AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0240640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240640 MtrunA17_Chr2g0291931 93.029 373 15 2 1 363 1 372 0.0 669
Msa0240640 MtrunA17_Chr3g0116461 31.373 153 82 6 76 213 83 227 1.54e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240640 AT5G45170.1 54.795 365 143 4 11 354 5 368 6.87e-131 379
Msa0240640 AT5G45170.2 45.428 339 154 6 11 325 5 336 4.88e-88 269
Msa0240640 AT3G48420.1 29.032 186 107 7 47 213 44 223 1.26e-12 68.6

Find 114 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCATTTCGTGTTGATATT+TGG 0.223031 2_2:+15995564 Msa0240640:three_prime_UTR
TCAGGAAAGGTGATTGCTTC+TGG 0.261931 2_2:+15993999 Msa0240640:CDS
AATCCTTTGGTTGTTTCTTC+TGG 0.279262 2_2:-15995279 None:intergenic
GGCGCGGCGCGGAGATTTGC+CGG 0.313772 2_2:-15988455 None:intergenic
TGCAACTGTGTCCTTGTTGC+AGG 0.329218 2_2:+15994949 Msa0240640:CDS
AAAATTACCATTCAATCCTT+TGG 0.339779 2_2:-15995292 None:intergenic
ACCTGCTCTTGTGGCTTCCT+TGG 0.351095 2_2:-15994039 None:intergenic
GATAGGTAGCCCTGCATATT+CGG 0.364860 2_2:-15994926 None:intergenic
GAGGCTGGGCAAAGTTTATA+TGG 0.382263 2_2:+15993966 Msa0240640:CDS
GGAAGCCAGACTGGAGTAGC+TGG 0.394652 2_2:+15994970 Msa0240640:CDS
GAAGAGTCCCTTCTCATTTG+TGG 0.397140 2_2:-15989740 None:intergenic
AAAGGTGATTGCTTCTGGTT+TGG 0.402048 2_2:+15994004 Msa0240640:CDS
TGGCGATGATCGAAGCAAAA+AGG 0.407324 2_2:+15993923 Msa0240640:CDS
ATTGCCACTGTGGATGGGTT+TGG 0.410611 2_2:+15995217 Msa0240640:CDS
TGGAGTAGCTGGAGCTGAAC+GGG 0.412213 2_2:+15994981 Msa0240640:CDS
TGCATACAATGAAGGAATTC+CGG 0.412496 2_2:+15993294 Msa0240640:CDS
CATTAACAAATCCACGATAT+AGG 0.413902 2_2:+15995592 Msa0240640:three_prime_UTR
CTTGTTGCAGGAAGCCAGAC+TGG 0.414254 2_2:+15994961 Msa0240640:CDS
TTAGCAATTGCCACTGTGGA+TGG 0.417463 2_2:+15995211 Msa0240640:CDS
AAATATCAACACGAAATGAT+AGG 0.420491 2_2:-15995562 None:intergenic
ATATTGGCAGGAAAAGGCTT+TGG 0.427340 2_2:+15991413 Msa0240640:intron
AAGAGTCCCTTCTCATTTGT+GGG 0.436076 2_2:-15989739 None:intergenic
TATTGGCAGGAAAAGGCTTT+GGG 0.439363 2_2:+15991414 Msa0240640:intron
TTATATGGCCAACTTGTCTC+AGG 0.445619 2_2:+15993981 Msa0240640:CDS
TCTTCAGAGACAGTGTTTGC+TGG 0.447988 2_2:+15995529 Msa0240640:three_prime_UTR
TCATTTGTGGGTAGTGATGA+AGG 0.455267 2_2:-15989727 None:intergenic
AAAGCTTTAACTGCAGTCGC+TGG 0.455938 2_2:+15995732 Msa0240640:three_prime_UTR
AACTAACCTTTCGGATAAGC+TGG 0.461066 2_2:-15994232 None:intergenic
CTAGAAATGAAGTTTAAGAT+AGG 0.461407 2_2:+15995504 Msa0240640:three_prime_UTR
ATTGATGATGCATACAATGA+AGG 0.462406 2_2:+15993286 Msa0240640:CDS
CAGCTCCAGCTACTCCAGTC+TGG 0.463683 2_2:-15994975 None:intergenic
AACTTACTCGATTAAAATAC+AGG 0.466271 2_2:-15989573 None:intergenic
ATTGTGGGGATTGAGGAGGC+TGG 0.483023 2_2:+15993951 Msa0240640:CDS
TCTAAACAGAAGTTGCTTCA+CGG 0.483164 2_2:-15995902 None:intergenic
GAAACAACCAAAGGATTGAA+TGG 0.485329 2_2:+15995285 Msa0240640:exon
GGTGATGATTGTGGGGATTG+AGG 0.486082 2_2:+15993944 Msa0240640:CDS
GCCGTTCTTCTCGAAGTCGA+CGG 0.487343 2_2:+15988535 Msa0240640:CDS
GTCAAATACCAAAGCTCCAC+GGG 0.493113 2_2:-15995867 None:intergenic
ATTGCAGCATTTGAGAAACT+TGG 0.494805 2_2:+15989027 Msa0240640:intron
CCGTTCTTCTCGAAGTCGAC+GGG 0.496661 2_2:+15988536 Msa0240640:CDS
ATCCACAGTGGCAATTGCTA+AGG 0.496691 2_2:-15995209 None:intergenic
CGATGAGAAACGGTTACGTT+GGG 0.496965 2_2:-15988412 None:intergenic
GCCAAGGAAGCCACAAGAGC+AGG 0.498725 2_2:+15994038 Msa0240640:CDS
ATTTGAAGCTGGCAAACAAA+AGG 0.504477 2_2:+15995472 Msa0240640:three_prime_UTR
TAGCAATTGCCACTGTGGAT+GGG 0.505041 2_2:+15995212 Msa0240640:CDS
CATGCGGGAGCCGAATATGC+AGG 0.506146 2_2:+15994916 Msa0240640:CDS
GCCACTGTGGATGGGTTTGG+AGG 0.506475 2_2:+15995220 Msa0240640:CDS
AAACGGTTACGTTGGGAAAG+TGG 0.509914 2_2:-15988405 None:intergenic
GCATGCCATGTGTTGTTCTA+CGG 0.512070 2_2:+15995007 Msa0240640:CDS
GACTGTGTTATTGTTGCCAT+TGG 0.515762 2_2:-15988310 None:intergenic
TTGACAGCCTACAGTAAAAG+TGG 0.516246 2_2:+15993325 Msa0240640:CDS
GATGTGGCTGTCGTCGTCAT+CGG 0.517315 2_2:-15988497 None:intergenic
ACTTGCTGAGGATTTGAAGC+TGG 0.518502 2_2:+15995461 Msa0240640:three_prime_UTR
AGGACCATAATAGAAAAGCT+TGG 0.521574 2_2:+15993903 Msa0240640:intron
GCGCGGCGCGGAGATTTGCC+GGG 0.522140 2_2:-15988454 None:intergenic
GTAGCTGGAGCTGAACGGGC+GGG 0.528045 2_2:+15994985 Msa0240640:CDS
ATAACTCACAACATTAAGAA+TGG 0.528983 2_2:-15995697 None:intergenic
ACAAGGACACAGTTGCAGAT+AGG 0.535437 2_2:-15994943 None:intergenic
TCCACAGTGGCAATTGCTAA+GGG 0.539116 2_2:-15995208 None:intergenic
TCACCTTTCCTGAGACAAGT+TGG 0.540422 2_2:-15993989 None:intergenic
CTGGCACAGGATAGTAAACA+AGG 0.544597 2_2:-15995387 None:intergenic
AGCTTCAAATCCTCAGCAAG+TGG 0.546975 2_2:-15995459 None:intergenic
CTTAAAAGATCTGAATAGAC+AGG 0.549569 2_2:-15989075 None:intergenic
GCTGTCGTCGTCATCGGCGA+CGG 0.551934 2_2:-15988491 None:intergenic
ATCTTAAACTTCATTTCTAG+AGG 0.552203 2_2:-15995501 None:intergenic
CAGAAGAAGCGCTGGAGATG+AGG 0.553446 2_2:+15989537 Msa0240640:intron
TCGATGAGAAACGGTTACGT+TGG 0.558435 2_2:-15988413 None:intergenic
CATGTGTTGTTCTACGGAGC+AGG 0.563360 2_2:+15995013 Msa0240640:CDS
AAGCTTTAACTGCAGTCGCT+GGG 0.565168 2_2:+15995733 Msa0240640:three_prime_UTR
CAAATCCACGATATAGGATG+AGG 0.566067 2_2:+15995598 Msa0240640:three_prime_UTR
AGAGGGAAATCGATGAGAAA+CGG 0.567581 2_2:-15988422 None:intergenic
TTGGACTTGATTGTGCGAGT+TGG 0.568648 2_2:+15989046 Msa0240640:CDS
CCGATACAAACCTCTGGCAC+AGG 0.571298 2_2:-15995400 None:intergenic
CGAGGTCATTCGACGTGATG+TGG 0.573213 2_2:-15988513 None:intergenic
TGTTTACTATCCTGTGCCAG+AGG 0.575070 2_2:+15995390 Msa0240640:three_prime_UTR
ACAAAGAATAGCAAAGGAGG+TGG 0.579729 2_2:+15994176 Msa0240640:CDS
ATCACTACCCACAAATGAGA+AGG 0.579842 2_2:+15989732 Msa0240640:CDS
GTTTGCCTCATCCTATATCG+TGG 0.580688 2_2:-15995603 None:intergenic
CCTGTGCCAGAGGTTTGTAT+CGG 0.580964 2_2:+15995400 Msa0240640:three_prime_UTR
AAAGTGGTGATAATATTGCC+AGG 0.582996 2_2:+15993341 Msa0240640:CDS
GGGTAACCGATACAAACCTC+TGG 0.584904 2_2:-15995406 None:intergenic
CTGGAGTAGCTGGAGCTGAA+CGG 0.588173 2_2:+15994980 Msa0240640:CDS
CAGTCTGGCTTCCTGCAACA+AGG 0.591529 2_2:-15994960 None:intergenic
ATTGTGGCTGCACTACATGC+GGG 0.591845 2_2:+15994901 Msa0240640:CDS
TTGTGGGGATTGAGGAGGCT+GGG 0.598027 2_2:+15993952 Msa0240640:CDS
GATTGTGGCTGCACTACATG+CGG 0.601362 2_2:+15994900 Msa0240640:CDS
TTTGGATGAAGAACTTGCCA+AGG 0.603749 2_2:+15994022 Msa0240640:CDS
CCCCTTAGCAATTGCCACTG+TGG 0.604599 2_2:+15995207 Msa0240640:CDS
TAGTCTCAGTTAGTTACCAA+TGG 0.606003 2_2:+15988294 Msa0240640:exon
TGTCAAATACCAAAGCTCCA+CGG 0.608889 2_2:-15995868 None:intergenic
AGTAGCTGGAGCTGAACGGG+CGG 0.609376 2_2:+15994984 Msa0240640:CDS
AACAAACTATCCACTTGCTG+AGG 0.616071 2_2:+15995449 Msa0240640:three_prime_UTR
TGGCCAACTTGTCTCAGGAA+AGG 0.616864 2_2:+15993986 Msa0240640:CDS
GAAGTACATACCTGCTCTTG+TGG 0.622583 2_2:-15994048 None:intergenic
TCGATACCAGCTTATCCGAA+AGG 0.623457 2_2:+15994226 Msa0240640:CDS
AAAACTGCGGTGGCGCGGCG+CGG 0.624837 2_2:-15988466 None:intergenic
TGAGAGACAAAGAATAGCAA+AGG 0.632363 2_2:+15994170 Msa0240640:CDS
CTGCTCCGTAGAACAACACA+TGG 0.637561 2_2:-15995012 None:intergenic
TAGGCTGTCAATATTACCAC+CGG 0.637767 2_2:-15993313 None:intergenic
GATGATTGTGGGGATTGAGG+AGG 0.640224 2_2:+15993947 Msa0240640:CDS
TCTTTAACATACAGATCGGG+TGG 0.640330 2_2:+15989704 Msa0240640:intron
TCACTACCCACAAATGAGAA+GGG 0.642676 2_2:+15989733 Msa0240640:CDS
GAGACAAAGAATAGCAAAGG+AGG 0.650210 2_2:+15994173 Msa0240640:CDS
ATAACTCACTGTTCAACACC+AGG 0.655682 2_2:-15991471 None:intergenic
AAAAGTCTATCTTTACGACC+TGG 0.658689 2_2:+15991453 Msa0240640:CDS
ATGCGGGAGCCGAATATGCA+GGG 0.664421 2_2:+15994917 Msa0240640:CDS
CCCGTCGACTTCGAGAAGAA+CGG 0.669716 2_2:-15988536 None:intergenic
ATGCCAGAAGAAACAACCAA+AGG 0.672590 2_2:+15995276 Msa0240640:CDS
CCACAGTGGCAATTGCTAAG+GGG 0.680461 2_2:-15995207 None:intergenic
GTCCAGTCTAGAGAAGATTG+TGG 0.689857 2_2:+15994885 Msa0240640:intron
TGGCACAGGATAGTAAACAA+GGG 0.717951 2_2:-15995386 None:intergenic
ATACAATGAAGGAATTCCGG+TGG 0.719398 2_2:+15993297 Msa0240640:CDS
ACCTCCAAACCCATCCACAG+TGG 0.757484 2_2:-15995221 None:intergenic
CGACTTCGAGAAGAACGGCG+AGG 0.757538 2_2:-15988531 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTATTTTTTTTAA+AGG - chr2_2:15992821-15992840 None:intergenic 0.0%
!! TAAAAAAAATAAAAAAATAT+TGG + chr2_2:15992822-15992841 Msa0240640:intron 0.0%
!!! TTTATTTCAAAAGTTATTTT+AGG - chr2_2:15991074-15991093 None:intergenic 10.0%
!!! TAAAATAACTTTTGAAATAA+AGG + chr2_2:15991073-15991092 Msa0240640:intron 10.0%
!!! ATCTTCTTTTTTTTTTTTTT+TGG - chr2_2:15992653-15992672 None:intergenic 10.0%
!!! TTTTATTTTTTTTAAAGGTT+GGG - chr2_2:15992816-15992835 None:intergenic 10.0%
!!! TTTTTATTTTTTTTAAAGGT+TGG - chr2_2:15992817-15992836 None:intergenic 10.0%
!!! TTTTTGTTTGTTGATTTATT+AGG + chr2_2:15988664-15988683 Msa0240640:intron 15.0%
!!! TTTTGTTTGTTGATTTATTA+GGG + chr2_2:15988665-15988684 Msa0240640:intron 15.0%
!!! ATTATGAAATACAACTATTT+TGG - chr2_2:15990490-15990509 None:intergenic 15.0%
!! ATATTTATTCCAAATTCATT+TGG - chr2_2:15990570-15990589 None:intergenic 15.0%
!! AAAATTTACCAATTCTTAAA+GGG - chr2_2:15990937-15990956 None:intergenic 15.0%
!!! TATACTTTTTAGTTAAAGTT+AGG + chr2_2:15991826-15991845 Msa0240640:intron 15.0%
!!! ATACTTTTTAGTTAAAGTTA+GGG + chr2_2:15991827-15991846 Msa0240640:intron 15.0%
!! TATCATATCAAAGAATAAAA+AGG - chr2_2:15992074-15992093 None:intergenic 15.0%
!! GTTTCTTAATAAAATTCAAA+CGG - chr2_2:15992583-15992602 None:intergenic 15.0%
!!! TCTTTTTTTTTAGAGAAAAT+GGG - chr2_2:15992749-15992768 None:intergenic 15.0%
!! TATAAAAACATCAATATTTG+AGG + chr2_2:15993749-15993768 Msa0240640:intron 15.0%
!! ATAAAAACATCAATATTTGA+GGG + chr2_2:15993750-15993769 Msa0240640:intron 15.0%
!!! AAATTTAAAATCATATAGGA+AGG - chr2_2:15994595-15994614 None:intergenic 15.0%
!!! TCTGATTTTTTTTTTTTAAG+TGG + chr2_2:15995128-15995147 Msa0240640:intron 15.0%
!! TTACTGTTCAATTTATATGA+TGG + chr2_2:15988763-15988782 Msa0240640:intron 20.0%
!! TTCAATGTAATTAAATGTGT+CGG + chr2_2:15988836-15988855 Msa0240640:intron 20.0%
!!! GGTGTTTTAATATTCTTTTT+TGG + chr2_2:15989097-15989116 Msa0240640:intron 20.0%
!!! AATTTTATTGAAGCCTTATT+TGG + chr2_2:15989218-15989237 Msa0240640:intron 20.0%
!!! TGTATATTTTAAAGTGGATT+TGG - chr2_2:15989323-15989342 None:intergenic 20.0%
!!! TTAGGTCTATTGATATTTTT+TGG + chr2_2:15989628-15989647 Msa0240640:intron 20.0%
!!! TGATTAATGTGATTTTTCTT+TGG + chr2_2:15989818-15989837 Msa0240640:intron 20.0%
!! TCTCAATTTCTTAAAAGAAA+TGG + chr2_2:15989987-15990006 Msa0240640:intron 20.0%
!! GAAAATAGGTAATATTCATT+GGG - chr2_2:15990047-15990066 None:intergenic 20.0%
!! AATGCATATATTTCGAAAAT+AGG - chr2_2:15990061-15990080 None:intergenic 20.0%
!!! TATAGTTTTGGAATTTGTAA+GGG - chr2_2:15990088-15990107 None:intergenic 20.0%
!!! TGCCATTTCAAATATTTATT+CGG + chr2_2:15990133-15990152 Msa0240640:intron 20.0%
!! TACCGAATAAATATTTGAAA+TGG - chr2_2:15990138-15990157 None:intergenic 20.0%
!!! GAGATTTTAATAAATTGCAT+GGG - chr2_2:15990892-15990911 None:intergenic 20.0%
!!! AGAGATTTTAATAAATTGCA+TGG - chr2_2:15990893-15990912 None:intergenic 20.0%
!! GAAAATTTACCAATTCTTAA+AGG - chr2_2:15990938-15990957 None:intergenic 20.0%
!!! AAATGTGGATTAGTTTATTT+TGG + chr2_2:15991021-15991040 Msa0240640:intron 20.0%
!!! AATGTGGATTAGTTTATTTT+GGG + chr2_2:15991022-15991041 Msa0240640:intron 20.0%
!!! TAAGAAAATACAATGTTTTG+GGG - chr2_2:15991106-15991125 None:intergenic 20.0%
!!! GTAAGAAAATACAATGTTTT+GGG - chr2_2:15991107-15991126 None:intergenic 20.0%
!!! TGTAAGAAAATACAATGTTT+TGG - chr2_2:15991108-15991127 None:intergenic 20.0%
!!! ATTTTTATTTATGACAGAGT+CGG - chr2_2:15991193-15991212 None:intergenic 20.0%
!! TTATATCTCAATAACCTAAA+AGG + chr2_2:15991275-15991294 Msa0240640:intron 20.0%
!! CAAGGTAAAATAAGTATAAT+AGG + chr2_2:15991673-15991692 Msa0240640:intron 20.0%
!! AAGTATAATAGGTCATTAAT+AGG + chr2_2:15991684-15991703 Msa0240640:intron 20.0%
!!! TACTTTTTAGTTAAAGTTAG+GGG + chr2_2:15991828-15991847 Msa0240640:intron 20.0%
!! TATTATTCACTAACTAATGT+GGG - chr2_2:15992179-15992198 None:intergenic 20.0%
!! ATATTATTCACTAACTAATG+TGG - chr2_2:15992180-15992199 None:intergenic 20.0%
!!! TTATCAAATAATCATTTTGC+TGG + chr2_2:15992234-15992253 Msa0240640:intron 20.0%
!!! TTTCTAAAAAAACAAAGGTA+CGG + chr2_2:15992419-15992438 Msa0240640:intron 20.0%
!! AATTATATTGCTCAAATGAA+AGG + chr2_2:15992495-15992514 Msa0240640:intron 20.0%
!! ATGCTATTAATTCTCATAAA+AGG + chr2_2:15992616-15992635 Msa0240640:intron 20.0%
!! TGCTATTAATTCTCATAAAA+GGG + chr2_2:15992617-15992636 Msa0240640:intron 20.0%
!!! CTCTTTTTTTTTAGAGAAAA+TGG - chr2_2:15992750-15992769 None:intergenic 20.0%
!!! CATTTTCTCTAAAAAAAAAG+AGG + chr2_2:15992748-15992767 Msa0240640:intron 20.0%
!! AGAGAATTAATACACATAAT+TGG - chr2_2:15993152-15993171 None:intergenic 20.0%
!! GTGTATTAATTCTCTTAAAA+AGG + chr2_2:15993157-15993176 Msa0240640:intron 20.0%
!! TAAAAACATCAATATTTGAG+GGG + chr2_2:15993751-15993770 Msa0240640:intron 20.0%
!! TATTATGGTCCTAAAAATTA+TGG - chr2_2:15993895-15993914 None:intergenic 20.0%
!!! AATCTTAAAGAATCTTTTAG+AGG + chr2_2:15994491-15994510 Msa0240640:intron 20.0%
!! CAAAGAAAGATAATTCAATA+TGG - chr2_2:15994682-15994701 None:intergenic 20.0%
!! TCAATTTATATGATGGAAAC+CGG + chr2_2:15988770-15988789 Msa0240640:intron 25.0%
! ATAGTTTCCTCAACTATTAT+CGG - chr2_2:15988813-15988832 None:intergenic 25.0%
! CATTAATTAACATGATCTCA+TGG - chr2_2:15989193-15989212 None:intergenic 25.0%
!! AAACATCTTTAGTACTGAAA+TGG + chr2_2:15989450-15989469 Msa0240640:intron 25.0%
! AACTTACTCGATTAAAATAC+AGG - chr2_2:15989576-15989595 None:intergenic 25.0%
! ATTGTCTTTAACATACAGAT+CGG + chr2_2:15989700-15989719 Msa0240640:intron 25.0%
! GATATTTCGTTATAAAGTGA+AGG - chr2_2:15989907-15989926 None:intergenic 25.0%
! TTATAACGAAATATCTGTTG+TGG + chr2_2:15989912-15989931 Msa0240640:intron 25.0%
! CATTTATACACCAAAACTAT+AGG - chr2_2:15990024-15990043 None:intergenic 25.0%
! CGAAAATAGGTAATATTCAT+TGG - chr2_2:15990048-15990067 None:intergenic 25.0%
!!! CTATAGTTTTGGAATTTGTA+AGG - chr2_2:15990089-15990108 None:intergenic 25.0%
! CAAATTCCAAAACTATAGTT+AGG + chr2_2:15990091-15990110 Msa0240640:intron 25.0%
! ATTTGCATAGGAAGATTAAA+CGG - chr2_2:15990323-15990342 None:intergenic 25.0%
! TTTCCATGAAAAATTTGCAT+AGG - chr2_2:15990335-15990354 None:intergenic 25.0%
!!! AACTCCATATTTTTTAGATG+TGG + chr2_2:15990538-15990557 Msa0240640:intron 25.0%
!!! ACTCCATATTTTTTAGATGT+GGG + chr2_2:15990539-15990558 Msa0240640:intron 25.0%
! AACGACTTATTCATGATTAT+AGG - chr2_2:15990596-15990615 None:intergenic 25.0%
!!! TTTTGATTTTGGATTCTTGT+AGG + chr2_2:15990686-15990705 Msa0240640:intron 25.0%
! TAAGAAACTATTCCTCAAAT+AGG - chr2_2:15990983-15991002 None:intergenic 25.0%
! TATGTGATGAAGAGTTATAT+AGG - chr2_2:15991396-15991415 None:intergenic 25.0%
! TATAACTCTTCATCACATAT+TGG + chr2_2:15991397-15991416 Msa0240640:intron 25.0%
!! AAAAAGTATAGCTCCTTTAA+GGG - chr2_2:15991816-15991835 None:intergenic 25.0%
!! TAAAAAGTATAGCTCCTTTA+AGG - chr2_2:15991817-15991836 None:intergenic 25.0%
!! TTACATAAGTTTTCCATCAA+AGG - chr2_2:15991973-15991992 None:intergenic 25.0%
! ATCATAATCAACACTATCTT+AGG - chr2_2:15992024-15992043 None:intergenic 25.0%
! TATGATAGCTATTCTAACTA+TGG - chr2_2:15992101-15992120 None:intergenic 25.0%
! ATTATTCACTAACTAATGTG+GGG - chr2_2:15992178-15992197 None:intergenic 25.0%
!! ATTTGATAACCACTATGTAA+AGG - chr2_2:15992223-15992242 None:intergenic 25.0%
!! GAGTTTATTTCACAATTTTG+TGG + chr2_2:15992256-15992275 Msa0240640:intron 25.0%
!!! GTTAGTTGAGATTTTTTTCT+AGG + chr2_2:15992294-15992313 Msa0240640:intron 25.0%
!! TTCTAAAAAAACAAAGGTAC+GGG + chr2_2:15992420-15992439 Msa0240640:intron 25.0%
!! AAAAAAATATTGGTGCTTCA+TGG + chr2_2:15992832-15992851 Msa0240640:intron 25.0%
!! AAAAAATATTGGTGCTTCAT+GGG + chr2_2:15992833-15992852 Msa0240640:intron 25.0%
! ATCATCAATAAACCTGTTAA+TGG - chr2_2:15993275-15993294 None:intergenic 25.0%
!!! CAAAATTAAATAGAAGTACC+TGG - chr2_2:15993362-15993381 None:intergenic 25.0%
! ACTTTACAATAGTACTAACT+AGG + chr2_2:15993384-15993403 Msa0240640:intron 25.0%
! AAGAGCAAAAATCAAAATAG+TGG - chr2_2:15993793-15993812 None:intergenic 25.0%
! TAAAAATTATGGTAAGCACA+AGG - chr2_2:15993884-15993903 None:intergenic 25.0%
!! TTGTGCTTACCATAATTTTT+AGG + chr2_2:15993883-15993902 Msa0240640:intron 25.0%
! GTGAGAATTGAAATGAATTA+TGG + chr2_2:15994367-15994386 Msa0240640:intron 25.0%
!!! CTTTAAGATTTTCAGTTTCT+CGG - chr2_2:15994481-15994500 None:intergenic 25.0%
!! GCAAATAAATTGCAGTTTTA+AGG - chr2_2:15994655-15994674 None:intergenic 25.0%
! GCATTTAACAACTTATCAAT+TGG + chr2_2:15994779-15994798 Msa0240640:intron 25.0%
!!! TCTGTTGATGATAATTGATA+CGG - chr2_2:15995106-15995125 None:intergenic 25.0%
! AAAATTACCATTCAATCCTT+TGG - chr2_2:15995295-15995314 None:intergenic 25.0%
!!! TTCTTTTCTTTGAGTTTCTT+GGG - chr2_2:15995431-15995450 None:intergenic 25.0%
!! ATCTTAAACTTCATTTCTAG+AGG - chr2_2:15995504-15995523 None:intergenic 25.0%
!! CTAGAAATGAAGTTTAAGAT+AGG + chr2_2:15995504-15995523 Msa0240640:three_prime_UTR 25.0%
! AAATATCAACACGAAATGAT+AGG - chr2_2:15995565-15995584 None:intergenic 25.0%
!! TATCATTTCGTGTTGATATT+TGG + chr2_2:15995564-15995583 Msa0240640:three_prime_UTR 25.0%
! ATAACTCACAACATTAAGAA+TGG - chr2_2:15995700-15995719 None:intergenic 25.0%
ACAAAGACACTATGGAATTA+TGG - chr2_2:15988942-15988961 None:intergenic 30.0%
! TTTGTGTTTTTCTGTGTTCA+TGG + chr2_2:15988965-15988984 Msa0240640:intron 30.0%
CTTAAAAGATCTGAATAGAC+AGG - chr2_2:15989078-15989097 None:intergenic 30.0%
! CTGTCTATTCAGATCTTTTA+AGG + chr2_2:15989076-15989095 Msa0240640:CDS 30.0%
!! TATTGAAGCCTTATTTGGTA+AGG + chr2_2:15989223-15989242 Msa0240640:intron 30.0%
ATCCAAATCCTTACCAAATA+AGG - chr2_2:15989234-15989253 None:intergenic 30.0%
!! GCGAGATGTATATTTTAAAG+TGG - chr2_2:15989329-15989348 None:intergenic 30.0%
TCTGATCTTCAATTAACAGT+TGG + chr2_2:15989360-15989379 Msa0240640:intron 30.0%
CTGATCTTCAATTAACAGTT+GGG + chr2_2:15989361-15989380 Msa0240640:intron 30.0%
TTGTCTTTAACATACAGATC+GGG + chr2_2:15989701-15989720 Msa0240640:intron 30.0%
!!! AAAAAGTGTTTTGCAGGAAA+AGG + chr2_2:15989765-15989784 Msa0240640:CDS 30.0%
!! TGATTTTTCTTTGGTGTATG+AGG + chr2_2:15989827-15989846 Msa0240640:intron 30.0%
! TATCTCCATTCCTATAGTTT+TGG + chr2_2:15990011-15990030 Msa0240640:intron 30.0%
ATACACCAAAACTATAGGAA+TGG - chr2_2:15990019-15990038 None:intergenic 30.0%
! TCTGTACCTAACTATAGTTT+TGG - chr2_2:15990100-15990119 None:intergenic 30.0%
! TTTGAAATGGCAAGAGAAAA+AGG - chr2_2:15990125-15990144 None:intergenic 30.0%
! CTAGAAATTTTCTTGTTGCA+AGG - chr2_2:15990205-15990224 None:intergenic 30.0%
CTTGCAACAAGAAAATTTCT+AGG + chr2_2:15990203-15990222 Msa0240640:intron 30.0%
! CTTCCTATGCAAATTTTTCA+TGG + chr2_2:15990329-15990348 Msa0240640:intron 30.0%
! AAGCAAATGAAGTGTTATGA+GGG + chr2_2:15990396-15990415 Msa0240640:intron 30.0%
AGAGTTAGAGATCATCAATA+TGG + chr2_2:15990430-15990449 Msa0240640:intron 30.0%
!!! CATATTTTTTAGATGTGGGA+CGG + chr2_2:15990543-15990562 Msa0240640:intron 30.0%
!!! ATATTTTTTAGATGTGGGAC+GGG + chr2_2:15990544-15990563 Msa0240640:intron 30.0%
!!! AGGCTGAAGAATTTTGATTT+TGG + chr2_2:15990675-15990694 Msa0240640:intron 30.0%
TTGACATCAGTTAACTTCAA+TGG - chr2_2:15990736-15990755 None:intergenic 30.0%
AAGTTAACTGATGTCAACAT+TGG + chr2_2:15990739-15990758 Msa0240640:intron 30.0%
TAATTACACTCAGCAAACTT+AGG - chr2_2:15990867-15990886 None:intergenic 30.0%
! ATCTTCATCCCTTTAAGAAT+TGG + chr2_2:15990926-15990945 Msa0240640:intron 30.0%
TTACTTGATATTGAAGCTCT+AGG + chr2_2:15991243-15991262 Msa0240640:intron 30.0%
GAAAAACCATTTCACCATTT+GGG - chr2_2:15991312-15991331 None:intergenic 30.0%
TTATCCTTGACATGAGTAAA+CGG - chr2_2:15991334-15991353 None:intergenic 30.0%
TTCAACTTCTTGCAAATACA+AGG + chr2_2:15991655-15991674 Msa0240640:intron 30.0%
! ACCAAGTTGTCCTTTATTTA+TGG + chr2_2:15991782-15991801 Msa0240640:intron 30.0%
TCCATAAATAAAGGACAACT+TGG - chr2_2:15991786-15991805 None:intergenic 30.0%
GGATAGATCTCCATAAATAA+AGG - chr2_2:15991795-15991814 None:intergenic 30.0%
! GCATTTTTATGAAATCCTTG+TGG + chr2_2:15991944-15991963 Msa0240640:intron 30.0%
TGGAAAACTTATGTAACAAG+AGG + chr2_2:15991977-15991996 Msa0240640:intron 30.0%
ATAATCAACACTATCTTAGG+TGG - chr2_2:15992021-15992040 None:intergenic 30.0%
TCAAAGAATAAAAAGGAAGC+AGG - chr2_2:15992067-15992086 None:intergenic 30.0%
TTATTCACTAACTAATGTGG+GGG - chr2_2:15992177-15992196 None:intergenic 30.0%
! TTGGTATAGGTTTTTGTCTT+AGG + chr2_2:15992336-15992355 Msa0240640:intron 30.0%
! CGGCATTTCTAAAAAAACAA+AGG + chr2_2:15992414-15992433 Msa0240640:intron 30.0%
TATATTGCTCAAATGAAAGG+TGG + chr2_2:15992498-15992517 Msa0240640:intron 30.0%
ATATTGCTCAAATGAAAGGT+GGG + chr2_2:15992499-15992518 Msa0240640:intron 30.0%
TAAAATTCAAACGGTTCAAG+AGG - chr2_2:15992574-15992593 None:intergenic 30.0%
TCAGAGCTTAGGATATTATT+TGG + chr2_2:15992941-15992960 Msa0240640:intron 30.0%
! ATCTTACCTGTTTCTTCTTA+TGG + chr2_2:15993067-15993086 Msa0240640:intron 30.0%
AGATTTCCATAAGAAGAAAC+AGG - chr2_2:15993076-15993095 None:intergenic 30.0%
ATTAAGAAGCAATGAAGACA+AGG - chr2_2:15993116-15993135 None:intergenic 30.0%
!! ATTGATGATGCATACAATGA+AGG + chr2_2:15993286-15993305 Msa0240640:CDS 30.0%
!! ATTATCACCACTTTTACTGT+AGG - chr2_2:15993335-15993354 None:intergenic 30.0%
TACTAACTAGGACAATCTTA+TGG + chr2_2:15993396-15993415 Msa0240640:intron 30.0%
! GCTAGTCTAAGTTAATGTAT+CGG + chr2_2:15993515-15993534 Msa0240640:intron 30.0%
AATGAAGACAATGAATGGAT+AGG - chr2_2:15993569-15993588 None:intergenic 30.0%
AAAAAGAGAGAAAACTGAAG+AGG - chr2_2:15993609-15993628 None:intergenic 30.0%
ACTAGGTTAAATGAAGTTCA+CGG + chr2_2:15993684-15993703 Msa0240640:intron 30.0%
!!! CTTCACTATGTTTTTTCATG+AGG + chr2_2:15994112-15994131 Msa0240640:intron 30.0%
AGAGAATTGAACTAACCTTT+CGG - chr2_2:15994244-15994263 None:intergenic 30.0%
TATAGGAAGGAAATCAAACA+TGG - chr2_2:15994582-15994601 None:intergenic 30.0%
ATAATTGTTGCAGATATCAG+CGG + chr2_2:15995075-15995094 Msa0240640:intron 30.0%
CAACAAACATGTCAAACAAT+TGG - chr2_2:15995332-15995351 None:intergenic 30.0%
! GTTTGACATGTTTGTTGAAT+AGG + chr2_2:15995335-15995354 Msa0240640:intron 30.0%
!! TCTTTTCTTTGAGTTTCTTG+GGG - chr2_2:15995430-15995449 None:intergenic 30.0%
!! GTTCTTTTCTTTGAGTTTCT+TGG - chr2_2:15995432-15995451 None:intergenic 30.0%
CATTAACAAATCCACGATAT+AGG + chr2_2:15995592-15995611 Msa0240640:three_prime_UTR 30.0%
TAGTCTCAGTTAGTTACCAA+TGG + chr2_2:15988294-15988313 Msa0240640:exon 35.0%
AAAACGCAATTGTTCGAATG+TGG - chr2_2:15988581-15988600 None:intergenic 35.0%
AATCGAACAGCGTTCAATAA+AGG + chr2_2:15988714-15988733 Msa0240640:intron 35.0%
GTTAACACCGATAATAGTTG+AGG + chr2_2:15988803-15988822 Msa0240640:intron 35.0%
ACAAACACACAAAGACACTA+TGG - chr2_2:15988950-15988969 None:intergenic 35.0%
ATTGCAGCATTTGAGAAACT+TGG + chr2_2:15989027-15989046 Msa0240640:intron 35.0%
TGCTTATGCATGTGTTGTAA+TGG + chr2_2:15989141-15989160 Msa0240640:intron 35.0%
!! AGCCTTATTTGGTAAGGATT+TGG + chr2_2:15989229-15989248 Msa0240640:intron 35.0%
ATTCTAGATTCTACACAGTC+AGG - chr2_2:15989408-15989427 None:intergenic 35.0%
!! TAAATTTTCAGAAGAAGCGC+TGG + chr2_2:15989529-15989548 Msa0240640:intron 35.0%
! AGTTGTTCATCTTTTGTCTG+TGG + chr2_2:15989592-15989611 Msa0240640:intron 35.0%
! TCATCTTTTGTCTGTGGTAT+AGG + chr2_2:15989598-15989617 Msa0240640:intron 35.0%
! CATCTTTTGTCTGTGGTATA+GGG + chr2_2:15989599-15989618 Msa0240640:intron 35.0%
! ATCTTTTGTCTGTGGTATAG+GGG + chr2_2:15989600-15989619 Msa0240640:intron 35.0%
!!! CTTCACAAAAAGTGTTTTGC+AGG + chr2_2:15989759-15989778 Msa0240640:CDS 35.0%
AAGGTAAACGTTCTTACACT+TGG + chr2_2:15989784-15989803 Msa0240640:intron 35.0%
CGTTATAAAGTGAAGGTTCA+CGG - chr2_2:15989900-15989919 None:intergenic 35.0%
AGAAGAACATATTCCCTAGT+AGG + chr2_2:15989953-15989972 Msa0240640:intron 35.0%
GATAATCTCTACTCCTACTA+GGG - chr2_2:15989969-15989988 None:intergenic 35.0%
AGATAATCTCTACTCCTACT+AGG - chr2_2:15989970-15989989 None:intergenic 35.0%
CAAGGTAAGAAAGTCAACAA+TGG - chr2_2:15990187-15990206 None:intergenic 35.0%
TTAAACGGAAACTCAGGATT+GGG - chr2_2:15990308-15990327 None:intergenic 35.0%
ATTAAACGGAAACTCAGGAT+TGG - chr2_2:15990309-15990328 None:intergenic 35.0%
! CAAGCAAATGAAGTGTTATG+AGG + chr2_2:15990395-15990414 Msa0240640:intron 35.0%
CGTCCCACATCTAAAAAATA+TGG - chr2_2:15990545-15990564 None:intergenic 35.0%
TTTGATCTGACATCTCACAT+CGG + chr2_2:15990615-15990634 Msa0240640:intron 35.0%
! CGATGAATCATGATTTTGAG+TGG + chr2_2:15990644-15990663 Msa0240640:intron 35.0%
!! GATTTTGAGTGGAGAAAATC+AGG + chr2_2:15990655-15990674 Msa0240640:intron 35.0%
GTAGGTCAAAATACTTGTGT+AGG + chr2_2:15990704-15990723 Msa0240640:intron 35.0%
AGATTGAGTACGGAACAAAA+TGG - chr2_2:15990960-15990979 None:intergenic 35.0%
CTCAAATAGGAGATTGAGTA+CGG - chr2_2:15990970-15990989 None:intergenic 35.0%
GCTATAGTTTCTTGATTCTC+TGG + chr2_2:15991129-15991148 Msa0240640:intron 35.0%
GGAAAAACCATTTCACCATT+TGG - chr2_2:15991313-15991332 None:intergenic 35.0%
! TTTTCCGTTTACTCATGTCA+AGG + chr2_2:15991327-15991346 Msa0240640:intron 35.0%
AAAAGTCTATCTTTACGACC+TGG + chr2_2:15991453-15991472 Msa0240640:CDS 35.0%
TATGGAGATCTATCCCTTAA+AGG + chr2_2:15991800-15991819 Msa0240640:intron 35.0%
AGTTAAAGAGAGAAATCTCG+AGG + chr2_2:15991866-15991885 Msa0240640:intron 35.0%
GTTAAAGAGAGAAATCTCGA+GGG + chr2_2:15991867-15991886 Msa0240640:intron 35.0%
TTAAAGAGAGAAATCTCGAG+GGG + chr2_2:15991868-15991887 Msa0240640:intron 35.0%
ATGCCTACTAATTGATCCTT+GGG - chr2_2:15991928-15991947 None:intergenic 35.0%
AATGCCTACTAATTGATCCT+TGG - chr2_2:15991929-15991948 None:intergenic 35.0%
ATGTAACAAGAGGATGCAAA+TGG + chr2_2:15991987-15992006 Msa0240640:intron 35.0%
GCAGATAATCCCTGAAATTT+GGG - chr2_2:15992138-15992157 None:intergenic 35.0%
TGCAGATAATCCCTGAAATT+TGG - chr2_2:15992139-15992158 None:intergenic 35.0%
!!! CGTAAGGATAGTTTTGGTAT+AGG + chr2_2:15992323-15992342 Msa0240640:intron 35.0%
TATTGCTCAAATGAAAGGTG+GGG + chr2_2:15992500-15992519 Msa0240640:intron 35.0%
AACAACCATTTCCTATGTTC+TGG - chr2_2:15992548-15992567 None:intergenic 35.0%
! TAAGTAGCTTTACTTCGTTG+TGG - chr2_2:15993016-15993035 None:intergenic 35.0%
AACATGAAATTACACCTCCA+TGG - chr2_2:15993046-15993065 None:intergenic 35.0%
CACATAATTGGAGCATAGTT+CGG - chr2_2:15993140-15993159 None:intergenic 35.0%
ATGTTTCTCAGATACTGAGT+AGG + chr2_2:15993185-15993204 Msa0240640:intron 35.0%
AGAGTAACATCTCCATTAAC+AGG + chr2_2:15993260-15993279 Msa0240640:intron 35.0%
TGCATACAATGAAGGAATTC+CGG + chr2_2:15993294-15993313 Msa0240640:CDS 35.0%
AAAGTGGTGATAATATTGCC+AGG + chr2_2:15993341-15993360 Msa0240640:CDS 35.0%
TAACTAGGACAATCTTATGG+TGG + chr2_2:15993399-15993418 Msa0240640:intron 35.0%
ATTACACACTAGCATGTAAG+AGG + chr2_2:15993477-15993496 Msa0240640:intron 35.0%
TAGCATGTAAGAGGACTATT+TGG + chr2_2:15993486-15993505 Msa0240640:intron 35.0%
GAGAGAATGAAGACAATGAA+TGG - chr2_2:15993574-15993593 None:intergenic 35.0%
CTTTATTGGATGACTGAACT+AGG + chr2_2:15993667-15993686 Msa0240640:intron 35.0%
TCAATATTTGAGGGGATCTA+AGG + chr2_2:15993759-15993778 Msa0240640:intron 35.0%
AGGACCATAATAGAAAAGCT+TGG + chr2_2:15993903-15993922 Msa0240640:intron 35.0%
! ATCGCCAAGCTTTTCTATTA+TGG - chr2_2:15993910-15993929 None:intergenic 35.0%
AAGCAAAAAGGTGATGATTG+TGG + chr2_2:15993935-15993954 Msa0240640:CDS 35.0%
AGCAAAAAGGTGATGATTGT+GGG + chr2_2:15993936-15993955 Msa0240640:CDS 35.0%
TGAGAGACAAAGAATAGCAA+AGG + chr2_2:15994170-15994189 Msa0240640:CDS 35.0%
! GTGATTTTGCCCAAGATTAT+TGG + chr2_2:15994408-15994427 Msa0240640:intron 35.0%
AAGCTGTCACCAATAATCTT+GGG - chr2_2:15994420-15994439 None:intergenic 35.0%
TAAGCTGTCACCAATAATCT+TGG - chr2_2:15994421-15994440 None:intergenic 35.0%
GTTTCTCGGTCTTAGTTATT+TGG - chr2_2:15994467-15994486 None:intergenic 35.0%
TGTTCATACGCTCTTTCTTT+GGG - chr2_2:15994752-15994771 None:intergenic 35.0%
ATGTTCATACGCTCTTTCTT+TGG - chr2_2:15994753-15994772 None:intergenic 35.0%
TGGAAAATGAGTGATTGATC+TGG + chr2_2:15994799-15994818 Msa0240640:intron 35.0%
AGAAGTTCGATGAACTTGTA+TGG + chr2_2:15995052-15995071 Msa0240640:intron 35.0%
!! AATCCTTTGGTTGTTTCTTC+TGG - chr2_2:15995282-15995301 None:intergenic 35.0%
GAAACAACCAAAGGATTGAA+TGG + chr2_2:15995285-15995304 Msa0240640:exon 35.0%
!! CTTTTCTTTGAGTTTCTTGG+GGG - chr2_2:15995429-15995448 None:intergenic 35.0%
! ATTTGAAGCTGGCAAACAAA+AGG + chr2_2:15995472-15995491 Msa0240640:three_prime_UTR 35.0%
!!! GTTGTGAGTTATTTTGACTG+CGG + chr2_2:15995708-15995727 Msa0240640:three_prime_UTR 35.0%
!! GGGACATTTTTAACTCATCA+AGG - chr2_2:15995850-15995869 None:intergenic 35.0%
TCTAAACAGAAGTTGCTTCA+CGG - chr2_2:15995905-15995924 None:intergenic 35.0%
! GACTGTGTTATTGTTGCCAT+TGG - chr2_2:15988313-15988332 None:intergenic 40.0%
AGAGGGAAATCGATGAGAAA+CGG - chr2_2:15988425-15988444 None:intergenic 40.0%
!! TTTCCCTCTTTCGTTTTTCC+CGG + chr2_2:15988436-15988455 Msa0240640:CDS 40.0%
TTGTTGATGCGTATCGTGTA+GGG + chr2_2:15988691-15988710 Msa0240640:intron 40.0%
!! TTATCGGTGTTAACGTGTCA+GGG - chr2_2:15988797-15988816 None:intergenic 40.0%
!! ATTATCGGTGTTAACGTGTC+AGG - chr2_2:15988798-15988817 None:intergenic 40.0%
!! TTAAATGTGTCGGTGTCGTT+TGG + chr2_2:15988846-15988865 Msa0240640:intron 40.0%
TGTGTTCATGGAGTGTAATG+CGG + chr2_2:15988977-15988996 Msa0240640:intron 40.0%
! TTGGATTTTGTGCAGTGATG+TGG + chr2_2:15989248-15989267 Msa0240640:intron 40.0%
TGTGGTATAGGGGAGAAATT+AGG + chr2_2:15989610-15989629 Msa0240640:intron 40.0%
TCTTTAACATACAGATCGGG+TGG + chr2_2:15989704-15989723 Msa0240640:intron 40.0%
TCATTTGTGGGTAGTGATGA+AGG - chr2_2:15989730-15989749 None:intergenic 40.0%
ATCACTACCCACAAATGAGA+AGG + chr2_2:15989732-15989751 Msa0240640:CDS 40.0%
TCACTACCCACAAATGAGAA+GGG + chr2_2:15989733-15989752 Msa0240640:CDS 40.0%
AAGAGTCCCTTCTCATTTGT+GGG - chr2_2:15989742-15989761 None:intergenic 40.0%
! TTTCTTTGGTGTATGAGGAC+TGG + chr2_2:15989832-15989851 Msa0240640:intron 40.0%
! TTCTTTGGTGTATGAGGACT+GGG + chr2_2:15989833-15989852 Msa0240640:intron 40.0%
GGAAGATTAAACGGAAACTC+AGG - chr2_2:15990314-15990333 None:intergenic 40.0%
CTTAGTACATCGAACTAGTC+TGG - chr2_2:15990375-15990394 None:intergenic 40.0%
CGTACTCAATCTCCTATTTG+AGG + chr2_2:15990968-15990987 Msa0240640:intron 40.0%
CTCTTGTCTGTTAGCAAATG+TGG + chr2_2:15991006-15991025 Msa0240640:intron 40.0%
!! GGGCAAGATTTTAGCCTTTT+AGG - chr2_2:15991292-15991311 None:intergenic 40.0%
AGGCTAAAATCTTGCCCAAA+TGG + chr2_2:15991295-15991314 Msa0240640:intron 40.0%
ATCTTGCCCAAATGGTGAAA+TGG + chr2_2:15991303-15991322 Msa0240640:intron 40.0%
ACTCTTCATCACATATTGGC+AGG + chr2_2:15991401-15991420 Msa0240640:intron 40.0%
CATCACATATTGGCAGGAAA+AGG + chr2_2:15991407-15991426 Msa0240640:intron 40.0%
ATATTGGCAGGAAAAGGCTT+TGG + chr2_2:15991413-15991432 Msa0240640:intron 40.0%
TATTGGCAGGAAAAGGCTTT+GGG + chr2_2:15991414-15991433 Msa0240640:intron 40.0%
ATAACTCACTGTTCAACACC+AGG - chr2_2:15991474-15991493 None:intergenic 40.0%
CTTGTCATCTCCTAGTTGTT+GGG + chr2_2:15991612-15991631 Msa0240640:intron 40.0%
TTTCATGTGACCCAACAACT+AGG - chr2_2:15991625-15991644 None:intergenic 40.0%
TAATAGGTCTTGCTCTTCCA+TGG + chr2_2:15991700-15991719 Msa0240640:intron 40.0%
AGTCCCAAGGATCAATTAGT+AGG + chr2_2:15991922-15991941 Msa0240640:intron 40.0%
AAGGAAGCAGGAAAGAATCA+TGG - chr2_2:15992055-15992074 None:intergenic 40.0%
! TCCTTTTGAGCCCAAATTTC+AGG + chr2_2:15992125-15992144 Msa0240640:intron 40.0%
! CCTTTTGAGCCCAAATTTCA+GGG + chr2_2:15992126-15992145 Msa0240640:intron 40.0%
CCACTATGTAAAGGATGTCT+TGG - chr2_2:15992214-15992233 None:intergenic 40.0%
CCAAGACATCCTTTACATAG+TGG + chr2_2:15992211-15992230 Msa0240640:intron 40.0%
CCAAAACTATCCTTACGTCT+GGG - chr2_2:15992320-15992339 None:intergenic 40.0%
ACCAAAACTATCCTTACGTC+TGG - chr2_2:15992321-15992340 None:intergenic 40.0%
CAGTTCCAGAACATAGGAAA+TGG + chr2_2:15992540-15992559 Msa0240640:intron 40.0%
TTAAAGGTTGGGTACAGTTG+CGG - chr2_2:15992805-15992824 None:intergenic 40.0%
TACGGGTACGTTTAGCAAAA+TGG + chr2_2:15992906-15992925 Msa0240640:intron 40.0%
!! ATATCCTAAGCTCTGAAGCA+CGG - chr2_2:15992937-15992956 None:intergenic 40.0%
AAGCTACTTATGCAAGTCCA+TGG + chr2_2:15993026-15993045 Msa0240640:intron 40.0%
! CTCAGATACTGAGTAGGTTT+TGG + chr2_2:15993191-15993210 Msa0240640:intron 40.0%
!!! ACTGAGTAGGTTTTGGAACT+TGG + chr2_2:15993198-15993217 Msa0240640:intron 40.0%
ATACAATGAAGGAATTCCGG+TGG + chr2_2:15993297-15993316 Msa0240640:CDS 40.0%
TAGGCTGTCAATATTACCAC+CGG - chr2_2:15993316-15993335 None:intergenic 40.0%
TTGACAGCCTACAGTAAAAG+TGG + chr2_2:15993325-15993344 Msa0240640:CDS 40.0%
! TAGGACAATCTTATGGTGGA+GGG + chr2_2:15993403-15993422 Msa0240640:intron 40.0%
!!! GCGTTTGGGCTTGTTTTATT+TGG + chr2_2:15993433-15993452 Msa0240640:intron 40.0%
AAGAGAGAAAACTGAAGAGG+AGG - chr2_2:15993606-15993625 None:intergenic 40.0%
GCAAAAAGGTGATGATTGTG+GGG + chr2_2:15993937-15993956 Msa0240640:CDS 40.0%
TTATATGGCCAACTTGTCTC+AGG + chr2_2:15993981-15994000 Msa0240640:CDS 40.0%
! AAAGGTGATTGCTTCTGGTT+TGG + chr2_2:15994004-15994023 Msa0240640:CDS 40.0%
TTTGGATGAAGAACTTGCCA+AGG + chr2_2:15994022-15994041 Msa0240640:CDS 40.0%
CAGCAGAAGCTAGACAAAAT+AGG - chr2_2:15994152-15994171 None:intergenic 40.0%
GAGACAAAGAATAGCAAAGG+AGG + chr2_2:15994173-15994192 Msa0240640:CDS 40.0%
ACAAAGAATAGCAAAGGAGG+TGG + chr2_2:15994176-15994195 Msa0240640:CDS 40.0%
AACTAACCTTTCGGATAAGC+TGG - chr2_2:15994235-15994254 None:intergenic 40.0%
TGACAGCTTACAGTTGATCT+TGG + chr2_2:15994431-15994450 Msa0240640:intron 40.0%
TCGGTCTTAGTTATTTGGCT+TGG - chr2_2:15994462-15994481 None:intergenic 40.0%
ATGCCAGAAGAAACAACCAA+AGG + chr2_2:15995276-15995295 Msa0240640:CDS 40.0%
TGGCACAGGATAGTAAACAA+GGG - chr2_2:15995389-15995408 None:intergenic 40.0%
! AACAAACTATCCACTTGCTG+AGG + chr2_2:15995449-15995468 Msa0240640:three_prime_UTR 40.0%
CAAATCCACGATATAGGATG+AGG + chr2_2:15995598-15995617 Msa0240640:three_prime_UTR 40.0%
! GATACGTGTGACTTTTGCTT+TGG + chr2_2:15995632-15995651 Msa0240640:three_prime_UTR 40.0%
GATGAGTTAAAAATGTCCCG+TGG + chr2_2:15995851-15995870 Msa0240640:three_prime_UTR 40.0%
TGTCAAATACCAAAGCTCCA+CGG - chr2_2:15995871-15995890 None:intergenic 40.0%
AAACGGTTACGTTGGGAAAG+TGG - chr2_2:15988408-15988427 None:intergenic 45.0%
CGATGAGAAACGGTTACGTT+GGG - chr2_2:15988415-15988434 None:intergenic 45.0%
TCGATGAGAAACGGTTACGT+TGG - chr2_2:15988416-15988435 None:intergenic 45.0%
TTGCCGGGAAAAACGAAAGA+GGG - chr2_2:15988442-15988461 None:intergenic 45.0%
TTTGCCGGGAAAAACGAAAG+AGG - chr2_2:15988443-15988462 None:intergenic 45.0%
CTTGTTGATGCGTATCGTGT+AGG + chr2_2:15988690-15988709 Msa0240640:intron 45.0%
! ACTGAAGGTGTATCTGGTGT+AGG - chr2_2:15988892-15988911 None:intergenic 45.0%
CACCAGATACACCTTCAGTT+CGG + chr2_2:15988893-15988912 Msa0240640:intron 45.0%
TTGGACTTGATTGTGCGAGT+TGG + chr2_2:15989046-15989065 Msa0240640:CDS 45.0%
CATCTTATAGCCGAGATCCA+CGG - chr2_2:15989274-15989293 None:intergenic 45.0%
GAAGAGTCCCTTCTCATTTG+TGG - chr2_2:15989743-15989762 None:intergenic 45.0%
! ACTCAGGATTGGGTTGTTGT+TGG - chr2_2:15990298-15990317 None:intergenic 45.0%
! TGAAGTGTTATGAGGGAGAC+AGG + chr2_2:15990403-15990422 Msa0240640:intron 45.0%
CTAGGAGATGACAAGCAACT+AGG - chr2_2:15991607-15991626 None:intergenic 45.0%
GCTTGTCATCTCCTAGTTGT+TGG + chr2_2:15991611-15991630 Msa0240640:intron 45.0%
TGGGTCACATGAAAGAGTTG+TGG + chr2_2:15991631-15991650 Msa0240640:intron 45.0%
GTTCTATGCAACTCCTACCA+TGG - chr2_2:15991764-15991783 None:intergenic 45.0%
ATCCTTGGGACTCATAGAAG+AGG - chr2_2:15991914-15991933 None:intergenic 45.0%
ATCCTTGTGGAGTCCTTTGA+TGG + chr2_2:15991957-15991976 Msa0240640:intron 45.0%
TTCCATCAAAGGACTCCACA+AGG - chr2_2:15991962-15991981 None:intergenic 45.0%
CCCTGAAATTTGGGCTCAAA+AGG - chr2_2:15992129-15992148 None:intergenic 45.0%
! TTTTTCTAGGCCCAGACGTA+AGG + chr2_2:15992307-15992326 Msa0240640:intron 45.0%
! CCCAGACGTAAGGATAGTTT+TGG + chr2_2:15992317-15992336 Msa0240640:intron 45.0%
! AACAAAGGTACGGGTACGTT+AGG + chr2_2:15992429-15992448 Msa0240640:intron 45.0%
! TGAAAGGTGGGGCATTTAGT+AGG + chr2_2:15992511-15992530 Msa0240640:intron 45.0%
AAGCAGCAGTTCCAGAACAT+AGG + chr2_2:15992534-15992553 Msa0240640:intron 45.0%
GTACTGCAGTGGTACTTGAA+GGG - chr2_2:15992783-15992802 None:intergenic 45.0%
TTGCTAAACGTACCCGTACA+GGG - chr2_2:15992904-15992923 None:intergenic 45.0%
TTTGCTAAACGTACCCGTAC+AGG - chr2_2:15992905-15992924 None:intergenic 45.0%
!! TATCCTAAGCTCTGAAGCAC+GGG - chr2_2:15992936-15992955 None:intergenic 45.0%
CTACTTATGCAAGTCCATGG+AGG + chr2_2:15993029-15993048 Msa0240640:intron 45.0%
CTAGGACAATCTTATGGTGG+AGG + chr2_2:15993402-15993421 Msa0240640:intron 45.0%
! AGGACAATCTTATGGTGGAG+GGG + chr2_2:15993404-15993423 Msa0240640:intron 45.0%
! AATCTTATGGTGGAGGGGAT+GGG + chr2_2:15993409-15993428 Msa0240640:intron 45.0%
! AGTGTCCACGTCTATTTTCC+TGG + chr2_2:15993822-15993841 Msa0240640:intron 45.0%
! GTGTCCACGTCTATTTTCCT+GGG + chr2_2:15993823-15993842 Msa0240640:intron 45.0%
! TGTCCACGTCTATTTTCCTG+GGG + chr2_2:15993824-15993843 Msa0240640:intron 45.0%
TGGCGATGATCGAAGCAAAA+AGG + chr2_2:15993923-15993942 Msa0240640:CDS 45.0%
GAGGCTGGGCAAAGTTTATA+TGG + chr2_2:15993966-15993985 Msa0240640:CDS 45.0%
TCACCTTTCCTGAGACAAGT+TGG - chr2_2:15993992-15994011 None:intergenic 45.0%
TCAGGAAAGGTGATTGCTTC+TGG + chr2_2:15993999-15994018 Msa0240640:CDS 45.0%
GAAGTACATACCTGCTCTTG+TGG - chr2_2:15994051-15994070 None:intergenic 45.0%
TCGATACCAGCTTATCCGAA+AGG + chr2_2:15994226-15994245 Msa0240640:CDS 45.0%
GTCCAGTCTAGAGAAGATTG+TGG + chr2_2:15994885-15994904 Msa0240640:intron 45.0%
AGCCACAATCTTCTCTAGAC+TGG - chr2_2:15994890-15994909 None:intergenic 45.0%
GATAGGTAGCCCTGCATATT+CGG - chr2_2:15994929-15994948 None:intergenic 45.0%
ACAAGGACACAGTTGCAGAT+AGG - chr2_2:15994946-15994965 None:intergenic 45.0%
! GCATGCCATGTGTTGTTCTA+CGG + chr2_2:15995007-15995026 Msa0240640:CDS 45.0%
!! AGCTCTAGATGTCAAACTGC+AGG - chr2_2:15995182-15995201 None:intergenic 45.0%
TCCACAGTGGCAATTGCTAA+GGG - chr2_2:15995211-15995230 None:intergenic 45.0%
ATCCACAGTGGCAATTGCTA+AGG - chr2_2:15995212-15995231 None:intergenic 45.0%
TTAGCAATTGCCACTGTGGA+TGG + chr2_2:15995211-15995230 Msa0240640:CDS 45.0%
TAGCAATTGCCACTGTGGAT+GGG + chr2_2:15995212-15995231 Msa0240640:CDS 45.0%
CTGGCACAGGATAGTAAACA+AGG - chr2_2:15995390-15995409 None:intergenic 45.0%
TGTTTACTATCCTGTGCCAG+AGG + chr2_2:15995390-15995409 Msa0240640:three_prime_UTR 45.0%
AGCTTCAAATCCTCAGCAAG+TGG - chr2_2:15995462-15995481 None:intergenic 45.0%
! ACTTGCTGAGGATTTGAAGC+TGG + chr2_2:15995461-15995480 Msa0240640:three_prime_UTR 45.0%
TCTTCAGAGACAGTGTTTGC+TGG + chr2_2:15995529-15995548 Msa0240640:three_prime_UTR 45.0%
GTTTGCCTCATCCTATATCG+TGG - chr2_2:15995606-15995625 None:intergenic 45.0%
! AAAGCTTTAACTGCAGTCGC+TGG + chr2_2:15995732-15995751 Msa0240640:three_prime_UTR 45.0%
! AAGCTTTAACTGCAGTCGCT+GGG + chr2_2:15995733-15995752 Msa0240640:three_prime_UTR 45.0%
AAAAATGTCCCGTGGAGCTT+TGG + chr2_2:15995859-15995878 Msa0240640:three_prime_UTR 45.0%
GTCAAATACCAAAGCTCCAC+GGG - chr2_2:15995870-15995889 None:intergenic 45.0%
!! TTATATAAAATAATCTTTAT+TGG + chr2_2:15993653-15993672 Msa0240640:intron 5.0%
!! AAAAAAAAAAAAAAAAATCA+TGG + chr2_2:15994289-15994308 Msa0240640:intron 5.0%
!!! TATTAAATTTAAAATCATAT+AGG - chr2_2:15994599-15994618 None:intergenic 5.0%
ATCGGCGACGGAAAAAACTG+CGG - chr2_2:15988482-15988501 None:intergenic 50.0%
!! GTGTCGGTGTCGTTTGGTAT+TGG + chr2_2:15988852-15988871 Msa0240640:intron 50.0%
! CACCGAACTGAAGGTGTATC+TGG - chr2_2:15988898-15988917 None:intergenic 50.0%
! GTAGCATAGCACCGAACTGA+AGG - chr2_2:15988907-15988926 None:intergenic 50.0%
TGGGACGGGCCAAATGAATT+TGG + chr2_2:15990558-15990577 Msa0240640:intron 50.0%
GATGACGAGTTCAACGACTG+AGG - chr2_2:15991583-15991602 None:intergenic 50.0%
TGGAAGAGCAACTCCTACCA+TGG - chr2_2:15991732-15991751 None:intergenic 50.0%
TGGTAGGAGTTGCTCTTCCA+TGG + chr2_2:15991732-15991751 Msa0240640:intron 50.0%
ATGCAACTCCTACCATGGCT+AGG - chr2_2:15991759-15991778 None:intergenic 50.0%
GAAATCTCGAGGGGTCTTGA+AGG + chr2_2:15991877-15991896 Msa0240640:intron 50.0%
GACCTCTTCTATGAGTCCCA+AGG + chr2_2:15991909-15991928 Msa0240640:intron 50.0%
GTCTTAGGATCTGCGTTGCA+CGG + chr2_2:15992351-15992370 Msa0240640:intron 50.0%
TCTTAGGATCTGCGTTGCAC+GGG + chr2_2:15992352-15992371 Msa0240640:intron 50.0%
GGTACTGCAGTGGTACTTGA+AGG - chr2_2:15992784-15992803 None:intergenic 50.0%
! CAATCTTATGGTGGAGGGGA+TGG + chr2_2:15993408-15993427 Msa0240640:intron 50.0%
ACTGAAGAGGAGGAGAGAGA+GGG - chr2_2:15993596-15993615 None:intergenic 50.0%
AACTGAAGAGGAGGAGAGAG+AGG - chr2_2:15993597-15993616 None:intergenic 50.0%
TCTCCCCAGGAAAATAGACG+TGG - chr2_2:15993830-15993849 None:intergenic 50.0%
GGTGATGATTGTGGGGATTG+AGG + chr2_2:15993944-15993963 Msa0240640:CDS 50.0%
GATGATTGTGGGGATTGAGG+AGG + chr2_2:15993947-15993966 Msa0240640:CDS 50.0%
TGGCCAACTTGTCTCAGGAA+AGG + chr2_2:15993986-15994005 Msa0240640:CDS 50.0%
GATTGTGGCTGCACTACATG+CGG + chr2_2:15994900-15994919 Msa0240640:CDS 50.0%
ATTGTGGCTGCACTACATGC+GGG + chr2_2:15994901-15994920 Msa0240640:CDS 50.0%
TGCAACTGTGTCCTTGTTGC+AGG + chr2_2:15994949-15994968 Msa0240640:CDS 50.0%
CTGCTCCGTAGAACAACACA+TGG - chr2_2:15995015-15995034 None:intergenic 50.0%
! CATGTGTTGTTCTACGGAGC+AGG + chr2_2:15995013-15995032 Msa0240640:CDS 50.0%
CCACAGTGGCAATTGCTAAG+GGG - chr2_2:15995210-15995229 None:intergenic 50.0%
! ATTGCCACTGTGGATGGGTT+TGG + chr2_2:15995217-15995236 Msa0240640:CDS 50.0%
CCTGTGCCAGAGGTTTGTAT+CGG + chr2_2:15995400-15995419 Msa0240640:three_prime_UTR 50.0%
GGGTAACCGATACAAACCTC+TGG - chr2_2:15995409-15995428 None:intergenic 50.0%
GATGTGGCTGTCGTCGTCAT+CGG - chr2_2:15988500-15988519 None:intergenic 55.0%
CGAGGTCATTCGACGTGATG+TGG - chr2_2:15988516-15988535 None:intergenic 55.0%
GCCGTTCTTCTCGAAGTCGA+CGG + chr2_2:15988535-15988554 Msa0240640:CDS 55.0%
!! CCCGTCGACTTCGAGAAGAA+CGG - chr2_2:15988539-15988558 None:intergenic 55.0%
CCGTTCTTCTCGAAGTCGAC+GGG + chr2_2:15988536-15988555 Msa0240640:CDS 55.0%
GGTGTTAACGTGTCAGGGTC+CGG - chr2_2:15988792-15988811 None:intergenic 55.0%
TTTGTGCAGTGATGTGGCCG+TGG + chr2_2:15989254-15989273 Msa0240640:intron 55.0%
AGTGATGTGGCCGTGGATCT+CGG + chr2_2:15989261-15989280 Msa0240640:intron 55.0%
!! CAGAAGAAGCGCTGGAGATG+AGG + chr2_2:15989537-15989556 Msa0240640:intron 55.0%
CTCTTCCATGGACCTAGCCA+TGG + chr2_2:15991712-15991731 Msa0240640:intron 55.0%
TCCATGGACCTAGCCATGGT+AGG + chr2_2:15991716-15991735 Msa0240640:intron 55.0%
TCCTACCATGGCTAGGTCCA+TGG - chr2_2:15991720-15991739 None:intergenic 55.0%
GAGCAACTCCTACCATGGCT+AGG - chr2_2:15991727-15991746 None:intergenic 55.0%
CTCTTCCATGGACCTAGCCA+TGG + chr2_2:15991712-15991731 Msa0240640:intron 55.0%
TCCATGGACCTAGCCATGGT+AGG + chr2_2:15991716-15991735 Msa0240640:intron 55.0%
TCCTACCATGGCTAGGTCCA+TGG - chr2_2:15991720-15991739 None:intergenic 55.0%
GTACAGTTGCGGTACTGCAG+TGG - chr2_2:15992794-15992813 None:intergenic 55.0%
GTACCCGTGCTTCAGAGCTT+AGG + chr2_2:15992930-15992949 Msa0240640:intron 55.0%
AGTGTGCTCATGTTCTCCCC+AGG - chr2_2:15993843-15993862 None:intergenic 55.0%
ATTGTGGGGATTGAGGAGGC+TGG + chr2_2:15993951-15993970 Msa0240640:CDS 55.0%
TTGTGGGGATTGAGGAGGCT+GGG + chr2_2:15993952-15993971 Msa0240640:CDS 55.0%
ACCTGCTCTTGTGGCTTCCT+TGG - chr2_2:15994042-15994061 None:intergenic 55.0%
CGCTCTTTCTTTGGGCGTTC+TGG - chr2_2:15994744-15994763 None:intergenic 55.0%
ATGCGGGAGCCGAATATGCA+GGG + chr2_2:15994917-15994936 Msa0240640:CDS 55.0%
! CAGTCTGGCTTCCTGCAACA+AGG - chr2_2:15994963-15994982 None:intergenic 55.0%
CTTGTTGCAGGAAGCCAGAC+TGG + chr2_2:15994961-15994980 Msa0240640:CDS 55.0%
CTGGAGTAGCTGGAGCTGAA+CGG + chr2_2:15994980-15994999 Msa0240640:CDS 55.0%
TGGAGTAGCTGGAGCTGAAC+GGG + chr2_2:15994981-15995000 Msa0240640:CDS 55.0%
CCCCTTAGCAATTGCCACTG+TGG + chr2_2:15995207-15995226 Msa0240640:CDS 55.0%
ACCTCCAAACCCATCCACAG+TGG - chr2_2:15995224-15995243 None:intergenic 55.0%
CCGATACAAACCTCTGGCAC+AGG - chr2_2:15995403-15995422 None:intergenic 55.0%
CGGAAAAAACTGCGGTGGCG+CGG - chr2_2:15988474-15988493 None:intergenic 60.0%
GGCGACGGAAAAAACTGCGG+TGG - chr2_2:15988479-15988498 None:intergenic 60.0%
CGACTTCGAGAAGAACGGCG+AGG - chr2_2:15988534-15988553 None:intergenic 60.0%
GATCTGCGTTGCACGGGTGA+GGG + chr2_2:15992358-15992377 Msa0240640:intron 60.0%
! TGAGGGTACGGTACCCGGTA+CGG + chr2_2:15992375-15992394 Msa0240640:intron 60.0%
TACCCGCGCAGTACCCTGTA+CGG + chr2_2:15992888-15992907 Msa0240640:intron 60.0%
!! TACCCGTACAGGGTACTGCG+CGG - chr2_2:15992894-15992913 None:intergenic 60.0%
TGGAGGGGATGGGTGCGTTT+GGG + chr2_2:15993419-15993438 Msa0240640:intron 60.0%
GCCAAGGAAGCCACAAGAGC+AGG + chr2_2:15994038-15994057 Msa0240640:CDS 60.0%
CATGCGGGAGCCGAATATGC+AGG + chr2_2:15994916-15994935 Msa0240640:CDS 60.0%
GGAAGCCAGACTGGAGTAGC+TGG + chr2_2:15994970-15994989 Msa0240640:CDS 60.0%
CAGCTCCAGCTACTCCAGTC+TGG - chr2_2:15994978-15994997 None:intergenic 60.0%
AGTAGCTGGAGCTGAACGGG+CGG + chr2_2:15994984-15995003 Msa0240640:CDS 60.0%
! GCCACTGTGGATGGGTTTGG+AGG + chr2_2:15995220-15995239 Msa0240640:CDS 60.0%
GCTGTCGTCGTCATCGGCGA+CGG - chr2_2:15988494-15988513 None:intergenic 65.0%
GGATCTGCGTTGCACGGGTG+AGG + chr2_2:15992357-15992376 Msa0240640:intron 65.0%
GCGTTGCACGGGTGAGGGTA+CGG + chr2_2:15992363-15992382 Msa0240640:intron 65.0%
! ACGGGTGAGGGTACGGTACC+CGG + chr2_2:15992370-15992389 Msa0240640:intron 65.0%
! GAGGGTACGGTACCCGGTAC+GGG + chr2_2:15992376-15992395 Msa0240640:intron 65.0%
TACGGTACCCGGTACGGGTG+CGG + chr2_2:15992381-15992400 Msa0240640:intron 65.0%
ACGGGTGCGGGTACGGGATA+CGG + chr2_2:15992394-15992413 Msa0240640:intron 65.0%
!! ACAGGGTACTGCGCGGGTAC+TGG - chr2_2:15992887-15992906 None:intergenic 65.0%
ACCCGCGCAGTACCCTGTAC+GGG + chr2_2:15992889-15992908 Msa0240640:intron 65.0%
!! ACCCGTACAGGGTACTGCGC+GGG - chr2_2:15992893-15992912 None:intergenic 65.0%
GTGGAGGGGATGGGTGCGTT+TGG + chr2_2:15993418-15993437 Msa0240640:intron 65.0%
GTAGCTGGAGCTGAACGGGC+GGG + chr2_2:15994985-15995004 Msa0240640:CDS 65.0%
AAAACTGCGGTGGCGCGGCG+CGG - chr2_2:15988469-15988488 None:intergenic 70.0%
ACGGTACCCGGTACGGGTGC+GGG + chr2_2:15992382-15992401 Msa0240640:intron 70.0%
ACCCGGTACGGGTGCGGGTA+CGG + chr2_2:15992387-15992406 Msa0240640:intron 70.0%
TCCCGTACCCGCACCCGTAC+CGG - chr2_2:15992392-15992411 None:intergenic 70.0%
GCGCGGCGCGGAGATTTGCC+GGG - chr2_2:15988457-15988476 None:intergenic 75.0%
GGCGCGGCGCGGAGATTTGC+CGG - chr2_2:15988458-15988477 None:intergenic 75.0%
CCCGTACCCGCACCCGTACC+GGG - chr2_2:15992391-15992410 None:intergenic 75.0%
CCCGGTACGGGTGCGGGTAC+GGG + chr2_2:15992388-15992407 Msa0240640:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 15988237 15996011 15988237 ID=Msa0240640;Name=Msa0240640
chr2_2 mRNA 15988237 15996011 15988237 ID=Msa0240640-mRNA-1;Parent=Msa0240640;Name=Msa0240640-mRNA-1;_AED=0.15;_eAED=0.15;_QI=76|0.90|0.91|1|0.81|0.75|12|632|363
chr2_2 exon 15988237 15988557 15988237 ID=Msa0240640-mRNA-1:exon:6547;Parent=Msa0240640-mRNA-1
chr2_2 exon 15988686 15988705 15988686 ID=Msa0240640-mRNA-1:exon:6548;Parent=Msa0240640-mRNA-1
chr2_2 exon 15989034 15989097 15989034 ID=Msa0240640-mRNA-1:exon:6549;Parent=Msa0240640-mRNA-1
chr2_2 exon 15989540 15989588 15989540 ID=Msa0240640-mRNA-1:exon:6550;Parent=Msa0240640-mRNA-1
chr2_2 exon 15989718 15989786 15989718 ID=Msa0240640-mRNA-1:exon:6551;Parent=Msa0240640-mRNA-1
chr2_2 exon 15991423 15991484 15991423 ID=Msa0240640-mRNA-1:exon:6552;Parent=Msa0240640-mRNA-1
chr2_2 exon 15993282 15993362 15993282 ID=Msa0240640-mRNA-1:exon:6553;Parent=Msa0240640-mRNA-1
chr2_2 exon 15993905 15994059 15993905 ID=Msa0240640-mRNA-1:exon:6554;Parent=Msa0240640-mRNA-1
chr2_2 exon 15994163 15994247 15994163 ID=Msa0240640-mRNA-1:exon:6555;Parent=Msa0240640-mRNA-1
chr2_2 exon 15994891 15995034 15994891 ID=Msa0240640-mRNA-1:exon:6556;Parent=Msa0240640-mRNA-1
chr2_2 exon 15995186 15995306 15995186 ID=Msa0240640-mRNA-1:exon:6557;Parent=Msa0240640-mRNA-1
chr2_2 exon 15995383 15996011 15995383 ID=Msa0240640-mRNA-1:exon:6558;Parent=Msa0240640-mRNA-1
chr2_2 five_prime_UTR 15988237 15988312 15988237 ID=Msa0240640-mRNA-1:five_prime_utr;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15988313 15988557 15988313 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15988686 15988705 15988686 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15989034 15989097 15989034 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15989540 15989588 15989540 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15989718 15989786 15989718 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15991423 15991484 15991423 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15993282 15993362 15993282 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15993905 15994059 15993905 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15994163 15994247 15994163 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15994891 15995034 15994891 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 CDS 15995186 15995303 15995186 ID=Msa0240640-mRNA-1:cds;Parent=Msa0240640-mRNA-1
chr2_2 three_prime_UTR 15995304 15995306 15995304 ID=Msa0240640-mRNA-1:three_prime_utr;Parent=Msa0240640-mRNA-1
chr2_2 three_prime_UTR 15995383 15996011 15995383 ID=Msa0240640-mRNA-1:three_prime_utr;Parent=Msa0240640-mRNA-1
Gene Sequence

>Msa0240640

ATGGCAACAATAACACAGTCACTAGCAACTTCATGTTCAACTATTCAACGCATTCGCATTCAACGCACATTCAACTATAACAATAACACGCGCCACTTTCCCAACGTAACCGTTTCTCATCGATTTCCCTCTTTCGTTTTTCCCGGCAAATCTCCGCGCCGCGCCACCGCAGTTTTTTCCGTCGCCGATGACGACGACAGCCACATCACGTCGAATGACCTCGCCGTTCTTCTCGAAGTCGACGGGGTTCTTGTTGATGCGTATCCATTTGAGAAACTTGGACTTGATTGTGCGAGTTGGAACGAACCTGTCTATTCAGATCTTTTAAGAAGAAGCGCTGGAGATGAGGAAAAGATGTTGTTCCTGTATTTTAATCGAATCGGGTGGCCTTCATCACTACCCACAAATGAGAAGGGACTCTTCACAAAAAGTGTTTTGCAGGAAAAGGAAAAGGCTTTGGGAGAGTTTGTGACATCTAAAAGTCTATCTTTACGACCTGGTGTTGAACAGTTTATTGATGATGCATACAATGAAGGAATTCCGGTGGTAATATTGACAGCCTACAGTAAAAGTGGTGATAATATTGCCAGGACCATAATAGAAAAGCTTGGCGATGATCGAAGCAAAAAGGTGATGATTGTGGGGATTGAGGAGGCTGGGCAAAGTTTATATGGCCAACTTGTCTCAGGAAAGGTGATTGCTTCTGGTTTGGATGAAGAACTTGCCAAGGAAGCCACAAGAGCAGCTTCTGCTGAGAGACAAAGAATAGCAAAGGAGGTGGCATCTGTGCTTAAGTTGAGTGTTGAGATCGATACCAGCTTATCCGAAAGTCTAGAGAAGATTGTGGCTGCACTACATGCGGGAGCCGAATATGCAGGGCTACCTATCTGCAACTGTGTCCTTGTTGCAGGAAGCCAGACTGGAGTAGCTGGAGCTGAACGGGCGGGCATGCCATGTGTTGTTCTACGGAGCAGTTTGACATCTAGAGCTGAGTTCCCCTTAGCAATTGCCACTGTGGATGGGTTTGGAGGTGCAGATCTGACTATTTCAAAATTACGCAGTCTATGCCAGAAGAAACAACCAAAGGATTGA

Protein sequence

>Msa0240640

MATITQSLATSCSTIQRIRIQRTFNYNNNTRHFPNVTVSHRFPSFVFPGKSPRRATAVFSVADDDDSHITSNDLAVLLEVDGVLVDAYPFEKLGLDCASWNEPVYSDLLRRSAGDEEKMLFLYFNRIGWPSSLPTNEKGLFTKSVLQEKEKALGEFVTSKSLSLRPGVEQFIDDAYNEGIPVVILTAYSKSGDNIARTIIEKLGDDRSKKVMIVGIEEAGQSLYGQLVSGKVIASGLDEELAKEATRAASAERQRIAKEVASVLKLSVEIDTSLSESLEKIVAALHAGAEYAGLPICNCVLVAGSQTGVAGAERAGMPCVVLRSSLTSRAEFPLAIATVDGFGGADLTISKLRSLCQKKQPKD*