AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387970 MtrunA17_Chr4g0032021 99.485 194 1 0 8 201 363 556 1.62e-128 372
Msa0387970 MtrunA17_Chr4g0039651 72.021 193 54 0 8 200 309 501 1.70e-89 271
Msa0387970 MtrunA17_Chr4g0021771 35.385 195 117 3 8 196 308 499 3.10e-30 116
Msa0387970 MtrunA17_Chr3g0144361 33.673 196 123 1 8 196 293 488 5.20e-30 115
Msa0387970 MtrunA17_Chr7g0214451 34.518 197 118 3 8 196 283 476 1.63e-29 114
Msa0387970 MtrunA17_Chr2g0282031 33.854 192 124 1 8 196 306 497 2.50e-29 113
Msa0387970 MtrunA17_Chr7g0273261 34.694 196 119 4 8 199 47 237 8.38e-29 108
Msa0387970 MtrunA17_Chr4g0036021 34.184 196 122 1 8 196 289 484 1.01e-28 111
Msa0387970 MtrunA17_Chr7g0259471 34.343 198 119 3 8 199 281 473 1.72e-28 110
Msa0387970 MtrunA17_Chr7g0259221 32.828 198 122 3 8 199 283 475 7.33e-28 108
Msa0387970 MtrunA17_Chr1g0213631 33.846 195 123 1 8 196 235 429 7.60e-28 108
Msa0387970 MtrunA17_Chr5g0432581 33.168 202 126 3 8 201 284 484 1.46e-27 108
Msa0387970 MtrunA17_Chr7g0273281 34.872 195 116 3 8 196 303 492 1.60e-27 108
Msa0387970 MtrunA17_Chr4g0034681 32.843 204 124 2 8 201 293 493 2.58e-27 107
Msa0387970 MtrunA17_Chr1g0213611 32.338 201 121 2 8 196 328 525 3.63e-26 104
Msa0387970 MtrunA17_Chr8g0390521 33.673 196 124 1 8 197 274 469 8.92e-26 103
Msa0387970 MtrunA17_Chr6g0457781 35.079 191 118 3 9 196 352 539 8.02e-25 100
Msa0387970 MtrunA17_Chr4g0066581 31.633 196 124 3 8 197 293 484 4.53e-24 98.6
Msa0387970 MtrunA17_Chr8g0373531 32.995 197 123 2 8 196 284 479 1.32e-23 97.4
Msa0387970 MtrunA17_Chr3g0121674 30.882 204 131 2 2 195 79 282 1.57e-23 95.1
Msa0387970 MtrunA17_Chr6g0485661 31.771 192 122 3 8 191 312 502 1.89e-23 97.1
Msa0387970 MtrunA17_Chr7g0250881 34.555 191 119 2 9 196 312 499 3.76e-23 96.3
Msa0387970 MtrunA17_Chr8g0373181 33.668 199 118 4 8 196 288 482 1.82e-22 94.0
Msa0387970 MtrunA17_Chr2g0286721 28.788 198 131 3 8 199 290 483 5.42e-22 92.8
Msa0387970 MtrunA17_Chr1g0205691 33.488 215 123 6 4 201 278 489 7.13e-22 92.4
Msa0387970 MtrunA17_Chr8g0373191 32.367 207 120 4 8 201 260 459 1.13e-21 91.7
Msa0387970 MtrunA17_Chr4g0004821 29.688 192 126 3 13 200 287 473 1.42e-21 91.7
Msa0387970 MtrunA17_Chr1g0205671 32.000 200 125 3 11 201 292 489 1.91e-21 91.3
Msa0387970 MtrunA17_Chr5g0394341 33.498 203 122 7 9 201 290 489 1.32e-20 89.0
Msa0387970 MtrunA17_Chr5g0420841 32.487 197 120 5 11 196 291 485 6.90e-20 86.7
Msa0387970 MtrunA17_Chr6g0486021 32.461 191 122 3 13 200 301 487 1.06e-19 86.3
Msa0387970 MtrunA17_Chr1g0155221 30.500 200 124 5 8 196 290 485 1.07e-19 86.3
Msa0387970 MtrunA17_Chr4g0065311 33.679 193 116 5 12 195 289 478 1.17e-19 86.3
Msa0387970 MtrunA17_Chr1g0205681 33.000 200 123 3 11 201 293 490 1.34e-19 85.9
Msa0387970 MtrunA17_Chr3g0115711 35.897 195 113 5 11 195 290 482 2.54e-18 82.4
Msa0387970 MtrunA17_Chr4g0065351 35.233 193 113 5 12 195 132 321 3.19e-18 81.3
Msa0387970 MtrunA17_Chr4g0065324 34.021 194 114 4 12 195 297 486 3.34e-18 82.0
Msa0387970 MtrunA17_Chr8g0390261 33.679 193 116 4 12 195 296 485 8.32e-18 80.9
Msa0387970 MtrunA17_Chr8g0390141 32.828 198 119 5 8 195 292 485 1.10e-17 80.5
Msa0387970 MtrunA17_Chr3g0078991 30.256 195 126 5 11 197 294 486 2.02e-17 79.7
Msa0387970 MtrunA17_Chr2g0290181 42.609 115 62 1 91 201 444 558 2.08e-17 79.7
Msa0387970 MtrunA17_Chr3g0085971 29.442 197 126 4 11 196 291 485 2.75e-17 79.3
Msa0387970 MtrunA17_Chr6g0486681 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa0387970 MtrunA17_Chr6g0486671 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa0387970 MtrunA17_Chr5g0403831 29.648 199 131 3 8 197 295 493 5.60e-17 78.6
Msa0387970 MtrunA17_Chr3g0119401 29.442 197 127 3 9 199 342 532 1.19e-16 77.4
Msa0387970 MtrunA17_Chr3g0146061 30.500 200 127 3 8 195 524 723 1.30e-16 77.4
Msa0387970 MtrunA17_Chr3g0128171 31.633 196 121 6 11 195 245 438 1.52e-16 77.0
Msa0387970 MtrunA17_Chr3g0115751 32.828 198 115 6 11 195 296 488 2.91e-16 76.3
Msa0387970 MtrunA17_Chr3g0144261 32.338 201 122 5 8 195 514 713 3.94e-16 76.3
Msa0387970 MtrunA17_Chr4g0048411 31.818 198 120 6 11 196 292 486 9.55e-16 74.7
Msa0387970 MtrunA17_Chr8g0370151 31.500 200 125 3 8 195 145 344 1.20e-15 73.9
Msa0387970 MtrunA17_Chr3g0115741 33.333 198 114 6 11 195 294 486 1.43e-15 74.3
Msa0387970 MtrunA17_Chr3g0115721 34.848 198 111 6 11 195 291 483 1.88e-15 73.9
Msa0387970 MtrunA17_Chr7g0257631 32.984 191 118 4 13 195 330 518 2.44e-15 73.6
Msa0387970 MtrunA17_Chr5g0417611 28.283 198 129 5 11 197 293 488 2.85e-15 73.6
Msa0387970 MtrunA17_Chr8g0376631 38.000 100 62 0 98 197 451 550 3.29e-15 73.2
Msa0387970 MtrunA17_Chr5g0404181 36.937 111 66 2 86 196 22 128 3.46e-15 69.3
Msa0387970 MtrunA17_Chr3g0078791 31.156 199 98 7 11 195 237 410 5.44e-15 72.4
Msa0387970 MtrunA17_Chr3g0115781 29.293 198 124 5 11 196 293 486 5.87e-15 72.4
Msa0387970 MtrunA17_Chr3g0115731 31.980 197 118 4 11 195 270 462 8.44e-15 72.0
Msa0387970 MtrunA17_Chr5g0445601 30.890 191 122 4 13 195 296 484 2.33e-14 70.9
Msa0387970 MtrunA17_Chr3g0078971 28.500 200 121 5 11 196 293 484 5.51e-14 69.7
Msa0387970 MtrunA17_Chr3g0128081 30.583 206 121 8 11 201 292 490 6.87e-14 69.3
Msa0387970 MtrunA17_Chr2g0303731 35.789 95 61 0 103 197 457 551 9.79e-14 68.9
Msa0387970 MtrunA17_Chr4g0048051 34.653 202 118 6 11 201 292 490 1.15e-13 68.9
Msa0387970 MtrunA17_Chr5g0434251 35.789 95 61 0 102 196 42 136 1.26e-13 65.9
Msa0387970 MtrunA17_Chr5g0407441 30.000 200 128 3 8 195 506 705 1.76e-13 68.6
Msa0387970 MtrunA17_Chr8g0376611 36.170 94 60 0 103 196 387 480 3.78e-13 67.4
Msa0387970 MtrunA17_Chr5g0419321 28.643 199 128 3 8 193 532 729 4.23e-12 64.3
Msa0387970 MtrunA17_Chr1g0164851 29.442 197 125 5 11 196 291 484 5.16e-12 63.9
Msa0387970 MtrunA17_Chr1g0164871 28.934 197 126 5 11 196 291 484 8.98e-12 63.2
Msa0387970 MtrunA17_Chr2g0290161 40.000 115 65 1 91 201 351 465 1.09e-11 63.2
Msa0387970 MtrunA17_Chr5g0437021 28.708 209 120 8 11 201 291 488 6.01e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387970 AT5G59250.1 87.629 194 24 0 8 201 365 558 6.08e-114 336
Msa0387970 AT3G03090.1 70.466 193 57 0 8 200 311 503 7.20e-88 267
Msa0387970 AT5G17010.1 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0387970 AT5G17010.3 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0387970 AT5G17010.4 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa0387970 AT5G17010.2 51.333 150 46 1 51 200 318 440 1.91e-36 132
Msa0387970 AT5G27360.2 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa0387970 AT5G27360.5 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa0387970 AT5G27360.1 37.000 200 115 4 8 201 276 470 1.19e-32 122
Msa0387970 AT5G27360.3 37.000 200 115 4 8 201 324 518 1.54e-32 122
Msa0387970 AT5G27350.1 35.000 200 119 4 8 201 272 466 1.16e-30 117
Msa0387970 AT3G18830.1 34.010 197 123 1 8 197 300 496 3.18e-30 116
Msa0387970 AT3G05165.3 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0387970 AT3G05165.2 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0387970 AT3G05165.1 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa0387970 AT2G20780.2 33.854 192 124 1 8 196 248 439 1.70e-27 108
Msa0387970 AT2G20780.1 33.854 192 124 1 8 196 306 497 2.17e-27 108
Msa0387970 AT5G18840.1 31.658 199 126 3 9 201 286 480 2.60e-27 108
Msa0387970 AT2G16120.1 32.828 198 125 1 8 197 290 487 1.12e-26 106
Msa0387970 AT2G16130.1 32.828 198 125 1 8 197 290 487 1.51e-26 106
Msa0387970 AT3G05150.1 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa0387970 AT3G05150.3 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa0387970 AT3G05150.2 33.000 200 122 4 8 200 276 470 2.59e-26 105
Msa0387970 AT3G05160.3 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa0387970 AT3G05160.2 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa0387970 AT4G36670.1 33.838 198 122 2 8 197 281 477 4.78e-26 104
Msa0387970 AT3G05160.1 32.323 198 123 3 8 199 262 454 5.80e-26 103
Msa0387970 AT2G43330.1 34.010 197 123 3 8 197 281 477 8.74e-26 103
Msa0387970 AT1G08930.1 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa0387970 AT1G08930.2 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa0387970 AT2G48020.2 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa0387970 AT2G48020.1 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa0387970 AT1G54730.2 33.333 198 121 4 8 199 273 465 1.81e-24 100
Msa0387970 AT2G18480.1 32.487 197 125 2 8 197 286 481 1.89e-24 100
Msa0387970 AT1G79820.2 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa0387970 AT1G79820.1 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa0387970 AT1G08900.5 29.231 195 127 4 13 201 229 418 2.97e-22 93.6
Msa0387970 AT1G08900.3 29.231 195 127 4 13 201 263 452 4.47e-22 93.2
Msa0387970 AT1G08900.1 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa0387970 AT1G08900.2 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa0387970 AT1G08890.1 32.308 195 117 6 13 199 273 460 2.76e-21 90.9
Msa0387970 AT5G26340.1 32.020 203 125 5 9 201 291 490 4.31e-21 90.5
Msa0387970 AT1G08920.1 29.293 198 129 4 8 199 273 465 4.87e-21 90.5
Msa0387970 AT1G75220.1 32.000 200 122 4 8 197 289 484 3.58e-20 87.8
Msa0387970 AT3G05155.1 29.146 199 127 4 8 198 265 457 1.36e-19 86.3
Msa0387970 AT1G08920.2 28.293 205 129 5 8 199 273 472 4.39e-19 84.7
Msa0387970 AT5G16150.2 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0387970 AT5G16150.1 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0387970 AT5G16150.3 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa0387970 AT4G04750.3 30.769 195 124 3 9 197 324 513 6.79e-19 84.3
Msa0387970 AT3G51490.2 31.500 200 125 4 8 195 517 716 7.11e-19 84.3
Msa0387970 AT4G04750.1 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa0387970 AT4G04750.2 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa0387970 AT3G51490.3 31.500 200 125 4 8 195 467 666 7.84e-19 84.3
Msa0387970 AT4G04760.3 32.308 195 121 4 9 197 217 406 1.42e-18 83.2
Msa0387970 AT4G04760.1 32.308 195 121 4 9 197 276 465 1.67e-18 83.2
Msa0387970 AT1G19450.1 32.512 203 117 7 8 197 290 485 2.36e-18 82.8
Msa0387970 AT5G23270.1 33.005 203 119 7 11 201 294 491 3.18e-18 82.4
Msa0387970 AT1G79820.3 35.329 167 105 1 38 201 278 444 3.30e-18 82.0
Msa0387970 AT4G02050.2 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa0387970 AT4G02050.1 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa0387970 AT1G79820.5 35.329 167 105 1 38 201 216 382 3.72e-18 81.6
Msa0387970 AT3G05165.6 29.167 168 108 3 8 169 271 433 8.24e-18 81.3
Msa0387970 AT4G16480.2 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0387970 AT4G16480.3 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0387970 AT4G16480.1 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa0387970 AT1G54730.5 28.571 196 112 4 8 199 273 444 4.40e-17 79.0
Msa0387970 AT1G77210.3 34.314 204 108 6 8 195 143 336 6.75e-17 78.2
Msa0387970 AT3G05960.1 34.483 203 119 7 9 201 286 484 8.55e-17 78.2
Msa0387970 AT1G77210.2 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa0387970 AT1G77210.1 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa0387970 AT5G26250.1 33.663 202 122 6 9 201 287 485 1.10e-16 77.8
Msa0387970 AT3G20460.1 28.796 191 113 4 23 201 309 488 1.85e-16 77.4
Msa0387970 AT4G21480.1 32.487 197 118 6 12 196 291 484 2.84e-16 76.6
Msa0387970 AT3G05400.1 28.205 195 129 4 8 196 267 456 3.03e-16 76.6
Msa0387970 AT3G05400.2 28.205 195 129 4 8 196 247 436 3.19e-16 76.6
Msa0387970 AT1G67300.1 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa0387970 AT1G67300.3 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa0387970 AT1G05030.2 29.231 195 124 3 9 196 275 462 3.45e-16 76.6
Msa0387970 AT1G50310.2 33.163 196 117 6 11 195 151 343 3.55e-16 76.3
Msa0387970 AT3G05165.4 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa0387970 AT3G05165.5 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa0387970 AT1G05030.1 29.231 195 124 3 9 196 327 514 4.54e-16 76.3
Msa0387970 AT1G50310.1 33.163 196 117 6 11 195 294 486 5.07e-16 75.9
Msa0387970 AT1G20840.2 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa0387970 AT1G20840.1 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa0387970 AT1G54730.3 31.646 158 98 3 8 159 273 426 5.98e-16 75.9
Msa0387970 AT3G51490.1 30.102 196 125 4 8 195 517 708 7.52e-16 75.9
Msa0387970 AT4G04760.2 31.088 193 123 5 9 197 276 462 1.04e-15 75.1
Msa0387970 AT2G35740.1 42.857 105 57 1 92 196 455 556 1.13e-15 75.1
Msa0387970 AT1G67300.2 29.534 193 126 4 13 200 304 491 1.22e-15 75.1
Msa0387970 AT1G34580.2 29.231 195 124 5 12 195 246 437 1.30e-15 74.7
Msa0387970 AT1G34580.1 29.231 195 124 5 12 195 296 487 1.69e-15 74.7
Msa0387970 AT1G30220.1 41.237 97 53 1 104 196 457 553 2.10e-15 74.3
Msa0387970 AT3G19940.1 32.000 200 114 7 11 195 293 485 2.16e-15 74.3
Msa0387970 AT4G35300.9 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0387970 AT4G35300.2 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0387970 AT4G35300.3 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa0387970 AT4G35300.4 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.8 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.6 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.11 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.1 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.10 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.7 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa0387970 AT4G35300.5 30.808 198 125 3 8 193 326 523 4.17e-15 73.6
Msa0387970 AT1G07340.1 32.057 209 117 7 9 201 288 487 7.30e-15 72.8
Msa0387970 AT1G11260.1 30.457 197 122 6 11 195 292 485 2.23e-14 71.2
Msa0387970 AT5G27360.4 35.385 130 74 3 8 131 276 401 3.21e-13 67.8
Msa0387970 AT1G79820.4 31.884 138 87 2 9 143 301 434 5.28e-13 67.4
Msa0387970 AT3G19930.1 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa0387970 AT3G19930.2 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa0387970 AT1G08920.3 25.949 158 107 3 8 159 273 426 9.21e-12 63.5

Find 157 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGTCACTTCAAGATTT+TGG 0.110124 3_1:+92067810 None:intergenic
TGGTGACAAATGATTGTTTA+TGG 0.216441 3_1:+92075036 None:intergenic
TCCCTCTATGGGGCTCTTCT+TGG 0.227190 3_1:-92073390 Msa0387970:five_prime_UTR
GCATTGGGTGGCTTGCTATT+TGG 0.229582 3_1:-92073720 Msa0387970:five_prime_UTR
TTAGCAGGAAGGCTGCTTTA+TGG 0.247331 3_1:-92072967 Msa0387970:five_prime_UTR
CTTCATCGTCTTGGGGATTC+TGG 0.254886 3_1:-92072773 Msa0387970:intron
GGCTGCCAATTGTTGCTGTT+GGG 0.261289 3_1:-92071641 Msa0387970:CDS
TTGAATTCTTTACTCTTTGA+TGG 0.263452 3_1:+92075107 None:intergenic
TTGCTATTTGGTTATGATAT+TGG 0.265731 3_1:-92073708 Msa0387970:five_prime_UTR
TGCTCCACTTGCTGTGTTAA+TGG 0.274481 3_1:-92072605 Msa0387970:five_prime_UTR
AGCAACCACCGAGGAGATTC+GGG 0.294580 3_1:+92072562 None:intergenic
TTTGAATTGCAGATATCATT+TGG 0.297753 3_1:-92068189 Msa0387970:intron
GCTAAAGTTTCAGTTGTTAT+TGG 0.319773 3_1:-92071981 Msa0387970:CDS
AAAGAACTCTTCATCGTCTT+GGG 0.324920 3_1:-92072781 Msa0387970:five_prime_UTR
GTCCTAAAAGTGGACGATTT+GGG 0.331656 3_1:-92071839 Msa0387970:CDS
TTTGATCAGTTTGTAGAATC+AGG 0.335063 3_1:+92075236 None:intergenic
TGTCCTAAAAGTGGACGATT+TGG 0.336456 3_1:-92071840 Msa0387970:CDS
TGTTGTTGATGATGCCATTT+GGG 0.337414 3_1:+92075168 None:intergenic
ATCTGTTGGTGAATCTTTAG+AGG 0.350880 3_1:+92075283 None:intergenic
GGGCTGCCAATTGTTGCTGT+TGG 0.358412 3_1:-92071642 Msa0387970:CDS
TAGGTCAGTGGTTCCCTCTA+TGG 0.360177 3_1:-92073402 Msa0387970:five_prime_UTR
AAGCAACCACCGAGGAGATT+CGG 0.364539 3_1:+92072561 None:intergenic
CTAATGCAATGGCCGCAAAA+AGG 0.369183 3_1:+92067899 None:intergenic
TTATGCAGGTCCCATTCTTC+AGG 0.371687 3_1:-92072129 Msa0387970:intron
AGTGCGAAGTGGGAAGATTT+CGG 0.375828 3_1:+92068143 None:intergenic
CTTTGCATTCTCACCATTGA+AGG 0.377650 3_1:-92068061 Msa0387970:intron
CTGCTTTATGGACTTGGTAT+AGG 0.378257 3_1:-92072955 Msa0387970:five_prime_UTR
TCTGCTTATTATAAATTTCT+CGG 0.392006 3_1:-92071666 Msa0387970:CDS
CAAGTTTCTGCAATGTATAA+AGG 0.395816 3_1:+92072838 None:intergenic
AGGTCAGTGGTTCCCTCTAT+GGG 0.396820 3_1:-92073401 Msa0387970:five_prime_UTR
CTCAAAGCCGTTCAAGGAAA+AGG 0.398628 3_1:-92072538 Msa0387970:five_prime_UTR
TTTGCAGTTGCTGATTTCAT+TGG 0.402124 3_1:-92073354 Msa0387970:intron
TTGAATTGCAGATATCATTT+GGG 0.403806 3_1:-92068188 Msa0387970:intron
GGGAGAAGACCTCTGCTGAT+TGG 0.408128 3_1:-92071818 Msa0387970:CDS
CACTACCAAGTACATACAAC+AGG 0.412932 3_1:+92073025 None:intergenic
ACAATTAAGTACCTGAAGAA+TGG 0.413009 3_1:+92072118 None:intergenic
ATTCCACTGCAGGAGTATCT+TGG 0.414752 3_1:-92067940 Msa0387970:intron
AAAAGAACTCTTCATCGTCT+TGG 0.415813 3_1:-92072782 Msa0387970:five_prime_UTR
TTGTTTCCCTGGGCAAACTA+AGG 0.416488 3_1:-92072486 Msa0387970:five_prime_UTR
GCTCCACTTGCTGTGTTAAT+GGG 0.419247 3_1:-92072604 Msa0387970:five_prime_UTR
GGAAGGCTGCTTTATGGACT+TGG 0.423684 3_1:-92072961 Msa0387970:five_prime_UTR
TTCCATTCAGCTTGGTCTTG+TGG 0.424172 3_1:-92073527 Msa0387970:intron
AAGCTGAATGGAAGAAAGAT+TGG 0.431812 3_1:+92073537 None:intergenic
GAACTTGGTGTTCTCTTAGC+AGG 0.432287 3_1:-92072982 Msa0387970:five_prime_UTR
GATACCATCAGCCAACTTAT+CGG 0.433272 3_1:+92068165 None:intergenic
CAAGTTACTCAAATCACATC+AGG 0.433338 3_1:-92067670 Msa0387970:three_prime_UTR
AAACTAAGGGGCCGGCCACT+TGG 0.434562 3_1:-92072472 Msa0387970:five_prime_UTR
GCCGGCCCCTTAGTTTGCCC+AGG 0.434700 3_1:+92072479 None:intergenic
CTTATTCTTGCTGCCCCAAA+TGG 0.435118 3_1:-92075182 Msa0387970:five_prime_UTR
ACATAATTCCAATAGATAAC+AGG 0.438031 3_1:-92072170 Msa0387970:intron
TATGATACATTCACATCAAA+AGG 0.439235 3_1:+92067779 None:intergenic
GTGTTGTTGATGATGCCATT+TGG 0.449019 3_1:+92075167 None:intergenic
TTATGGACTTGGTATAGGTC+TGG 0.452748 3_1:-92072950 Msa0387970:intron
GGAAAAGGCAATTGTTTCCC+TGG 0.453254 3_1:-92072497 Msa0387970:five_prime_UTR
AACAGCATTGGCAGCGAAGT+TGG 0.454377 3_1:+92068089 None:intergenic
TTGCTTCTCAAAGCCGTTCA+AGG 0.455548 3_1:-92072544 Msa0387970:five_prime_UTR
GGGGCTAGTATTATTTCAAC+AGG 0.459642 3_1:-92072317 Msa0387970:intron
AGTTGTTATTGGCTTATTCA+AGG 0.462352 3_1:-92071970 Msa0387970:intron
AACGCCCCAACAGCAACAAT+TGG 0.464360 3_1:+92071636 None:intergenic
GAAGAGTGAGCGGTAAGAAG+TGG 0.468368 3_1:+92074998 None:intergenic
CTGAGCTTAGCGGTGTCGCT+TGG 0.469539 3_1:-92073561 Msa0387970:five_prime_UTR
CAATTAAGTACCTGAAGAAT+GGG 0.470930 3_1:+92072119 None:intergenic
GCTAAGAGAACACCAAGTTC+TGG 0.473041 3_1:+92072985 None:intergenic
AATAGCAAGCCACCCAATGC+AGG 0.473802 3_1:+92073723 None:intergenic
AATCTTTCTTCCATTCAGCT+TGG 0.477827 3_1:-92073535 Msa0387970:five_prime_UTR
TATCATTTGGGCCGATAAGT+TGG 0.479888 3_1:-92068176 Msa0387970:CDS
CAAGCGCAGGAGTATTCTGC+TGG 0.483479 3_1:-92074874 Msa0387970:five_prime_UTR
CCCTGGGCAAACTAAGGGGC+CGG 0.484017 3_1:-92072480 Msa0387970:five_prime_UTR
GAAGTCTGCCTATGAAGATC+AGG 0.486030 3_1:-92072404 Msa0387970:exon
CCCACTTCGCACTAGAGGAC+GGG 0.489293 3_1:-92068133 Msa0387970:CDS
TGTTTCCCTGGGCAAACTAA+GGG 0.494124 3_1:-92072485 Msa0387970:five_prime_UTR
TATGATATTGGTGCCACATC+CGG 0.495216 3_1:-92073696 Msa0387970:five_prime_UTR
AAGACCAAGAAAATTTCTCT+TGG 0.500479 3_1:+92074824 None:intergenic
CCAAGAAAATTTCTCTTGGT+CGG 0.502343 3_1:+92074828 None:intergenic
CATGGCTGTTTGTTATCTGT+TGG 0.506259 3_1:+92075269 None:intergenic
ATGTTATATATCTAGAGTGC+TGG 0.506363 3_1:-92072026 Msa0387970:intron
ATTCTTTGTCACCAAGTGGC+CGG 0.507367 3_1:+92072461 None:intergenic
TCTTTACGTTGGTTGCTACC+AGG 0.507374 3_1:-92071610 Msa0387970:intron
CTTGCTGTGTTAATGGGACT+CGG 0.509742 3_1:-92072598 Msa0387970:five_prime_UTR
TGAAATTGTAGCACCGGATG+TGG 0.509979 3_1:+92073683 None:intergenic
GAATCAGGAGTGAGGAATCA+TGG 0.510204 3_1:+92075251 None:intergenic
GCTGCCAATTGTTGCTGTTG+GGG 0.510591 3_1:-92071640 Msa0387970:CDS
CTCGGATTCCTGATCTTCAT+AGG 0.511530 3_1:+92072396 None:intergenic
GCTTTCAGATTAGTACAGTA+GGG 0.511807 3_1:-92072654 Msa0387970:five_prime_UTR
CCTAGTGTTCTGTATTATGC+AGG 0.524477 3_1:-92072143 Msa0387970:CDS
ATTGTATATATCACATGTGT+GGG 0.524514 3_1:-92067747 Msa0387970:three_prime_UTR
CGGTGCTACAATTTCACTGC+AGG 0.525053 3_1:-92073676 Msa0387970:intron
ACTGCCACAGCACCAGAACT+TGG 0.525417 3_1:-92072997 Msa0387970:five_prime_UTR
TTCTGGACAGGTTCAAGCGC+AGG 0.528839 3_1:-92074887 Msa0387970:intron
CTGATGTGATTTGAGTAACT+TGG 0.529187 3_1:+92067671 None:intergenic
CTGCTGATTGGAGGTGTCAG+TGG 0.531307 3_1:-92071806 Msa0387970:CDS
ATCTTCCCACTTCGCACTAG+AGG 0.532990 3_1:-92068138 Msa0387970:CDS
AGAAGACCTCTGCTGATTGG+AGG 0.533132 3_1:-92071815 Msa0387970:CDS
ACTTCTGTCCCAGAGACAAA+AGG 0.535446 3_1:-92067856 Msa0387970:CDS
CGACTCTCCCCGAATCTCCT+CGG 0.539213 3_1:-92072570 Msa0387970:five_prime_UTR
GAAATTTATAATAAGCAGAA+AGG 0.540216 3_1:+92071670 None:intergenic
TACCACAAGACCAAGCTGAA+TGG 0.542358 3_1:+92073525 None:intergenic
CTGCAGTGAAATTGTAGCAC+CGG 0.542977 3_1:+92073677 None:intergenic
CCTGCATAATACAGAACACT+AGG 0.543440 3_1:+92072143 None:intergenic
ATCGGTTGCTGTCCTAAAAG+TGG 0.545652 3_1:-92071849 Msa0387970:CDS
GCCAAGAAGAGCCCCATAGA+GGG 0.547197 3_1:+92073389 None:intergenic
TGCAAAGGTAACAACAGCAT+TGG 0.547945 3_1:+92068077 None:intergenic
CTTATTATAAATTTCTCGGA+GGG 0.549041 3_1:-92071662 Msa0387970:CDS
TCACAGTCACCTGAGCTTAG+CGG 0.551554 3_1:-92073571 Msa0387970:intron
TCCTAAAAGTGGACGATTTG+GGG 0.552375 3_1:-92071838 Msa0387970:CDS
AAGAACTCTTCATCGTCTTG+GGG 0.554273 3_1:-92072780 Msa0387970:five_prime_UTR
AATGAATTGCAGGCTATGCA+TGG 0.556209 3_1:-92072865 Msa0387970:intron
GCAGCCCTGTTGTATGTACT+TGG 0.557623 3_1:-92073030 Msa0387970:five_prime_UTR
AGAAAGGAGAACTAAAGATA+AGG 0.558234 3_1:+92071686 None:intergenic
AGCCAAGAAGAGCCCCATAG+AGG 0.560695 3_1:+92073388 None:intergenic
CCCGTCCTCTAGTGCGAAGT+GGG 0.561592 3_1:+92068133 None:intergenic
CAAGCGACACCGCTAAGCTC+AGG 0.561862 3_1:+92073562 None:intergenic
CCACTTCGCACTAGAGGACG+GGG 0.565068 3_1:-92068132 Msa0387970:CDS
AGTCCCATTAACACAGCAAG+TGG 0.566767 3_1:+92072601 None:intergenic
CCGGCCCCTTAGTTTGCCCA+GGG 0.566966 3_1:+92072480 None:intergenic
AGCTTTCAGATTAGTACAGT+AGG 0.568312 3_1:-92072655 Msa0387970:five_prime_UTR
TCCCACTTCGCACTAGAGGA+CGG 0.571506 3_1:-92068134 Msa0387970:CDS
AACACCAAGTTCTGGTGCTG+TGG 0.571690 3_1:+92072993 None:intergenic
CATTGTATATATCACATGTG+TGG 0.573595 3_1:-92067748 Msa0387970:three_prime_UTR
GAGTACTTACTTGGAATCTA+CGG 0.575656 3_1:+92074969 None:intergenic
TCAGATTCTTTGTCACCAAG+TGG 0.579152 3_1:+92072457 None:intergenic
GAAAAGGCAATTGTTTCCCT+GGG 0.582828 3_1:-92072496 Msa0387970:five_prime_UTR
GGGGCGTTGCTTCTTTACGT+TGG 0.589105 3_1:-92071621 Msa0387970:CDS
TGGGCCGATAAGTTGGCTGA+TGG 0.598976 3_1:-92068169 Msa0387970:CDS
CACAAGTGACACTAATGCAA+TGG 0.600703 3_1:+92067888 None:intergenic
AGAGTCCCACGGATTTGTGA+TGG 0.602252 3_1:+92072814 None:intergenic
CCCCGTCCTCTAGTGCGAAG+TGG 0.606766 3_1:+92068132 None:intergenic
TTGGTGTTCTCTTAGCAGGA+AGG 0.607143 3_1:-92072978 Msa0387970:five_prime_UTR
GGGAGGAAGCGACAACTCAT+CGG 0.612912 3_1:-92073054 Msa0387970:five_prime_UTR
CTTTCAGATTAGTACAGTAG+GGG 0.614719 3_1:-92072653 Msa0387970:five_prime_UTR
GCTTCCTGCATCACACACAC+TGG 0.625199 3_1:-92075314 None:intergenic
AGGCAGACTTCAACGAGACA+AGG 0.627144 3_1:+92072416 None:intergenic
ATGGAAGAAGAAATAATGCG+TGG 0.628626 3_1:+92075055 None:intergenic
ATAGCAAGCCACCCAATGCA+GGG 0.629494 3_1:+92073724 None:intergenic
GGTCAGTGGTTCCCTCTATG+GGG 0.636174 3_1:-92073400 Msa0387970:five_prime_UTR
CTTCAATGGTGAGAATGCAA+AGG 0.636883 3_1:+92068062 None:intergenic
GTTTCCCTGGGCAAACTAAG+GGG 0.640750 3_1:-92072484 Msa0387970:five_prime_UTR
TTTCAGATTAGTACAGTAGG+GGG 0.644587 3_1:-92072652 Msa0387970:five_prime_UTR
CTTGTCCATCACAAATCCGT+GGG 0.645682 3_1:-92072819 Msa0387970:five_prime_UTR
AAGCGCAGGAGTATTCTGCT+GGG 0.648733 3_1:-92074873 Msa0387970:five_prime_UTR
ACTTGTCCATCACAAATCCG+TGG 0.650114 3_1:-92072820 Msa0387970:five_prime_UTR
GCTTATTATAAATTTCTCGG+AGG 0.651466 3_1:-92071663 Msa0387970:CDS
TTAATGATACTAGAGTCCCA+CGG 0.652488 3_1:+92072803 None:intergenic
CTCTCCCCGAATCTCCTCGG+TGG 0.653850 3_1:-92072567 Msa0387970:five_prime_UTR
CTATGAAGATCAGGAATCCG+AGG 0.658223 3_1:-92072395 Msa0387970:intron
AGTGGATAAGTGACACGTGT+TGG 0.663963 3_1:+92075016 None:intergenic
TAATGTCAAACATAGGTCAG+TGG 0.676967 3_1:-92073414 Msa0387970:intron
CCTGTAGTTAGTAATGACAT+CGG 0.683946 3_1:-92071867 Msa0387970:intron
CTGACACCTCCAATCAGCAG+AGG 0.685495 3_1:+92071809 None:intergenic
AAGTTACTCAAATCACATCA+GGG 0.687402 3_1:-92067669 Msa0387970:three_prime_UTR
AGTTTGTAGAATCAGGAGTG+AGG 0.687548 3_1:+92075243 None:intergenic
GTTGTTGATGATGCCATTTG+GGG 0.691111 3_1:+92075169 None:intergenic
CACTTCGCACTAGAGGACGG+GGG 0.710664 3_1:-92068131 Msa0387970:CDS
GCAACCACCGAGGAGATTCG+GGG 0.734795 3_1:+92072563 None:intergenic
ACTACCAAGTACATACAACA+GGG 0.734915 3_1:+92073026 None:intergenic
ACGGTGATGAGAAGAGTGAG+CGG 0.739322 3_1:+92074988 None:intergenic
GCTTTGAGAAGCAACCACCG+AGG 0.801181 3_1:+92072553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACATATATATAATCTA+CGG + chr3_1:92070828-92070847 None:intergenic 10.0%
!! TAAATTTCAATTATTATGCT+GGG - chr3_1:92068596-92068615 Msa0387970:intron 15.0%
!! ATCTATAATTCTATATGTAA+TGG + chr3_1:92069956-92069975 None:intergenic 15.0%
!! TAGAAATGAAAAATCTAAAT+AGG + chr3_1:92070926-92070945 None:intergenic 15.0%
!!! CAAAAATGTCATAATTTTAT+TGG + chr3_1:92071660-92071679 None:intergenic 15.0%
!! ACAAAATTGACAAAAAAAAA+TGG - chr3_1:92071790-92071809 Msa0387970:intron 15.0%
!!! TAATAAGTTGTTTTGATAAA+AGG - chr3_1:92072008-92072027 Msa0387970:CDS 15.0%
!!! AATAAGTTGTTTTGATAAAA+GGG - chr3_1:92072009-92072028 Msa0387970:CDS 15.0%
!!! AATTTTGTTTATTCATCTTC+TGG - chr3_1:92067962-92067981 Msa0387970:intron 20.0%
!! AATAAATGTATCAAAGTATG+TGG - chr3_1:92068116-92068135 Msa0387970:CDS 20.0%
!! CATGAAGTTAAAACTTATAT+AGG - chr3_1:92068187-92068206 Msa0387970:intron 20.0%
!! ATGTGAAAAACTGTAATAAA+TGG - chr3_1:92068381-92068400 Msa0387970:intron 20.0%
!! TGTGAAAAACTGTAATAAAT+GGG - chr3_1:92068382-92068401 Msa0387970:intron 20.0%
!! CTAAATTTCAATTATTATGC+TGG - chr3_1:92068595-92068614 Msa0387970:intron 20.0%
!! AAATTTCAATTATTATGCTG+GGG - chr3_1:92068597-92068616 Msa0387970:intron 20.0%
!! TTCATATAAGTTATAAGCAA+TGG + chr3_1:92068630-92068649 None:intergenic 20.0%
!! AAACTGTCCAAATTATTATA+AGG - chr3_1:92068843-92068862 Msa0387970:intron 20.0%
!!! ATTAATTTGGATAAAACACT+AGG - chr3_1:92069791-92069810 Msa0387970:intron 20.0%
!!! TTAATTTGGATAAAACACTA+GGG - chr3_1:92069792-92069811 Msa0387970:intron 20.0%
!! TCAATATAACATTAGTAAAG+TGG + chr3_1:92070634-92070653 None:intergenic 20.0%
!! CTTTACTAATGTTATATTGA+AGG - chr3_1:92070634-92070653 Msa0387970:intron 20.0%
!! ATGTTATATTGAAGGAAATA+TGG - chr3_1:92070642-92070661 Msa0387970:intron 20.0%
!! GAAATTTATAATAAGCAGAA+AGG + chr3_1:92071199-92071218 None:intergenic 20.0%
!! TCTGCTTATTATAAATTTCT+CGG - chr3_1:92071200-92071219 Msa0387970:intron 20.0%
!!! ATTATTTTTGCCATAGAATT+CGG - chr3_1:92071360-92071379 Msa0387970:intron 20.0%
!!! AGAATTTTTCATTTATTGCT+AGG + chr3_1:92071451-92071470 None:intergenic 20.0%
!!! GGTGAAATACTTTTTTTTTT+GGG + chr3_1:92071517-92071536 None:intergenic 20.0%
!!! TGGTGAAATACTTTTTTTTT+TGG + chr3_1:92071518-92071537 None:intergenic 20.0%
!! ATCGATATTAAATTGTGAAT+TGG - chr3_1:92071578-92071597 Msa0387970:intron 20.0%
!!! TTTATTGGTAATGTATCTTA+CGG + chr3_1:92071645-92071664 None:intergenic 20.0%
!! AATCAAATGAAAAAGAAAAG+TGG - chr3_1:92071759-92071778 Msa0387970:intron 20.0%
!! AATTGACAAAAAAAAATGGT+TGG - chr3_1:92071794-92071813 Msa0387970:intron 20.0%
!! AACCCTTAATATTTAGAAAA+GGG - chr3_1:92071933-92071952 Msa0387970:intron 20.0%
!!! ATCCCTTTTCTAAATATTAA+GGG + chr3_1:92071938-92071957 None:intergenic 20.0%
!!! AATCCCTTTTCTAAATATTA+AGG + chr3_1:92071939-92071958 None:intergenic 20.0%
!!! GATCATATTTTCAAATTACA+TGG + chr3_1:92073283-92073302 None:intergenic 20.0%
!! TGATATTTGACATAAATCTA+CGG + chr3_1:92074657-92074676 None:intergenic 20.0%
!! CTTCAATAAGAAAATAAAAC+TGG + chr3_1:92074848-92074867 None:intergenic 20.0%
! TTGAATTCTTTACTCTTTGA+TGG + chr3_1:92067762-92067781 None:intergenic 25.0%
! ATTAAAGTGACAGAAACATA+CGG + chr3_1:92068079-92068098 None:intergenic 25.0%
!! GTCACTTTAATTTCTTTGTA+AGG - chr3_1:92068088-92068107 Msa0387970:CDS 25.0%
! AACAAACTTTAGTGTTTGTT+TGG - chr3_1:92068216-92068235 Msa0387970:intron 25.0%
! AACAAACTTTAGTGTTTGTT+TGG - chr3_1:92068216-92068235 Msa0387970:intron 25.0%
! AAAAAAGTGACAGAAACATA+CGG + chr3_1:92068298-92068317 None:intergenic 25.0%
!!! TTTTTTTTATTTCTCTCCTG+AGG - chr3_1:92068321-92068340 Msa0387970:intron 25.0%
! ATTTCAATTAAGACCTTGAT+TGG - chr3_1:92068524-92068543 Msa0387970:intron 25.0%
! AATTAGAATGTGTTTGTGTT+TGG + chr3_1:92068925-92068944 None:intergenic 25.0%
!! ACACAAACACATTCTAATTT+TGG - chr3_1:92068926-92068945 Msa0387970:intron 25.0%
!!! TTGCTATTTGGTTATGATAT+TGG - chr3_1:92069158-92069177 Msa0387970:intron 25.0%
!! TCTTATTTACATTATCCAGA+AGG - chr3_1:92069545-92069564 Msa0387970:intron 25.0%
! TGTAAAAATCTTTACACTGA+CGG + chr3_1:92069624-92069643 None:intergenic 25.0%
!!! TTTTCAAGATTTGAAGGAAA+AGG - chr3_1:92070354-92070373 Msa0387970:intron 25.0%
! ACATAATTCCAATAGATAAC+AGG - chr3_1:92070696-92070715 Msa0387970:intron 25.0%
!!! CACTTTTCTTTTAATTGTGT+AGG - chr3_1:92071157-92071176 Msa0387970:intron 25.0%
! CTTATTATAAATTTCTCGGA+GGG - chr3_1:92071204-92071223 Msa0387970:intron 25.0%
! ATAATCAAATACTGTTGAAG+AGG + chr3_1:92071345-92071364 None:intergenic 25.0%
! AAATGAAAAAGAAAAGTGGT+TGG - chr3_1:92071763-92071782 Msa0387970:intron 25.0%
!!! GATTAAGAAGTGGATTTTAT+CGG + chr3_1:92071910-92071929 None:intergenic 25.0%
! ATAAAATCCACTTCTTAATC+AGG - chr3_1:92071910-92071929 Msa0387970:intron 25.0%
! GAACCCTTAATATTTAGAAA+AGG - chr3_1:92071932-92071951 Msa0387970:intron 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG - chr3_1:92072154-92072173 Msa0387970:CDS 25.0%
!!! TGGTAACCATTTAATTTTTG+TGG + chr3_1:92073389-92073408 None:intergenic 25.0%
! GAAAAGGAAAATTAGTCATT+GGG + chr3_1:92073690-92073709 None:intergenic 25.0%
! AGAAAAGGAAAATTAGTCAT+TGG + chr3_1:92073691-92073710 None:intergenic 25.0%
! TAGAAATGTTTGAGTCAATA+AGG - chr3_1:92073833-92073852 Msa0387970:intron 25.0%
! AGAAATGTTTGAGTCAATAA+GGG - chr3_1:92073834-92073853 Msa0387970:intron 25.0%
! TTTGACATTCAATACAAAGA+GGG + chr3_1:92073919-92073938 None:intergenic 25.0%
! ATTTGACATTCAATACAAAG+AGG + chr3_1:92073920-92073939 None:intergenic 25.0%
! TAGCTATCATATATCATATG+CGG + chr3_1:92074079-92074098 None:intergenic 25.0%
! TTAGATTTATGTGAGTTGTA+AGG + chr3_1:92074378-92074397 None:intergenic 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG - chr3_1:92072154-92072173 Msa0387970:CDS 25.0%
! TATACTATCACATAGTGAAT+CGG - chr3_1:92074481-92074500 Msa0387970:intron 25.0%
! AGGAATTCATCATAATGAAT+CGG - chr3_1:92074504-92074523 Msa0387970:intron 25.0%
! TTTGAATTGCAGATATCATT+TGG - chr3_1:92074677-92074696 Msa0387970:intron 25.0%
! TTGAATTGCAGATATCATTT+GGG - chr3_1:92074678-92074697 Msa0387970:intron 25.0%
! AGAAAATAAAACTGGAAGTA+AGG + chr3_1:92074840-92074859 None:intergenic 25.0%
! TATGATACATTCACATCAAA+AGG + chr3_1:92075090-92075109 None:intergenic 25.0%
! ATTGTATATATCACATGTGT+GGG - chr3_1:92075119-92075138 Msa0387970:five_prime_UTR 25.0%
TTTGATCAGTTTGTAGAATC+AGG + chr3_1:92067633-92067652 None:intergenic 30.0%
TGGTGACAAATGATTGTTTA+TGG + chr3_1:92067833-92067852 None:intergenic 30.0%
AAGACCAAGAAAATTTCTCT+TGG + chr3_1:92068045-92068064 None:intergenic 30.0%
!! TGTTTGGACAAACTTTTTCT+TGG - chr3_1:92068257-92068276 Msa0387970:intron 30.0%
! TAGATAAGTGTTTTGTGTGT+AGG - chr3_1:92068352-92068371 Msa0387970:intron 30.0%
GAAAAACTGTAATAAATGGG+AGG - chr3_1:92068385-92068404 Msa0387970:intron 30.0%
! GTATGTGATGTTTTACTACT+TGG - chr3_1:92068425-92068444 Msa0387970:intron 30.0%
! ACATTAGTAGTCACTTTAAG+TGG + chr3_1:92068464-92068483 None:intergenic 30.0%
ACTACTAATGTGAAAGACAA+TGG - chr3_1:92068473-92068492 Msa0387970:intron 30.0%
TGAAAGACAATGGAAAACTT+AGG - chr3_1:92068483-92068502 Msa0387970:intron 30.0%
TTGTTTATCCAAACAATGAG+AGG - chr3_1:92068743-92068762 Msa0387970:intron 30.0%
! GTTACTGTAATTGGTTTATC+AGG - chr3_1:92068765-92068784 Msa0387970:intron 30.0%
AGGTGCTCCTTATAATAATT+TGG + chr3_1:92068853-92068872 None:intergenic 30.0%
AAACAGCATGCTTAATTAAC+TGG + chr3_1:92069103-92069122 None:intergenic 30.0%
!! AGCATGCTGTTTCAAAATTT+AGG - chr3_1:92069111-92069130 Msa0387970:intron 30.0%
! TATGATTTTTGTGTCCTAGT+TGG - chr3_1:92069362-92069381 Msa0387970:intron 30.0%
TAACTGCTAATGTCAAACAT+AGG - chr3_1:92069445-92069464 Msa0387970:intron 30.0%
AATTCATTTCGCTTGTAAGA+TGG + chr3_1:92069989-92070008 None:intergenic 30.0%
CAAGTTTCTGCAATGTATAA+AGG + chr3_1:92070031-92070050 None:intergenic 30.0%
AACTTAAGAGTTTACTGAGT+TGG - chr3_1:92070151-92070170 Msa0387970:intron 30.0%
ACTTAAGAGTTTACTGAGTT+GGG - chr3_1:92070152-92070171 Msa0387970:intron 30.0%
! AAAAGAACCTTTTCCTTGAA+CGG + chr3_1:92070338-92070357 None:intergenic 30.0%
!! AGGTTCTTTTCAAGATTTGA+AGG - chr3_1:92070348-92070367 Msa0387970:intron 30.0%
ATTACGAATGCTTTCAGATT+GGG + chr3_1:92070523-92070542 None:intergenic 30.0%
AATTACGAATGCTTTCAGAT+TGG + chr3_1:92070524-92070543 None:intergenic 30.0%
!! AATCTGAAAGCATTCGTAAT+TGG - chr3_1:92070523-92070542 Msa0387970:intron 30.0%
AATAACTCATTGCACTGAAA+TGG + chr3_1:92070580-92070599 None:intergenic 30.0%
CAATTAAGTACCTGAAGAAT+GGG + chr3_1:92070750-92070769 None:intergenic 30.0%
ACAATTAAGTACCTGAAGAA+TGG + chr3_1:92070751-92070770 None:intergenic 30.0%
! ATGTTATATATCTAGAGTGC+TGG - chr3_1:92070840-92070859 Msa0387970:intron 30.0%
GCTAAAGTTTCAGTTGTTAT+TGG - chr3_1:92070885-92070904 Msa0387970:intron 30.0%
!! AGTTGTTATTGGCTTATTCA+AGG - chr3_1:92070896-92070915 Msa0387970:intron 30.0%
AGAAAGGAGAACTAAAGATA+AGG + chr3_1:92071183-92071202 None:intergenic 30.0%
GCTTATTATAAATTTCTCGG+AGG - chr3_1:92071203-92071222 Msa0387970:intron 30.0%
!!! TTTTTTTTGGGTACAAGAGA+GGG + chr3_1:92071505-92071524 None:intergenic 30.0%
!!! TTTTTTTTTGGGTACAAGAG+AGG + chr3_1:92071506-92071525 None:intergenic 30.0%
GTAACATAATAGAGAGAATG+AGG - chr3_1:92071979-92071998 Msa0387970:CDS 30.0%
ATAATAATACTCCCAAGTAG+TGG - chr3_1:92072326-92072345 Msa0387970:intron 30.0%
!!! ATCTTGGCAGAATTTTAGTT+GGG - chr3_1:92072624-92072643 Msa0387970:five_prime_UTR 30.0%
! TTGTGAATTGAAGCATCTTT+GGG - chr3_1:92072661-92072680 Msa0387970:five_prime_UTR 30.0%
TCAAGGTCTTAGACAAAATT+GGG + chr3_1:92072711-92072730 None:intergenic 30.0%
TTCAAGGTCTTAGACAAAAT+TGG + chr3_1:92072712-92072731 None:intergenic 30.0%
!! ATTTTGTCTAAGACCTTGAA+AGG - chr3_1:92072712-92072731 Msa0387970:intron 30.0%
GCTTAAATTCCATCTATTAC+AGG + chr3_1:92072887-92072906 None:intergenic 30.0%
ATAAACTTACCTTATCTTCC+GGG + chr3_1:92072970-92072989 None:intergenic 30.0%
CATAAACTTACCTTATCTTC+CGG + chr3_1:92072971-92072990 None:intergenic 30.0%
GGAAGATAAGGTAAGTTTAT+GGG - chr3_1:92072970-92072989 Msa0387970:five_prime_UTR 30.0%
GAAGATAAGGTAAGTTTATG+GGG - chr3_1:92072971-92072990 Msa0387970:five_prime_UTR 30.0%
! ACAGTTTTTCACTTTACAAG+GGG + chr3_1:92073205-92073224 None:intergenic 30.0%
! GACAGTTTTTCACTTTACAA+GGG + chr3_1:92073206-92073225 None:intergenic 30.0%
! AGAATTGGCTTAGAAATGTA+GGG - chr3_1:92073227-92073246 Msa0387970:intron 30.0%
ATATGCTCATTTCATTCCTT+TGG + chr3_1:92073347-92073366 None:intergenic 30.0%
! TAATTTTTGTGGTTGTCGAT+AGG + chr3_1:92073378-92073397 None:intergenic 30.0%
CGACAACCACAAAAATTAAA+TGG - chr3_1:92073380-92073399 Msa0387970:five_prime_UTR 30.0%
TATTTGGACTGATATCAGTA+CGG + chr3_1:92073440-92073459 None:intergenic 30.0%
ATATCAGTCCAAATAAGTGA+AGG - chr3_1:92073445-92073464 Msa0387970:intron 30.0%
TCCAAATAAGTGAAGGAATT+GGG - chr3_1:92073452-92073471 Msa0387970:intron 30.0%
TAAACCTTTCCAAAAGAAGA+GGG - chr3_1:92073567-92073586 Msa0387970:five_prime_UTR 30.0%
TCAAACTGCATATTCTACAT+TGG + chr3_1:92073654-92073673 None:intergenic 30.0%
! TGAATTTAGAGTGTGACTAT+GGG - chr3_1:92073734-92073753 Msa0387970:five_prime_UTR 30.0%
AAATTCAAAGCCCATCAATT+TGG - chr3_1:92073936-92073955 Msa0387970:intron 30.0%
! ATTTGCTAATGTAGGCAATT+GGG - chr3_1:92074147-92074166 Msa0387970:intron 30.0%
GTAACATAATAGAGAGAATG+AGG - chr3_1:92071979-92071998 Msa0387970:CDS 30.0%
ATTGATCCTTTGCCTTATAA+AGG - chr3_1:92074286-92074305 Msa0387970:intron 30.0%
TTGATCCTTTGCCTTATAAA+GGG - chr3_1:92074287-92074306 Msa0387970:intron 30.0%
TTGTAATCAGTCCCTTTATA+AGG + chr3_1:92074301-92074320 None:intergenic 30.0%
TATAAAGGGACTGATTACAA+CGG - chr3_1:92074301-92074320 Msa0387970:intron 30.0%
AATTCATCATAATGAATCGG+AGG - chr3_1:92074507-92074526 Msa0387970:intron 30.0%
AAGGAATCAAAAACCTTCAA+TGG + chr3_1:92074821-92074840 None:intergenic 30.0%
TAAATTTGTCTGAATGCTGT+AGG - chr3_1:92074884-92074903 Msa0387970:intron 30.0%
CATTGTATATATCACATGTG+TGG - chr3_1:92075118-92075137 Msa0387970:five_prime_UTR 30.0%
AAGTTACTCAAATCACATCA+GGG - chr3_1:92075197-92075216 Msa0387970:five_prime_UTR 30.0%
! ATCTGTTGGTGAATCTTTAG+AGG + chr3_1:92067586-92067605 None:intergenic 35.0%
!! TGTTGTTGATGATGCCATTT+GGG + chr3_1:92067701-92067720 None:intergenic 35.0%
ATGGAAGAAGAAATAATGCG+TGG + chr3_1:92067814-92067833 None:intergenic 35.0%
GAGTACTTACTTGGAATCTA+CGG + chr3_1:92067900-92067919 None:intergenic 35.0%
TGTTTATTCATCTTCTGGAC+AGG - chr3_1:92067967-92067986 Msa0387970:intron 35.0%
CCAAGAAAATTTCTCTTGGT+CGG + chr3_1:92068041-92068060 None:intergenic 35.0%
CTTATCTAATTCAATGCCTC+AGG + chr3_1:92068340-92068359 None:intergenic 35.0%
ACATGTTATGGAACCAATCA+AGG + chr3_1:92068540-92068559 None:intergenic 35.0%
TTTCAGTTCTGCACATGTTA+TGG + chr3_1:92068552-92068571 None:intergenic 35.0%
GTATGCAAGAGTAAGATTCT+TGG - chr3_1:92068572-92068591 Msa0387970:intron 35.0%
TACAGTAACCTCTCATTGTT+TGG + chr3_1:92068754-92068773 None:intergenic 35.0%
CAATGAGAGGTTACTGTAAT+TGG - chr3_1:92068756-92068775 Msa0387970:intron 35.0%
ACCACTCCAACAAAGAAAAT+GGG + chr3_1:92068878-92068897 None:intergenic 35.0%
TACCACTCCAACAAAGAAAA+TGG + chr3_1:92068879-92068898 None:intergenic 35.0%
ATGTGTTTGTGTTTGGTCAA+TGG + chr3_1:92068918-92068937 None:intergenic 35.0%
TTAACTGGTAAACATAGACC+AGG + chr3_1:92069088-92069107 None:intergenic 35.0%
AAGCTGAATGGAAGAAAGAT+TGG + chr3_1:92069332-92069351 None:intergenic 35.0%
AATCTTTCTTCCATTCAGCT+TGG - chr3_1:92069331-92069350 Msa0387970:intron 35.0%
! AAGCAAGATGTTTTCCAACT+AGG + chr3_1:92069379-92069398 None:intergenic 35.0%
TAATGTCAAACATAGGTCAG+TGG - chr3_1:92069452-92069471 Msa0387970:intron 35.0%
!! TTTGCAGTTGCTGATTTCAT+TGG - chr3_1:92069512-92069531 Msa0387970:intron 35.0%
! AGCTTAATTTTGTACGCTGT+CGG + chr3_1:92069758-92069777 None:intergenic 35.0%
ATTTGGATAAAACACTAGGG+AGG - chr3_1:92069795-92069814 Msa0387970:intron 35.0%
ACTACCAAGTACATACAACA+GGG + chr3_1:92069843-92069862 None:intergenic 35.0%
TTACAAGCGAAATGAATTGC+AGG - chr3_1:92069991-92070010 Msa0387970:intron 35.0%
TTAATGATACTAGAGTCCCA+CGG + chr3_1:92070066-92070085 None:intergenic 35.0%
AAAAGAACTCTTCATCGTCT+TGG - chr3_1:92070084-92070103 Msa0387970:intron 35.0%
AAAGAACTCTTCATCGTCTT+GGG - chr3_1:92070085-92070104 Msa0387970:intron 35.0%
CTTAAGAGTTTACTGAGTTG+GGG - chr3_1:92070153-92070172 Msa0387970:intron 35.0%
!! ATGCAGTTGGGTTATTTTGT+GGG - chr3_1:92070187-92070206 Msa0387970:intron 35.0%
AGCTTTCAGATTAGTACAGT+AGG - chr3_1:92070211-92070230 Msa0387970:intron 35.0%
GCTTTCAGATTAGTACAGTA+GGG - chr3_1:92070212-92070231 Msa0387970:intron 35.0%
CTTTCAGATTAGTACAGTAG+GGG - chr3_1:92070213-92070232 Msa0387970:intron 35.0%
TTTCAGATTAGTACAGTAGG+GGG - chr3_1:92070214-92070233 Msa0387970:intron 35.0%
!! AGTTTCTTAGAGGTGTTTCA+GGG - chr3_1:92070496-92070515 Msa0387970:intron 35.0%
!! TGAAAGCATTCGTAATTGGT+GGG - chr3_1:92070527-92070546 Msa0387970:intron 35.0%
! TAGGTTGACCTGTTATCTAT+TGG + chr3_1:92070707-92070726 None:intergenic 35.0%
CCTGTAGTTAGTAATGACAT+CGG - chr3_1:92070999-92071018 Msa0387970:intron 35.0%
TCTGACAAGAAATAGTAGCA+AGG + chr3_1:92071303-92071322 None:intergenic 35.0%
ATTCTACTGTCCGAATTCTA+TGG + chr3_1:92071373-92071392 None:intergenic 35.0%
AGAATTCGGACAGTAGAATA+TGG - chr3_1:92071374-92071393 Msa0387970:intron 35.0%
GAATTCGGACAGTAGAATAT+GGG - chr3_1:92071375-92071394 Msa0387970:intron 35.0%
!!! TTTTTTTGGGTACAAGAGAG+GGG + chr3_1:92071504-92071523 None:intergenic 35.0%
TGCATCAACACTAAGGAAAA+TGG + chr3_1:92071538-92071557 None:intergenic 35.0%
TTTAAGCTGCATCAACACTA+AGG + chr3_1:92071545-92071564 None:intergenic 35.0%
! GTTGGTCATGCTAAGTTTTT+AGG - chr3_1:92071812-92071831 Msa0387970:CDS 35.0%
GTGATTCATAAGAACGAATC+AGG - chr3_1:92071837-92071856 Msa0387970:CDS 35.0%
ATTGATCCTTTGCCTTGTAA+AGG - chr3_1:92072045-92072064 Msa0387970:intron 35.0%
TTGATCCTTTGCCTTGTAAA+GGG - chr3_1:92072046-92072065 Msa0387970:intron 35.0%
TTGTAATCAGTCCCTTTACA+AGG + chr3_1:92072060-92072079 None:intergenic 35.0%
TGTAAAGGGACTGATTACAA+CGG - chr3_1:92072060-92072079 Msa0387970:intron 35.0%
CTAAATTAGCCCACCTAAAT+TGG + chr3_1:92072414-92072433 None:intergenic 35.0%
!! GATCTTGGCAGAATTTTAGT+TGG - chr3_1:92072623-92072642 Msa0387970:five_prime_UTR 35.0%
! GTTGTGAATTGAAGCATCTT+TGG - chr3_1:92072660-92072679 Msa0387970:five_prime_UTR 35.0%
CAAGGTCTTAGACAAAATTG+GGG + chr3_1:92072710-92072729 None:intergenic 35.0%
TAAGTATTACGGTCCTTTCA+AGG + chr3_1:92072728-92072747 None:intergenic 35.0%
TTGAAAGGACCGTAATACTT+AGG - chr3_1:92072727-92072746 Msa0387970:intron 35.0%
AAACTCCTGCCTAAGTATTA+CGG + chr3_1:92072739-92072758 None:intergenic 35.0%
AGTGATGAGAATTTCTCTGT+TGG + chr3_1:92072826-92072845 None:intergenic 35.0%
TCAGAACAGAATGAAACAAC+AGG + chr3_1:92072863-92072882 None:intergenic 35.0%
CGGAAGATAAGGTAAGTTTA+TGG - chr3_1:92072969-92072988 Msa0387970:five_prime_UTR 35.0%
TGTCCATATACTACCTCAAA+CGG - chr3_1:92073000-92073019 Msa0387970:five_prime_UTR 35.0%
! AACCATTTGGACCAATTTTG+AGG - chr3_1:92073078-92073097 Msa0387970:intron 35.0%
! GGACAGTTTTTCACTTTACA+AGG + chr3_1:92073207-92073226 None:intergenic 35.0%
AGTGAAAAACTGTCCAGAAT+TGG - chr3_1:92073212-92073231 Msa0387970:intron 35.0%
CTACATTTCTAAGCCAATTC+TGG + chr3_1:92073228-92073247 None:intergenic 35.0%
! CAGAATTGGCTTAGAAATGT+AGG - chr3_1:92073226-92073245 Msa0387970:intron 35.0%
ATTAAATGGTTACCAGACGA+AGG - chr3_1:92073394-92073413 Msa0387970:five_prime_UTR 35.0%
TTAAATGGTTACCAGACGAA+GGG - chr3_1:92073395-92073414 Msa0387970:five_prime_UTR 35.0%
ATCAGTACGGACTTTATTGA+AGG + chr3_1:92073427-92073446 None:intergenic 35.0%
GTCCAAATAAGTGAAGGAAT+TGG - chr3_1:92073451-92073470 Msa0387970:intron 35.0%
TCCCAATTCCTTCACTTATT+TGG + chr3_1:92073456-92073475 None:intergenic 35.0%
CTAAACCTTTCCAAAAGAAG+AGG - chr3_1:92073566-92073585 Msa0387970:five_prime_UTR 35.0%
AAACCTTTCCAAAAGAAGAG+GGG - chr3_1:92073568-92073587 Msa0387970:five_prime_UTR 35.0%
GTCACACTCTAAATTCACTT+GGG + chr3_1:92073731-92073750 None:intergenic 35.0%
AGTCACACTCTAAATTCACT+TGG + chr3_1:92073732-92073751 None:intergenic 35.0%
! GTGAATTTAGAGTGTGACTA+TGG - chr3_1:92073733-92073752 Msa0387970:five_prime_UTR 35.0%
TTCAATGTCCGAAATGAGTT+CGG - chr3_1:92073762-92073781 Msa0387970:intron 35.0%
!! AAAGAGCATTAAGCACATTC+TGG + chr3_1:92074001-92074020 None:intergenic 35.0%
ATCATATGCGGTGCAAAAAT+GGG + chr3_1:92074067-92074086 None:intergenic 35.0%
TATCATATGCGGTGCAAAAA+TGG + chr3_1:92074068-92074087 None:intergenic 35.0%
!! ACCCAAAGATTTGCTAATGT+AGG - chr3_1:92074139-92074158 Msa0387970:intron 35.0%
GCCTACATTAGCAAATCTTT+GGG + chr3_1:92074143-92074162 None:intergenic 35.0%
TGCCTACATTAGCAAATCTT+TGG + chr3_1:92074144-92074163 None:intergenic 35.0%
!! GATTTGCTAATGTAGGCAAT+TGG - chr3_1:92074146-92074165 Msa0387970:intron 35.0%
ATCTTCTGAACTCAACGAAT+AGG + chr3_1:92071956-92071975 None:intergenic 35.0%
TCCATAACAGATACACACTA+GGG - chr3_1:92074547-92074566 Msa0387970:intron 35.0%
! TTGCAAGACATTGATAACCA+CGG - chr3_1:92074619-92074638 Msa0387970:intron 35.0%
! GAACCTTTTTCTCCTTTTTG+CGG - chr3_1:92074955-92074974 Msa0387970:intron 35.0%
CTGATGTGATTTGAGTAACT+TGG + chr3_1:92075198-92075217 None:intergenic 35.0%
CAAGTTACTCAAATCACATC+AGG - chr3_1:92075196-92075215 Msa0387970:five_prime_UTR 35.0%
!! CATGGCTGTTTGTTATCTGT+TGG + chr3_1:92067600-92067619 None:intergenic 40.0%
AGTTTGTAGAATCAGGAGTG+AGG + chr3_1:92067626-92067645 None:intergenic 40.0%
!! GTTGTTGATGATGCCATTTG+GGG + chr3_1:92067700-92067719 None:intergenic 40.0%
!! GTGTTGTTGATGATGCCATT+TGG + chr3_1:92067702-92067721 None:intergenic 40.0%
CCAGTTTCTGAGTACTTACT+TGG + chr3_1:92067909-92067928 None:intergenic 40.0%
CCAAGTAAGTACTCAGAAAC+TGG - chr3_1:92067906-92067925 Msa0387970:CDS 40.0%
! CCGACCAAGAGAAATTTTCT+TGG - chr3_1:92068038-92068057 Msa0387970:intron 40.0%
!! CCTTGAGTTGAGAATGTACT+GGG - chr3_1:92068795-92068814 Msa0387970:intron 40.0%
!! CTTGAGTTGAGAATGTACTG+GGG - chr3_1:92068796-92068815 Msa0387970:intron 40.0%
! ACCTTGCCCATTTTCTTTGT+TGG - chr3_1:92068869-92068888 Msa0387970:intron 40.0%
TCCAACAAAGAAAATGGGCA+AGG + chr3_1:92068873-92068892 None:intergenic 40.0%
!! AATACTTTGCTTCTAGAGCG+AGG - chr3_1:92068953-92068972 Msa0387970:intron 40.0%
!! ATACTTTGCTTCTAGAGCGA+GGG - chr3_1:92068954-92068973 Msa0387970:intron 40.0%
!! CTTTGAAATGTATGAGCTCC+TGG - chr3_1:92069067-92069086 Msa0387970:intron 40.0%
!! TAGGTTTGTTTTCCCTGCAT+TGG - chr3_1:92069130-92069149 Msa0387970:intron 40.0%
!! AGGTTTGTTTTCCCTGCATT+GGG - chr3_1:92069131-92069150 Msa0387970:intron 40.0%
!! TATGATATTGGTGCCACATC+CGG - chr3_1:92069170-92069189 Msa0387970:intron 40.0%
CACTACCAAGTACATACAAC+AGG + chr3_1:92069844-92069863 None:intergenic 40.0%
! CTGCTTTATGGACTTGGTAT+AGG - chr3_1:92069911-92069930 Msa0387970:intron 40.0%
! TTATGGACTTGGTATAGGTC+TGG - chr3_1:92069916-92069935 Msa0387970:intron 40.0%
AATGAATTGCAGGCTATGCA+TGG - chr3_1:92070001-92070020 Msa0387970:intron 40.0%
AAGAACTCTTCATCGTCTTG+GGG - chr3_1:92070086-92070105 Msa0387970:intron 40.0%
GACTGAACTATCATGCAGTT+GGG - chr3_1:92070175-92070194 Msa0387970:intron 40.0%
!! CATGCAGTTGGGTTATTTTG+TGG - chr3_1:92070186-92070205 Msa0387970:intron 40.0%
GAAAAGGCAATTGTTTCCCT+GGG - chr3_1:92070370-92070389 Msa0387970:intron 40.0%
TCAGATTCTTTGTCACCAAG+TGG + chr3_1:92070412-92070431 None:intergenic 40.0%
!! GAGTTTCTTAGAGGTGTTTC+AGG - chr3_1:92070495-92070514 Msa0387970:intron 40.0%
!! CTGAAAGCATTCGTAATTGG+TGG - chr3_1:92070526-92070545 Msa0387970:intron 40.0%
!! GAAAGCATTCGTAATTGGTG+GGG - chr3_1:92070528-92070547 Msa0387970:intron 40.0%
! AAAGCATTCGTAATTGGTGG+GGG - chr3_1:92070529-92070548 Msa0387970:intron 40.0%
! GGGGCTAGTATTATTTCAAC+AGG - chr3_1:92070549-92070568 Msa0387970:intron 40.0%
CCTGCATAATACAGAACACT+AGG + chr3_1:92070726-92070745 None:intergenic 40.0%
CCTAGTGTTCTGTATTATGC+AGG - chr3_1:92070723-92070742 Msa0387970:intron 40.0%
CCGATGTCATTACTAACTAC+AGG + chr3_1:92071002-92071021 None:intergenic 40.0%
TGTCCTAAAAGTGGACGATT+TGG - chr3_1:92071026-92071045 Msa0387970:intron 40.0%
GTCCTAAAAGTGGACGATTT+GGG - chr3_1:92071027-92071046 Msa0387970:intron 40.0%
TCCTAAAAGTGGACGATTTG+GGG - chr3_1:92071028-92071047 Msa0387970:intron 40.0%
ATGACCAGAAAACCATTACC+TGG + chr3_1:92071277-92071296 None:intergenic 40.0%
!! GGTAATGGTTTTCTGGTCAT+TGG - chr3_1:92071277-92071296 Msa0387970:intron 40.0%
GAGTAGAGAGGTCTTTCAAT+CGG + chr3_1:92071413-92071432 None:intergenic 40.0%
ACCTCTCTACTCCTCAAAAA+GGG - chr3_1:92071421-92071440 Msa0387970:intron 40.0%
AAGGGTTCCTGATTAAGAAG+TGG + chr3_1:92071920-92071939 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG + chr3_1:92072092-92072111 None:intergenic 40.0%
!! TTTCCTACTTTTCACCCTTG+AGG + chr3_1:92072291-92072310 None:intergenic 40.0%
GAAAAGTAGGAAAACGTTGC+AGG - chr3_1:92072298-92072317 Msa0387970:intron 40.0%
ATACTCCCAAGTAGTGGTAT+AGG - chr3_1:92072332-92072351 Msa0387970:intron 40.0%
! ATTCTCTCTGGTGCCAATTT+AGG - chr3_1:92072398-92072417 Msa0387970:exon 40.0%
GAAAGATACTCCACCTGAAA+TGG + chr3_1:92072473-92072492 None:intergenic 40.0%
AATTGCTGCTACCAAAGTTC+TGG + chr3_1:92072503-92072522 None:intergenic 40.0%
! GTGCATTTTAGACAGGAAGA+TGG + chr3_1:92072539-92072558 None:intergenic 40.0%
! CTTCCTGTCTAAAATGCACT+CGG - chr3_1:92072540-92072559 Msa0387970:five_prime_UTR 40.0%
! TTCCTGTCTAAAATGCACTC+GGG - chr3_1:92072541-92072560 Msa0387970:five_prime_UTR 40.0%
! TTATGGACTGTTGCTGTGTT+GGG - chr3_1:92072601-92072620 Msa0387970:five_prime_UTR 40.0%
! TGTTCTGAGCCTGTAATAGA+TGG - chr3_1:92072875-92072894 Msa0387970:intron 40.0%
GGGTGAATCAACGAATATGA+GGG + chr3_1:92072950-92072969 None:intergenic 40.0%
!! CTCATATTCGTTGATTCACC+CGG - chr3_1:92072949-92072968 Msa0387970:intron 40.0%
TAAGGTAAGTTTATGGGGAG+AGG - chr3_1:92072976-92072995 Msa0387970:five_prime_UTR 40.0%
! ACTCCGTTTGAGGTAGTATA+TGG + chr3_1:92073006-92073025 None:intergenic 40.0%
ATATACTACCTCAAACGGAG+TGG - chr3_1:92073005-92073024 Msa0387970:five_prime_UTR 40.0%
AATTCAATCCACTCCGTTTG+AGG + chr3_1:92073016-92073035 None:intergenic 40.0%
! AATGGTTATCACTGGCTGAA+TGG + chr3_1:92073065-92073084 None:intergenic 40.0%
TTCAGCCAGTGATAACCATT+TGG - chr3_1:92073065-92073084 Msa0387970:intron 40.0%
TTGGTCCAAATGGTTATCAC+TGG + chr3_1:92073073-92073092 None:intergenic 40.0%
AGCCTCAAAATTGGTCCAAA+TGG + chr3_1:92073083-92073102 None:intergenic 40.0%
CTTATCTTCGATGCTGTGTT+CGG + chr3_1:92073109-92073128 None:intergenic 40.0%
! GTTTTTCACTTTACAAGGGG+TGG + chr3_1:92073202-92073221 None:intergenic 40.0%
TAAATGGTTACCAGACGAAG+GGG - chr3_1:92073396-92073415 Msa0387970:five_prime_UTR 40.0%
ATAAGTGAAGGAATTGGGAG+TGG - chr3_1:92073457-92073476 Msa0387970:intron 40.0%
! GAATTAAGCCCCTCTTCTTT+TGG + chr3_1:92073579-92073598 None:intergenic 40.0%
CAGTAATATCTCGACCAGAA+TGG - chr3_1:92073605-92073624 Msa0387970:intron 40.0%
TCTAAATTCACTTGGGTACG+AGG + chr3_1:92073724-92073743 None:intergenic 40.0%
GTCCATAACCGAACTCATTT+CGG + chr3_1:92073773-92073792 None:intergenic 40.0%
GAAATGAGTTCGGTTATGGA+CGG - chr3_1:92073772-92073791 Msa0387970:intron 40.0%
!! GCTCTTTTGATCAGCTTTGA+TGG - chr3_1:92074014-92074033 Msa0387970:intron 40.0%
TCATATGCGGTGCAAAAATG+GGG + chr3_1:92074066-92074085 None:intergenic 40.0%
GTGTTTGTCTTGCATCAAGA+CGG - chr3_1:92074169-92074188 Msa0387970:intron 40.0%
TCAGTCCCTTTATAAGGCAA+AGG + chr3_1:92074295-92074314 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG + chr3_1:92072092-92072111 None:intergenic 40.0%
TGTTGAGCTGTCAAATGAAG+AGG + chr3_1:92074342-92074361 None:intergenic 40.0%
ACTATCACATAGTGAATCGG+AGG - chr3_1:92074484-92074503 Msa0387970:intron 40.0%
ATCATAATGAATCGGAGGTC+AGG - chr3_1:92074512-92074531 Msa0387970:intron 40.0%
GTCCATAACAGATACACACT+AGG - chr3_1:92074546-92074565 Msa0387970:intron 40.0%
TCCCTAGTGTGTATCTGTTA+TGG + chr3_1:92074551-92074570 None:intergenic 40.0%
TACGGTAATACTTTAAGCCG+TGG + chr3_1:92074639-92074658 None:intergenic 40.0%
TATCATTTGGGCCGATAAGT+TGG - chr3_1:92074690-92074709 Msa0387970:intron 40.0%
GATACCATCAGCCAACTTAT+CGG + chr3_1:92074704-92074723 None:intergenic 40.0%
TGCAAAGGTAACAACAGCAT+TGG + chr3_1:92074792-92074811 None:intergenic 40.0%
CTTCAATGGTGAGAATGCAA+AGG + chr3_1:92074807-92074826 None:intergenic 40.0%
CTTTGCATTCTCACCATTGA+AGG - chr3_1:92074805-92074824 Msa0387970:intron 40.0%
CACAAGTGACACTAATGCAA+TGG + chr3_1:92074981-92075000 None:intergenic 40.0%
!! CTGCTGTCACTTCAAGATTT+TGG + chr3_1:92075059-92075078 None:intergenic 40.0%
GAATCAGGAGTGAGGAATCA+TGG + chr3_1:92067618-92067637 None:intergenic 45.0%
CTTATTCTTGCTGCCCCAAA+TGG - chr3_1:92067684-92067703 Msa0387970:three_prime_UTR 45.0%
AGTGGATAAGTGACACGTGT+TGG + chr3_1:92067853-92067872 None:intergenic 45.0%
!! GCCTTGAGTTGAGAATGTAC+TGG - chr3_1:92068794-92068813 Msa0387970:intron 45.0%
CCCAGTACATTCTCAACTCA+AGG + chr3_1:92068798-92068817 None:intergenic 45.0%
! GCCCATTTTCTTTGTTGGAG+TGG - chr3_1:92068874-92068893 Msa0387970:intron 45.0%
!! TTTGTTTTCCCTGCATTGGG+TGG - chr3_1:92069134-92069153 Msa0387970:intron 45.0%
! TGAAATTGTAGCACCGGATG+TGG + chr3_1:92069186-92069205 None:intergenic 45.0%
CTGCAGTGAAATTGTAGCAC+CGG + chr3_1:92069192-92069211 None:intergenic 45.0%
!! TTCCATTCAGCTTGGTCTTG+TGG - chr3_1:92069339-92069358 Msa0387970:intron 45.0%
TACCACAAGACCAAGCTGAA+TGG + chr3_1:92069344-92069363 None:intergenic 45.0%
GTAGTTCAGTTTCTGCCTTC+TGG + chr3_1:92069563-92069582 None:intergenic 45.0%
GCTAAGAGAACACCAAGTTC+TGG + chr3_1:92069884-92069903 None:intergenic 45.0%
!! GAACTTGGTGTTCTCTTAGC+AGG - chr3_1:92069884-92069903 Msa0387970:intron 45.0%
! TTGGTGTTCTCTTAGCAGGA+AGG - chr3_1:92069888-92069907 Msa0387970:intron 45.0%
! TTAGCAGGAAGGCTGCTTTA+TGG - chr3_1:92069899-92069918 Msa0387970:intron 45.0%
ACTTGTCCATCACAAATCCG+TGG - chr3_1:92070046-92070065 Msa0387970:intron 45.0%
CTTGTCCATCACAAATCCGT+GGG - chr3_1:92070047-92070066 Msa0387970:intron 45.0%
GGACTGAACTATCATGCAGT+TGG - chr3_1:92070174-92070193 Msa0387970:intron 45.0%
AGATTAGTACAGTAGGGGGA+TGG - chr3_1:92070218-92070237 Msa0387970:intron 45.0%
!! TGCTCCACTTGCTGTGTTAA+TGG - chr3_1:92070261-92070280 Msa0387970:intron 45.0%
!! GCTCCACTTGCTGTGTTAAT+GGG - chr3_1:92070262-92070281 Msa0387970:intron 45.0%
AGTCCCATTAACACAGCAAG+TGG + chr3_1:92070268-92070287 None:intergenic 45.0%
! CTTGCTGTGTTAATGGGACT+CGG - chr3_1:92070268-92070287 Msa0387970:intron 45.0%
TTGCTTCTCAAAGCCGTTCA+AGG - chr3_1:92070322-92070341 Msa0387970:intron 45.0%
CTCAAAGCCGTTCAAGGAAA+AGG - chr3_1:92070328-92070347 Msa0387970:intron 45.0%
GGAAAAGGCAATTGTTTCCC+TGG - chr3_1:92070369-92070388 Msa0387970:intron 45.0%
TTGTTTCCCTGGGCAAACTA+AGG - chr3_1:92070380-92070399 Msa0387970:intron 45.0%
TGTTTCCCTGGGCAAACTAA+GGG - chr3_1:92070381-92070400 Msa0387970:intron 45.0%
ATTCTTTGTCACCAAGTGGC+CGG + chr3_1:92070408-92070427 None:intergenic 45.0%
GAAGTCTGCCTATGAAGATC+AGG - chr3_1:92070462-92070481 Msa0387970:intron 45.0%
CTCGGATTCCTGATCTTCAT+AGG + chr3_1:92070473-92070492 None:intergenic 45.0%
CTATGAAGATCAGGAATCCG+AGG - chr3_1:92070471-92070490 Msa0387970:intron 45.0%
AAGCATTCGTAATTGGTGGG+GGG - chr3_1:92070530-92070549 Msa0387970:intron 45.0%
TTATGCAGGTCCCATTCTTC+AGG - chr3_1:92070737-92070756 Msa0387970:intron 45.0%
ATCGGTTGCTGTCCTAAAAG+TGG - chr3_1:92071017-92071036 Msa0387970:intron 45.0%
!! TCCCCAAATCGTCCACTTTT+AGG + chr3_1:92071032-92071051 None:intergenic 45.0%
! TCTTTACGTTGGTTGCTACC+AGG - chr3_1:92071256-92071275 Msa0387970:intron 45.0%
!! GCTACCAGGTAATGGTTTTC+TGG - chr3_1:92071270-92071289 Msa0387970:intron 45.0%
GACCTCTCTACTCCTCAAAA+AGG - chr3_1:92071420-92071439 Msa0387970:intron 45.0%
!! TCCCTTTTTGAGGAGTAGAG+AGG + chr3_1:92071425-92071444 None:intergenic 45.0%
TCAGTCCCTTTACAAGGCAA+AGG + chr3_1:92072054-92072073 None:intergenic 45.0%
AAGGGACTGATTACAACGGT+TGG - chr3_1:92072064-92072083 Msa0387970:intron 45.0%
TGTCGAGCTGTCAAATGAAG+AGG + chr3_1:92072101-92072120 None:intergenic 45.0%
!! AAGGGTGCTCTTTAAGGAGA+GGG + chr3_1:92072266-92072285 None:intergenic 45.0%
! CTTTTCACCCTTGAGGTCAA+GGG + chr3_1:92072284-92072303 None:intergenic 45.0%
! ACTTTTCACCCTTGAGGTCA+AGG + chr3_1:92072285-92072304 None:intergenic 45.0%
TGACCTCAAGGGTGAAAAGT+AGG - chr3_1:92072285-92072304 Msa0387970:intron 45.0%
CCAAGCCTATACCACTACTT+GGG + chr3_1:92072340-92072359 None:intergenic 45.0%
CCAAGTAGTGGTATAGGCTT+GGG - chr3_1:92072338-92072357 Msa0387970:intron 45.0%
! TCTCTGGTGCCAATTTAGGT+GGG - chr3_1:92072402-92072421 Msa0387970:exon 45.0%
AACTCCCAAGTAGCCATTTC+AGG - chr3_1:92072457-92072476 Msa0387970:five_prime_UTR 45.0%
TCCACCTGAAATGGCTACTT+GGG + chr3_1:92072464-92072483 None:intergenic 45.0%
TTTCCACTGGACCAGAACTT+TGG - chr3_1:92072489-92072508 Msa0387970:five_prime_UTR 45.0%
AGCAACAGTCCATAACATCC+CGG + chr3_1:92072596-92072615 None:intergenic 45.0%
! GTTATGGACTGTTGCTGTGT+TGG - chr3_1:92072600-92072619 Msa0387970:five_prime_UTR 45.0%
CATCTTTGGGTAGCTCCAAT+TGG - chr3_1:92072674-92072693 Msa0387970:five_prime_UTR 45.0%
AAGGACCGTAATACTTAGGC+AGG - chr3_1:92072731-92072750 Msa0387970:intron 45.0%
TCCTCAAGTTACACCCTTAC+AGG + chr3_1:92072792-92072811 None:intergenic 45.0%
CGGGTGAATCAACGAATATG+AGG + chr3_1:92072951-92072970 None:intergenic 45.0%
! GTTGATTCACCCGGAAGATA+AGG - chr3_1:92072958-92072977 Msa0387970:five_prime_UTR 45.0%
GTTCGGAGAAGCCTCAAAAT+TGG + chr3_1:92073092-92073111 None:intergenic 45.0%
CTTATCACCCTCAAACCGAT+GGG + chr3_1:92073161-92073180 None:intergenic 45.0%
GGCTTAGAAATGTAGGGTCA+CGG - chr3_1:92073233-92073252 Msa0387970:intron 45.0%
CGGTCACTGGTGATTGAATT+AGG - chr3_1:92073253-92073272 Msa0387970:intron 45.0%
! GGATGTGGCACAAGTTTTCT+TGG + chr3_1:92073305-92073324 None:intergenic 45.0%
CCACATCCAATGCCGAATAA+GGG - chr3_1:92073317-92073336 Msa0387970:intron 45.0%
! TCCTTTGGCTCACCCTTATT+CGG + chr3_1:92073332-92073351 None:intergenic 45.0%
GGAGTGGTTGAAGTAAACCA+GGG - chr3_1:92073473-92073492 Msa0387970:intron 45.0%
GAGTGGTTGAAGTAAACCAG+GGG - chr3_1:92073474-92073493 Msa0387970:intron 45.0%
!! AAGCCCCTCTTCTTTTGGAA+AGG + chr3_1:92073574-92073593 None:intergenic 45.0%
CGAGGTGAACTCAGAAGAAA+AGG + chr3_1:92073706-92073725 None:intergenic 45.0%
GTCCGAAATGAGTTCGGTTA+TGG - chr3_1:92073768-92073787 Msa0387970:intron 45.0%
GCTTGGGTGTCCAAATTGAT+GGG + chr3_1:92073949-92073968 None:intergenic 45.0%
GTTGAACACTCCCTTTCAAC+AGG + chr3_1:92073971-92073990 None:intergenic 45.0%
!! ACAGATAGAGCTTGTTGTCG+TGG - chr3_1:92074116-92074135 Msa0387970:intron 45.0%
AGTGCGAAGTGGGAAGATTT+CGG + chr3_1:92074726-92074745 None:intergenic 45.0%
TCTGTGTTGAATTCCACTGC+AGG - chr3_1:92074916-92074935 Msa0387970:intron 45.0%
!! ATTCCACTGCAGGAGTATCT+TGG - chr3_1:92074926-92074945 Msa0387970:intron 45.0%
TGGCCGCAAAAAGGAGAAAA+AGG + chr3_1:92074961-92074980 None:intergenic 45.0%
CTAATGCAATGGCCGCAAAA+AGG + chr3_1:92074970-92074989 None:intergenic 45.0%
ACTTCTGTCCCAGAGACAAA+AGG - chr3_1:92075010-92075029 Msa0387970:five_prime_UTR 45.0%
! AGCTCAAGCCTTTTGTCTCT+GGG + chr3_1:92075021-92075040 None:intergenic 45.0%
! AAGCTCAAGCCTTTTGTCTC+TGG + chr3_1:92075022-92075041 None:intergenic 45.0%
!!! TTTATTTTAATGTATTAATT+TGG - chr3_1:92069778-92069797 Msa0387970:intron 5.0%
!!! TAATAAGTTATTTTTATAAA+AGG - chr3_1:92074249-92074268 Msa0387970:intron 5.0%
!!! AATAAGTTATTTTTATAAAA+GGG - chr3_1:92074250-92074269 Msa0387970:intron 5.0%
GAAGAGTGAGCGGTAAGAAG+TGG + chr3_1:92067871-92067890 None:intergenic 50.0%
ACGGTGATGAGAAGAGTGAG+CGG + chr3_1:92067881-92067900 None:intergenic 50.0%
!! AAGCGCAGGAGTATTCTGCT+GGG - chr3_1:92067993-92068012 Msa0387970:intron 50.0%
ATAGCAAGCCACCCAATGCA+GGG + chr3_1:92069145-92069164 None:intergenic 50.0%
AATAGCAAGCCACCCAATGC+AGG + chr3_1:92069146-92069165 None:intergenic 50.0%
!! GCATTGGGTGGCTTGCTATT+TGG - chr3_1:92069146-92069165 Msa0387970:intron 50.0%
!! CGGTGCTACAATTTCACTGC+AGG - chr3_1:92069190-92069209 Msa0387970:intron 50.0%
TCACAGTCACCTGAGCTTAG+CGG - chr3_1:92069295-92069314 Msa0387970:intron 50.0%
TAGGTCAGTGGTTCCCTCTA+TGG - chr3_1:92069464-92069483 Msa0387970:intron 50.0%
AGGTCAGTGGTTCCCTCTAT+GGG - chr3_1:92069465-92069484 Msa0387970:intron 50.0%
GCAGCCCTGTTGTATGTACT+TGG - chr3_1:92069836-92069855 Msa0387970:intron 50.0%
! AACACCAAGTTCTGGTGCTG+TGG + chr3_1:92069876-92069895 None:intergenic 50.0%
! GGAAGGCTGCTTTATGGACT+TGG - chr3_1:92069905-92069924 Msa0387970:intron 50.0%
AGAGTCCCACGGATTTGTGA+TGG + chr3_1:92070055-92070074 None:intergenic 50.0%
CTTCATCGTCTTGGGGATTC+TGG - chr3_1:92070093-92070112 Msa0387970:intron 50.0%
TTAGTACAGTAGGGGGATGG+AGG - chr3_1:92070221-92070240 Msa0387970:intron 50.0%
AAGCAACCACCGAGGAGATT+CGG + chr3_1:92070308-92070327 None:intergenic 50.0%
GTTTCCCTGGGCAAACTAAG+GGG - chr3_1:92070382-92070401 Msa0387970:intron 50.0%
AGGCAGACTTCAACGAGACA+AGG + chr3_1:92070453-92070472 None:intergenic 50.0%
ATCCGAGGCGAGTTTCTTAG+AGG - chr3_1:92070486-92070505 Msa0387970:intron 50.0%
! CACCTCTAAGAAACTCGCCT+CGG + chr3_1:92070491-92070510 None:intergenic 50.0%
! ATTTTCTGCTGCAGCTGACG+CGG - chr3_1:92070863-92070882 Msa0387970:intron 50.0%
! AGAAGACCTCTGCTGATTGG+AGG - chr3_1:92071051-92071070 Msa0387970:intron 50.0%
! GGCTGCCAATTGTTGCTGTT+GGG - chr3_1:92071225-92071244 Msa0387970:intron 50.0%
! GCTGCCAATTGTTGCTGTTG+GGG - chr3_1:92071226-92071245 Msa0387970:intron 50.0%
AACGCCCCAACAGCAACAAT+TGG + chr3_1:92071233-92071252 None:intergenic 50.0%
! CGTTGGTTGCTACCAGGTAA+TGG - chr3_1:92071262-92071281 Msa0387970:intron 50.0%
! TGCTAGGCTCTCCCTTTTTG+AGG + chr3_1:92071435-92071454 None:intergenic 50.0%
GGGTACAAGAGAGGGGAAAA+TGG + chr3_1:92071497-92071516 None:intergenic 50.0%
!! CAAGGGTGCTCTTTAAGGAG+AGG + chr3_1:92072267-92072286 None:intergenic 50.0%
!! GAGGTCAAGGGTGCTCTTTA+AGG + chr3_1:92072272-92072291 None:intergenic 50.0%
!! AAAGAGCACCCTTGACCTCA+AGG - chr3_1:92072273-92072292 Msa0387970:intron 50.0%
!! AAGAGCACCCTTGACCTCAA+GGG - chr3_1:92072274-92072293 Msa0387970:intron 50.0%
CCCAAGTAGTGGTATAGGCT+TGG - chr3_1:92072337-92072356 Msa0387970:intron 50.0%
CCCAAGCCTATACCACTACT+TGG + chr3_1:92072341-92072360 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG + chr3_1:92072382-92072401 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCTC+TGG - chr3_1:92072386-92072405 Msa0387970:intron 50.0%
! CTCTCTGGTGCCAATTTAGG+TGG - chr3_1:92072401-92072420 Msa0387970:exon 50.0%
TCCCAAGTAGCCATTTCAGG+TGG - chr3_1:92072460-92072479 Msa0387970:five_prime_UTR 50.0%
CTCCACCTGAAATGGCTACT+TGG + chr3_1:92072465-92072484 None:intergenic 50.0%
! CAGGTGGAGTATCTTTCCAC+TGG - chr3_1:92072476-92072495 Msa0387970:five_prime_UTR 50.0%
! CTACCAAAGTTCTGGTCCAG+TGG + chr3_1:92072495-92072514 None:intergenic 50.0%
GACAGGAAGATGGTCAAGAG+AGG + chr3_1:92072529-92072548 None:intergenic 50.0%
ACATGAACCCCGGGATGTTA+TGG - chr3_1:92072584-92072603 Msa0387970:five_prime_UTR 50.0%
CAACAGTCCATAACATCCCG+GGG + chr3_1:92072594-92072613 None:intergenic 50.0%
GCAACAGTCCATAACATCCC+GGG + chr3_1:92072595-92072614 None:intergenic 50.0%
CTGTTGCTGTGTTGGGATCT+TGG - chr3_1:92072608-92072627 Msa0387970:five_prime_UTR 50.0%
! GCCTGTAAGGGTGTAACTTG+AGG - chr3_1:92072788-92072807 Msa0387970:five_prime_UTR 50.0%
! GGTTATCACTGGCTGAATGG+TGG + chr3_1:92073062-92073081 None:intergenic 50.0%
TTCACACTCTGTCTGCCCAT+CGG - chr3_1:92073143-92073162 Msa0387970:intron 50.0%
GCTTATCACCCTCAAACCGA+TGG + chr3_1:92073162-92073181 None:intergenic 50.0%
AAATGTAGGGTCACGGTCAC+TGG - chr3_1:92073240-92073259 Msa0387970:intron 50.0%
GCCACATCCAATGCCGAATA+AGG - chr3_1:92073316-92073335 Msa0387970:intron 50.0%
! CCCTTATTCGGCATTGGATG+TGG + chr3_1:92073320-92073339 None:intergenic 50.0%
GGGAGTGGTTGAAGTAAACC+AGG - chr3_1:92073472-92073491 Msa0387970:intron 50.0%
CTTCATTCTTCAGCAGCTGG+AGG + chr3_1:92073631-92073650 None:intergenic 50.0%
TGGCTTCATTCTTCAGCAGC+TGG + chr3_1:92073634-92073653 None:intergenic 50.0%
! AAAGGACGGTGCTGAACTCA+TGG + chr3_1:92073863-92073882 None:intergenic 50.0%
GATGCCTTGTCTCGAAAGGA+CGG + chr3_1:92073877-92073896 None:intergenic 50.0%
AGCTGATGCCTTGTCTCGAA+AGG + chr3_1:92073881-92073900 None:intergenic 50.0%
GGCTTGGGTGTCCAAATTGA+TGG + chr3_1:92073950-92073969 None:intergenic 50.0%
GACACCCAAGCCTGTTGAAA+GGG - chr3_1:92073958-92073977 Msa0387970:intron 50.0%
CACTCCCTTTCAACAGGCTT+GGG + chr3_1:92073965-92073984 None:intergenic 50.0%
ACACTCCCTTTCAACAGGCT+TGG + chr3_1:92073966-92073985 None:intergenic 50.0%
ATCTTCCCACTTCGCACTAG+AGG - chr3_1:92074728-92074747 Msa0387970:intron 50.0%
! TAGAGGACGGGGGATTAGTA+TGG - chr3_1:92074745-92074764 Msa0387970:intron 50.0%
!! AACAGCATTGGCAGCGAAGT+TGG + chr3_1:92074780-92074799 None:intergenic 50.0%
TTCTGGACAGGTTCAAGCGC+AGG - chr3_1:92067979-92067998 Msa0387970:intron 55.0%
!! CAAGCGCAGGAGTATTCTGC+TGG - chr3_1:92067992-92068011 Msa0387970:intron 55.0%
GGTCAGTGGTTCCCTCTATG+GGG - chr3_1:92069466-92069485 Msa0387970:intron 55.0%
TCCCTCTATGGGGCTCTTCT+TGG - chr3_1:92069476-92069495 Msa0387970:intron 55.0%
GCCAAGAAGAGCCCCATAGA+GGG + chr3_1:92069480-92069499 None:intergenic 55.0%
AGCCAAGAAGAGCCCCATAG+AGG + chr3_1:92069481-92069500 None:intergenic 55.0%
GGGAGGAAGCGACAACTCAT+CGG - chr3_1:92069812-92069831 Msa0387970:intron 55.0%
ACTGCCACAGCACCAGAACT+TGG - chr3_1:92069869-92069888 Msa0387970:intron 55.0%
GGGGGATGGAGGTTCATGTA+TGG - chr3_1:92070232-92070251 Msa0387970:intron 55.0%
AGCAACCACCGAGGAGATTC+GGG + chr3_1:92070307-92070326 None:intergenic 55.0%
!! GCTTTGAGAAGCAACCACCG+AGG + chr3_1:92070316-92070335 None:intergenic 55.0%
GGGAGAAGACCTCTGCTGAT+TGG - chr3_1:92071048-92071067 Msa0387970:intron 55.0%
CTGACACCTCCAATCAGCAG+AGG + chr3_1:92071060-92071079 None:intergenic 55.0%
!! CTGCTGATTGGAGGTGTCAG+TGG - chr3_1:92071060-92071079 Msa0387970:intron 55.0%
!! GGAGGTGTCAGTGGCATTGT+AGG - chr3_1:92071069-92071088 Msa0387970:intron 55.0%
GGGCTGCCAATTGTTGCTGT+TGG - chr3_1:92071224-92071243 Msa0387970:intron 55.0%
!! GGGGCGTTGCTTCTTTACGT+TGG - chr3_1:92071245-92071264 Msa0387970:intron 55.0%
AGTGGTATAGGCTTGGGACC+TGG - chr3_1:92072344-92072363 Msa0387970:intron 55.0%
GTGGTATAGGCTTGGGACCT+GGG - chr3_1:92072345-92072364 Msa0387970:intron 55.0%
TCGAACCTGAGACCTTGAGG+AGG + chr3_1:92072379-92072398 None:intergenic 55.0%
TGGGGCTGCAGCTTACCAAT+TGG + chr3_1:92072692-92072711 None:intergenic 55.0%
GTGAAAGTGAGCCTTGCGCA+AGG - chr3_1:92072759-92072778 Msa0387970:intron 55.0%
!! GCAAGGAGTGCTGCCTGTAA+GGG - chr3_1:92072776-92072795 Msa0387970:five_prime_UTR 55.0%
!! TCTGTCTGCCCATCGGTTTG+AGG - chr3_1:92073150-92073169 Msa0387970:intron 55.0%
!! CTGTCTGCCCATCGGTTTGA+GGG - chr3_1:92073151-92073170 Msa0387970:intron 55.0%
GGCTCACCCTTATTCGGCAT+TGG + chr3_1:92073326-92073345 None:intergenic 55.0%
GCCGAATAAGGGTGAGCCAA+AGG - chr3_1:92073328-92073347 Msa0387970:intron 55.0%
GAAGGATTGTCCCCTTCGTC+TGG + chr3_1:92073409-92073428 None:intergenic 55.0%
CCTGATTTAGCTGCATCCCC+TGG + chr3_1:92073493-92073512 None:intergenic 55.0%
CCAGGGGATGCAGCTAAATC+AGG - chr3_1:92073490-92073509 Msa0387970:intron 55.0%
AGCACCGTCCTTTCGAGACA+AGG - chr3_1:92073870-92073889 Msa0387970:intron 55.0%
! CAAGGCATCAGCTGCAGTCT+TGG - chr3_1:92073888-92073907 Msa0387970:intron 55.0%
GGACACCCAAGCCTGTTGAA+AGG - chr3_1:92073957-92073976 Msa0387970:intron 55.0%
! TGGGCCGATAAGTTGGCTGA+TGG - chr3_1:92074697-92074716 Msa0387970:intron 55.0%
TCCCACTTCGCACTAGAGGA+CGG - chr3_1:92074732-92074751 Msa0387970:intron 55.0%
GCTCCAAGATACTCCTGCAG+TGG + chr3_1:92074932-92074951 None:intergenic 55.0%
CAAGCGACACCGCTAAGCTC+AGG + chr3_1:92069307-92069326 None:intergenic 60.0%
!! CTGAGCTTAGCGGTGTCGCT+TGG - chr3_1:92069305-92069324 Msa0387970:intron 60.0%
CGACTCTCCCCGAATCTCCT+CGG - chr3_1:92070296-92070315 Msa0387970:intron 60.0%
GCAACCACCGAGGAGATTCG+GGG + chr3_1:92070306-92070325 None:intergenic 60.0%
AAACTAAGGGGCCGGCCACT+TGG - chr3_1:92070394-92070413 Msa0387970:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG + chr3_1:92072365-92072384 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG - chr3_1:92072364-92072383 Msa0387970:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG - chr3_1:92072371-92072390 Msa0387970:intron 60.0%
GGTGGCTGAGACATGAACCC+CGG - chr3_1:92072574-92072593 Msa0387970:five_prime_UTR 60.0%
GTGGCTGAGACATGAACCCC+GGG - chr3_1:92072575-92072594 Msa0387970:five_prime_UTR 60.0%
!! CGCAAGGAGTGCTGCCTGTA+AGG - chr3_1:92072775-92072794 Msa0387970:five_prime_UTR 60.0%
TCAGCAGCTGGAGGCCATTC+TGG + chr3_1:92073622-92073641 None:intergenic 60.0%
CCCGTCCTCTAGTGCGAAGT+GGG + chr3_1:92074736-92074755 None:intergenic 60.0%
CCCACTTCGCACTAGAGGAC+GGG - chr3_1:92074733-92074752 Msa0387970:intron 60.0%
CCACTTCGCACTAGAGGACG+GGG - chr3_1:92074734-92074753 Msa0387970:intron 60.0%
CACTTCGCACTAGAGGACGG+GGG - chr3_1:92074735-92074754 Msa0387970:intron 60.0%
CTCTCCCCGAATCTCCTCGG+TGG - chr3_1:92070299-92070318 Msa0387970:intron 65.0%
!! CCGGCCCCTTAGTTTGCCCA+GGG + chr3_1:92070389-92070408 None:intergenic 65.0%
CCCTGGGCAAACTAAGGGGC+CGG - chr3_1:92070386-92070405 Msa0387970:intron 65.0%
CAGGCAGCACTCCTTGCGCA+AGG + chr3_1:92072773-92072792 None:intergenic 65.0%
CCCCGTCCTCTAGTGCGAAG+TGG + chr3_1:92074737-92074756 None:intergenic 65.0%
!! GCCGGCCCCTTAGTTTGCCC+AGG + chr3_1:92070390-92070409 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 92067565 92075323 92067565 ID=Msa0387970;Name=Msa0387970
chr3_1 mRNA 92067565 92075323 92067565 ID=Msa0387970-mRNA-1;Parent=Msa0387970;Name=Msa0387970-mRNA-1;_AED=0.21;_eAED=0.21;_QI=1147|1|1|1|0.85|0.86|15|251|201
chr3_1 exon 92067565 92067950 92067565 ID=Msa0387970-mRNA-1:exon:25836;Parent=Msa0387970-mRNA-1
chr3_1 exon 92068062 92068199 92068062 ID=Msa0387970-mRNA-1:exon:25835;Parent=Msa0387970-mRNA-1
chr3_1 exon 92071611 92071709 92071611 ID=Msa0387970-mRNA-1:exon:25834;Parent=Msa0387970-mRNA-1
chr3_1 exon 92071802 92071882 92071802 ID=Msa0387970-mRNA-1:exon:25833;Parent=Msa0387970-mRNA-1
chr3_1 exon 92071971 92072033 92071971 ID=Msa0387970-mRNA-1:exon:25832;Parent=Msa0387970-mRNA-1
chr3_1 exon 92072130 92072177 92072130 ID=Msa0387970-mRNA-1:exon:25831;Parent=Msa0387970-mRNA-1
chr3_1 exon 92072318 92072339 92072318 ID=Msa0387970-mRNA-1:exon:25830;Parent=Msa0387970-mRNA-1
chr3_1 exon 92072396 92072695 92072396 ID=Msa0387970-mRNA-1:exon:25829;Parent=Msa0387970-mRNA-1
chr3_1 exon 92072774 92072875 92072774 ID=Msa0387970-mRNA-1:exon:25828;Parent=Msa0387970-mRNA-1
chr3_1 exon 92072951 92073075 92072951 ID=Msa0387970-mRNA-1:exon:25827;Parent=Msa0387970-mRNA-1
chr3_1 exon 92073355 92073421 92073355 ID=Msa0387970-mRNA-1:exon:25826;Parent=Msa0387970-mRNA-1
chr3_1 exon 92073528 92073587 92073528 ID=Msa0387970-mRNA-1:exon:25825;Parent=Msa0387970-mRNA-1
chr3_1 exon 92073677 92073755 92073677 ID=Msa0387970-mRNA-1:exon:25824;Parent=Msa0387970-mRNA-1
chr3_1 exon 92074811 92074899 92074811 ID=Msa0387970-mRNA-1:exon:25823;Parent=Msa0387970-mRNA-1
chr3_1 exon 92074979 92075323 92074979 ID=Msa0387970-mRNA-1:exon:25822;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92074979 92075323 92074979 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92074811 92074899 92074811 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92073677 92073755 92073677 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92073528 92073587 92073528 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92073355 92073421 92073355 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92072951 92073075 92072951 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92072774 92072875 92072774 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 five_prime_UTR 92072416 92072695 92072416 ID=Msa0387970-mRNA-1:five_prime_utr;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92072396 92072415 92072396 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92072318 92072339 92072318 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92072130 92072177 92072130 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92071971 92072033 92071971 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92071802 92071882 92071802 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92071611 92071709 92071611 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92068062 92068199 92068062 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 CDS 92067816 92067950 92067816 ID=Msa0387970-mRNA-1:cds;Parent=Msa0387970-mRNA-1
chr3_1 three_prime_UTR 92067565 92067815 92067565 ID=Msa0387970-mRNA-1:three_prime_utr;Parent=Msa0387970-mRNA-1
Gene Sequence

>Msa0387970

ATGAAGATCAGGAATCCGAGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCAGGTCCCATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCTGACGCGGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTAGTAATGACATCGGTTGCTGTCCTAAAAGTGGACGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCTTATCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTCGGAGGGCTGCCAATTGTTGCTGTTGGGGCGTTGCTTCTTTACGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTGATGGTATCCGAAATCTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTCGCTGCCAATGCTGTTGTTACCTTTGCATTCTCACCATTGAAGGAGTATCTTGGAGCAGAGAACCTTTTTCTCCTTTTTGCGGCCATTGCATTAGTGTCACTTGTGTTCATTGTAACTTCTGTCCCAGAGACAAAAGGCTTGAGCTTAGAAGAAATTGAATCCAAAATCTTGAAGTGA
Protein sequence

>Msa0387970

MKIRNPRGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGAENLFLLFAAIALVSLVFIVTSVPETKGLSLEEIESKILK*