic | 25.0% |
| !! | TTTTTCTGAATATGAACTAC+TGG | + | chr3_4:6414787-6414806 | Msa0487490:intron | 25.0% |
| !! | GAGAATCTTAGTTTGAATAA+AGG | - | chr3_4:6415325-6415344 | None:intergenic | 25.0% |
| ! | GTTTCATACTTAATAGCATA+AGG | - | chr3_4:6415635-6415654 | None:intergenic | 25.0% |
| !! | AATGATTTATGGTTGACTTA+TGG | + | chr3_4:6415860-6415879 | Msa0487490:intron | 25.0% |
| ! | ACCAACAGTAGTAATATTAA+GGG | - | chr3_4:6415895-6415914 | None:intergenic | 25.0% |
| !!! | AAACAAAAGCTGTTTTTTTG+GGG | + | chr3_4:6416079-6416098 | Msa0487490:intron | 25.0% |
| !!! | TATCTTTTTTCTTATCTCTC+TGG | - | chr3_4:6416140-6416159 | None:intergenic | 25.0% |
| !!! | ATTCCATCACAAAGTATTTT+TGG | - | chr3_4:6416209-6416228 | None:intergenic | 25.0% |
| !! | AAAAATACTTTGTGATGGAA+TGG | + | chr3_4:6416208-6416227 | Msa0487490:intron | 25.0% |
| ! | TGGATTTAAATGGAATAGAA+CGG | + | chr3_4:6416233-6416252 | Msa0487490:intron | 25.0% |
| !!! | TAGTTAGAATGGCTATTTTT+GGG | - | chr3_4:6416375-6416394 | None:intergenic | 25.0% |
| !!! | TTAGTTAGAATGGCTATTTT+TGG | - | chr3_4:6416376-6416395 | None:intergenic | 25.0% |
| ! | ATTCTAACTAACTATTCTCA+GGG | + | chr3_4:6416385-6416404 | Msa0487490:intron | 25.0% |
| !! | ATTTTCAACATACTCATTCT+TGG | + | chr3_4:6416534-6416553 | Msa0487490:intron | 25.0% |
| ! | GTAAACAACTATGAAAATGA+AGG | - | chr3_4:6416752-6416771 | None:intergenic | 25.0% |
| ! | TTCATAGTTGTTTACTAGTT+CGG | + | chr3_4:6416757-6416776 | Msa0487490:intron | 25.0% |
| ! | ATTAAAATGGACCATTAAGA+AGG | - | chr3_4:6416789-6416808 | None:intergenic | 25.0% |
| !!! | TAGAGAGGTATACATATTTT+AGG | + | chr3_4:6416929-6416948 | Msa0487490:intron | 25.0% |
| !!! | AGAGAGGTATACATATTTTA+GGG | + | chr3_4:6416930-6416949 | Msa0487490:intron | 25.0% |
| ! | ATAGAAGAACATTATCTTAC+CGG | - | chr3_4:6417152-6417171 | None:intergenic | 25.0% |
| ! | TTGAGTGTAAAAATCACATT+TGG | + | chr3_4:6417313-6417332 | Msa0487490:intron | 25.0% |
| !!! | ATGCATTTGATTTGTAACAA+TGG | + | chr3_4:6417505-6417524 | Msa0487490:intron | 25.0% |
| !!! | TGCATTTGATTTGTAACAAT+GGG | + | chr3_4:6417506-6417525 | Msa0487490:intron | 25.0% |
| !!! | AAGATTTGCTATAATTGTCA+TGG | + | chr3_4:6417547-6417566 | Msa0487490:intron | 25.0% |
| !! | TTAAGATAGTTGATTCTACT+CGG | - | chr3_4:6417585-6417604 | None:intergenic | 25.0% |
| !!! | TTAATTTCTCGCTTTGTTTT+GGG | + | chr3_4:6417601-6417620 | Msa0487490:intron | 25.0% |
| !!! | TTTTGCTTATTTTCCAAAGT+TGG | + | chr3_4:6417834-6417853 | Msa0487490:intron | 25.0% |
| !!! | AAATTCTGGATTTTTTTTGC+CGG | + | chr3_4:6417857-6417876 | Msa0487490:intron | 25.0% |
| ! | TGATTTATAAGAGAATGAAG+TGG | - | chr3_4:6417983-6418002 | None:intergenic | 25.0% |
| ! | AAAATTTCGTTTGAAGAAAG+TGG | - | chr3_4:6418311-6418330 | None:intergenic | 25.0% |
| ! | CATCTAATGATTTTATTGGC+AGG | + | chr3_4:6413349-6413368 | Msa0487490:five_prime_UTR | 30.0% |
| ! | TAGACAACGTAATTTTGCTT+TGG | + | chr3_4:6413385-6413404 | Msa0487490:five_prime_UTR | 30.0% |
| ! | ACATAATGCCTTAAGGTTTT+AGG | + | chr3_4:6413531-6413550 | Msa0487490:intron | 30.0% |
| AGATGGTAGAAAATAGTCTT+AGG | + | chr3_4:6413933-6413952 | Msa0487490:intron | 30.0% | |
| TTGTAGTAAAGAGAGTAGAT+CGG | + | chr3_4:6413990-6414009 | Msa0487490:intron | 30.0% | |
| TAATGAGTTCGATCCAAATA+TGG | + | chr3_4:6414081-6414100 | Msa0487490:intron | 30.0% | |
| ! | AAGCTTTATCCTACTAAGTT+GGG | - | chr3_4:6414149-6414168 | None:intergenic | 30.0% |
| !!! | TTTGGAAGGGTTTTTTAAGA+GGG | - | chr3_4:6414207-6414226 | None:intergenic | 30.0% |
| GAGAGGTTACAAAAAAATTG+GGG | - | chr3_4:6414234-6414253 | None:intergenic | 30.0% | |
| ! | TTTGGTCAGTCTATTTTGTA+TGG | + | chr3_4:6414298-6414317 | Msa0487490:intron | 30.0% |
| ! | TTTTCTCCAACTATGCATTT+AGG | - | chr3_4:6414612-6414631 | None:intergenic | 30.0% |
| AAAGAACAAAATCGTGAATG+AGG | + | chr3_4:6414653-6414672 | Msa0487490:intron | 30.0% | |
| AAGAACAAAATCGTGAATGA+GGG | + | chr3_4:6414654-6414673 | Msa0487490:intron | 30.0% | |
| AGTAGTACATGTGTTGTAAA+CGG | + | chr3_4:6414853-6414872 | Msa0487490:intron | 30.0% | |
| TCAAAAAGCTGCAAACTAAT+AGG | - | chr3_4:6415088-6415107 | None:intergenic | 30.0% | |
| ! | AGTTTGCAGCTTTTTGAATT+TGG | + | chr3_4:6415091-6415110 | Msa0487490:five_prime_UTR | 30.0% |
| TTCATACTATTTGTCAACAG+AGG | + | chr3_4:6415429-6415448 | Msa0487490:intron | 30.0% | |
| TAAATCATTTCTCAAGTCAC+AGG | - | chr3_4:6415849-6415868 | None:intergenic | 30.0% | |
| GTGACTTGAGAAATGATTTA+TGG | + | chr3_4:6415849-6415868 | Msa0487490:intron | 30.0% | |
| TCCCTTAATATTACTACTGT+TGG | + | chr3_4:6415891-6415910 | Msa0487490:intron | 30.0% | |
| CACCAACAGTAGTAATATTA+AGG | - | chr3_4:6415896-6415915 | None:intergenic | 30.0% | |
| !! | CTACTGTTGGTGTTATTAAT+AGG | + | chr3_4:6415904-6415923 | Msa0487490:intron | 30.0% |
| !!! | AACAAAAGCTGTTTTTTTGG+GGG | + | chr3_4:6416080-6416099 | Msa0487490:intron | 30.0% |
| CTTCCAAAAATACTTTGTGA+TGG | + | chr3_4:6416203-6416222 | Msa0487490:intron | 30.0% | |
| CTGAGAATAGTTAGTTAGAA+TGG | - | chr3_4:6416386-6416405 | None:intergenic | 30.0% | |
| CATTCTAACTAACTATTCTC+AGG | + | chr3_4:6416384-6416403 | Msa0487490:intron | 30.0% | |
| ! | CTATTGAAGTTGTTATTCCA+GGG | - | chr3_4:6416471-6416490 | None:intergenic | 30.0% |
| ! | CATAATGTTGTCCTTTTTGT+AGG | + | chr3_4:6416608-6416627 | Msa0487490:intron | 30.0% |
| !!! | CTATTTTGATCAATGAGGAA+AGG | - | chr3_4:6416637-6416656 | None:intergenic | 30.0% |
| TTCCTCATTGATCAAAATAG+TGG | + | chr3_4:6416637-6416656 | Msa0487490:CDS | 30.0% | |
| TTACTTACTGCTTTCATACA+TGG | - | chr3_4:6416668-6416687 | None:intergenic | 30.0% | |
| ATGAAAGCAGTAAGTAAGAA+AGG | + | chr3_4:6416671-6416690 | Msa0487490:intron | 30.0% | |
| ATGAAAATGAAGGTGGTTTA+TGG | - | chr3_4:6416742-6416761 | None:intergenic | 30.0% | |
| AACAACTATGAAAATGAAGG+TGG | - | chr3_4:6416749-6416768 | None:intergenic | 30.0% | |
| ! | AGAAAGTACACAACATTCAA+TGG | - | chr3_4:6416830-6416849 | None:intergenic | 30.0% |
| TTGAATGTTGTGTACTTTCT+TGG | + | chr3_4:6416830-6416849 | Msa0487490:intron | 30.0% | |
| TAGAAGAACATTATCTTACC+GGG | - | chr3_4:6417151-6417170 | None:intergenic | 30.0% | |
| GTTCTTCTATCTCCAATTTA+TGG | + | chr3_4:6417162-6417181 | Msa0487490:intron | 30.0% | |
| TTTGCATTTCCTCCATAAAT+TGG | - | chr3_4:6417177-6417196 | None:intergenic | 30.0% | |
| !!! | CTTTGTCTGTTTGGTTTTTT+TGG | + | chr3_4:6417208-6417227 | Msa0487490:intron | 30.0% |
| TATGTGTCTCAAATCACTTT+CGG | + | chr3_4:6417364-6417383 | Msa0487490:intron | 30.0% | |
| !! | TGAATGTGTTATTTCGATCA+AGG | - | chr3_4:6417468-6417487 | None:intergenic | 30.0% |
| !! | GCATTTGATTTGTAACAATG+GGG | + | chr3_4:6417507-6417526 | Msa0487490:intron | 30.0% |
| ! | TAACAATGGGGTTAGTATTT+AGG | + | chr3_4:6417519-6417538 | Msa0487490:intron | 30.0% |
| ! | TAAGATAGTTGATTCTACTC+GGG | - | chr3_4:6417584-6417603 | None:intergenic | 30.0% |
| !!! | CTTAATTTCTCGCTTTGTTT+TGG | + | chr3_4:6417600-6417619 | Msa0487490:intron | 30.0% |
| !!! | TAATTTCTCGCTTTGTTTTG+GGG | + | chr3_4:6417602-6417621 | Msa0487490:intron | 30.0% |
| !! | CCTACATTTTGAAGAATGTA+AGG | - | chr3_4:6417717-6417736 | None:intergenic | 30.0% |
| CCTTACATTCTTCAAAATGT+AGG | + | chr3_4:6417714-6417733 | Msa0487490:CDS | 30.0% | |
| ATTCTTCAAAATGTAGGAGA+AGG | + | chr3_4:6417720-6417739 | Msa0487490:CDS | 30.0% | |
| ! | TTTTCCAAAGTTGGAAATTC+TGG | + | chr3_4:6417843-6417862 | Msa0487490:intron | 30.0% |
| AAATCCAGAATTTCCAACTT+TGG | - | chr3_4:6417850-6417869 | None:intergenic | 30.0% | |
| ! | AGCGTTTTTCTGATATTTCT+TGG | + | chr3_4:6418125-6418144 | Msa0487490:intron | 30.0% |
| TCCTTACATGAATATGAAAG+TGG | + | chr3_4:6418173-6418192 | Msa0487490:intron | 30.0% | |
| ACCACTTTCATATTCATGTA+AGG | - | chr3_4:6418177-6418196 | None:intergenic | 30.0% | |
| GAATAGGTTTCGAACAAATA+AGG | - | chr3_4:6418269-6418288 | None:intergenic | 30.0% | |
| CTATAAATTATCCGACGAAT+AGG | - | chr3_4:6418285-6418304 | None:intergenic | 30.0% | |
| ACAACTTTAAATAGCCTTTG+TGG | - | chr3_4:6418350-6418369 | None:intergenic | 30.0% | |
| TATGTGATGAACAAAATCAC+AGG | + | chr3_4:6418375-6418394 | Msa0487490:three_prime_UTR | 30.0% | |
| ! | TAATGATTTTATTGGCAGGG+AGG | + | chr3_4:6413353-6413372 | Msa0487490:five_prime_UTR | 35.0% |
| GCAAAATTACGTTGTCTAGA+AGG | - | chr3_4:6413383-6413402 | None:intergenic | 35.0% | |
| ! | ACAACGTAATTTTGCTTTGG+AGG | + | chr3_4:6413388-6413407 | Msa0487490:five_prime_UTR | 35.0% |
| CTCGTATACATAATGCCTTA+AGG | + | chr3_4:6413524-6413543 | Msa0487490:intron | 35.0% | |
| !!! | AATGCCTTAAGGTTTTAGGT+CGG | + | chr3_4:6413535-6413554 | Msa0487490:intron | 35.0% |
| TGTTGTATGGAACAAAGTGT+TGG | + | chr3_4:6413771-6413790 | Msa0487490:intron | 35.0% | |
| CGCTTACTTTATTCTTGTGT+TGG | - | chr3_4:6413808-6413827 | None:intergenic | 35.0% | |
| CAAGAATAAAGTAAGCGTAG+CGG | + | chr3_4:6413811-6413830 | Msa0487490:intron | 35.0% | |
| ! | AGCAACTATAGTGGAAAAGA+TGG | + | chr3_4:6413916-6413935 | Msa0487490:intron | 35.0% |
| ! | TGGTAGAAAATAGTCTTAGG+TGG | + | chr3_4:6413936-6413955 | Msa0487490:intron | 35.0% |
| ! | GAAAATAGTCTTAGGTGGTT+TGG | + | chr3_4:6413941-6413960 | Msa0487490:intron | 35.0% |
| CTCTTTACTACAAAATCTGC+AGG | - | chr3_4:6413983-6414002 | None:intergenic | 35.0% | |
| ! | TTTATCCTACTAAGTTGGGT+TGG | - | chr3_4:6414145-6414164 | None:intergenic | 35.0% |
| ! | CAAGCTTTATCCTACTAAGT+TGG | - | chr3_4:6414150-6414169 | None:intergenic | 35.0% |
| CAACTTAGTAGGATAAAGCT+TGG | + | chr3_4:6414148-6414167 | Msa0487490:intron | 35.0% | |
| !!! | GTTTGGAAGGGTTTTTTAAG+AGG | - | chr3_4:6414208-6414227 | None:intergenic | 35.0% |
| GGTTACAAAAAAATTGGGGT+CGG | - | chr3_4:6414230-6414249 | None:intergenic | 35.0% | |
| !!! | TTGTATGGATTTTGGTTCCT+CGG | + | chr3_4:6414313-6414332 | Msa0487490:intron | 35.0% |
| !! | TTGATGATGTGACATTGTCT+AGG | + | chr3_4:6414432-6414451 | Msa0487490:intron | 35.0% |
| AAGAGGTTTAGTCAGTTACA+CGG | - | chr3_4:6414953-6414972 | None:intergenic | 35.0% | |
| GCTATCATCAAAACTCAAAG+AGG | - | chr3_4:6414970-6414989 | None:intergenic | 35.0% | |
| ! | ATTGAAAGTGCATCGAGTAA+AGG | + | chr3_4:6415046-6415065 | Msa0487490:five_prime_UTR | 35.0% |
| ! | TTGAAAGTGCATCGAGTAAA+GGG | + | chr3_4:6415047-6415066 | Msa0487490:five_prime_UTR | 35.0% |
| AAAAGCTGCAAACTAATAGG+AGG | - | chr3_4:6415085-6415104 | None:intergenic | 35.0% | |
| TATTAGCAATAGCATCACCA+AGG | - | chr3_4:6415139-6415158 | None:intergenic | 35.0% | |
| GTGATGCTATTGCTAATAAC+AGG | + | chr3_4:6415141-6415160 | Msa0487490:intron | 35.0% | |
| !! | TTCTTTTTAGTGCAAGCATC+AGG | + | chr3_4:6415232-6415251 | Msa0487490:intron | 35.0% |
| ! | AGAAAGATCTAGTTCAGTCA+TGG | - | chr3_4:6415485-6415504 | None:intergenic | 35.0% |
| TTGTGTATACGATGAATCTG+CGG | - | chr3_4:6415519-6415538 | None:intergenic | 35.0% | |
| ATGAAACACTGACAAAGACA+TGG | + | chr3_4:6415648-6415667 | Msa0487490:intron | 35.0% | |
| TAGGTTTATCCTTGTCCTAA+AGG | + | chr3_4:6415923-6415942 | Msa0487490:intron | 35.0% | |
| !!! | TTTTTTTGGGGGTATCTGTT+AGG | + | chr3_4:6416091-6416110 | Msa0487490:intron | 35.0% |
| ! | TGGAATGGAGTGGATTTAAA+TGG | + | chr3_4:6416223-6416242 | Msa0487490:intron | 35.0% |
| !! | TTTTGGGTGGTTAGTGTTAA+AGG | - | chr3_4:6416359-6416378 | None:intergenic | 35.0% |
| !!! | TTAGAATGGCTATTTTTGGG+TGG | - | chr3_4:6416372-6416391 | None:intergenic | 35.0% |
| !! | TTTTATATGCTGATTGACCC+TGG | + | chr3_4:6416451-6416470 | Msa0487490:intron | 35.0% |
| ! | CCTATTGAAGTTGTTATTCC+AGG | - | chr3_4:6416472-6416491 | None:intergenic | 35.0% |
| CCTGGAATAACAACTTCAAT+AGG | + | chr3_4:6416469-6416488 | Msa0487490:intron | 35.0% | |
| AGGAAAGGAAACCTACAAAA+AGG | - | chr3_4:6416622-6416641 | None:intergenic | 35.0% | |
| !!! | CACCACTATTTTGATCAATG+AGG | - | chr3_4:6416642-6416661 | None:intergenic | 35.0% |
| !! | TTCGGATTAGTCCTTCTTAA+TGG | + | chr3_4:6416775-6416794 | Msa0487490:intron | 35.0% |
| ! | CTTTCTTGGTTTCTTGTTGT+AGG | + | chr3_4:6416844-6416863 | Msa0487490:intron | 35.0% |
| AAATACTTGTTCGAGCGATA+TGG | + | chr3_4:6416877-6416896 | Msa0487490:CDS | 35.0% | |
| !! | GAGGTATACATATTTTAGGG+AGG | + | chr3_4:6416933-6416952 | Msa0487490:intron | 35.0% |
| GTTCTCCTATGAAAATAACC+CGG | + | chr3_4:6417130-6417149 | Msa0487490:CDS | 35.0% | |
| !! | TCTTACCGGGTTATTTTCAT+AGG | - | chr3_4:6417138-6417157 | None:intergenic | 35.0% |
| CTTCTATCTCCAATTTATGG+AGG | + | chr3_4:6417165-6417184 | Msa0487490:intron | 35.0% | |
| TTTGTCTATGTTCTCAACCT+TGG | + | chr3_4:6417416-6417435 | Msa0487490:intron | 35.0% | |
| TTGTCTATGTTCTCAACCTT+GGG | + | chr3_4:6417417-6417436 | Msa0487490:intron | 35.0% | |
| AAGGAATGATAAAGAACCCA+AGG | - | chr3_4:6417436-6417455 | None:intergenic | 35.0% | |
| TCGATCAAGGTTCAATTGAA+AGG | - | chr3_4:6417455-6417474 | None:intergenic | 35.0% | |
| GTACAAATGTAGTGATATGC+CGG | - | chr3_4:6417879-6417898 | None:intergenic | 35.0% | |
| ! | GAATGAAGTGGATTTCAACA+AGG | - | chr3_4:6417971-6417990 | None:intergenic | 35.0% |
| AGAAAAACGCTAGCAAGATA+CGG | - | chr3_4:6418116-6418135 | None:intergenic | 35.0% | |
| GTGTTGTGATCAACAAAGTA+AGG | - | chr3_4:6418212-6418231 | None:intergenic | 35.0% | |
| TACTTTGTTGATCACAACAC+TGG | + | chr3_4:6418212-6418231 | Msa0487490:CDS | 35.0% | |
| TTTGTTCGAAACCTATTCGT+CGG | + | chr3_4:6418271-6418290 | Msa0487490:CDS | 35.0% | |
| GTTCTTTCAAATCACCACAA+AGG | + | chr3_4:6418333-6418352 | Msa0487490:three_prime_UTR | 35.0% | |
| TTGTAAGGCTCTCTTTGCTT+TGG | + | chr3_4:6413447-6413466 | Msa0487490:intron | 40.0% | |
| CATTCCGACCTAAAACCTTA+AGG | - | chr3_4:6413542-6413561 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTAGGTCGGAATG+TGG | + | chr3_4:6413542-6413561 | Msa0487490:intron | 40.0% |
| TTTGTTCCATACAACATCGC+CGG | - | chr3_4:6413767-6413786 | None:intergenic | 40.0% | |
| !! | GTATGGAACAAAGTGTTGGA+CGG | + | chr3_4:6413775-6413794 | Msa0487490:intron | 40.0% |
| CGGAGATTAGGATGTTATGT+TGG | + | chr3_4:6413831-6413850 | Msa0487490:intron | 40.0% | |
| AGGATGTTATGTTGGATGTG+TGG | + | chr3_4:6413839-6413858 | Msa0487490:intron | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | + | chr3_4:6413858-6413877 | Msa0487490:intron | 40.0% | |
| GATGACATTAGAGAGAGAGT+TGG | + | chr3_4:6413890-6413909 | Msa0487490:intron | 40.0% | |
| AGTTGGAGTAGCAACTATAG+TGG | + | chr3_4:6413907-6413926 | Msa0487490:intron | 40.0% | |
| AGTAAAGAGAGTAGATCGGA+TGG | + | chr3_4:6413994-6414013 | Msa0487490:intron | 40.0% | |
| GAGGATAGTCAGATTACAAG+AGG | + | chr3_4:6414016-6414035 | Msa0487490:intron | 40.0% | |
| AGTCAGATTACAAGAGGTAG+AGG | + | chr3_4:6414022-6414041 | Msa0487490:intron | 40.0% | |
| CAAAAAAATTGGGGTCGGTT+TGG | - | chr3_4:6414225-6414244 | None:intergenic | 40.0% | |
| GTAAAAGGGCAAAACAAGAG+AGG | - | chr3_4:6414251-6414270 | None:intergenic | 40.0% | |
| !!! | TGTATGGATTTTGGTTCCTC+GGG | + | chr3_4:6414314-6414333 | Msa0487490:intron | 40.0% |
| AAGACACTCTCTAGTTGCTT+AGG | + | chr3_4:6414535-6414554 | Msa0487490:intron | 40.0% | |
| !!! | AGGACTGGTTTTCTATGATG+TGG | - | chr3_4:6414592-6414611 | None:intergenic | 40.0% |
| ACCAGTCCTAAATGCATAGT+TGG | + | chr3_4:6414603-6414622 | Msa0487490:intron | 40.0% | |
| ! | TCCAACTATGCATTTAGGAC+TGG | - | chr3_4:6414607-6414626 | None:intergenic | 40.0% |
| ATAGCACTACAAAAGGGCTA+TGG | - | chr3_4:6414760-6414779 | None:intergenic | 40.0% | |
| ATAGCTAGCAACATCTTCCT+TGG | + | chr3_4:6414985-6415004 | Msa0487490:intron | 40.0% | |
| ! | TTTTGCTACCGAAGAATCCT+TGG | + | chr3_4:6415119-6415138 | Msa0487490:intron | 40.0% |
| TAGCATCACCAAGGATTCTT+CGG | - | chr3_4:6415130-6415149 | None:intergenic | 40.0% | |
| TGAACTAGATCTTTCTGTCG+AGG | + | chr3_4:6415489-6415508 | Msa0487490:CDS | 40.0% | |
| !! | ATTGAAGGCGTTTCAAGTGT+CGG | - | chr3_4:6415769-6415788 | None:intergenic | 40.0% |
| !! | CTTACAGAACCTTTAGGACA+AGG | - | chr3_4:6415935-6415954 | None:intergenic | 40.0% |
| CTGTGTCTTACAGAACCTTT+AGG | - | chr3_4:6415941-6415960 | None:intergenic | 40.0% | |
| ! | TACTTTGTGATGGAATGGAG+TGG | + | chr3_4:6416213-6416232 | Msa0487490:intron | 40.0% |
| ACGGAGTTATCACTCTATGA+TGG | + | chr3_4:6416252-6416271 | Msa0487490:intron | 40.0% | |
| ! | GGATTTTATGACAACTTCCC+TGG | + | chr3_4:6416297-6416316 | Msa0487490:intron | 40.0% |
| CAACATTCACAAATTGGCCA+GGG | - | chr3_4:6416317-6416336 | None:intergenic | 40.0% | |
| TGCAGCCAACATTCACAAAT+TGG | - | chr3_4:6416323-6416342 | None:intergenic | 40.0% | |
| ! | CTCTCTAAAAGTCCCAATGA+TGG | - | chr3_4:6416916-6416935 | None:intergenic | 40.0% |
| !! | CATCATTGGGACTTTTAGAG+AGG | + | chr3_4:6416914-6416933 | Msa0487490:CDS | 40.0% |
| CGCAAGAGTGAGTTATTATG+AGG | - | chr3_4:6417005-6417024 | None:intergenic | 40.0% | |
| AGGTAGAGGAATGACATTGT+GGG | + | chr3_4:6417067-6417086 | Msa0487490:CDS | 40.0% | |
| GAGGAAATGCAAACATGTAG+AGG | + | chr3_4:6417184-6417203 | Msa0487490:intron | 40.0% | |
| TGTAGAGGACTTTGTCTGTT+TGG | + | chr3_4:6417199-6417218 | Msa0487490:intron | 40.0% | |
| ! | AAAGTGTGCGTTTGGTTTCA+CGG | - | chr3_4:6417399-6417418 | None:intergenic | 40.0% |
| ACATAGACAAAGTGTGCGTT+TGG | - | chr3_4:6417407-6417426 | None:intergenic | 40.0% | |
| AAGTTACTCTTGGATGCTTC+TGG | + | chr3_4:6417756-6417775 | Msa0487490:CDS | 40.0% | |
| CACTACATTTGTACCGTACT+AGG | + | chr3_4:6417885-6417904 | Msa0487490:intron | 40.0% | |
| AGCCAAATCATCCTTGAGAA+GGG | - | chr3_4:6417913-6417932 | None:intergenic | 40.0% | |
| AAGCCAAATCATCCTTGAGA+AGG | - | chr3_4:6417914-6417933 | None:intergenic | 40.0% | |
| ATATGAAAGTGGTTCTCTGC+AGG | + | chr3_4:6418184-6418203 | Msa0487490:intron | 40.0% | |
| CACAACACTGGATTTCAATC+TGG | + | chr3_4:6418224-6418243 | Msa0487490:CDS | 40.0% | |
| TAAAAACAGGCCAATGCTCC+TGG | - | chr3_4:6413577-6413596 | None:intergenic | 45.0% | |
| AAACCTGCTCCCAAACTGTT+GGG | - | chr3_4:6413621-6413640 | None:intergenic | 45.0% | |
| TAAACCTGCTCCCAAACTGT+TGG | - | chr3_4:6413622-6413641 | None:intergenic | 45.0% | |
| AGTTTGGGAGCAGGTTTAAG+AGG | + | chr3_4:6413624-6413643 | Msa0487490:intron | 45.0% | |
| GTTTGGGAGCAGGTTTAAGA+GGG | + | chr3_4:6413625-6413644 | Msa0487490:intron | 45.0% | |
| TTTGGGAGCAGGTTTAAGAG+GGG | + | chr3_4:6413626-6413645 | Msa0487490:intron | 45.0% | |
| TAAAACCCGGCGATGTTGTA+TGG | + | chr3_4:6413758-6413777 | Msa0487490:intron | 45.0% | |
| TTGTTCCATACAACATCGCC+GGG | - | chr3_4:6413766-6413785 | None:intergenic | 45.0% | |
| ! | AAGTAAGCGTAGCGGAGATT+AGG | + | chr3_4:6413819-6413838 | Msa0487490:intron | 45.0% |
| !! | TCTTAGGTGGTTTGGTCATG+TGG | + | chr3_4:6413949-6413968 | Msa0487490:intron | 45.0% |
| AAAGAGAGTAGATCGGATGG+AGG | + | chr3_4:6413997-6414016 | Msa0487490:intron | 45.0% | |
| TGTAGCCAACCCAACTTAGT+AGG | + | chr3_4:6414137-6414156 | Msa0487490:intron | 45.0% | |
| !! | AAATTGGGGTCGGTTTGGAA+GGG | - | chr3_4:6414220-6414239 | None:intergenic | 45.0% |
| !! | AAAATTGGGGTCGGTTTGGA+AGG | - | chr3_4:6414221-6414240 | None:intergenic | 45.0% |
| ACACTCTCTAGTTGCTTAGG+TGG | + | chr3_4:6414538-6414557 | Msa0487490:intron | 45.0% | |
| CAGCACATCAAGGTTTGCAT+GGG | + | chr3_4:6415009-6415028 | Msa0487490:five_prime_UTR | 45.0% | |
| AGCACATCAAGGTTTGCATG+GGG | + | chr3_4:6415010-6415029 | Msa0487490:five_prime_UTR | 45.0% | |
| TTTAGTGCAAGCATCAGGCT+TGG | + | chr3_4:6415237-6415256 | Msa0487490:intron | 45.0% | |
| ! | AGGCATGCCCTTTTTGTAGA+AGG | + | chr3_4:6415449-6415468 | Msa0487490:five_prime_UTR | 45.0% |
| ! | GGCATGCCCTTTTTGTAGAA+GGG | + | chr3_4:6415450-6415469 | Msa0487490:five_prime_UTR | 45.0% |
| ! | GCCCTTTTTGTAGAAGGGTA+CGG | + | chr3_4:6415455-6415474 | Msa0487490:five_prime_UTR | 45.0% |
| CCCGTACCCTTCTACAAAAA+GGG | - | chr3_4:6415459-6415478 | None:intergenic | 45.0% | |
| !! | CCCTTTTTGTAGAAGGGTAC+GGG | + | chr3_4:6415456-6415475 | Msa0487490:five_prime_UTR | 45.0% |
| TCCCGTACCCTTCTACAAAA+AGG | - | chr3_4:6415460-6415479 | None:intergenic | 45.0% | |
| !! | TTTTTGTAGAAGGGTACGGG+AGG | + | chr3_4:6415459-6415478 | Msa0487490:five_prime_UTR | 45.0% |
| ! | ACGCCTTCAATCTGAAGTGT+TGG | + | chr3_4:6415778-6415797 | Msa0487490:intron | 45.0% |
| GCACCAACACTTCAGATTGA+AGG | - | chr3_4:6415784-6415803 | None:intergenic | 45.0% | |
| AGGTTCTGTAAGACACAGAG+AGG | + | chr3_4:6415943-6415962 | Msa0487490:CDS | 45.0% | |
| TTCTGTAAGACACAGAGAGG+TGG | + | chr3_4:6415946-6415965 | Msa0487490:CDS | 45.0% | |
| ! | ATCACTCTATGATGGTGCCA+TGG | + | chr3_4:6416260-6416279 | Msa0487490:intron | 45.0% |
| CCAACATTCACAAATTGGCC+AGG | - | chr3_4:6416318-6416337 | None:intergenic | 45.0% | |
| CCTGGCCAATTTGTGAATGT+TGG | + | chr3_4:6416315-6416334 | Msa0487490:intron | 45.0% | |
| TTGTTCGAGCGATATGGAGA+AGG | + | chr3_4:6416883-6416902 | Msa0487490:CDS | 45.0% | |
| TGTTCGAGCGATATGGAGAA+GGG | + | chr3_4:6416884-6416903 | Msa0487490:CDS | 45.0% | |
| AGAAGGGAGAAGTCCATCAT+TGG | + | chr3_4:6416900-6416919 | Msa0487490:CDS | 45.0% | |
| GAAGGGAGAAGTCCATCATT+GGG | + | chr3_4:6416901-6416920 | Msa0487490:CDS | 45.0% | |
| ATGCCAACAATTCTACGAGC+AGG | + | chr3_4:6417047-6417066 | Msa0487490:CDS | 45.0% | |
| CTACCTGCTCGTAGAATTGT+TGG | - | chr3_4:6417053-6417072 | None:intergenic | 45.0% | |
| ACAATTCTACGAGCAGGTAG+AGG | + | chr3_4:6417053-6417072 | Msa0487490:CDS | 45.0% | |
| CAGGTAGAGGAATGACATTG+TGG | + | chr3_4:6417066-6417085 | Msa0487490:CDS | 45.0% | |
| TGACATTGTGGGAACGTTCT+AGG | + | chr3_4:6417078-6417097 | Msa0487490:CDS | 45.0% | |
| GACATTGTGGGAACGTTCTA+GGG | + | chr3_4:6417079-6417098 | Msa0487490:CDS | 45.0% | |
| ! | TAGTTGATTCTACTCGGGCA+CGG | - | chr3_4:6417579-6417598 | None:intergenic | 45.0% |
| ACGACGAACGAAGTTACTCT+TGG | + | chr3_4:6417746-6417765 | Msa0487490:CDS | 45.0% | |
| CACCCTTCTCAAGGATGATT+TGG | + | chr3_4:6417908-6417927 | Msa0487490:intron | 45.0% | |
| AGGCGAGCAGGAGTAAAAAC+AGG | - | chr3_4:6413590-6413609 | None:intergenic | 50.0% | |
| ! | TTTTTACTCCTGCTCGCCTG+CGG | + | chr3_4:6413591-6413610 | Msa0487490:intron | 50.0% |
| TGCGGATTCCCCAACAGTTT+GGG | + | chr3_4:6413609-6413628 | Msa0487490:intron | 50.0% | |
| AACCTGCTCCCAAACTGTTG+GGG | - | chr3_4:6413620-6413639 | None:intergenic | 50.0% | |
| TTGGGAGCAGGTTTAAGAGG+GGG | + | chr3_4:6413627-6413646 | Msa0487490:intron | 50.0% | |
| ! | AAACCTTGATGTGCTGGCCA+AGG | - | chr3_4:6415005-6415024 | None:intergenic | 50.0% |
| CCATGCAAACCTTGATGTGC+TGG | - | chr3_4:6415011-6415030 | None:intergenic | 50.0% | |
| CCAGCACATCAAGGTTTGCA+TGG | + | chr3_4:6415008-6415027 | Msa0487490:five_prime_UTR | 50.0% | |
| CACATGTGTCAGTGTCGTGT+CGG | + | chr3_4:6415740-6415759 | Msa0487490:intron | 50.0% | |
| AGAGAGGTGGTCAGAGAAAC+TGG | + | chr3_4:6415959-6415978 | Msa0487490:CDS | 50.0% | |
| ! | GGTGCCATGGTAGATTACAG+TGG | + | chr3_4:6416273-6416292 | Msa0487490:intron | 50.0% |
| GCCATGGTAGATTACAGTGG+CGG | + | chr3_4:6416276-6416295 | Msa0487490:intron | 50.0% | |
| TCCGCCACTGTAATCTACCA+TGG | - | chr3_4:6416280-6416299 | None:intergenic | 50.0% | |
| TTGCGCAGCACTATCTTCAC+TGG | + | chr3_4:6417020-6417039 | Msa0487490:intron | 50.0% | |
| GCAGCACTATCTTCACTGGA+TGG | + | chr3_4:6417024-6417043 | Msa0487490:intron | 50.0% | |
| TGAACCTCCTCCTAGAAAGC+TGG | + | chr3_4:6417103-6417122 | Msa0487490:CDS | 50.0% | |
| AACAGCTCCAGCTTTCTAGG+AGG | - | chr3_4:6417113-6417132 | None:intergenic | 50.0% | |
| GAGAACAGCTCCAGCTTTCT+AGG | - | chr3_4:6417116-6417135 | None:intergenic | 50.0% | |
| ! | GTGCGTTTGGTTTCACGGTA+GGG | - | chr3_4:6417394-6417413 | None:intergenic | 50.0% |
| ! | TGTGCGTTTGGTTTCACGGT+AGG | - | chr3_4:6417395-6417414 | None:intergenic | 50.0% |
| ! | AGTTGATTCTACTCGGGCAC+GGG | - | chr3_4:6417578-6417597 | None:intergenic | 50.0% |
| GAATGCTCGTATTGTGCGTG+AGG | + | chr3_4:6417671-6417690 | Msa0487490:intron | 50.0% | |
| ! | GCGTGAGGCATTATGCGAAT+TGG | + | chr3_4:6417686-6417705 | Msa0487490:CDS | 50.0% |
| !! | CTTGAGAAGGGTGCCTAGTA+CGG | - | chr3_4:6417901-6417920 | None:intergenic | 50.0% |
| AACAGGCCAATGCTCCTGGA+TGG | - | chr3_4:6413573-6413592 | None:intergenic | 55.0% | |
| CAAACTGTTGGGGAATCCGC+AGG | - | chr3_4:6413610-6413629 | None:intergenic | 55.0% | |
| CTGCGGATTCCCCAACAGTT+TGG | + | chr3_4:6413608-6413627 | Msa0487490:intron | 55.0% | |
| TTCCCCAACAGTTTGGGAGC+AGG | + | chr3_4:6413615-6413634 | Msa0487490:intron | 55.0% | |
| GAGCAGGTTTAAGAGGGGGA+GGG | + | chr3_4:6413631-6413650 | Msa0487490:intron | 55.0% | |
| AGCAGGTTTAAGAGGGGGAG+GGG | + | chr3_4:6413632-6413651 | Msa0487490:intron | 55.0% | |
| ! | GTCAGACAGTTTGAGACCCG+AGG | - | chr3_4:6414333-6414352 | None:intergenic | 55.0% |
| CTTCCTTGGCCAGCACATCA+AGG | + | chr3_4:6414999-6415018 | Msa0487490:five_prime_UTR | 55.0% | |
| CGACACGACACTGACACATG+TGG | - | chr3_4:6415742-6415761 | None:intergenic | 55.0% | |
| GAGGTGGTCAGAGAAACTGG+TGG | + | chr3_4:6415962-6415981 | Msa0487490:CDS | 55.0% | |
| ! | AGCTCCAGCTTTCTAGGAGG+AGG | - | chr3_4:6417110-6417129 | None:intergenic | 55.0% |
| CGTACTAGGCACCCTTCTCA+AGG | + | chr3_4:6417899-6417918 | Msa0487490:intron | 55.0% | |
| GGAATGTGGCGTCTCCATCC+AGG | + | chr3_4:6413556-6413575 | Msa0487490:intron | 60.0% | |
| ! | GCGTCTCCATCCAGGAGCAT+TGG | + | chr3_4:6413564-6413583 | Msa0487490:intron | 60.0% |
| GGAGCAGGTTTAAGAGGGGG+AGG | + | chr3_4:6413630-6413649 | Msa0487490:intron | 60.0% | |
| AGGTTTAAGAGGGGGAGGGG+AGG | + | chr3_4:6413635-6413654 | Msa0487490:intron | 60.0% | |
| GGTTTAAGAGGGGGAGGGGA+GGG | + | chr3_4:6413636-6413655 | Msa0487490:intron | 60.0% | |
| TGGGGAATCCGCAGGCGAGC+AGG | - | chr3_4:6413602-6413621 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 6413295 | 6418479 | 6413295 | ID=Msa0487490;Name=Msa0487490 |
| chr3_4 | mRNA | 6413295 | 6418479 | 6413295 | ID=Msa0487490-mRNA-1;Parent=Msa0487490;Name=Msa0487490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=274|1|1|1|0.87|1|9|175|184 |
| chr3_4 | exon | 6413295 | 6413409 | 6413295 | ID=Msa0487490-mRNA-1:exon:2251;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6414989 | 6415112 | 6414989 | ID=Msa0487490-mRNA-1:exon:2252;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6415449 | 6415510 | 6415449 | ID=Msa0487490-mRNA-1:exon:2253;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6415926 | 6415993 | 6415926 | ID=Msa0487490-mRNA-1:exon:2254;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6416630 | 6416679 | 6416630 | ID=Msa0487490-mRNA-1:exon:2255;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6416866 | 6416935 | 6416866 | ID=Msa0487490-mRNA-1:exon:2256;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6417028 | 6417151 | 6417028 | ID=Msa0487490-mRNA-1:exon:2257;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6417672 | 6417788 | 6417672 | ID=Msa0487490-mRNA-1:exon:2258;Parent=Msa0487490-mRNA-1 |
| chr3_4 | exon | 6418206 | 6418479 | 6418206 | ID=Msa0487490-mRNA-1:exon:2259;Parent=Msa0487490-mRNA-1 |
| chr3_4 | five_prime_UTR | 6413295 | 6413409 | 6413295 | ID=Msa0487490-mRNA-1:five_prime_utr;Parent=Msa0487490-mRNA-1 |
| chr3_4 | five_prime_UTR | 6414989 | 6415112 | 6414989 | ID=Msa0487490-mRNA-1:five_prime_utr;Parent=Msa0487490-mRNA-1 |
| chr3_4 | five_prime_UTR | 6415449 | 6415483 | 6415449 | ID=Msa0487490-mRNA-1:five_prime_utr;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6415484 | 6415510 | 6415484 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6415926 | 6415993 | 6415926 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6416630 | 6416679 | 6416630 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6416866 | 6416935 | 6416866 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6417028 | 6417151 | 6417028 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6417672 | 6417788 | 6417672 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | CDS | 6418206 | 6418304 | 6418206 | ID=Msa0487490-mRNA-1:cds;Parent=Msa0487490-mRNA-1 |
| chr3_4 | three_prime_UTR | 6418305 | 6418479 | 6418305 | ID=Msa0487490-mRNA-1:three_prime_utr;Parent=Msa0487490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
