AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644630 MtrunA17_Chr4g0032021 99.485 194 1 0 8 201 363 556 1.62e-128 372
Msa0644630 MtrunA17_Chr4g0039651 72.021 193 54 0 8 200 309 501 1.70e-89 271
Msa0644630 MtrunA17_Chr4g0021771 35.385 195 117 3 8 196 308 499 3.10e-30 116
Msa0644630 MtrunA17_Chr3g0144361 33.673 196 123 1 8 196 293 488 5.20e-30 115
Msa0644630 MtrunA17_Chr7g0214451 34.518 197 118 3 8 196 283 476 1.63e-29 114
Msa0644630 MtrunA17_Chr2g0282031 33.854 192 124 1 8 196 306 497 2.50e-29 113
Msa0644630 MtrunA17_Chr7g0273261 34.694 196 119 4 8 199 47 237 8.38e-29 108
Msa0644630 MtrunA17_Chr4g0036021 34.184 196 122 1 8 196 289 484 1.01e-28 111
Msa0644630 MtrunA17_Chr7g0259471 34.343 198 119 3 8 199 281 473 1.72e-28 110
Msa0644630 MtrunA17_Chr7g0259221 32.828 198 122 3 8 199 283 475 7.33e-28 108
Msa0644630 MtrunA17_Chr1g0213631 33.846 195 123 1 8 196 235 429 7.60e-28 108
Msa0644630 MtrunA17_Chr5g0432581 33.168 202 126 3 8 201 284 484 1.46e-27 108
Msa0644630 MtrunA17_Chr7g0273281 34.872 195 116 3 8 196 303 492 1.60e-27 108
Msa0644630 MtrunA17_Chr4g0034681 32.843 204 124 2 8 201 293 493 2.58e-27 107
Msa0644630 MtrunA17_Chr1g0213611 32.338 201 121 2 8 196 328 525 3.63e-26 104
Msa0644630 MtrunA17_Chr8g0390521 33.673 196 124 1 8 197 274 469 8.92e-26 103
Msa0644630 MtrunA17_Chr6g0457781 35.079 191 118 3 9 196 352 539 8.02e-25 100
Msa0644630 MtrunA17_Chr4g0066581 31.633 196 124 3 8 197 293 484 4.53e-24 98.6
Msa0644630 MtrunA17_Chr8g0373531 32.995 197 123 2 8 196 284 479 1.32e-23 97.4
Msa0644630 MtrunA17_Chr3g0121674 30.882 204 131 2 2 195 79 282 1.57e-23 95.1
Msa0644630 MtrunA17_Chr6g0485661 31.771 192 122 3 8 191 312 502 1.89e-23 97.1
Msa0644630 MtrunA17_Chr7g0250881 34.555 191 119 2 9 196 312 499 3.76e-23 96.3
Msa0644630 MtrunA17_Chr8g0373181 33.668 199 118 4 8 196 288 482 1.82e-22 94.0
Msa0644630 MtrunA17_Chr2g0286721 28.788 198 131 3 8 199 290 483 5.42e-22 92.8
Msa0644630 MtrunA17_Chr1g0205691 33.488 215 123 6 4 201 278 489 7.13e-22 92.4
Msa0644630 MtrunA17_Chr8g0373191 32.367 207 120 4 8 201 260 459 1.13e-21 91.7
Msa0644630 MtrunA17_Chr4g0004821 29.688 192 126 3 13 200 287 473 1.42e-21 91.7
Msa0644630 MtrunA17_Chr1g0205671 32.000 200 125 3 11 201 292 489 1.91e-21 91.3
Msa0644630 MtrunA17_Chr5g0394341 33.498 203 122 7 9 201 290 489 1.32e-20 89.0
Msa0644630 MtrunA17_Chr5g0420841 32.487 197 120 5 11 196 291 485 6.90e-20 86.7
Msa0644630 MtrunA17_Chr6g0486021 32.461 191 122 3 13 200 301 487 1.06e-19 86.3
Msa0644630 MtrunA17_Chr1g0155221 30.500 200 124 5 8 196 290 485 1.07e-19 86.3
Msa0644630 MtrunA17_Chr4g0065311 33.679 193 116 5 12 195 289 478 1.17e-19 86.3
Msa0644630 MtrunA17_Chr1g0205681 33.000 200 123 3 11 201 293 490 1.34e-19 85.9
Msa0644630 MtrunA17_Chr3g0115711 35.897 195 113 5 11 195 290 482 2.54e-18 82.4
Msa0644630 MtrunA17_Chr4g0065351 35.233 193 113 5 12 195 132 321 3.19e-18 81.3
Msa0644630 MtrunA17_Chr4g0065324 34.021 194 114 4 12 195 297 486 3.34e-18 82.0
Msa0644630 MtrunA17_Chr8g0390261 33.679 193 116 4 12 195 296 485 8.32e-18 80.9
Msa0644630 MtrunA17_Chr8g0390141 32.828 198 119 5 8 195 292 485 1.10e-17 80.5
Msa0644630 MtrunA17_Chr3g0078991 30.256 195 126 5 11 197 294 486 2.02e-17 79.7
Msa0644630 MtrunA17_Chr2g0290181 42.609 115 62 1 91 201 444 558 2.08e-17 79.7
Msa0644630 MtrunA17_Chr3g0085971 29.442 197 126 4 11 196 291 485 2.75e-17 79.3
Msa0644630 MtrunA17_Chr6g0486681 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa0644630 MtrunA17_Chr6g0486671 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa0644630 MtrunA17_Chr5g0403831 29.648 199 131 3 8 197 295 493 5.60e-17 78.6
Msa0644630 MtrunA17_Chr3g0119401 29.442 197 127 3 9 199 342 532 1.19e-16 77.4
Msa0644630 MtrunA17_Chr3g0146061 30.500 200 127 3 8 195 524 723 1.30e-16 77.4
Msa0644630 MtrunA17_Chr3g0128171 31.633 196 121 6 11 195 245 438 1.52e-16 77.0
Msa0644630 MtrunA17_Chr3g0115751 32.828 198 115 6 11 195 296 488 2.91e-16 76.3
Msa0644630 MtrunA17_Chr3g0144261 32.338 201 122 5 8 195 514 713 3.94e-16 76.3
Msa0644630 MtrunA17_Chr4g0048411 31.818 198 120 6 11 196 292 486 9.55e-16 74.7
Msa0644630 MtrunA17_Chr8g0370151 31.500 200 125 3 8 195 145 344 1.20e-15 73.9
Msa0644630 MtrunA17_Chr3g0115741 33.333 198 114 6 11 195 294 486 1.43e-15 74.3
Msa0644630 MtrunA17_Chr3g0115721 34.848 198 111 6 11 195 291 483 1.88e-15 73.9
Msa0644630 MtrunA17_Chr7g0257631 32.984 191 118 4 13 195 330 518 2.44e-15 73.6
Msa0644630 MtrunA17_Chr5g0417611 28.283 198 129 5 11 197 293 488 2.85e-15 73.6
Msa0644630 MtrunA17_Chr8g0376631 38.000 100 62 0 98 197 451 550 3.29e-15 73.2
Msa0644630 MtrunA17_Chr5g0404181 36.937 111 66 2 86 196 22 128 3.46e-15 69.3
Msa0644630 MtrunA17_Chr3g0078791 31.156 199 98 7 11 195 237 410 5.44e-15 72.4
Msa0644630 MtrunA17_Chr3g0115781 29.293 198 124 5 11 196 293 486 5.87e-15 72.4
Msa0644630 MtrunA17_Chr3g0115731 31.980 197 118 4 11 195 270 462 8.44e-15 72.0
Msa0644630 MtrunA17_Chr5g0445601 30.890 191 122 4 13 195 296 484 2.33e-14 70.9
Msa0644630 MtrunA17_Chr3g0078971 28.500 200 121 5 11 196 293 484 5.51e-14 69.7
Msa0644630 MtrunA17_Chr3g0128081 30.583 206 121 8 11 201 292 490 6.87e-14 69.3
Msa0644630 MtrunA17_Chr2g0303731 35.789 95 61 0 103 197 457 551 9.79e-14 68.9
Msa0644630 MtrunA17_Chr4g0048051 34.653 202 118 6 11 201 292 490 1.15e-13 68.9
Msa0644630 MtrunA17_Chr5g0434251 35.789 95 61 0 102 196 42 136 1.26e-13 65.9
Msa0644630 MtrunA17_Chr5g0407441 30.000 200 128 3 8 195 506 705 1.76e-13 68.6
Msa0644630 MtrunA17_Chr8g0376611 36.170 94 60 0 103 196 387 480 3.78e-13 67.4
Msa0644630 MtrunA17_Chr5g0419321 28.643 199 128 3 8 193 532 729 4.23e-12 64.3
Msa0644630 MtrunA17_Chr1g0164851 29.442 197 125 5 11 196 291 484 5.16e-12 63.9
Msa0644630 MtrunA17_Chr1g0164871 28.934 197 126 5 11 196 291 484 8.98e-12 63.2
Msa0644630 MtrunA17_Chr2g0290161 40.000 115 65 1 91 201 351 465 1.09e-11 63.2
Msa0644630 MtrunA17_Chr5g0437021 28.708 209 120 8 11 201 291 488 6.01e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644630 AT5G59250.1 87.629 194 24 0 8 201 365 558 6.08e-114 336
Msa0644630 AT3G03090.1 70.466 193 57 0 8 200 311 503 7.20e-88 267
Msa0644630 AT5G17010.1 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0644630 AT5G17010.3 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0644630 AT5G17010.4 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0644630 AT5G17010.2 51.333 150 46 1 51 200 318 440 1.91e-36 132
Msa0644630 AT5G27360.2 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa0644630 AT5G27360.5 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa0644630 AT5G27360.1 37.000 200 115 4 8 201 276 470 1.19e-32 122
Msa0644630 AT5G27360.3 37.000 200 115 4 8 201 324 518 1.54e-32 122
Msa0644630 AT5G27350.1 35.000 200 119 4 8 201 272 466 1.16e-30 117
Msa0644630 AT3G18830.1 34.010 197 123 1 8 197 300 496 3.18e-30 116
Msa0644630 AT3G05165.3 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0644630 AT3G05165.2 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0644630 AT3G05165.1 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0644630 AT2G20780.2 33.854 192 124 1 8 196 248 439 1.70e-27 108
Msa0644630 AT2G20780.1 33.854 192 124 1 8 196 306 497 2.17e-27 108
Msa0644630 AT5G18840.1 31.658 199 126 3 9 201 286 480 2.60e-27 108
Msa0644630 AT2G16120.1 32.828 198 125 1 8 197 290 487 1.12e-26 106
Msa0644630 AT2G16130.1 32.828 198 125 1 8 197 290 487 1.51e-26 106
Msa0644630 AT3G05150.1 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa0644630 AT3G05150.3 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa0644630 AT3G05150.2 33.000 200 122 4 8 200 276 470 2.59e-26 105
Msa0644630 AT3G05160.3 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa0644630 AT3G05160.2 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa0644630 AT4G36670.1 33.838 198 122 2 8 197 281 477 4.78e-26 104
Msa0644630 AT3G05160.1 32.323 198 123 3 8 199 262 454 5.80e-26 103
Msa0644630 AT2G43330.1 34.010 197 123 3 8 197 281 477 8.74e-26 103
Msa0644630 AT1G08930.1 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa0644630 AT1G08930.2 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa0644630 AT2G48020.2 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa0644630 AT2G48020.1 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa0644630 AT1G54730.2 33.333 198 121 4 8 199 273 465 1.81e-24 100
Msa0644630 AT2G18480.1 32.487 197 125 2 8 197 286 481 1.89e-24 100
Msa0644630 AT1G79820.2 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa0644630 AT1G79820.1 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa0644630 AT1G08900.5 29.231 195 127 4 13 201 229 418 2.97e-22 93.6
Msa0644630 AT1G08900.3 29.231 195 127 4 13 201 263 452 4.47e-22 93.2
Msa0644630 AT1G08900.1 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa0644630 AT1G08900.2 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa0644630 AT1G08890.1 32.308 195 117 6 13 199 273 460 2.76e-21 90.9
Msa0644630 AT5G26340.1 32.020 203 125 5 9 201 291 490 4.31e-21 90.5
Msa0644630 AT1G08920.1 29.293 198 129 4 8 199 273 465 4.87e-21 90.5
Msa0644630 AT1G75220.1 32.000 200 122 4 8 197 289 484 3.58e-20 87.8
Msa0644630 AT3G05155.1 29.146 199 127 4 8 198 265 457 1.36e-19 86.3
Msa0644630 AT1G08920.2 28.293 205 129 5 8 199 273 472 4.39e-19 84.7
Msa0644630 AT5G16150.2 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0644630 AT5G16150.1 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0644630 AT5G16150.3 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0644630 AT4G04750.3 30.769 195 124 3 9 197 324 513 6.79e-19 84.3
Msa0644630 AT3G51490.2 31.500 200 125 4 8 195 517 716 7.11e-19 84.3
Msa0644630 AT4G04750.1 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa0644630 AT4G04750.2 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa0644630 AT3G51490.3 31.500 200 125 4 8 195 467 666 7.84e-19 84.3
Msa0644630 AT4G04760.3 32.308 195 121 4 9 197 217 406 1.42e-18 83.2
Msa0644630 AT4G04760.1 32.308 195 121 4 9 197 276 465 1.67e-18 83.2
Msa0644630 AT1G19450.1 32.512 203 117 7 8 197 290 485 2.36e-18 82.8
Msa0644630 AT5G23270.1 33.005 203 119 7 11 201 294 491 3.18e-18 82.4
Msa0644630 AT1G79820.3 35.329 167 105 1 38 201 278 444 3.30e-18 82.0
Msa0644630 AT4G02050.2 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa0644630 AT4G02050.1 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa0644630 AT1G79820.5 35.329 167 105 1 38 201 216 382 3.72e-18 81.6
Msa0644630 AT3G05165.6 29.167 168 108 3 8 169 271 433 8.24e-18 81.3
Msa0644630 AT4G16480.2 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0644630 AT4G16480.3 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0644630 AT4G16480.1 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0644630 AT1G54730.5 28.571 196 112 4 8 199 273 444 4.40e-17 79.0
Msa0644630 AT1G77210.3 34.314 204 108 6 8 195 143 336 6.75e-17 78.2
Msa0644630 AT3G05960.1 34.483 203 119 7 9 201 286 484 8.55e-17 78.2
Msa0644630 AT1G77210.2 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa0644630 AT1G77210.1 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa0644630 AT5G26250.1 33.663 202 122 6 9 201 287 485 1.10e-16 77.8
Msa0644630 AT3G20460.1 28.796 191 113 4 23 201 309 488 1.85e-16 77.4
Msa0644630 AT4G21480.1 32.487 197 118 6 12 196 291 484 2.84e-16 76.6
Msa0644630 AT3G05400.1 28.205 195 129 4 8 196 267 456 3.03e-16 76.6
Msa0644630 AT3G05400.2 28.205 195 129 4 8 196 247 436 3.19e-16 76.6
Msa0644630 AT1G67300.1 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa0644630 AT1G67300.3 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa0644630 AT1G05030.2 29.231 195 124 3 9 196 275 462 3.45e-16 76.6
Msa0644630 AT1G50310.2 33.163 196 117 6 11 195 151 343 3.55e-16 76.3
Msa0644630 AT3G05165.4 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa0644630 AT3G05165.5 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa0644630 AT1G05030.1 29.231 195 124 3 9 196 327 514 4.54e-16 76.3
Msa0644630 AT1G50310.1 33.163 196 117 6 11 195 294 486 5.07e-16 75.9
Msa0644630 AT1G20840.2 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa0644630 AT1G20840.1 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa0644630 AT1G54730.3 31.646 158 98 3 8 159 273 426 5.98e-16 75.9
Msa0644630 AT3G51490.1 30.102 196 125 4 8 195 517 708 7.52e-16 75.9
Msa0644630 AT4G04760.2 31.088 193 123 5 9 197 276 462 1.04e-15 75.1
Msa0644630 AT2G35740.1 42.857 105 57 1 92 196 455 556 1.13e-15 75.1
Msa0644630 AT1G67300.2 29.534 193 126 4 13 200 304 491 1.22e-15 75.1
Msa0644630 AT1G34580.2 29.231 195 124 5 12 195 246 437 1.30e-15 74.7
Msa0644630 AT1G34580.1 29.231 195 124 5 12 195 296 487 1.69e-15 74.7
Msa0644630 AT1G30220.1 41.237 97 53 1 104 196 457 553 2.10e-15 74.3
Msa0644630 AT3G19940.1 32.000 200 114 7 11 195 293 485 2.16e-15 74.3
Msa0644630 AT4G35300.9 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0644630 AT4G35300.2 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0644630 AT4G35300.3 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0644630 AT4G35300.4 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.8 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.6 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.11 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.1 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.10 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.7 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0644630 AT4G35300.5 30.808 198 125 3 8 193 326 523 4.17e-15 73.6
Msa0644630 AT1G07340.1 32.057 209 117 7 9 201 288 487 7.30e-15 72.8
Msa0644630 AT1G11260.1 30.457 197 122 6 11 195 292 485 2.23e-14 71.2
Msa0644630 AT5G27360.4 35.385 130 74 3 8 131 276 401 3.21e-13 67.8
Msa0644630 AT1G79820.4 31.884 138 87 2 9 143 301 434 5.28e-13 67.4
Msa0644630 AT3G19930.1 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa0644630 AT3G19930.2 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa0644630 AT1G08920.3 25.949 158 107 3 8 159 273 426 9.21e-12 63.5

Find 153 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGTCACTTCAAGATTT+TGG 0.110124 4_3:-48713905 None:intergenic
TCCCTCTATGGGGCTCTTCT+TGG 0.227190 4_3:+48708326 Msa0644630:five_prime_UTR
GCATTGGGTGGCTTGCTATT+TGG 0.229582 4_3:+48707996 Msa0644630:five_prime_UTR
TTGAGTTCTTTACTCTTTGA+TGG 0.229675 4_3:-48706437 None:intergenic
TTAGCAGGAAGGCTGCTTTA+TGG 0.247331 4_3:+48708749 Msa0644630:five_prime_UTR
CTTCATCGTCTTGGGGATTC+TGG 0.254886 4_3:+48708943 Msa0644630:five_prime_UTR
GGCTGCCAATTGTTGCTGTT+GGG 0.261289 4_3:+48710075 Msa0644630:CDS
TTGCTATTTGGTTATGATAT+TGG 0.265731 4_3:+48708008 Msa0644630:five_prime_UTR
TGCTCCACTTGCTGTGTTAA+TGG 0.274481 4_3:+48709111 Msa0644630:five_prime_UTR
AGCAACCACCGAGGAGATTC+GGG 0.294580 4_3:-48709154 None:intergenic
TTTGAATTGCAGATATCATT+TGG 0.297753 4_3:+48713526 Msa0644630:intron
GCTAAAGTTTCAGTTGTTAT+TGG 0.319773 4_3:+48709735 Msa0644630:CDS
AAAGAACTCTTCATCGTCTT+GGG 0.324920 4_3:+48708935 Msa0644630:five_prime_UTR
GTCCTAAAAGTGGACGATTT+GGG 0.331656 4_3:+48709877 Msa0644630:CDS
TGTCCTAAAAGTGGACGATT+TGG 0.336456 4_3:+48709876 Msa0644630:CDS
TAAGAGACAGTGTAATGTTT+TGG 0.353354 4_3:-48706343 None:intergenic
TTTGGTGAGTTTGTAGAATC+AGG 0.355551 4_3:-48706325 None:intergenic
GGGCTGCCAATTGTTGCTGT+TGG 0.358412 4_3:+48710074 Msa0644630:CDS
TAGGTCAGTGGTTCCCTCTA+TGG 0.360177 4_3:+48708314 Msa0644630:intron
CTTATTCTTGCTGCCTCAAA+TGG 0.361439 4_3:+48706362 Msa0644630:five_prime_UTR
AAGCAACCACCGAGGAGATT+CGG 0.364539 4_3:-48709155 None:intergenic
CTAATGCAATGGCCGCAAAA+AGG 0.369183 4_3:-48713816 None:intergenic
TTTGCAATTGCTGATTTCAT+TGG 0.369315 4_3:+48708362 Msa0644630:five_prime_UTR
TTATGCAGGTCCCATTCTTC+AGG 0.371687 4_3:+48709587 Msa0644630:CDS
CTTTGCATTCTCACCATTGA+AGG 0.377650 4_3:+48713654 Msa0644630:CDS
CTGCTTTATGGACTTGGTAT+AGG 0.378257 4_3:+48708761 Msa0644630:five_prime_UTR
TCTGCTTATTATAAATTTCT+CGG 0.392006 4_3:+48710050 Msa0644630:CDS
CAAGTTTCTGCAATGTATAA+AGG 0.395816 4_3:-48708878 None:intergenic
AGGTCAGTGGTTCCCTCTAT+GGG 0.396820 4_3:+48708315 Msa0644630:intron
CAAATGATTGTTTGTGGAAG+AGG 0.401329 4_3:-48706502 None:intergenic
GATACCATCAGCCAACTTAT+CGG 0.403507 4_3:-48713550 None:intergenic
TTGAATTGCAGATATCATTT+GGG 0.403806 4_3:+48713527 Msa0644630:intron
GGGAGAAGACCTCTGCTGAT+TGG 0.408128 4_3:+48709898 Msa0644630:CDS
CACTACCAAGTACATACAAC+AGG 0.412932 4_3:-48708691 None:intergenic
ACAATTAAGTACCTGAAGAA+TGG 0.413009 4_3:-48709598 None:intergenic
ATTCCACTGCAGGAGTATCT+TGG 0.414752 4_3:+48713775 Msa0644630:intron
AAAAGAACTCTTCATCGTCT+TGG 0.415813 4_3:+48708934 Msa0644630:five_prime_UTR
TTGTTTCCCTGGGCAAACTA+AGG 0.416488 4_3:+48709230 Msa0644630:five_prime_UTR
GCTCCACTTGCTGTGTTAAT+GGG 0.419247 4_3:+48709112 Msa0644630:five_prime_UTR
GGAAGGCTGCTTTATGGACT+TGG 0.423684 4_3:+48708755 Msa0644630:five_prime_UTR
TTCCATTCAGCTTGGTCTTG+TGG 0.424172 4_3:+48708189 Msa0644630:five_prime_UTR
AAGCTGAATGGAAGAAAGAT+TGG 0.431812 4_3:-48708179 None:intergenic
GAACTTGGTGTTCTCTTAGC+AGG 0.432287 4_3:+48708734 Msa0644630:five_prime_UTR
CAAGTTACTCAAATCACATC+AGG 0.433338 4_3:+48714045 Msa0644630:three_prime_UTR
AAACTAAGGGGCCGGCCACT+TGG 0.434562 4_3:+48709244 Msa0644630:five_prime_UTR
GCCGGCCCCTTAGTTTGCCC+AGG 0.434700 4_3:-48709237 None:intergenic
ACATAATTCCAATAGATAAC+AGG 0.438031 4_3:+48709546 Msa0644630:intron
TTATGGACTTGGTATAGGTC+TGG 0.452748 4_3:+48708766 Msa0644630:five_prime_UTR
GGAAAAGGCAATTGTTTCCC+TGG 0.453254 4_3:+48709219 Msa0644630:five_prime_UTR
AACAGCATTGGCAGCGAAGT+TGG 0.454377 4_3:-48713626 None:intergenic
GGGGCTAGTATTATTTCAAC+AGG 0.459642 4_3:+48709399 Msa0644630:CDS
AGTTGTTATTGGCTTATTCA+AGG 0.462352 4_3:+48709746 Msa0644630:CDS
AACGCCCCAACAGCAACAAT+TGG 0.464360 4_3:-48710080 None:intergenic
CTGAGCTTAGCGGTGTCGCT+TGG 0.469539 4_3:+48708155 Msa0644630:five_prime_UTR
CAATTAAGTACCTGAAGAAT+GGG 0.470930 4_3:-48709597 None:intergenic
GCTAAGAGAACACCAAGTTC+TGG 0.473041 4_3:-48708731 None:intergenic
AATAGCAAGCCACCCAATGC+AGG 0.473802 4_3:-48707993 None:intergenic
CTCAAAGCCGTACAAGGAAA+AGG 0.476933 4_3:+48709178 Msa0644630:five_prime_UTR
AATCTTTCTTCCATTCAGCT+TGG 0.477827 4_3:+48708181 Msa0644630:five_prime_UTR
TATCATTTGGGCCGATAAGT+TGG 0.479888 4_3:+48713539 Msa0644630:CDS
CCCTGGGCAAACTAAGGGGC+CGG 0.484017 4_3:+48709236 Msa0644630:five_prime_UTR
GAAGTCTGCCTATGAAGATC+AGG 0.486030 4_3:+48709312 Msa0644630:exon
CCCACTTCGCACTAGAGGAC+GGG 0.489293 4_3:+48713582 Msa0644630:CDS
GACTCAGGAGTGAGGAATCA+TGG 0.493637 4_3:-48706303 None:intergenic
TGTTTCCCTGGGCAAACTAA+GGG 0.494124 4_3:+48709231 Msa0644630:five_prime_UTR
TATGATATTGGTGCCACATC+CGG 0.495216 4_3:+48708020 Msa0644630:five_prime_UTR
AAGTACTTGCTTGGAATCTA+CGG 0.502156 4_3:-48706575 None:intergenic
CCAAGAAAATTTCTCTTCGT+CGG 0.505514 4_3:-48706715 None:intergenic
CATGGCTGTTTGTTATCTGT+TGG 0.506259 4_3:-48706285 None:intergenic
ATGTTATATATCTAGAGTGC+TGG 0.506363 4_3:+48709690 Msa0644630:intron
ATTCTTTGTCACCAAGTGGC+CGG 0.507367 4_3:-48709255 None:intergenic
TCTTTACGTTGGTTGCTACC+AGG 0.507374 4_3:+48710106 Msa0644630:CDS
GAAGAGTGAGAGGTAAGAAG+TGG 0.508074 4_3:-48706546 None:intergenic
CTTGCTGTGTTAATGGGACT+CGG 0.509742 4_3:+48709118 Msa0644630:five_prime_UTR
TGAAATTGTAGCACCGGATG+TGG 0.509979 4_3:-48708033 None:intergenic
GCTGCCAATTGTTGCTGTTG+GGG 0.510591 4_3:+48710076 Msa0644630:CDS
CTCGGATTCCTGATCTTCAT+AGG 0.511530 4_3:-48709320 None:intergenic
GCTTTCAGATTAGTACAGTA+GGG 0.511807 4_3:+48709062 Msa0644630:five_prime_UTR
TGGCGACAAATGATTGTTTG+TGG 0.523196 4_3:-48706508 None:intergenic
CCTAGTGTTCTGTATTATGC+AGG 0.524477 4_3:+48709573 Msa0644630:CDS
ATTGTATATATCACATGTGT+GGG 0.524514 4_3:+48713968 Msa0644630:three_prime_UTR
CGGTGCTACAATTTCACTGC+AGG 0.525053 4_3:+48708040 Msa0644630:five_prime_UTR
ACTGCCACAGCACCAGAACT+TGG 0.525417 4_3:+48708719 Msa0644630:five_prime_UTR
TTCTGGACAGGTTCAAGCGC+AGG 0.528839 4_3:+48706656 Msa0644630:intron
CTGATGTGATTTGAGTAACT+TGG 0.529187 4_3:-48714044 None:intergenic
CTGCTGATTGGAGGTGTCAG+TGG 0.531307 4_3:+48709910 Msa0644630:CDS
AGAAGACCTCTGCTGATTGG+AGG 0.533132 4_3:+48709901 Msa0644630:CDS
TTGCTTCTCAAAGCCGTACA+AGG 0.534906 4_3:+48709172 Msa0644630:five_prime_UTR
ACTTCTGTCCCAGAGACAAA+AGG 0.535446 4_3:+48713859 Msa0644630:CDS
CGACTCTCCCCGAATCTCCT+CGG 0.539213 4_3:+48709146 Msa0644630:five_prime_UTR
GAAATTTATAATAAGCAGAA+AGG 0.540216 4_3:-48710046 None:intergenic
TACCACAAGACCAAGCTGAA+TGG 0.542358 4_3:-48708191 None:intergenic
CTGCAGTGAAATTGTAGCAC+CGG 0.542977 4_3:-48708039 None:intergenic
CCTGCATAATACAGAACACT+AGG 0.543440 4_3:-48709573 None:intergenic
ATCGGTTGCTGTCCTAAAAG+TGG 0.545652 4_3:+48709867 Msa0644630:CDS
GCCAAGAAGAGCCCCATAGA+GGG 0.547197 4_3:-48708327 None:intergenic
TGCAAAGGTAACAACAGCAT+TGG 0.547945 4_3:-48713638 None:intergenic
CTTATTATAAATTTCTCGGA+GGG 0.549041 4_3:+48710054 Msa0644630:CDS
TCACAGTCACCTGAGCTTAG+CGG 0.551554 4_3:+48708145 Msa0644630:intron
TCCTAAAAGTGGACGATTTG+GGG 0.552375 4_3:+48709878 Msa0644630:CDS
AAGAACTCTTCATCGTCTTG+GGG 0.554273 4_3:+48708936 Msa0644630:five_prime_UTR
AATGAATTGCAGGCTATGCA+TGG 0.556209 4_3:+48708851 Msa0644630:intron
GCAGCCCTGTTGTATGTACT+TGG 0.557623 4_3:+48708686 Msa0644630:five_prime_UTR
AGAAAGGAGAACTAAAGATA+AGG 0.558234 4_3:-48710030 None:intergenic
AGCCAAGAAGAGCCCCATAG+AGG 0.560695 4_3:-48708328 None:intergenic
CCCGTCCTCTAGTGCGAAGT+GGG 0.561592 4_3:-48713582 None:intergenic
CAAGCGACACCGCTAAGCTC+AGG 0.561862 4_3:-48708154 None:intergenic
CCACTTCGCACTAGAGGACG+GGG 0.565068 4_3:+48713583 Msa0644630:CDS
AGTCCCATTAACACAGCAAG+TGG 0.566767 4_3:-48709115 None:intergenic
CCGGCCCCTTAGTTTGCCCA+GGG 0.566966 4_3:-48709236 None:intergenic
AGCTTTCAGATTAGTACAGT+AGG 0.568312 4_3:+48709061 Msa0644630:five_prime_UTR
TCCCACTTCGCACTAGAGGA+CGG 0.571506 4_3:+48713581 Msa0644630:CDS
AACACCAAGTTCTGGTGCTG+TGG 0.571690 4_3:-48708723 None:intergenic
CATTGTATATATCACATGTG+TGG 0.573595 4_3:+48713967 Msa0644630:three_prime_UTR
ATCTTCCCACTTCGCACTAG+AGG 0.577398 4_3:+48713577 Msa0644630:CDS
GTTGTTGATGATGCCATTTG+AGG 0.578483 4_3:-48706375 None:intergenic
TCAGATTCTTTGTCACCAAG+TGG 0.579152 4_3:-48709259 None:intergenic
GAAAAGGCAATTGTTTCCCT+GGG 0.582828 4_3:+48709220 Msa0644630:five_prime_UTR
GGGGCGTTGCTTCTTTACGT+TGG 0.589105 4_3:+48710095 Msa0644630:CDS
TGGGCCGATAAGTTGGCTGA+TGG 0.598976 4_3:+48713546 Msa0644630:CDS
CACAAGTGACACTAATGCAA+TGG 0.600703 4_3:-48713827 None:intergenic
AGAGTCCCACGGATTTGTGA+TGG 0.602252 4_3:-48708902 None:intergenic
TGTGCTTCCTGCATCACACA+TGG 0.602276 4_3:+48706240 None:intergenic
CCCCGTCCTCTAGTGCGAAG+TGG 0.606766 4_3:-48713583 None:intergenic
TTGGTGTTCTCTTAGCAGGA+AGG 0.607143 4_3:+48708738 Msa0644630:five_prime_UTR
GAAGAGGAAGAAATGAGGCG+TGG 0.607193 4_3:-48706486 None:intergenic
GGGAGGAAGCGACAACTCAT+CGG 0.612912 4_3:+48708662 Msa0644630:intron
CTTTCAGATTAGTACAGTAG+GGG 0.614719 4_3:+48709063 Msa0644630:five_prime_UTR
TTGTGGAAGAGGAAGAAATG+AGG 0.616735 4_3:-48706491 None:intergenic
AGGCAGACTTCAACGAGACA+AGG 0.627144 4_3:-48709300 None:intergenic
ATAGCAAGCCACCCAATGCA+GGG 0.629494 4_3:-48707992 None:intergenic
AGTGGATAAGTGACATGTGT+TGG 0.631323 4_3:-48706528 None:intergenic
AGTTTGTAGAATCAGGACTC+AGG 0.633651 4_3:-48706318 None:intergenic
GGTCAGTGGTTCCCTCTATG+GGG 0.636174 4_3:+48708316 Msa0644630:intron
CTTCAATGGTGAGAATGCAA+AGG 0.636883 4_3:-48713653 None:intergenic
GTTTCCCTGGGCAAACTAAG+GGG 0.640750 4_3:+48709232 Msa0644630:five_prime_UTR
TTTCAGATTAGTACAGTAGG+GGG 0.644587 4_3:+48709064 Msa0644630:five_prime_UTR
CTTGTCCATCACAAATCCGT+GGG 0.645682 4_3:+48708897 Msa0644630:five_prime_UTR
ACTTGTCCATCACAAATCCG+TGG 0.650114 4_3:+48708896 Msa0644630:five_prime_UTR
GCTTATTATAAATTTCTCGG+AGG 0.651466 4_3:+48710053 Msa0644630:CDS
TTAATGATACTAGAGTCCCA+CGG 0.652488 4_3:-48708913 None:intergenic
CTCTCCCCGAATCTCCTCGG+TGG 0.653850 4_3:+48709149 Msa0644630:five_prime_UTR
CTATGAAGATCAGGAATCCG+AGG 0.658223 4_3:+48709321 Msa0644630:exon
ACGGTGATGAGAAGAGTGAG+AGG 0.662826 4_3:-48706556 None:intergenic
AGAATCAGGACTCAGGAGTG+AGG 0.663633 4_3:-48706311 None:intergenic
TAATGTCAAACATAGGTCAG+TGG 0.676967 4_3:+48708302 Msa0644630:intron
CCTGTAGTTAGTAATGACAT+CGG 0.683946 4_3:+48709849 Msa0644630:intron
CTGACACCTCCAATCAGCAG+AGG 0.685495 4_3:-48709907 None:intergenic
AAGTTACTCAAATCACATCA+GGG 0.687402 4_3:+48714046 Msa0644630:three_prime_UTR
CACTTCGCACTAGAGGACGG+GGG 0.710664 4_3:+48713584 Msa0644630:CDS
GCAACCACCGAGGAGATTCG+GGG 0.734795 4_3:-48709153 None:intergenic
ACTACCAAGTACATACAACA+GGG 0.734915 4_3:-48708690 None:intergenic
GCTTTGAGAAGCAACCACCG+AGG 0.802099 4_3:-48709163 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACATATATATAATCTA+CGG - chr4_3:48709678-48709697 None:intergenic 10.0%
!!! GAAATACTTTTTTTTTTTTT+GGG - chr4_3:48710367-48710386 None:intergenic 10.0%
!!! TGAAATACTTTTTTTTTTTT+TGG - chr4_3:48710368-48710387 None:intergenic 10.0%
!! TTCAAAAAAATTAAAAGAGT+AGG + chr4_3:48707121-48707140 Msa0644630:intron 15.0%
!! TAAATTTCAATTATTATGCT+GGG + chr4_3:48707446-48707465 Msa0644630:intron 15.0%
!! ATCTATAATTCTATATGTAA+TGG - chr4_3:48708806-48708825 None:intergenic 15.0%
!! TAGAAATGAAAAATCTAAAT+AGG - chr4_3:48709776-48709795 None:intergenic 15.0%
!!! CAAAAATGTCATAATTTTAT+TGG - chr4_3:48710513-48710532 None:intergenic 15.0%
!! AATTGACAAAAAAAAATGAT+TGG + chr4_3:48710647-48710666 Msa0644630:intron 15.0%
!!! TAATAAGTTGTTTTGATAAA+AGG + chr4_3:48710861-48710880 Msa0644630:intron 15.0%
!!! AATAAGTTGTTTTGATAAAA+GGG + chr4_3:48710862-48710881 Msa0644630:intron 15.0%
!!! AATTTTGTTTATTCATCTTC+TGG + chr4_3:48706639-48706658 Msa0644630:intron 20.0%
!! ATGTGAAAAACTGTAATAAA+TGG + chr4_3:48706837-48706856 Msa0644630:intron 20.0%
!! TGTGAAAAACTGTAATAAAT+GGG + chr4_3:48706838-48706857 Msa0644630:intron 20.0%
!! CTAAATTTCAATTATTATGC+TGG + chr4_3:48707445-48707464 Msa0644630:intron 20.0%
!! AAATTTCAATTATTATGCTG+GGG + chr4_3:48707447-48707466 Msa0644630:intron 20.0%
!! TTCATATAAGTTATAAGCAA+TGG - chr4_3:48707480-48707499 None:intergenic 20.0%
!! AAACTGTCCAAATTATTATA+AGG + chr4_3:48707693-48707712 Msa0644630:intron 20.0%
!!! ATTAATTTGGATAAAACACT+AGG + chr4_3:48708641-48708660 Msa0644630:intron 20.0%
!!! TTAATTTGGATAAAACACTA+GGG + chr4_3:48708642-48708661 Msa0644630:intron 20.0%
!! TCAATATAACATTAGTAAAG+TGG - chr4_3:48709484-48709503 None:intergenic 20.0%
!! CTTTACTAATGTTATATTGA+AGG + chr4_3:48709484-48709503 Msa0644630:intron 20.0%
!! ATGTTATATTGAAGGAAATA+TGG + chr4_3:48709492-48709511 Msa0644630:intron 20.0%
!! GAAATTTATAATAAGCAGAA+AGG - chr4_3:48710049-48710068 None:intergenic 20.0%
!! TCTGCTTATTATAAATTTCT+CGG + chr4_3:48710050-48710069 Msa0644630:CDS 20.0%
!!! ATTATTTTTGCCATAGAATT+CGG + chr4_3:48710210-48710229 Msa0644630:intron 20.0%
!!! AGAATTTTTCATTTATTGCT+AGG - chr4_3:48710301-48710320 None:intergenic 20.0%
!! ATCGATATTAAATTGTGAAT+TGG + chr4_3:48710431-48710450 Msa0644630:intron 20.0%
!! AATCAAATGAAAAAGAAAAG+TGG + chr4_3:48710612-48710631 Msa0644630:intron 20.0%
!! AACCCTTAATATTTAGAAAA+GGG + chr4_3:48710786-48710805 Msa0644630:intron 20.0%
!!! ATCCCTTTTCTAAATATTAA+GGG - chr4_3:48710791-48710810 None:intergenic 20.0%
!!! AATCCCTTTTCTAAATATTA+AGG - chr4_3:48710792-48710811 None:intergenic 20.0%
!!! GATCATATTTTCAAATTACA+TGG - chr4_3:48712132-48712151 None:intergenic 20.0%
!! TGAAATTTGACATAAATCTA+CGG - chr4_3:48713506-48713525 None:intergenic 20.0%
!! CTTCAATAAGAAAATAAAAC+TGG - chr4_3:48713697-48713716 None:intergenic 20.0%
! AAAAAAGTGACAGAAACATA+CGG - chr4_3:48706756-48706775 None:intergenic 25.0%
!!! TTTTTTTTATTTCTCTCCTG+AGG + chr4_3:48706777-48706796 Msa0644630:intron 25.0%
! ATTTCAATTAAGACCTTGAT+TGG + chr4_3:48706980-48706999 Msa0644630:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr4_3:48707264-48707283 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr4_3:48707268-48707287 None:intergenic 25.0%
! AATTAGAATGTGTTTGTGTT+TGG - chr4_3:48707775-48707794 None:intergenic 25.0%
!! ACACAAACACATTCTAATTT+TGG + chr4_3:48707776-48707795 Msa0644630:intron 25.0%
!!! TTGCTATTTGGTTATGATAT+TGG + chr4_3:48708008-48708027 Msa0644630:five_prime_UTR 25.0%
!! TCTTATTTACATTATCCAGA+AGG + chr4_3:48708395-48708414 Msa0644630:intron 25.0%
! TGTAAAAATCTTTACACTGA+CGG - chr4_3:48708474-48708493 None:intergenic 25.0%
!!! TTTTCAAGATTTGAAGGAAA+AGG + chr4_3:48709204-48709223 Msa0644630:five_prime_UTR 25.0%
! ACATAATTCCAATAGATAAC+AGG + chr4_3:48709546-48709565 Msa0644630:intron 25.0%
!!! CACTTTTCTTTTAATTGTGT+AGG + chr4_3:48710007-48710026 Msa0644630:intron 25.0%
! CTTATTATAAATTTCTCGGA+GGG + chr4_3:48710054-48710073 Msa0644630:CDS 25.0%
! ATAATGAAATACTGTTGAAG+AGG - chr4_3:48710195-48710214 None:intergenic 25.0%
! TTTATTGGCAATGTATCTTA+CGG - chr4_3:48710498-48710517 None:intergenic 25.0%
! AAATGAAAAAGAAAAGTGGT+TGG + chr4_3:48710616-48710635 Msa0644630:intron 25.0%
!! ATTGGTCATGCTAAATTTTT+AGG + chr4_3:48710665-48710684 Msa0644630:intron 25.0%
!!! GATTAAGAAGTGGATTTTAT+CGG - chr4_3:48710763-48710782 None:intergenic 25.0%
! ATAAAATCCACTTCTTAATC+AGG + chr4_3:48710763-48710782 Msa0644630:intron 25.0%
! GAACCCTTAATATTTAGAAA+AGG + chr4_3:48710785-48710804 Msa0644630:intron 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG + chr4_3:48711007-48711026 Msa0644630:intron 25.0%
!!! TGGTAACCATTTAATTTTTG+TGG - chr4_3:48712238-48712257 None:intergenic 25.0%
! GAAAAGGAAAATTAGTCATT+GGG - chr4_3:48712539-48712558 None:intergenic 25.0%
! AGAAAAGGAAAATTAGTCAT+TGG - chr4_3:48712540-48712559 None:intergenic 25.0%
! TAGAAATGTTTGAGTCAATA+AGG + chr4_3:48712682-48712701 Msa0644630:intron 25.0%
! AGAAATGTTTGAGTCAATAA+GGG + chr4_3:48712683-48712702 Msa0644630:intron 25.0%
! TTTGACATTCAATACAAAGA+GGG - chr4_3:48712768-48712787 None:intergenic 25.0%
! ATTTGACATTCAATACAAAG+AGG - chr4_3:48712769-48712788 None:intergenic 25.0%
! TAGCTATCATATATCATATG+CGG - chr4_3:48712928-48712947 None:intergenic 25.0%
! TTAGATTTATGTGAGTTGTA+AGG - chr4_3:48713227-48713246 None:intergenic 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG + chr4_3:48711007-48711026 Msa0644630:intron 25.0%
! AGGAATTCATCATAATGAAT+CGG + chr4_3:48713353-48713372 Msa0644630:intron 25.0%
! TTTGAATTGCAGATATCATT+TGG + chr4_3:48713526-48713545 Msa0644630:intron 25.0%
! TTGAATTGCAGATATCATTT+GGG + chr4_3:48713527-48713546 Msa0644630:intron 25.0%
! AGAAAATAAAACTGGAAGTA+AGG - chr4_3:48713689-48713708 None:intergenic 25.0%
! ATTGTATATATCACATGTGT+GGG + chr4_3:48713968-48713987 Msa0644630:three_prime_UTR 25.0%
! TAAGAGACAGTGTAATGTTT+TGG - chr4_3:48706346-48706365 None:intergenic 30.0%
TTGAGTTCTTTACTCTTTGA+TGG - chr4_3:48706440-48706459 None:intergenic 30.0%
! TAGATAAGTGTTTTGTGTGT+AGG + chr4_3:48706808-48706827 Msa0644630:intron 30.0%
GAAAAACTGTAATAAATGGG+AGG + chr4_3:48706841-48706860 Msa0644630:intron 30.0%
! GTATGTGATGTTTTACTACT+TGG + chr4_3:48706881-48706900 Msa0644630:intron 30.0%
! ACATTAGTAGTCACTTTAAG+TGG - chr4_3:48706920-48706939 None:intergenic 30.0%
ACTACTAATGTGAAAGACAA+TGG + chr4_3:48706929-48706948 Msa0644630:intron 30.0%
TGAAAGACAATGGAAAACTT+AGG + chr4_3:48706939-48706958 Msa0644630:intron 30.0%
GTGGAAAATATGACGAAAAA+TGG + chr4_3:48707090-48707109 Msa0644630:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr4_3:48707265-48707284 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr4_3:48707271-48707290 None:intergenic 30.0%
TGGATGAAATAGAGGAAAAT+GGG - chr4_3:48707350-48707369 None:intergenic 30.0%
ATGGATGAAATAGAGGAAAA+TGG - chr4_3:48707351-48707370 None:intergenic 30.0%
TTGTTTATCCAAACAATGAG+AGG + chr4_3:48707593-48707612 Msa0644630:intron 30.0%
! GTTACTGTAATTGGTTTATC+AGG + chr4_3:48707615-48707634 Msa0644630:intron 30.0%
AGGTGCTCCTTATAATAATT+TGG - chr4_3:48707703-48707722 None:intergenic 30.0%
AAACAGCATGCTTAATTAAC+TGG - chr4_3:48707953-48707972 None:intergenic 30.0%
!! AGCATGCTGTTTCAAAATTT+AGG + chr4_3:48707961-48707980 Msa0644630:intron 30.0%
! TATGATTTTTGTGTCCTAGT+TGG + chr4_3:48708212-48708231 Msa0644630:intron 30.0%
TAACTGCTAATGTCAAACAT+AGG + chr4_3:48708295-48708314 Msa0644630:intron 30.0%
!! TTTGCAATTGCTGATTTCAT+TGG + chr4_3:48708362-48708381 Msa0644630:five_prime_UTR 30.0%
AATTCATTTCGCTTGTAAGA+TGG - chr4_3:48708839-48708858 None:intergenic 30.0%
CAAGTTTCTGCAATGTATAA+AGG - chr4_3:48708881-48708900 None:intergenic 30.0%
AACTTAAGAGTTTACTGAGT+TGG + chr4_3:48709001-48709020 Msa0644630:intron 30.0%
ACTTAAGAGTTTACTGAGTT+GGG + chr4_3:48709002-48709021 Msa0644630:intron 30.0%
! AAAAGAACCTTTTCCTTGTA+CGG - chr4_3:48709188-48709207 None:intergenic 30.0%
!! AGGTTCTTTTCAAGATTTGA+AGG + chr4_3:48709198-48709217 Msa0644630:five_prime_UTR 30.0%
ATTACGAATGCTTTCAGATT+GGG - chr4_3:48709373-48709392 None:intergenic 30.0%
AATTACGAATGCTTTCAGAT+TGG - chr4_3:48709374-48709393 None:intergenic 30.0%
!! AATCTGAAAGCATTCGTAAT+TGG + chr4_3:48709373-48709392 Msa0644630:intron 30.0%
AATAACTCATTGCACTGAAA+TGG - chr4_3:48709430-48709449 None:intergenic 30.0%
CAATTAAGTACCTGAAGAAT+GGG - chr4_3:48709600-48709619 None:intergenic 30.0%
ACAATTAAGTACCTGAAGAA+TGG - chr4_3:48709601-48709620 None:intergenic 30.0%
! ATGTTATATATCTAGAGTGC+TGG + chr4_3:48709690-48709709 Msa0644630:intron 30.0%
GCTAAAGTTTCAGTTGTTAT+TGG + chr4_3:48709735-48709754 Msa0644630:CDS 30.0%
!! AGTTGTTATTGGCTTATTCA+AGG + chr4_3:48709746-48709765 Msa0644630:CDS 30.0%
AGAAAGGAGAACTAAAGATA+AGG - chr4_3:48710033-48710052 None:intergenic 30.0%
GCTTATTATAAATTTCTCGG+AGG + chr4_3:48710053-48710072 Msa0644630:CDS 30.0%
!!! TTTTTTTTGGGTACAAGAGA+GGG - chr4_3:48710355-48710374 None:intergenic 30.0%
!!! TTTTTTTTTGGGTACAAGAG+AGG - chr4_3:48710356-48710375 None:intergenic 30.0%
GTAACATAATAGAGAGAATG+AGG + chr4_3:48710832-48710851 Msa0644630:intron 30.0%
ATAATAATACTCCCAAGTAG+TGG + chr4_3:48711179-48711198 Msa0644630:intron 30.0%
!!! ATCTTGGCAGAATTTTAGTT+GGG + chr4_3:48711473-48711492 Msa0644630:intron 30.0%
! TTGTGAATTGAAGCATCTTT+GGG + chr4_3:48711510-48711529 Msa0644630:intron 30.0%
TCAAGGTCTTAGACAAAATT+GGG - chr4_3:48711560-48711579 None:intergenic 30.0%
TTCAAGGTCTTAGACAAAAT+TGG - chr4_3:48711561-48711580 None:intergenic 30.0%
!! ATTTTGTCTAAGACCTTGAA+AGG + chr4_3:48711561-48711580 Msa0644630:intron 30.0%
GCTTAAATTCCATCTATTAC+AGG - chr4_3:48711736-48711755 None:intergenic 30.0%
ATAAACTTACCTTATCTTCC+GGG - chr4_3:48711819-48711838 None:intergenic 30.0%
CATAAACTTACCTTATCTTC+CGG - chr4_3:48711820-48711839 None:intergenic 30.0%
GGAAGATAAGGTAAGTTTAT+GGG + chr4_3:48711819-48711838 Msa0644630:intron 30.0%
GAAGATAAGGTAAGTTTATG+GGG + chr4_3:48711820-48711839 Msa0644630:intron 30.0%
! ACAGTTTTTCACTTTACAAG+GGG - chr4_3:48712054-48712073 None:intergenic 30.0%
! GACAGTTTTTCACTTTACAA+GGG - chr4_3:48712055-48712074 None:intergenic 30.0%
! AGAATTGGCTTAGAAATGTA+GGG + chr4_3:48712076-48712095 Msa0644630:intron 30.0%
ATATGCTCATTTCATTCCTT+TGG - chr4_3:48712196-48712215 None:intergenic 30.0%
! TAATTTTTGTGGTTGTCGAT+AGG - chr4_3:48712227-48712246 None:intergenic 30.0%
CGACAACCACAAAAATTAAA+TGG + chr4_3:48712229-48712248 Msa0644630:intron 30.0%
TATTTGGACTGATATCAGTA+CGG - chr4_3:48712289-48712308 None:intergenic 30.0%
ATATCAGTCCAAATAAGTGA+AGG + chr4_3:48712294-48712313 Msa0644630:intron 30.0%
TCCAAATAAGTGAAGGAATT+GGG + chr4_3:48712301-48712320 Msa0644630:intron 30.0%
TAAACCTTTCCAAAAGAAGA+GGG + chr4_3:48712416-48712435 Msa0644630:intron 30.0%
TCAAACTGCATATTCTACAT+TGG - chr4_3:48712503-48712522 None:intergenic 30.0%
! TGAATTTAGAGTGTGACTAT+GGG + chr4_3:48712583-48712602 Msa0644630:intron 30.0%
AAATTCAAAGCCCATCAATT+TGG + chr4_3:48712785-48712804 Msa0644630:intron 30.0%
! ATTTGCTAATGTAGGCAATT+GGG + chr4_3:48712996-48713015 Msa0644630:intron 30.0%
GTAACATAATAGAGAGAATG+AGG + chr4_3:48710832-48710851 Msa0644630:intron 30.0%
ATTGATCCTTTGCCTTATAA+AGG + chr4_3:48713135-48713154 Msa0644630:intron 30.0%
TTGATCCTTTGCCTTATAAA+GGG + chr4_3:48713136-48713155 Msa0644630:intron 30.0%
TTGTAATCAGTCCCTTTATA+AGG - chr4_3:48713150-48713169 None:intergenic 30.0%
TATAAAGGGACTGATTACAA+CGG + chr4_3:48713150-48713169 Msa0644630:intron 30.0%
AATTCATCATAATGAATCGG+AGG + chr4_3:48713356-48713375 Msa0644630:intron 30.0%
AAGGAATCAAAAACCTTCAA+TGG - chr4_3:48713670-48713689 None:intergenic 30.0%
TAAATTTGTCTGAATGCTGT+AGG + chr4_3:48713733-48713752 Msa0644630:intron 30.0%
CATTGTATATATCACATGTG+TGG + chr4_3:48713967-48713986 Msa0644630:three_prime_UTR 30.0%
AAGTTACTCAAATCACATCA+GGG + chr4_3:48714046-48714065 Msa0644630:three_prime_UTR 30.0%
TTTGGTGAGTTTGTAGAATC+AGG - chr4_3:48706328-48706347 None:intergenic 35.0%
CAAATGATTGTTTGTGGAAG+AGG - chr4_3:48706505-48706524 None:intergenic 35.0%
AAGTACTTGCTTGGAATCTA+CGG - chr4_3:48706578-48706597 None:intergenic 35.0%
TGTTTATTCATCTTCTGGAC+AGG + chr4_3:48706644-48706663 Msa0644630:intron 35.0%
CCAAGAAAATTTCTCTTCGT+CGG - chr4_3:48706718-48706737 None:intergenic 35.0%
CTTATCTAATTCAATGCCTC+AGG - chr4_3:48706796-48706815 None:intergenic 35.0%
ACATGTTATGGAACCAATCA+AGG - chr4_3:48706996-48707015 None:intergenic 35.0%
TTTCAGTTCTGCACATGTTA+TGG - chr4_3:48707008-48707027 None:intergenic 35.0%
! ACTGAAAGTATGCAAGAGTA+AGG + chr4_3:48707021-48707040 Msa0644630:intron 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG + chr4_3:48707277-48707296 Msa0644630:intron 35.0%
ATACTAAACCCTCCTCATTT+GGG - chr4_3:48707292-48707311 None:intergenic 35.0%
AATACTAAACCCTCCTCATT+TGG - chr4_3:48707293-48707312 None:intergenic 35.0%
TGAAATAGAGGAAAATGGGA+GGG - chr4_3:48707346-48707365 None:intergenic 35.0%
ATGAAATAGAGGAAAATGGG+AGG - chr4_3:48707347-48707366 None:intergenic 35.0%
TGAGCAAATGGATGAAATAG+AGG - chr4_3:48707358-48707377 None:intergenic 35.0%
GGAAAAAAGGAATGAGCAAA+TGG - chr4_3:48707370-48707389 None:intergenic 35.0%
CAAACAAAGCGTAAGATTCT+TGG + chr4_3:48707422-48707441 Msa0644630:intron 35.0%
TACAGTAACCTCTCATTGTT+TGG - chr4_3:48707604-48707623 None:intergenic 35.0%
CAATGAGAGGTTACTGTAAT+TGG + chr4_3:48707606-48707625 Msa0644630:intron 35.0%
CCTTGAATTGAGAATGTACT+GGG + chr4_3:48707645-48707664 Msa0644630:intron 35.0%
CTTGAATTGAGAATGTACTG+GGG + chr4_3:48707646-48707665 Msa0644630:intron 35.0%
ACCACTCCAACAAAGAAAAT+GGG - chr4_3:48707728-48707747 None:intergenic 35.0%
TACCACTCCAACAAAGAAAA+TGG - chr4_3:48707729-48707748 None:intergenic 35.0%
ATGTGTTTGTGTTTGGTCAA+TGG - chr4_3:48707768-48707787 None:intergenic 35.0%
TTAACTGGTAAACATAGACC+AGG - chr4_3:48707938-48707957 None:intergenic 35.0%
AAGCTGAATGGAAGAAAGAT+TGG - chr4_3:48708182-48708201 None:intergenic 35.0%
AATCTTTCTTCCATTCAGCT+TGG + chr4_3:48708181-48708200 Msa0644630:five_prime_UTR 35.0%
! AAGCAAGATGTTTTCCAACT+AGG - chr4_3:48708229-48708248 None:intergenic 35.0%
TAATGTCAAACATAGGTCAG+TGG + chr4_3:48708302-48708321 Msa0644630:intron 35.0%
! AGCTTAATTTTGTACGCTGT+CGG - chr4_3:48708608-48708627 None:intergenic 35.0%
ATTTGGATAAAACACTAGGG+AGG + chr4_3:48708645-48708664 Msa0644630:intron 35.0%
ACTACCAAGTACATACAACA+GGG - chr4_3:48708693-48708712 None:intergenic 35.0%
TTACAAGCGAAATGAATTGC+AGG + chr4_3:48708841-48708860 Msa0644630:intron 35.0%
TTAATGATACTAGAGTCCCA+CGG - chr4_3:48708916-48708935 None:intergenic 35.0%
AAAAGAACTCTTCATCGTCT+TGG + chr4_3:48708934-48708953 Msa0644630:five_prime_UTR 35.0%
AAAGAACTCTTCATCGTCTT+GGG + chr4_3:48708935-48708954 Msa0644630:five_prime_UTR 35.0%
CTTAAGAGTTTACTGAGTTG+GGG + chr4_3:48709003-48709022 Msa0644630:intron 35.0%
!! ATGCAGTTGGGTTATTTTGT+GGG + chr4_3:48709037-48709056 Msa0644630:intron 35.0%
AGCTTTCAGATTAGTACAGT+AGG + chr4_3:48709061-48709080 Msa0644630:five_prime_UTR 35.0%
GCTTTCAGATTAGTACAGTA+GGG + chr4_3:48709062-48709081 Msa0644630:five_prime_UTR 35.0%
CTTTCAGATTAGTACAGTAG+GGG + chr4_3:48709063-48709082 Msa0644630:five_prime_UTR 35.0%
TTTCAGATTAGTACAGTAGG+GGG + chr4_3:48709064-48709083 Msa0644630:five_prime_UTR 35.0%
!! AGTTTCTTAGAGGTGTTTCA+GGG + chr4_3:48709346-48709365 Msa0644630:intron 35.0%
!! TGAAAGCATTCGTAATTGGT+GGG + chr4_3:48709377-48709396 Msa0644630:intron 35.0%
! TAGGTTGACCTGTTATCTAT+TGG - chr4_3:48709557-48709576 None:intergenic 35.0%
CCTGTAGTTAGTAATGACAT+CGG + chr4_3:48709849-48709868 Msa0644630:intron 35.0%
TCTGACAAGAAATAGTAGCA+AGG - chr4_3:48710153-48710172 None:intergenic 35.0%
ATTCTACTGTCCGAATTCTA+TGG - chr4_3:48710223-48710242 None:intergenic 35.0%
AGAATTCGGACAGTAGAATA+TGG + chr4_3:48710224-48710243 Msa0644630:intron 35.0%
GAATTCGGACAGTAGAATAT+GGG + chr4_3:48710225-48710244 Msa0644630:intron 35.0%
!!! TTTTTTTGGGTACAAGAGAG+GGG - chr4_3:48710354-48710373 None:intergenic 35.0%
TGCATCAACACTAAGGAAAA+TGG - chr4_3:48710391-48710410 None:intergenic 35.0%
TTTAAGCTGCATCAACACTA+AGG - chr4_3:48710398-48710417 None:intergenic 35.0%
GTGATTCATAAGAACGAATC+AGG + chr4_3:48710690-48710709 Msa0644630:intron 35.0%
ATTGATCCTTTGCCTTGTAA+AGG + chr4_3:48710898-48710917 Msa0644630:intron 35.0%
TTGATCCTTTGCCTTGTAAA+GGG + chr4_3:48710899-48710918 Msa0644630:intron 35.0%
TTGTAATCAGTCCCTTTACA+AGG - chr4_3:48710913-48710932 None:intergenic 35.0%
TGTAAAGGGACTGATTACAA+CGG + chr4_3:48710913-48710932 Msa0644630:intron 35.0%
CTAAATTAGCCCACCTAAAT+TGG - chr4_3:48711267-48711286 None:intergenic 35.0%
!! GATCTTGGCAGAATTTTAGT+TGG + chr4_3:48711472-48711491 Msa0644630:intron 35.0%
! GTTGTGAATTGAAGCATCTT+TGG + chr4_3:48711509-48711528 Msa0644630:intron 35.0%
CAAGGTCTTAGACAAAATTG+GGG - chr4_3:48711559-48711578 None:intergenic 35.0%
TAAGTATTACGGTCCTTTCA+AGG - chr4_3:48711577-48711596 None:intergenic 35.0%
TTGAAAGGACCGTAATACTT+AGG + chr4_3:48711576-48711595 Msa0644630:intron 35.0%
AAACTCCTGCCTAAGTATTA+CGG - chr4_3:48711588-48711607 None:intergenic 35.0%
AGTGATGAGAATTTCTCTGT+TGG - chr4_3:48711675-48711694 None:intergenic 35.0%
TCAGAACAGAATGAAACAAC+AGG - chr4_3:48711712-48711731 None:intergenic 35.0%
CGGAAGATAAGGTAAGTTTA+TGG + chr4_3:48711818-48711837 Msa0644630:intron 35.0%
TGTCCATATACTACCTCAAA+CGG + chr4_3:48711849-48711868 Msa0644630:intron 35.0%
! AACCATTTGGACCAATTTTG+AGG + chr4_3:48711927-48711946 Msa0644630:intron 35.0%
! GGACAGTTTTTCACTTTACA+AGG - chr4_3:48712056-48712075 None:intergenic 35.0%
AGTGAAAAACTGTCCAGAAT+TGG + chr4_3:48712061-48712080 Msa0644630:intron 35.0%
CTACATTTCTAAGCCAATTC+TGG - chr4_3:48712077-48712096 None:intergenic 35.0%
! CAGAATTGGCTTAGAAATGT+AGG + chr4_3:48712075-48712094 Msa0644630:intron 35.0%
ATTAAATGGTTACCAGACGA+AGG + chr4_3:48712243-48712262 Msa0644630:intron 35.0%
TTAAATGGTTACCAGACGAA+GGG + chr4_3:48712244-48712263 Msa0644630:intron 35.0%
ATCAGTACGGACTTTATTGA+AGG - chr4_3:48712276-48712295 None:intergenic 35.0%
GTCCAAATAAGTGAAGGAAT+TGG + chr4_3:48712300-48712319 Msa0644630:intron 35.0%
TCCCAATTCCTTCACTTATT+TGG - chr4_3:48712305-48712324 None:intergenic 35.0%
CTAAACCTTTCCAAAAGAAG+AGG + chr4_3:48712415-48712434 Msa0644630:intron 35.0%
AAACCTTTCCAAAAGAAGAG+GGG + chr4_3:48712417-48712436 Msa0644630:intron 35.0%
! AAATTAAGCCCCTCTTCTTT+TGG - chr4_3:48712428-48712447 None:intergenic 35.0%
GTCACACTCTAAATTCACTT+GGG - chr4_3:48712580-48712599 None:intergenic 35.0%
AGTCACACTCTAAATTCACT+TGG - chr4_3:48712581-48712600 None:intergenic 35.0%
! GTGAATTTAGAGTGTGACTA+TGG + chr4_3:48712582-48712601 Msa0644630:intron 35.0%
TTCAATGTCCGAAATGAGTT+CGG + chr4_3:48712611-48712630 Msa0644630:intron 35.0%
!! AAAGAGCATTAAGCACATTC+TGG - chr4_3:48712850-48712869 None:intergenic 35.0%
ATCATATGCGGTGCAAAAAT+GGG - chr4_3:48712916-48712935 None:intergenic 35.0%
TATCATATGCGGTGCAAAAA+TGG - chr4_3:48712917-48712936 None:intergenic 35.0%
!! ACCCAAAGATTTGCTAATGT+AGG + chr4_3:48712988-48713007 Msa0644630:intron 35.0%
GCCTACATTAGCAAATCTTT+GGG - chr4_3:48712992-48713011 None:intergenic 35.0%
TGCCTACATTAGCAAATCTT+TGG - chr4_3:48712993-48713012 None:intergenic 35.0%
!! GATTTGCTAATGTAGGCAAT+TGG + chr4_3:48712995-48713014 Msa0644630:intron 35.0%
ATCTTCTGAACTCAACGAAT+AGG - chr4_3:48710809-48710828 None:intergenic 35.0%
ACTATCACATAGTGAATCAG+AGG + chr4_3:48713333-48713352 Msa0644630:intron 35.0%
TCCATAACAGATACACACTA+GGG + chr4_3:48713396-48713415 Msa0644630:intron 35.0%
! TTGCAAGACATTGATAACCA+CGG + chr4_3:48713468-48713487 Msa0644630:intron 35.0%
! GAACCTTTTTCTCCTTTTTG+CGG + chr4_3:48713804-48713823 Msa0644630:CDS 35.0%
CTGATGTGATTTGAGTAACT+TGG - chr4_3:48714047-48714066 None:intergenic 35.0%
CAAGTTACTCAAATCACATC+AGG + chr4_3:48714045-48714064 Msa0644630:three_prime_UTR 35.0%
!! CATGGCTGTTTGTTATCTGT+TGG - chr4_3:48706288-48706307 None:intergenic 40.0%
AGTTTGTAGAATCAGGACTC+AGG - chr4_3:48706321-48706340 None:intergenic 40.0%
CTTATTCTTGCTGCCTCAAA+TGG + chr4_3:48706362-48706381 Msa0644630:five_prime_UTR 40.0%
!! GTTGTTGATGATGCCATTTG+AGG - chr4_3:48706378-48706397 None:intergenic 40.0%
TTGTGGAAGAGGAAGAAATG+AGG - chr4_3:48706494-48706513 None:intergenic 40.0%
TGGCGACAAATGATTGTTTG+TGG - chr4_3:48706511-48706530 None:intergenic 40.0%
AGTGGATAAGTGACATGTGT+TGG - chr4_3:48706531-48706550 None:intergenic 40.0%
GCAGTTTCTAAGTACTTGCT+TGG - chr4_3:48706587-48706606 None:intergenic 40.0%
! CCGACGAAGAGAAATTTTCT+TGG + chr4_3:48706715-48706734 Msa0644630:five_prime_UTR 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG + chr4_3:48707039-48707058 Msa0644630:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - chr4_3:48707257-48707276 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr4_3:48707258-48707277 None:intergenic 40.0%
TACTAAACCCTCCTCATTTG+GGG - chr4_3:48707291-48707310 None:intergenic 40.0%
GAAATAGAGGAAAATGGGAG+GGG - chr4_3:48707345-48707364 None:intergenic 40.0%
!! TTACGCTTTGTTTGCGAGTT+TGG - chr4_3:48707416-48707435 None:intergenic 40.0%
GCCTTGAATTGAGAATGTAC+TGG + chr4_3:48707644-48707663 Msa0644630:intron 40.0%
CCCAGTACATTCTCAATTCA+AGG - chr4_3:48707648-48707667 None:intergenic 40.0%
! ACCTTGCCCATTTTCTTTGT+TGG + chr4_3:48707719-48707738 Msa0644630:intron 40.0%
TCCAACAAAGAAAATGGGCA+AGG - chr4_3:48707723-48707742 None:intergenic 40.0%
AATACTTTGCTTCTACAGCG+AGG + chr4_3:48707803-48707822 Msa0644630:intron 40.0%
ATACTTTGCTTCTACAGCGA+GGG + chr4_3:48707804-48707823 Msa0644630:intron 40.0%
!! CTTTGAAATGTATGAGCTCC+TGG + chr4_3:48707917-48707936 Msa0644630:intron 40.0%
!! TAGGTTTGTTTTCCCTGCAT+TGG + chr4_3:48707980-48707999 Msa0644630:intron 40.0%
!! AGGTTTGTTTTCCCTGCATT+GGG + chr4_3:48707981-48708000 Msa0644630:intron 40.0%
!! TATGATATTGGTGCCACATC+CGG + chr4_3:48708020-48708039 Msa0644630:five_prime_UTR 40.0%
CACTACCAAGTACATACAAC+AGG - chr4_3:48708694-48708713 None:intergenic 40.0%
! CTGCTTTATGGACTTGGTAT+AGG + chr4_3:48708761-48708780 Msa0644630:five_prime_UTR 40.0%
! TTATGGACTTGGTATAGGTC+TGG + chr4_3:48708766-48708785 Msa0644630:five_prime_UTR 40.0%
AATGAATTGCAGGCTATGCA+TGG + chr4_3:48708851-48708870 Msa0644630:intron 40.0%
AAGAACTCTTCATCGTCTTG+GGG + chr4_3:48708936-48708955 Msa0644630:five_prime_UTR 40.0%
GACTGAACTATCATGCAGTT+GGG + chr4_3:48709025-48709044 Msa0644630:intron 40.0%
!! CATGCAGTTGGGTTATTTTG+TGG + chr4_3:48709036-48709055 Msa0644630:intron 40.0%
GAAAAGGCAATTGTTTCCCT+GGG + chr4_3:48709220-48709239 Msa0644630:five_prime_UTR 40.0%
TCAGATTCTTTGTCACCAAG+TGG - chr4_3:48709262-48709281 None:intergenic 40.0%
!! GAGTTTCTTAGAGGTGTTTC+AGG + chr4_3:48709345-48709364 Msa0644630:intron 40.0%
!! CTGAAAGCATTCGTAATTGG+TGG + chr4_3:48709376-48709395 Msa0644630:intron 40.0%
!! GAAAGCATTCGTAATTGGTG+GGG + chr4_3:48709378-48709397 Msa0644630:intron 40.0%
! AAAGCATTCGTAATTGGTGG+GGG + chr4_3:48709379-48709398 Msa0644630:intron 40.0%
! GGGGCTAGTATTATTTCAAC+AGG + chr4_3:48709399-48709418 Msa0644630:CDS 40.0%
CCTGCATAATACAGAACACT+AGG - chr4_3:48709576-48709595 None:intergenic 40.0%
CCTAGTGTTCTGTATTATGC+AGG + chr4_3:48709573-48709592 Msa0644630:CDS 40.0%
CCGATGTCATTACTAACTAC+AGG - chr4_3:48709852-48709871 None:intergenic 40.0%
TGTCCTAAAAGTGGACGATT+TGG + chr4_3:48709876-48709895 Msa0644630:CDS 40.0%
GTCCTAAAAGTGGACGATTT+GGG + chr4_3:48709877-48709896 Msa0644630:CDS 40.0%
TCCTAAAAGTGGACGATTTG+GGG + chr4_3:48709878-48709897 Msa0644630:CDS 40.0%
ATGACCAGAAAACCATTACC+TGG - chr4_3:48710127-48710146 None:intergenic 40.0%
!! GGTAATGGTTTTCTGGTCAT+TGG + chr4_3:48710127-48710146 Msa0644630:intron 40.0%
GAGTAGAGAGGTCTTTCAAT+CGG - chr4_3:48710263-48710282 None:intergenic 40.0%
ACCTCTCTACTCCTCAAAAA+GGG + chr4_3:48710271-48710290 Msa0644630:intron 40.0%
AAGGGTTCCTGATTAAGAAG+TGG - chr4_3:48710773-48710792 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG - chr4_3:48710945-48710964 None:intergenic 40.0%
! AAGGATGCTCTTTAAGGAGA+GGG - chr4_3:48711119-48711138 None:intergenic 40.0%
!! TTTCCTACTTTTCACCCTTG+AGG - chr4_3:48711144-48711163 None:intergenic 40.0%
GAAAAGTAGGAAAACGTTGC+AGG + chr4_3:48711151-48711170 Msa0644630:intron 40.0%
ATACTCCCAAGTAGTGGTAT+AGG + chr4_3:48711185-48711204 Msa0644630:intron 40.0%
GAAAGATACTCCACCTGAAA+TGG - chr4_3:48711322-48711341 None:intergenic 40.0%
AATTGCTGCTACCAAAGTTC+TGG - chr4_3:48711352-48711371 None:intergenic 40.0%
! GTGCATTTTAGACAGGAAGA+TGG - chr4_3:48711388-48711407 None:intergenic 40.0%
! CTTCCTGTCTAAAATGCACT+CGG + chr4_3:48711389-48711408 Msa0644630:intron 40.0%
! TTCCTGTCTAAAATGCACTC+GGG + chr4_3:48711390-48711409 Msa0644630:intron 40.0%
! TTATGGACTGTTGCTGTGTT+GGG + chr4_3:48711450-48711469 Msa0644630:intron 40.0%
! TGTTCTGAGCCTGTAATAGA+TGG + chr4_3:48711724-48711743 Msa0644630:intron 40.0%
GGGTGAATCAACGAATATGA+GGG - chr4_3:48711799-48711818 None:intergenic 40.0%
!! CTCATATTCGTTGATTCACC+CGG + chr4_3:48711798-48711817 Msa0644630:intron 40.0%
TAAGGTAAGTTTATGGGGAG+AGG + chr4_3:48711825-48711844 Msa0644630:intron 40.0%
! ACTCCGTTTGAGGTAGTATA+TGG - chr4_3:48711855-48711874 None:intergenic 40.0%
ATATACTACCTCAAACGGAG+TGG + chr4_3:48711854-48711873 Msa0644630:intron 40.0%
AATTCAATCCACTCCGTTTG+AGG - chr4_3:48711865-48711884 None:intergenic 40.0%
! AATGGTTATCACTGGCTGAA+TGG - chr4_3:48711914-48711933 None:intergenic 40.0%
TTCAGCCAGTGATAACCATT+TGG + chr4_3:48711914-48711933 Msa0644630:intron 40.0%
TTGGTCCAAATGGTTATCAC+TGG - chr4_3:48711922-48711941 None:intergenic 40.0%
AGCCTCAAAATTGGTCCAAA+TGG - chr4_3:48711932-48711951 None:intergenic 40.0%
CTTATCTTCGATGCTGTGTT+CGG - chr4_3:48711958-48711977 None:intergenic 40.0%
! GTTTTTCACTTTACAAGGGG+TGG - chr4_3:48712051-48712070 None:intergenic 40.0%
TAAATGGTTACCAGACGAAG+GGG + chr4_3:48712245-48712264 Msa0644630:intron 40.0%
ATAAGTGAAGGAATTGGGAG+TGG + chr4_3:48712306-48712325 Msa0644630:intron 40.0%
CAGTAATATCTCGACCAGAA+TGG + chr4_3:48712454-48712473 Msa0644630:intron 40.0%
TCTAAATTCACTTGGGTACG+AGG - chr4_3:48712573-48712592 None:intergenic 40.0%
GTCCATAACCGAACTCATTT+CGG - chr4_3:48712622-48712641 None:intergenic 40.0%
GAAATGAGTTCGGTTATGGA+CGG + chr4_3:48712621-48712640 Msa0644630:intron 40.0%
TCATATGCGGTGCAAAAATG+GGG - chr4_3:48712915-48712934 None:intergenic 40.0%
GTGTTTGTCTTGCATCAAGA+CGG + chr4_3:48713018-48713037 Msa0644630:intron 40.0%
TCAGTCCCTTTATAAGGCAA+AGG - chr4_3:48713144-48713163 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG - chr4_3:48710945-48710964 None:intergenic 40.0%
TGTTGAGCTGTCAAATGAAG+AGG - chr4_3:48713191-48713210 None:intergenic 40.0%
ATCATAATGAATCGGAGGTC+AGG + chr4_3:48713361-48713380 Msa0644630:intron 40.0%
GTCCATAACAGATACACACT+AGG + chr4_3:48713395-48713414 Msa0644630:intron 40.0%
TCCCTAGTGTGTATCTGTTA+TGG - chr4_3:48713400-48713419 None:intergenic 40.0%
TACGGTAATACTTTAAGCCG+TGG - chr4_3:48713488-48713507 None:intergenic 40.0%
TATCATTTGGGCCGATAAGT+TGG + chr4_3:48713539-48713558 Msa0644630:CDS 40.0%
GATACCATCAGCCAACTTAT+CGG - chr4_3:48713553-48713572 None:intergenic 40.0%
TGCAAAGGTAACAACAGCAT+TGG - chr4_3:48713641-48713660 None:intergenic 40.0%
CTTCAATGGTGAGAATGCAA+AGG - chr4_3:48713656-48713675 None:intergenic 40.0%
CTTTGCATTCTCACCATTGA+AGG + chr4_3:48713654-48713673 Msa0644630:CDS 40.0%
CACAAGTGACACTAATGCAA+TGG - chr4_3:48713830-48713849 None:intergenic 40.0%
!! CTGCTGTCACTTCAAGATTT+TGG - chr4_3:48713908-48713927 None:intergenic 40.0%
GAAGAGTGAGAGGTAAGAAG+TGG - chr4_3:48706549-48706568 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr4_3:48707043-48707062 Msa0644630:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr4_3:48707044-48707063 Msa0644630:intron 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - chr4_3:48707256-48707275 None:intergenic 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG + chr4_3:48707280-48707299 Msa0644630:intron 45.0%
TTAGTTCCCCCAAATGAGGA+GGG + chr4_3:48707281-48707300 Msa0644630:intron 45.0%
ACTAAACCCTCCTCATTTGG+GGG - chr4_3:48707290-48707309 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr4_3:48707044-48707063 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr4_3:48707043-48707062 None:intergenic 45.0%
! GCCCATTTTCTTTGTTGGAG+TGG + chr4_3:48707724-48707743 Msa0644630:intron 45.0%
!! TTTGTTTTCCCTGCATTGGG+TGG + chr4_3:48707984-48708003 Msa0644630:five_prime_UTR 45.0%
! TGAAATTGTAGCACCGGATG+TGG - chr4_3:48708036-48708055 None:intergenic 45.0%
CTGCAGTGAAATTGTAGCAC+CGG - chr4_3:48708042-48708061 None:intergenic 45.0%
!! TTCCATTCAGCTTGGTCTTG+TGG + chr4_3:48708189-48708208 Msa0644630:five_prime_UTR 45.0%
TACCACAAGACCAAGCTGAA+TGG - chr4_3:48708194-48708213 None:intergenic 45.0%
GTAGTTCAGTTTCTGCCTTC+TGG - chr4_3:48708413-48708432 None:intergenic 45.0%
GCTAAGAGAACACCAAGTTC+TGG - chr4_3:48708734-48708753 None:intergenic 45.0%
!! GAACTTGGTGTTCTCTTAGC+AGG + chr4_3:48708734-48708753 Msa0644630:five_prime_UTR 45.0%
! TTGGTGTTCTCTTAGCAGGA+AGG + chr4_3:48708738-48708757 Msa0644630:five_prime_UTR 45.0%
! TTAGCAGGAAGGCTGCTTTA+TGG + chr4_3:48708749-48708768 Msa0644630:five_prime_UTR 45.0%
ACTTGTCCATCACAAATCCG+TGG + chr4_3:48708896-48708915 Msa0644630:five_prime_UTR 45.0%
CTTGTCCATCACAAATCCGT+GGG + chr4_3:48708897-48708916 Msa0644630:five_prime_UTR 45.0%
GGACTGAACTATCATGCAGT+TGG + chr4_3:48709024-48709043 Msa0644630:intron 45.0%
AGATTAGTACAGTAGGGGGA+TGG + chr4_3:48709068-48709087 Msa0644630:five_prime_UTR 45.0%
!! TGCTCCACTTGCTGTGTTAA+TGG + chr4_3:48709111-48709130 Msa0644630:five_prime_UTR 45.0%
!! GCTCCACTTGCTGTGTTAAT+GGG + chr4_3:48709112-48709131 Msa0644630:five_prime_UTR 45.0%
AGTCCCATTAACACAGCAAG+TGG - chr4_3:48709118-48709137 None:intergenic 45.0%
! CTTGCTGTGTTAATGGGACT+CGG + chr4_3:48709118-48709137 Msa0644630:five_prime_UTR 45.0%
TTGCTTCTCAAAGCCGTACA+AGG + chr4_3:48709172-48709191 Msa0644630:five_prime_UTR 45.0%
CTCAAAGCCGTACAAGGAAA+AGG + chr4_3:48709178-48709197 Msa0644630:five_prime_UTR 45.0%
GGAAAAGGCAATTGTTTCCC+TGG + chr4_3:48709219-48709238 Msa0644630:five_prime_UTR 45.0%
TTGTTTCCCTGGGCAAACTA+AGG + chr4_3:48709230-48709249 Msa0644630:five_prime_UTR 45.0%
TGTTTCCCTGGGCAAACTAA+GGG + chr4_3:48709231-48709250 Msa0644630:five_prime_UTR 45.0%
ATTCTTTGTCACCAAGTGGC+CGG - chr4_3:48709258-48709277 None:intergenic 45.0%
GAAGTCTGCCTATGAAGATC+AGG + chr4_3:48709312-48709331 Msa0644630:exon 45.0%
CTCGGATTCCTGATCTTCAT+AGG - chr4_3:48709323-48709342 None:intergenic 45.0%
CTATGAAGATCAGGAATCCG+AGG + chr4_3:48709321-48709340 Msa0644630:exon 45.0%
AAGCATTCGTAATTGGTGGG+GGG + chr4_3:48709380-48709399 Msa0644630:intron 45.0%
TTATGCAGGTCCCATTCTTC+AGG + chr4_3:48709587-48709606 Msa0644630:CDS 45.0%
ATCGGTTGCTGTCCTAAAAG+TGG + chr4_3:48709867-48709886 Msa0644630:CDS 45.0%
!! TCCCCAAATCGTCCACTTTT+AGG - chr4_3:48709882-48709901 None:intergenic 45.0%
! TCTTTACGTTGGTTGCTACC+AGG + chr4_3:48710106-48710125 Msa0644630:CDS 45.0%
!! GCTACCAGGTAATGGTTTTC+TGG + chr4_3:48710120-48710139 Msa0644630:intron 45.0%
GACCTCTCTACTCCTCAAAA+AGG + chr4_3:48710270-48710289 Msa0644630:intron 45.0%
!! TCCCTTTTTGAGGAGTAGAG+AGG - chr4_3:48710275-48710294 None:intergenic 45.0%
TCAGTCCCTTTACAAGGCAA+AGG - chr4_3:48710907-48710926 None:intergenic 45.0%
AAGGGACTGATTACAACGGT+TGG + chr4_3:48710917-48710936 Msa0644630:intron 45.0%
TGTCGAGCTGTCAAATGAAG+AGG - chr4_3:48710954-48710973 None:intergenic 45.0%
! CAAGGATGCTCTTTAAGGAG+AGG - chr4_3:48711120-48711139 None:intergenic 45.0%
GAGGTCAAGGATGCTCTTTA+AGG - chr4_3:48711125-48711144 None:intergenic 45.0%
!! AAAGAGCATCCTTGACCTCA+AGG + chr4_3:48711126-48711145 Msa0644630:intron 45.0%
!! AAGAGCATCCTTGACCTCAA+GGG + chr4_3:48711127-48711146 Msa0644630:intron 45.0%
! ACTTTTCACCCTTGAGGTCA+AGG - chr4_3:48711138-48711157 None:intergenic 45.0%
TGACCTCAAGGGTGAAAAGT+AGG + chr4_3:48711138-48711157 Msa0644630:intron 45.0%
CCAAGCCTATACCACTACTT+GGG - chr4_3:48711193-48711212 None:intergenic 45.0%
CCAAGTAGTGGTATAGGCTT+GGG + chr4_3:48711191-48711210 Msa0644630:intron 45.0%
! TCTCTGGTGCCAATTTAGGT+GGG + chr4_3:48711255-48711274 Msa0644630:intron 45.0%
AACTCCCAAGTAGCCATTTC+AGG + chr4_3:48711306-48711325 Msa0644630:intron 45.0%
TCCACCTGAAATGGCTACTT+GGG - chr4_3:48711313-48711332 None:intergenic 45.0%
TTTCCACTGGACCAGAACTT+TGG + chr4_3:48711338-48711357 Msa0644630:intron 45.0%
! TCCTGTCTAAAATGCACTCG+GGG + chr4_3:48711391-48711410 Msa0644630:intron 45.0%
AGCAACAGTCCATAACATCC+CGG - chr4_3:48711445-48711464 None:intergenic 45.0%
! GTTATGGACTGTTGCTGTGT+TGG + chr4_3:48711449-48711468 Msa0644630:intron 45.0%
CATCTTTGGGTAGCTCCAAT+TGG + chr4_3:48711523-48711542 Msa0644630:intron 45.0%
AAGGACCGTAATACTTAGGC+AGG + chr4_3:48711580-48711599 Msa0644630:intron 45.0%
TCCTCAAGTTACACCCTTAC+AGG - chr4_3:48711641-48711660 None:intergenic 45.0%
CGGGTGAATCAACGAATATG+AGG - chr4_3:48711800-48711819 None:intergenic 45.0%
! GTTGATTCACCCGGAAGATA+AGG + chr4_3:48711807-48711826 Msa0644630:intron 45.0%
GTTCGGAGAAGCCTCAAAAT+TGG - chr4_3:48711941-48711960 None:intergenic 45.0%
CTTATCACCCTCAAACCGAT+GGG - chr4_3:48712010-48712029 None:intergenic 45.0%
GGCTTAGAAATGTAGGGTCA+CGG + chr4_3:48712082-48712101 Msa0644630:intron 45.0%
CGGTCACTGGTGATTGAATT+AGG + chr4_3:48712102-48712121 Msa0644630:intron 45.0%
! GGATGTGGCACAAGTTTTCT+TGG - chr4_3:48712154-48712173 None:intergenic 45.0%
CCACATCCAATGCCGAATAA+GGG + chr4_3:48712166-48712185 Msa0644630:intron 45.0%
! TCCTTTGGCTCACCCTTATT+CGG - chr4_3:48712181-48712200 None:intergenic 45.0%
GGAGTGGTTGAAGTAAACCA+GGG + chr4_3:48712322-48712341 Msa0644630:intron 45.0%
GAGTGGTTGAAGTAAACCAG+GGG + chr4_3:48712323-48712342 Msa0644630:intron 45.0%
!! AAGCCCCTCTTCTTTTGGAA+AGG - chr4_3:48712423-48712442 None:intergenic 45.0%
CGAGGTGAACTCAGAAGAAA+AGG - chr4_3:48712555-48712574 None:intergenic 45.0%
GTCCGAAATGAGTTCGGTTA+TGG + chr4_3:48712617-48712636 Msa0644630:intron 45.0%
GCTTGGGTGTCCAAATTGAT+GGG - chr4_3:48712798-48712817 None:intergenic 45.0%
GTTGAACACTCCCTTTCAAC+AGG - chr4_3:48712820-48712839 None:intergenic 45.0%
!! ACAGATAGAGCTTGTTGTCG+TGG + chr4_3:48712965-48712984 Msa0644630:intron 45.0%
TCTGTGTTGAATTCCACTGC+AGG + chr4_3:48713765-48713784 Msa0644630:intron 45.0%
!! ATTCCACTGCAGGAGTATCT+TGG + chr4_3:48713775-48713794 Msa0644630:intron 45.0%
TGGCCGCAAAAAGGAGAAAA+AGG - chr4_3:48713810-48713829 None:intergenic 45.0%
CTAATGCAATGGCCGCAAAA+AGG - chr4_3:48713819-48713838 None:intergenic 45.0%
ACTTCTGTCCCAGAGACAAA+AGG + chr4_3:48713859-48713878 Msa0644630:CDS 45.0%
! AGCTCAAGCCTTTTGTCTCT+GGG - chr4_3:48713870-48713889 None:intergenic 45.0%
! AAGCTCAAGCCTTTTGTCTC+TGG - chr4_3:48713871-48713890 None:intergenic 45.0%
!!! TTTATTTTAATGTATTAATT+TGG + chr4_3:48708628-48708647 Msa0644630:intron 5.0%
!!! TAATAAGTTATTTTTATAAA+AGG + chr4_3:48713098-48713117 Msa0644630:intron 5.0%
!!! AATAAGTTATTTTTATAAAA+GGG + chr4_3:48713099-48713118 Msa0644630:intron 5.0%
GACTCAGGAGTGAGGAATCA+TGG - chr4_3:48706306-48706325 None:intergenic 50.0%
AGAATCAGGACTCAGGAGTG+AGG - chr4_3:48706314-48706333 None:intergenic 50.0%
GAAGAGGAAGAAATGAGGCG+TGG - chr4_3:48706489-48706508 None:intergenic 50.0%
ACGGTGATGAGAAGAGTGAG+AGG - chr4_3:48706559-48706578 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr4_3:48707042-48707061 Msa0644630:intron 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - chr4_3:48707254-48707273 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - chr4_3:48707255-48707274 None:intergenic 50.0%
! AAATGGGAGGGGAGGGTTTT+GGG - chr4_3:48707334-48707353 None:intergenic 50.0%
! AAAATGGGAGGGGAGGGTTT+TGG - chr4_3:48707335-48707354 None:intergenic 50.0%
TAGAGGAAAATGGGAGGGGA+GGG - chr4_3:48707341-48707360 None:intergenic 50.0%
ATAGAGGAAAATGGGAGGGG+AGG - chr4_3:48707342-48707361 None:intergenic 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG - chr4_3:48707383-48707402 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr4_3:48707406-48707425 None:intergenic 50.0%
!! CGCTTTGTTTGCGAGTTTGG+AGG - chr4_3:48707413-48707432 None:intergenic 50.0%
ATAGCAAGCCACCCAATGCA+GGG - chr4_3:48707995-48708014 None:intergenic 50.0%
AATAGCAAGCCACCCAATGC+AGG - chr4_3:48707996-48708015 None:intergenic 50.0%
!! GCATTGGGTGGCTTGCTATT+TGG + chr4_3:48707996-48708015 Msa0644630:five_prime_UTR 50.0%
!! CGGTGCTACAATTTCACTGC+AGG + chr4_3:48708040-48708059 Msa0644630:five_prime_UTR 50.0%
TCACAGTCACCTGAGCTTAG+CGG + chr4_3:48708145-48708164 Msa0644630:intron 50.0%
TAGGTCAGTGGTTCCCTCTA+TGG + chr4_3:48708314-48708333 Msa0644630:intron 50.0%
AGGTCAGTGGTTCCCTCTAT+GGG + chr4_3:48708315-48708334 Msa0644630:intron 50.0%
GCAGCCCTGTTGTATGTACT+TGG + chr4_3:48708686-48708705 Msa0644630:five_prime_UTR 50.0%
! AACACCAAGTTCTGGTGCTG+TGG - chr4_3:48708726-48708745 None:intergenic 50.0%
! GGAAGGCTGCTTTATGGACT+TGG + chr4_3:48708755-48708774 Msa0644630:five_prime_UTR 50.0%
AGAGTCCCACGGATTTGTGA+TGG - chr4_3:48708905-48708924 None:intergenic 50.0%
CTTCATCGTCTTGGGGATTC+TGG + chr4_3:48708943-48708962 Msa0644630:five_prime_UTR 50.0%
TTAGTACAGTAGGGGGATGG+AGG + chr4_3:48709071-48709090 Msa0644630:five_prime_UTR 50.0%
AAGCAACCACCGAGGAGATT+CGG - chr4_3:48709158-48709177 None:intergenic 50.0%
GTTTCCCTGGGCAAACTAAG+GGG + chr4_3:48709232-48709251 Msa0644630:five_prime_UTR 50.0%
AGGCAGACTTCAACGAGACA+AGG - chr4_3:48709303-48709322 None:intergenic 50.0%
ATCCGAGGCGAGTTTCTTAG+AGG + chr4_3:48709336-48709355 Msa0644630:intron 50.0%
! CACCTCTAAGAAACTCGCCT+CGG - chr4_3:48709341-48709360 None:intergenic 50.0%
! ATTTTCTGCTGCAGCTGACG+CGG + chr4_3:48709713-48709732 Msa0644630:CDS 50.0%
! AGAAGACCTCTGCTGATTGG+AGG + chr4_3:48709901-48709920 Msa0644630:CDS 50.0%
! GGCTGCCAATTGTTGCTGTT+GGG + chr4_3:48710075-48710094 Msa0644630:CDS 50.0%
! GCTGCCAATTGTTGCTGTTG+GGG + chr4_3:48710076-48710095 Msa0644630:CDS 50.0%
AACGCCCCAACAGCAACAAT+TGG - chr4_3:48710083-48710102 None:intergenic 50.0%
! CGTTGGTTGCTACCAGGTAA+TGG + chr4_3:48710112-48710131 Msa0644630:intron 50.0%
! TGCTAGGCTCTCCCTTTTTG+AGG - chr4_3:48710285-48710304 None:intergenic 50.0%
GGGTACAAGAGAGGGGAAAA+TGG - chr4_3:48710347-48710366 None:intergenic 50.0%
CCCAAGTAGTGGTATAGGCT+TGG + chr4_3:48711190-48711209 Msa0644630:intron 50.0%
CCCAAGCCTATACCACTACT+TGG - chr4_3:48711194-48711213 None:intergenic 50.0%
! CTCTCTGGTGCCAATTTAGG+TGG + chr4_3:48711254-48711273 Msa0644630:intron 50.0%
TCCCAAGTAGCCATTTCAGG+TGG + chr4_3:48711309-48711328 Msa0644630:intron 50.0%
CTCCACCTGAAATGGCTACT+TGG - chr4_3:48711314-48711333 None:intergenic 50.0%
! CAGGTGGAGTATCTTTCCAC+TGG + chr4_3:48711325-48711344 Msa0644630:intron 50.0%
! CTACCAAAGTTCTGGTCCAG+TGG - chr4_3:48711344-48711363 None:intergenic 50.0%
GACAGGAAGATGGTCAAGAG+AGG - chr4_3:48711378-48711397 None:intergenic 50.0%
! TCCCCGAGTGCATTTTAGAC+AGG - chr4_3:48711395-48711414 None:intergenic 50.0%
ACATGAACCCCGGGATGTTA+TGG + chr4_3:48711433-48711452 Msa0644630:intron 50.0%
CAACAGTCCATAACATCCCG+GGG - chr4_3:48711443-48711462 None:intergenic 50.0%
GCAACAGTCCATAACATCCC+GGG - chr4_3:48711444-48711463 None:intergenic 50.0%
CTGTTGCTGTGTTGGGATCT+TGG + chr4_3:48711457-48711476 Msa0644630:intron 50.0%
! GCCTGTAAGGGTGTAACTTG+AGG + chr4_3:48711637-48711656 Msa0644630:intron 50.0%
! GGTTATCACTGGCTGAATGG+TGG - chr4_3:48711911-48711930 None:intergenic 50.0%
TTCACACTCTGTCTGCCCAT+CGG + chr4_3:48711992-48712011 Msa0644630:intron 50.0%
GCTTATCACCCTCAAACCGA+TGG - chr4_3:48712011-48712030 None:intergenic 50.0%
AAATGTAGGGTCACGGTCAC+TGG + chr4_3:48712089-48712108 Msa0644630:intron 50.0%
GCCACATCCAATGCCGAATA+AGG + chr4_3:48712165-48712184 Msa0644630:intron 50.0%
! CCCTTATTCGGCATTGGATG+TGG - chr4_3:48712169-48712188 None:intergenic 50.0%
GGGAGTGGTTGAAGTAAACC+AGG + chr4_3:48712321-48712340 Msa0644630:intron 50.0%
CTTCATTCTTCAGCAGCTGG+AGG - chr4_3:48712480-48712499 None:intergenic 50.0%
TGGCTTCATTCTTCAGCAGC+TGG - chr4_3:48712483-48712502 None:intergenic 50.0%
! AAAGGACGGTGCTGAACTCA+TGG - chr4_3:48712712-48712731 None:intergenic 50.0%
GATGCCTTGTCTCGAAAGGA+CGG - chr4_3:48712726-48712745 None:intergenic 50.0%
AGCTGATGCCTTGTCTCGAA+AGG - chr4_3:48712730-48712749 None:intergenic 50.0%
GGCTTGGGTGTCCAAATTGA+TGG - chr4_3:48712799-48712818 None:intergenic 50.0%
GACACCCAAGCCTGTTGAAA+GGG + chr4_3:48712807-48712826 Msa0644630:intron 50.0%
CACTCCCTTTCAACAGGCTT+GGG - chr4_3:48712814-48712833 None:intergenic 50.0%
ACACTCCCTTTCAACAGGCT+TGG - chr4_3:48712815-48712834 None:intergenic 50.0%
ATCTTCCCACTTCGCACTAG+AGG + chr4_3:48713577-48713596 Msa0644630:CDS 50.0%
! TAGAGGACGGGGGATTAGTA+TGG + chr4_3:48713594-48713613 Msa0644630:CDS 50.0%
!! AACAGCATTGGCAGCGAAGT+TGG - chr4_3:48713629-48713648 None:intergenic 50.0%
TTCTGGACAGGTTCAAGCGC+AGG + chr4_3:48706656-48706675 Msa0644630:intron 55.0%
TGTTTGCGAGTTTGGAGGGG+AGG + chr4_3:48707047-48707066 Msa0644630:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+GGG + chr4_3:48707048-48707067 Msa0644630:intron 55.0%
TTTGCGAGTTTGGAGGGGAG+GGG + chr4_3:48707049-48707068 Msa0644630:intron 55.0%
AGGGGAAGGGAAGGCTTCTA+GGG + chr4_3:48707067-48707086 Msa0644630:intron 55.0%
!!! GGTTTTGGGGGGGTTTTGGA+GGG - chr4_3:48707243-48707262 None:intergenic 55.0%
!!! ATTGGAGGAGGGTTTTGGGG+GGG - chr4_3:48707253-48707272 None:intergenic 55.0%
! AATGGGAGGGGAGGGTTTTG+GGG - chr4_3:48707333-48707352 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr4_3:48707048-48707067 None:intergenic 55.0%
GGTCAGTGGTTCCCTCTATG+GGG + chr4_3:48708316-48708335 Msa0644630:intron 55.0%
TCCCTCTATGGGGCTCTTCT+TGG + chr4_3:48708326-48708345 Msa0644630:five_prime_UTR 55.0%
GCCAAGAAGAGCCCCATAGA+GGG - chr4_3:48708330-48708349 None:intergenic 55.0%
AGCCAAGAAGAGCCCCATAG+AGG - chr4_3:48708331-48708350 None:intergenic 55.0%
GGGAGGAAGCGACAACTCAT+CGG + chr4_3:48708662-48708681 Msa0644630:intron 55.0%
ACTGCCACAGCACCAGAACT+TGG + chr4_3:48708719-48708738 Msa0644630:five_prime_UTR 55.0%
GGGGGATGGAGGTTCATGTA+TGG + chr4_3:48709082-48709101 Msa0644630:five_prime_UTR 55.0%
AGCAACCACCGAGGAGATTC+GGG - chr4_3:48709157-48709176 None:intergenic 55.0%
!! GCTTTGAGAAGCAACCACCG+AGG - chr4_3:48709166-48709185 None:intergenic 55.0%
GGGAGAAGACCTCTGCTGAT+TGG + chr4_3:48709898-48709917 Msa0644630:CDS 55.0%
CTGACACCTCCAATCAGCAG+AGG - chr4_3:48709910-48709929 None:intergenic 55.0%
!! CTGCTGATTGGAGGTGTCAG+TGG + chr4_3:48709910-48709929 Msa0644630:CDS 55.0%
!! GGAGGTGTCAGTGGCATTGT+AGG + chr4_3:48709919-48709938 Msa0644630:intron 55.0%
GGGCTGCCAATTGTTGCTGT+TGG + chr4_3:48710074-48710093 Msa0644630:CDS 55.0%
!! GGGGCGTTGCTTCTTTACGT+TGG + chr4_3:48710095-48710114 Msa0644630:CDS 55.0%
AGTGGTATAGGCTTGGGACC+TGG + chr4_3:48711197-48711216 Msa0644630:intron 55.0%
GTGGTATAGGCTTGGGACCT+GGG + chr4_3:48711198-48711217 Msa0644630:intron 55.0%
TCGAACCTGAGACCTTGAGG+AGG - chr4_3:48711232-48711251 None:intergenic 55.0%
TGGGGCTGCAGCTTACCAAT+TGG - chr4_3:48711541-48711560 None:intergenic 55.0%
GTGAAAGTGAGCCTTGCGCA+AGG + chr4_3:48711608-48711627 Msa0644630:intron 55.0%
!! GCAAGGAGTGCTGCCTGTAA+GGG + chr4_3:48711625-48711644 Msa0644630:intron 55.0%
!! TCTGTCTGCCCATCGGTTTG+AGG + chr4_3:48711999-48712018 Msa0644630:intron 55.0%
!! CTGTCTGCCCATCGGTTTGA+GGG + chr4_3:48712000-48712019 Msa0644630:intron 55.0%
GGCTCACCCTTATTCGGCAT+TGG - chr4_3:48712175-48712194 None:intergenic 55.0%
GCCGAATAAGGGTGAGCCAA+AGG + chr4_3:48712177-48712196 Msa0644630:intron 55.0%
GAAGGATTGTCCCCTTCGTC+TGG - chr4_3:48712258-48712277 None:intergenic 55.0%
CCTGATTTAGCTGCATCCCC+TGG - chr4_3:48712342-48712361 None:intergenic 55.0%
CCAGGGGATGCAGCTAAATC+AGG + chr4_3:48712339-48712358 Msa0644630:intron 55.0%
AGCACCGTCCTTTCGAGACA+AGG + chr4_3:48712719-48712738 Msa0644630:intron 55.0%
! CAAGGCATCAGCTGCAGTCT+TGG + chr4_3:48712737-48712756 Msa0644630:intron 55.0%
GGACACCCAAGCCTGTTGAA+AGG + chr4_3:48712806-48712825 Msa0644630:intron 55.0%
! TGGGCCGATAAGTTGGCTGA+TGG + chr4_3:48713546-48713565 Msa0644630:CDS 55.0%
TCCCACTTCGCACTAGAGGA+CGG + chr4_3:48713581-48713600 Msa0644630:CDS 55.0%
GCTCCAAGATACTCCTGCAG+TGG - chr4_3:48713781-48713800 None:intergenic 55.0%
GAGTTTGGAGGGGAGGGGAA+GGG + chr4_3:48707054-48707073 Msa0644630:intron 60.0%
GAGGGGAAGGGAAGGCTTCT+AGG + chr4_3:48707066-48707085 Msa0644630:intron 60.0%
GGGGAAGGGAAGGCTTCTAG+GGG + chr4_3:48707068-48707087 Msa0644630:intron 60.0%
! GAAGGGAAGGCTTCTAGGGG+TGG + chr4_3:48707071-48707090 Msa0644630:intron 60.0%
!!! GGGTTTTGGGGGGGTTTTGG+AGG - chr4_3:48707244-48707263 None:intergenic 60.0%
!!! GGAGGGTTTTGGGGGGGTTT+TGG - chr4_3:48707247-48707266 None:intergenic 60.0%
!! ATGGGAGGGGAGGGTTTTGG+GGG - chr4_3:48707332-48707351 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr4_3:48707401-48707420 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr4_3:48707402-48707421 None:intergenic 60.0%
CAAGCGACACCGCTAAGCTC+AGG - chr4_3:48708157-48708176 None:intergenic 60.0%
!! CTGAGCTTAGCGGTGTCGCT+TGG + chr4_3:48708155-48708174 Msa0644630:five_prime_UTR 60.0%
CGACTCTCCCCGAATCTCCT+CGG + chr4_3:48709146-48709165 Msa0644630:five_prime_UTR 60.0%
GCAACCACCGAGGAGATTCG+GGG - chr4_3:48709156-48709175 None:intergenic 60.0%
AAACTAAGGGGCCGGCCACT+TGG + chr4_3:48709244-48709263 Msa0644630:five_prime_UTR 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - chr4_3:48711218-48711237 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr4_3:48711217-48711236 Msa0644630:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + chr4_3:48711224-48711243 Msa0644630:intron 60.0%
GGTGGCTGAGACATGAACCC+CGG + chr4_3:48711423-48711442 Msa0644630:intron 60.0%
GTGGCTGAGACATGAACCCC+GGG + chr4_3:48711424-48711443 Msa0644630:intron 60.0%
!! CGCAAGGAGTGCTGCCTGTA+AGG + chr4_3:48711624-48711643 Msa0644630:intron 60.0%
TCAGCAGCTGGAGGCCATTC+TGG - chr4_3:48712471-48712490 None:intergenic 60.0%
CCCGTCCTCTAGTGCGAAGT+GGG - chr4_3:48713585-48713604 None:intergenic 60.0%
CCCACTTCGCACTAGAGGAC+GGG + chr4_3:48713582-48713601 Msa0644630:CDS 60.0%
CCACTTCGCACTAGAGGACG+GGG + chr4_3:48713583-48713602 Msa0644630:CDS 60.0%
CACTTCGCACTAGAGGACGG+GGG + chr4_3:48713584-48713603 Msa0644630:CDS 60.0%
CGAGTTTGGAGGGGAGGGGA+AGG + chr4_3:48707053-48707072 Msa0644630:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG + chr4_3:48707058-48707077 Msa0644630:intron 65.0%
!!! TGGGAGGGGAGGGTTTTGGG+GGG - chr4_3:48707331-48707350 None:intergenic 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG - chr4_3:48707391-48707410 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG - chr4_3:48707397-48707416 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr4_3:48707403-48707422 None:intergenic 65.0%
CTCTCCCCGAATCTCCTCGG+TGG + chr4_3:48709149-48709168 Msa0644630:five_prime_UTR 65.0%
!! CCGGCCCCTTAGTTTGCCCA+GGG - chr4_3:48709239-48709258 None:intergenic 65.0%
CCCTGGGCAAACTAAGGGGC+CGG + chr4_3:48709236-48709255 Msa0644630:five_prime_UTR 65.0%
CAGGCAGCACTCCTTGCGCA+AGG - chr4_3:48711622-48711641 None:intergenic 65.0%
CCCCGTCCTCTAGTGCGAAG+TGG - chr4_3:48713586-48713605 None:intergenic 65.0%
GGGGAAGGGAGGGGAAGGCT+TGG - chr4_3:48707392-48707411 None:intergenic 70.0%
!! GCCGGCCCCTTAGTTTGCCC+AGG - chr4_3:48709240-48709259 None:intergenic 70.0%
ATGCACTCGGGGACGCGAGC+AGG + chr4_3:48711402-48711421 Msa0644630:intron 70.0%
CACTCGGGGACGCGAGCAGG+TGG + chr4_3:48711405-48711424 Msa0644630:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 48706254 48714172 48706254 ID=Msa0644630;Name=Msa0644630
chr4_3 mRNA 48706254 48714172 48706254 ID=Msa0644630-mRNA-1;Parent=Msa0644630;Name=Msa0644630-mRNA-1;_AED=0.22;_eAED=0.22;_QI=1136|1|1|1|0.78|0.8|15|251|201
chr4_3 exon 48706254 48706587 48706254 ID=Msa0644630-mRNA-1:exon:11606;Parent=Msa0644630-mRNA-1
chr4_3 exon 48706666 48706754 48706666 ID=Msa0644630-mRNA-1:exon:11607;Parent=Msa0644630-mRNA-1
chr4_3 exon 48707983 48708061 48707983 ID=Msa0644630-mRNA-1:exon:11608;Parent=Msa0644630-mRNA-1
chr4_3 exon 48708151 48708210 48708151 ID=Msa0644630-mRNA-1:exon:11609;Parent=Msa0644630-mRNA-1
chr4_3 exon 48708317 48708383 48708317 ID=Msa0644630-mRNA-1:exon:11610;Parent=Msa0644630-mRNA-1
chr4_3 exon 48708663 48708787 48708663 ID=Msa0644630-mRNA-1:exon:11611;Parent=Msa0644630-mRNA-1
chr4_3 exon 48708863 48708964 48708863 ID=Msa0644630-mRNA-1:exon:11612;Parent=Msa0644630-mRNA-1
chr4_3 exon 48709043 48709342 48709043 ID=Msa0644630-mRNA-1:exon:11613;Parent=Msa0644630-mRNA-1
chr4_3 exon 48709399 48709420 48709399 ID=Msa0644630-mRNA-1:exon:11614;Parent=Msa0644630-mRNA-1
chr4_3 exon 48709561 48709608 48709561 ID=Msa0644630-mRNA-1:exon:11615;Parent=Msa0644630-mRNA-1
chr4_3 exon 48709705 48709767 48709705 ID=Msa0644630-mRNA-1:exon:11616;Parent=Msa0644630-mRNA-1
chr4_3 exon 48709856 48709936 48709856 ID=Msa0644630-mRNA-1:exon:11617;Parent=Msa0644630-mRNA-1
chr4_3 exon 48710029 48710127 48710029 ID=Msa0644630-mRNA-1:exon:11618;Parent=Msa0644630-mRNA-1
chr4_3 exon 48713538 48713675 48713538 ID=Msa0644630-mRNA-1:exon:11619;Parent=Msa0644630-mRNA-1
chr4_3 exon 48713787 48714172 48713787 ID=Msa0644630-mRNA-1:exon:11620;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48706254 48706587 48706254 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48706666 48706754 48706666 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48707983 48708061 48707983 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48708151 48708210 48708151 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48708317 48708383 48708317 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48708663 48708787 48708663 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48708863 48708964 48708863 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 five_prime_UTR 48709043 48709322 48709043 ID=Msa0644630-mRNA-1:five_prime_utr;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48709323 48709342 48709323 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48709399 48709420 48709399 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48709561 48709608 48709561 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48709705 48709767 48709705 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48709856 48709936 48709856 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48710029 48710127 48710029 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48713538 48713675 48713538 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 CDS 48713787 48713921 48713787 ID=Msa0644630-mRNA-1:cds;Parent=Msa0644630-mRNA-1
chr4_3 three_prime_UTR 48713922 48714172 48713922 ID=Msa0644630-mRNA-1:three_prime_utr;Parent=Msa0644630-mRNA-1
Gene Sequence

>Msa0644630

ATGAAGATCAGGAATCCGAGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCAGGTCCCATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCTGACGCGGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTAGTAATGACATCGGTTGCTGTCCTAAAAGTGGACGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCTTATCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTCGGAGGGCTGCCAATTGTTGCTGTTGGGGCGTTGCTTCTTTACGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTGATGGTATCTGAAATCTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTCGCTGCCAATGCTGTTGTTACCTTTGCATTCTCACCATTGAAGGAGTATCTTGGAGCAGAGAACCTTTTTCTCCTTTTTGCGGCCATTGCATTAGTGTCACTTGTGTTCATTGTAACTTCTGTCCCAGAGACAAAAGGCTTGAGCTTAGAAGAAATTGAATCCAAAATCTTGAAGTGA
Protein sequence

>Msa0644630

MKIRNPRGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGAENLFLLFAAIALVSLVFIVTSVPETKGLSLEEIESKILK*