Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346790 | XP_003598052.1 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346790 | G7J060 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0346790 | 0.822834 | 1.915681e-53 | -8.615850e-47 |
| Msa0012380 | Msa0346790 | 0.844904 | 5.662021e-59 | -8.615850e-47 |
| Msa0034940 | Msa0346790 | 0.807554 | 4.776187e-50 | -8.615850e-47 |
| Msa0040550 | Msa0346790 | -0.830981 | 2.162280e-55 | -8.615850e-47 |
| Msa0044250 | Msa0346790 | 0.809902 | 1.503638e-50 | -8.615850e-47 |
| Msa0046360 | Msa0346790 | 0.810161 | 1.322862e-50 | -8.615850e-47 |
| Msa0051600 | Msa0346790 | 0.811205 | 7.864763e-51 | -8.615850e-47 |
| Msa0054760 | Msa0346790 | 0.815067 | 1.117835e-51 | -8.615850e-47 |
| Msa0057530 | Msa0346790 | 0.813325 | 2.710148e-51 | -8.615850e-47 |
| Msa0064550 | Msa0346790 | 0.846055 | 2.761809e-59 | -8.615850e-47 |
| Msa0089510 | Msa0346790 | 0.823311 | 1.482839e-53 | -8.615850e-47 |
| Msa0089520 | Msa0346790 | 0.822407 | 2.408651e-53 | -8.615850e-47 |
| Msa0091470 | Msa0346790 | 0.833652 | 4.716561e-56 | -8.615850e-47 |
| Msa0092680 | Msa0346790 | 0.811705 | 6.124067e-51 | -8.615850e-47 |
| Msa0092730 | Msa0346790 | 0.800059 | 1.721465e-48 | -8.615850e-47 |
| Msa0108070 | Msa0346790 | 0.800919 | 1.149614e-48 | -8.615850e-47 |
| Msa0109490 | Msa0346790 | 0.827581 | 1.445870e-54 | -8.615850e-47 |
| Msa0137600 | Msa0346790 | 0.810549 | 1.090876e-50 | -8.615850e-47 |
| Msa0140290 | Msa0346790 | 0.841225 | 5.406201e-58 | -8.615850e-47 |
| Msa0154220 | Msa0346790 | 0.804557 | 2.039853e-49 | -8.615850e-47 |
| Msa0154240 | Msa0346790 | 0.851880 | 6.653572e-61 | -8.615850e-47 |
| Msa0154270 | Msa0346790 | 0.849672 | 2.782850e-60 | -8.615850e-47 |
| Msa0163960 | Msa0346790 | 0.805340 | 1.399600e-49 | -8.615850e-47 |
| Msa0171920 | Msa0346790 | 0.830805 | 2.387356e-55 | -8.615850e-47 |
| Msa0175670 | Msa0346790 | 0.811723 | 6.070196e-51 | -8.615850e-47 |
| Msa0175810 | Msa0346790 | 0.802681 | 4.999651e-49 | -8.615850e-47 |
| Msa0178940 | Msa0346790 | 0.818554 | 1.845280e-52 | -8.615850e-47 |
| Msa0197030 | Msa0346790 | 0.869372 | 3.253709e-66 | -8.615850e-47 |
| Msa0199740 | Msa0346790 | 0.844300 | 8.235266e-59 | -8.615850e-47 |
| Msa0224370 | Msa0346790 | 0.822583 | 2.191440e-53 | -8.615850e-47 |
| Msa0224400 | Msa0346790 | 0.824754 | 6.799538e-54 | -8.615850e-47 |
| Msa0238860 | Msa0346790 | 0.815683 | 8.153920e-52 | -8.615850e-47 |
| Msa0240640 | Msa0346790 | 0.879245 | 1.458095e-69 | -8.615850e-47 |
| Msa0242290 | Msa0346790 | 0.837021 | 6.646093e-57 | -8.615850e-47 |
| Msa0253160 | Msa0346790 | 0.830271 | 3.225395e-55 | -8.615850e-47 |
| Msa0258700 | Msa0346790 | -0.812339 | 4.455726e-51 | -8.615850e-47 |
| Msa0265580 | Msa0346790 | 0.838108 | 3.497577e-57 | -8.615850e-47 |
| Msa0276590 | Msa0346790 | 0.823594 | 1.273299e-53 | -8.615850e-47 |
| Msa0291940 | Msa0346790 | 0.827609 | 1.423246e-54 | -8.615850e-47 |
| Msa0295570 | Msa0346790 | 0.826316 | 2.901118e-54 | -8.615850e-47 |
| Msa0297950 | Msa0346790 | -0.802227 | 6.200215e-49 | -8.615850e-47 |
| Msa0303440 | Msa0346790 | 0.849823 | 2.525361e-60 | -8.615850e-47 |
| Msa0303500 | Msa0346790 | 0.835217 | 1.908669e-56 | -8.615850e-47 |
| Msa0306160 | Msa0346790 | 0.819004 | 1.458141e-52 | -8.615850e-47 |
| Msa0308570 | Msa0346790 | 0.800059 | 1.721407e-48 | -8.615850e-47 |
| Msa0311570 | Msa0346790 | 0.829961 | 3.838972e-55 | -8.615850e-47 |
| Msa0319710 | Msa0346790 | 0.820321 | 7.296435e-53 | -8.615850e-47 |
| Msa0334020 | Msa0346790 | 0.802794 | 4.738467e-49 | -8.615850e-47 |
| Msa0334980 | Msa0346790 | 0.801513 | 8.692726e-49 | -8.615850e-47 |
| Msa0335890 | Msa0346790 | -0.816327 | 5.856346e-52 | -8.615850e-47 |
| Msa0344680 | Msa0346790 | 0.885472 | 7.898518e-72 | -8.615850e-47 |
| Msa0346790 | Msa0347060 | 0.801194 | 1.010063e-48 | -8.615850e-47 |
| Msa0346790 | Msa0353040 | -0.811664 | 6.252927e-51 | -8.615850e-47 |
| Msa0346790 | Msa0354390 | 0.818182 | 2.240595e-52 | -8.615850e-47 |
| Msa0346790 | Msa0377280 | 0.822362 | 2.467490e-53 | -8.615850e-47 |
| Msa0346790 | Msa0380650 | 0.852315 | 5.004869e-61 | -8.615850e-47 |
| Msa0346790 | Msa0382590 | 0.828828 | 7.234915e-55 | -8.615850e-47 |
| Msa0346790 | Msa0387790 | 0.817083 | 3.963822e-52 | -8.615850e-47 |
| Msa0346790 | Msa0387970 | 0.865690 | 4.919461e-65 | -8.615850e-47 |
| Msa0346790 | Msa0392050 | 0.885316 | 9.031931e-72 | -8.615850e-47 |
| Msa0346790 | Msa0392540 | 0.937784 | 1.972060e-98 | -8.615850e-47 |
| Msa0346790 | Msa0400060 | -0.801141 | 1.035678e-48 | -8.615850e-47 |
| Msa0346790 | Msa0400900 | 0.835475 | 1.642421e-56 | -8.615850e-47 |
| Msa0346790 | Msa0401340 | 0.835848 | 1.321271e-56 | -8.615850e-47 |
| Msa0346790 | Msa0404060 | 0.819425 | 1.169455e-52 | -8.615850e-47 |
| Msa0346790 | Msa0404690 | 0.828064 | 1.106424e-54 | -8.615850e-47 |
| Msa0346790 | Msa0421720 | 0.824451 | 8.015940e-54 | -8.615850e-47 |
| Msa0346790 | Msa0425320 | 0.817084 | 3.961455e-52 | -8.615850e-47 |
| Msa0346790 | Msa0430290 | 0.853500 | 2.293116e-61 | -8.615850e-47 |
| Msa0346790 | Msa0432720 | 0.852980 | 3.232353e-61 | -8.615850e-47 |
| Msa0346790 | Msa0440310 | 0.960902 | 4.377195e-119 | -8.615850e-47 |
| Msa0346790 | Msa0448120 | 0.817151 | 3.827082e-52 | -8.615850e-47 |
| Msa0346790 | Msa0469950 | 0.885911 | 5.402293e-72 | -8.615850e-47 |
| Msa0346790 | Msa0471760 | 0.816993 | 4.151786e-52 | -8.615850e-47 |
| Msa0346790 | Msa0481490 | 0.824987 | 5.991665e-54 | -8.615850e-47 |
| Msa0346790 | Msa0487490 | 0.921200 | 4.850810e-88 | -8.615850e-47 |
| Msa0346790 | Msa0512310 | 0.828149 | 1.055768e-54 | -8.615850e-47 |
| Msa0346790 | Msa0515460 | 0.815910 | 7.257612e-52 | -8.615850e-47 |
| Msa0346790 | Msa0525270 | 0.865309 | 6.485456e-65 | -8.615850e-47 |
| Msa0346790 | Msa0525280 | 0.868384 | 6.798620e-66 | -8.615850e-47 |
| Msa0346790 | Msa0530340 | 0.855360 | 6.648453e-62 | -8.615850e-47 |
| Msa0346790 | Msa0545230 | 0.829620 | 4.648487e-55 | -8.615850e-47 |
| Msa0346790 | Msa0548210 | 0.859279 | 4.618028e-63 | -8.615850e-47 |
| Msa0346790 | Msa0549540 | 0.874803 | 5.075507e-68 | -8.615850e-47 |
| Msa0346790 | Msa0556070 | 0.826164 | 3.152674e-54 | -8.615850e-47 |
| Msa0346790 | Msa0569230 | 0.803176 | 3.949194e-49 | -8.615850e-47 |
| Msa0346790 | Msa0569930 | 0.800946 | 1.135387e-48 | -8.615850e-47 |
| Msa0346790 | Msa0577050 | 0.812769 | 3.587689e-51 | -8.615850e-47 |
| Msa0346790 | Msa0583740 | 0.816062 | 6.709742e-52 | -8.615850e-47 |
| Msa0346790 | Msa0600820 | 0.814807 | 1.276176e-51 | -8.615850e-47 |
| Msa0346790 | Msa0604880 | 0.872832 | 2.348101e-67 | -8.615850e-47 |
| Msa0346790 | Msa0605250 | 0.839560 | 1.473202e-57 | -8.615850e-47 |
| Msa0346790 | Msa0608780 | 0.805348 | 1.394230e-49 | -8.615850e-47 |
| Msa0346790 | Msa0609790 | 0.801539 | 8.585074e-49 | -8.615850e-47 |
| Msa0346790 | Msa0622250 | 0.841204 | 5.476760e-58 | -8.615850e-47 |
| Msa0346790 | Msa0627050 | 0.885674 | 6.635433e-72 | -8.615850e-47 |
| Msa0346790 | Msa0633720 | 0.811503 | 6.778471e-51 | -8.615850e-47 |
| Msa0346790 | Msa0636720 | 0.803784 | 2.955501e-49 | -8.615850e-47 |
| Msa0346790 | Msa0644630 | 0.846314 | 2.348359e-59 | -8.615850e-47 |
| Msa0346790 | Msa0645820 | 0.807810 | 4.214048e-50 | -8.615850e-47 |
| Msa0346790 | Msa0646190 | 0.871499 | 6.525909e-67 | -8.615850e-47 |
| Msa0346790 | Msa0646340 | 0.863460 | 2.450131e-64 | -8.615850e-47 |
| Msa0346790 | Msa0649250 | 0.802450 | 5.578051e-49 | -8.615850e-47 |
| Msa0346790 | Msa0649310 | 0.827745 | 1.319944e-54 | -8.615850e-47 |
| Msa0346790 | Msa0654880 | 0.803817 | 2.908574e-49 | -8.615850e-47 |
| Msa0346790 | Msa0660070 | 0.818499 | 1.898923e-52 | -8.615850e-47 |
| Msa0346790 | Msa0675010 | 0.848258 | 6.871317e-60 | -8.615850e-47 |
| Msa0346790 | Msa0681210 | 0.804525 | 2.071420e-49 | -8.615850e-47 |
| Msa0346790 | Msa0685890 | 0.857946 | 1.153686e-62 | -8.615850e-47 |
| Msa0346790 | Msa0693400 | 0.823609 | 1.263137e-53 | -8.615850e-47 |
| Msa0346790 | Msa0698650 | 0.801962 | 7.027763e-49 | -8.615850e-47 |
| Msa0346790 | Msa0705810 | 0.816548 | 5.225426e-52 | -8.615850e-47 |
| Msa0346790 | Msa0729550 | 0.804110 | 2.528584e-49 | -8.615850e-47 |
| Msa0346790 | Msa0740210 | 0.804647 | 1.953902e-49 | -8.615850e-47 |
| Msa0346790 | Msa0748330 | 0.834708 | 2.564385e-56 | -8.615850e-47 |
| Msa0346790 | Msa0749150 | 0.839223 | 1.801453e-57 | -8.615850e-47 |
| Msa0346790 | Msa0761640 | 0.804510 | 2.086999e-49 | -8.615850e-47 |
| Msa0346790 | Msa0769830 | 0.805604 | 1.232325e-49 | -8.615850e-47 |
| Msa0346790 | Msa0775580 | 0.800354 | 1.498884e-48 | -8.615850e-47 |
| Msa0346790 | Msa0777500 | -0.800554 | 1.364918e-48 | -8.615850e-47 |
| Msa0346790 | Msa0780140 | 0.802746 | 4.846332e-49 | -8.615850e-47 |
| Msa0346790 | Msa0781390 | 0.815854 | 7.466676e-52 | -8.615850e-47 |
| Msa0346790 | Msa0786100 | 0.821724 | 3.467087e-53 | -8.615850e-47 |
| Msa0346790 | Msa0792880 | 0.828957 | 6.732937e-55 | -8.615850e-47 |
| Msa0346790 | Msa0793100 | 0.839316 | 1.704813e-57 | -8.615850e-47 |
| Msa0346790 | Msa0806720 | 0.862013 | 6.842616e-64 | -8.615850e-47 |
| Msa0346790 | Msa0806760 | 0.874185 | 8.227151e-68 | -8.615850e-47 |
| Msa0346790 | Msa0812970 | 0.803885 | 2.815206e-49 | -8.615850e-47 |
| Msa0346790 | Msa0824140 | 0.808951 | 2.406241e-50 | -8.615850e-47 |
| Msa0346790 | Msa0828570 | 0.806176 | 9.342570e-50 | -8.615850e-47 |
| Msa0346790 | Msa0828900 | 0.837008 | 6.695787e-57 | -8.615850e-47 |
| Msa0346790 | Msa0848760 | 0.805101 | 1.570284e-49 | -8.615850e-47 |
| Msa0346790 | Msa0855090 | -0.805528 | 1.278093e-49 | -8.615850e-47 |
| Msa0346790 | Msa0860920 | 0.811346 | 7.329823e-51 | -8.615850e-47 |
| Msa0346790 | Msa0863250 | 0.805988 | 1.023411e-49 | -8.615850e-47 |
| Msa0346790 | Msa0876270 | 0.822653 | 2.111606e-53 | -8.615850e-47 |
| Msa0346790 | Msa0882700 | 0.833002 | 6.849469e-56 | -8.615850e-47 |
| Msa0346790 | Msa0904630 | 0.818382 | 2.018623e-52 | -8.615850e-47 |
| Msa0346790 | Msa0909720 | 0.841030 | 6.083281e-58 | -8.615850e-47 |
| Msa0346790 | Msa0910010 | 0.811748 | 5.993280e-51 | -8.615850e-47 |
| Msa0346790 | Msa0936650 | 0.800743 | 1.249175e-48 | -8.615850e-47 |
| Msa0346790 | Msa0936690 | 0.809311 | 2.015075e-50 | -8.615850e-47 |
| Msa0346790 | Msa0944690 | 0.867630 | 1.188054e-65 | -8.615850e-47 |
| Msa0346790 | Msa0945960 | 0.871136 | 8.599939e-67 | -8.615850e-47 |
| Msa0346790 | Msa0964680 | 0.800088 | 1.698277e-48 | -8.615850e-47 |
| Msa0346790 | Msa0968780 | 0.867071 | 1.793095e-65 | -8.615850e-47 |
| Msa0346790 | Msa0970050 | 0.805155 | 1.530046e-49 | -8.615850e-47 |
| Msa0346790 | Msa0984000 | 0.869849 | 2.274065e-66 | -8.615850e-47 |
| Msa0346790 | Msa1014350 | 0.801987 | 6.946011e-49 | -8.615850e-47 |
| Msa0346790 | Msa1014700 | 0.818645 | 1.759203e-52 | -8.615850e-47 |
| Msa0346790 | Msa1034930 | 0.827955 | 1.175556e-54 | -8.615850e-47 |
| Msa0346790 | Msa1063920 | 0.811356 | 7.293413e-51 | -8.615850e-47 |
| Msa0346790 | Msa1069960 | 0.838833 | 2.274121e-57 | -8.615850e-47 |
| Msa0346790 | Msa1079480 | 0.828543 | 8.481248e-55 | -8.615850e-47 |
| Msa0346790 | Msa1080620 | 0.826137 | 3.198689e-54 | -8.615850e-47 |
| Msa0346790 | Msa1080690 | 0.819549 | 1.095519e-52 | -8.615850e-47 |
| Msa0346790 | Msa1082150 | 0.854730 | 1.013157e-61 | -8.615850e-47 |
| Msa0346790 | Msa1083460 | 0.810422 | 1.162135e-50 | -8.615850e-47 |
| Msa0346790 | Msa1093390 | 0.819589 | 1.072680e-52 | -8.615850e-47 |
| Msa0346790 | Msa1108140 | 0.807550 | 4.785671e-50 | -8.615850e-47 |
| Msa0346790 | Msa1118460 | 0.825684 | 4.098596e-54 | -8.615850e-47 |
| Msa0346790 | Msa1119860 | 0.837138 | 6.201933e-57 | -8.615850e-47 |
| Msa0346790 | Msa1122720 | 0.815988 | 6.970104e-52 | -8.615850e-47 |
| Msa0346790 | Msa1131900 | 0.825290 | 5.081560e-54 | -8.615850e-47 |
| Msa0346790 | Msa1144730 | 0.882764 | 7.923536e-71 | -8.615850e-47 |
| Msa0346790 | Msa1144950 | 0.808920 | 2.443614e-50 | -8.615850e-47 |
| Msa0346790 | Msa1157030 | 0.804148 | 2.481941e-49 | -8.615850e-47 |
| Msa0346790 | Msa1167160 | 0.807633 | 4.594358e-50 | -8.615850e-47 |
| Msa0346790 | Msa1173380 | 0.855434 | 6.326073e-62 | -8.615850e-47 |
| Msa0346790 | Msa1177240 | 0.819280 | 1.261834e-52 | -8.615850e-47 |
| Msa0346790 | Msa1180050 | 0.806515 | 7.924694e-50 | -8.615850e-47 |
| Msa0346790 | Msa1181510 | 0.804697 | 1.907204e-49 | -8.615850e-47 |
| Msa0346790 | Msa1182800 | 0.854533 | 1.155435e-61 | -8.615850e-47 |
| Msa0346790 | Msa1182830 | 0.811011 | 8.664621e-51 | -8.615850e-47 |
| Msa0346790 | Msa1184010 | 0.841608 | 4.286461e-58 | -8.615850e-47 |
| Msa0346790 | Msa1194330 | 0.802053 | 6.732405e-49 | -8.615850e-47 |
| Msa0346790 | Msa1209800 | 0.809075 | 2.263775e-50 | -8.615850e-47 |
| Msa0346790 | Msa1226880 | 0.812315 | 4.510552e-51 | -8.615850e-47 |
| Msa0346790 | Msa1228350 | 0.826205 | 3.081682e-54 | -8.615850e-47 |
| Msa0346790 | Msa1232270 | 0.806588 | 7.647316e-50 | -8.615850e-47 |
| Msa0346790 | Msa1233770 | 0.806531 | 7.862090e-50 | -8.615850e-47 |
| Msa0346790 | Msa1239900 | 0.808698 | 2.725052e-50 | -8.615850e-47 |
| Msa0346790 | Msa1243730 | 0.801690 | 7.994467e-49 | -8.615850e-47 |
| Msa0346790 | Msa1270770 | 0.801208 | 1.003490e-48 | -8.615850e-47 |
| Msa0346790 | Msa1276080 | 0.807691 | 4.465916e-50 | -8.615850e-47 |
| Msa0346790 | Msa1281270 | 0.822867 | 1.882803e-53 | -8.615850e-47 |
| Msa0346790 | Msa1317030 | 0.828383 | 9.270179e-55 | -8.615850e-47 |
| Msa0346790 | Msa1320380 | 0.821511 | 3.883390e-53 | -8.615850e-47 |
| Msa0346790 | Msa1338590 | 0.817413 | 3.341182e-52 | -8.615850e-47 |
| Msa0346790 | Msa1349810 | 0.838382 | 2.972646e-57 | -8.615850e-47 |
| Msa0346790 | Msa1354090 | 0.818041 | 2.410114e-52 | -8.615850e-47 |
| Msa0346790 | Msa1358340 | 0.849760 | 2.629824e-60 | -8.615850e-47 |
| Msa0346790 | Msa1359890 | 0.861672 | 8.704103e-64 | -8.615850e-47 |
| Msa0346790 | Msa1369180 | 0.813937 | 1.987470e-51 | -8.615850e-47 |
| Msa0346790 | Msa1380720 | 0.820500 | 6.639615e-53 | -8.615850e-47 |
| Msa0346790 | Msa1394900 | 0.869001 | 4.293099e-66 | -8.615850e-47 |
| Msa0346790 | Msa1404690 | 0.822214 | 2.669738e-53 | -8.615850e-47 |
| Msa0346790 | Msa1405380 | 0.831403 | 1.702806e-55 | -8.615850e-47 |
| Msa0346790 | Msa1406020 | 0.871946 | 4.636133e-67 | -8.615850e-47 |
| Msa0346790 | Msa1418200 | 0.800549 | 1.368151e-48 | -8.615850e-47 |
| Msa0346790 | Msa1434660 | 0.822954 | 1.796791e-53 | -8.615850e-47 |
| Msa0346790 | Msa1443550 | 0.812303 | 4.536317e-51 | -8.615850e-47 |
| Msa0346790 | Msa1456620 | 0.829635 | 4.609766e-55 | -8.615850e-47 |
| Msa0346790 | Msa1459540 | 0.843772 | 1.140447e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346790 | MtrunA17_Chr3g0077631 | 93.538 | 325 | 19 | 1 | 1 | 325 | 1 | 323 | 0.0 | 612 |
| Msa0346790 | MtrunA17_Chr1g0178631 | 39.819 | 221 | 125 | 4 | 104 | 321 | 119 | 334 | 3.37e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346790 | AT4G10000.1 | 69.286 | 280 | 85 | 1 | 43 | 322 | 51 | 329 | 2.11e-145 | 413 |
| Msa0346790 | AT4G10000.2 | 69.286 | 280 | 85 | 1 | 43 | 322 | 51 | 329 | 2.11e-145 | 413 |
| Msa0346790 | AT5G03880.1 | 42.534 | 221 | 120 | 4 | 103 | 322 | 125 | 339 | 3.79e-54 | 180 |
Find 79 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAAATTCTTACTTCTT+TGG | 0.175708 | 3_1:-7516010 | None:intergenic |
| TCCCGTACCCTTCTACAAAA+AGG | 0.249924 | 3_1:-7513461 | None:intergenic |
| TGACATTGTGGGAACGTTCT+AGG | 0.276954 | 3_1:+7515307 | Msa0346790:CDS |
| AAAGAACTGATTATTCAAAA+TGG | 0.284949 | 3_1:+7516655 | Msa0346790:three_prime_UTR |
| GAGAACAGCTCCAGCTTTCT+AGG | 0.290385 | 3_1:-7515342 | None:intergenic |
| AAGTTACTCTTGGATGCTTC+TGG | 0.294502 | 3_1:+7515985 | Msa0346790:CDS |
| GCAAAATTACGTTGTCTAGA+AGG | 0.342024 | 3_1:-7511385 | None:intergenic |
| CTGTGTCTTACAGAACCTTT+AGG | 0.352920 | 3_1:-7513942 | None:intergenic |
| GAATAGGTTTCGAACAAATA+AGG | 0.364256 | 3_1:-7516499 | None:intergenic |
| AAAATTTCGTTTGAAGAAAG+TGG | 0.378378 | 3_1:-7516541 | None:intergenic |
| TAGGTTTATCCTTGTCCTAA+AGG | 0.380454 | 3_1:+7513927 | Msa0346790:intron |
| CTATAAATTATCCGACGAAT+AGG | 0.383781 | 3_1:-7516515 | None:intergenic |
| AAATACTTGTTCGAGCGATA+TGG | 0.384640 | 3_1:+7515106 | Msa0346790:CDS |
| AGAGAGGTGGTCAGAGAAAC+TGG | 0.386180 | 3_1:+7513963 | Msa0346790:CDS |
| ACAACTTTAAATAGCCTTTG+TGG | 0.397151 | 3_1:-7516580 | None:intergenic |
| CTACCTGCTCGTAGAATTGT+TGG | 0.397799 | 3_1:-7515279 | None:intergenic |
| TTCCTCATTGATCAAAATAG+TGG | 0.408697 | 3_1:+7514869 | Msa0346790:CDS |
| TTACTTACTGCTTTCATACA+TGG | 0.414336 | 3_1:-7514897 | None:intergenic |
| TTGAGTTTAAGACTTGGAAT+TGG | 0.425401 | 3_1:-7511010 | None:intergenic |
| TTGAAAGTGCATCGAGTAAA+GGG | 0.440724 | 3_1:+7513050 | Msa0346790:CDS |
| CACAACACTGGATTTCAATC+TGG | 0.442131 | 3_1:+7516457 | Msa0346790:CDS |
| CCTTACATTCTTCAAAATGT+AGG | 0.449859 | 3_1:+7515943 | Msa0346790:CDS |
| AGAAGGGAGAAGTCCATCAT+TGG | 0.461743 | 3_1:+7515129 | Msa0346790:CDS |
| GCGTGAGGCATTATGCGAAT+TGG | 0.471814 | 3_1:+7515915 | Msa0346790:CDS |
| GGGACAGAGAAAGGAGAGAA+AGG | 0.477524 | 3_1:-7511125 | None:intergenic |
| AAGACTTGGAATTGGTATGC+TGG | 0.478696 | 3_1:-7511002 | None:intergenic |
| GACATTGTGGGAACGTTCTA+GGG | 0.479537 | 3_1:+7515308 | Msa0346790:CDS |
| ATTGAAAGTGCATCGAGTAA+AGG | 0.482082 | 3_1:+7513049 | Msa0346790:CDS |
| GGAAGGAGTTGAACTTGAAG+TGG | 0.485002 | 3_1:-7511101 | None:intergenic |
| CTTGAGCAAGGGACAGAGAA+AGG | 0.496483 | 3_1:-7511134 | None:intergenic |
| AGAAAGGAGAGAAAGGAGGA+AGG | 0.497341 | 3_1:-7511118 | None:intergenic |
| CCATGCAAACCTTGATGTGC+TGG | 0.497874 | 3_1:-7513011 | None:intergenic |
| AGCTCCAGCTTTCTAGGAGG+AGG | 0.503068 | 3_1:-7515336 | None:intergenic |
| CTCTCTAAAAGTCCCAATGA+TGG | 0.508740 | 3_1:-7515142 | None:intergenic |
| GTTATGCCGTAGAGAGTGTT+GGG | 0.510011 | 3_1:-7510974 | None:intergenic |
| CTTCCTTGGCCAGCACATCA+AGG | 0.515024 | 3_1:+7513002 | Msa0346790:CDS |
| GAAGGGAGAAGTCCATCATT+GGG | 0.519221 | 3_1:+7515130 | Msa0346790:CDS |
| CCAGCACATCAAGGTTTGCA+TGG | 0.519241 | 3_1:+7513011 | Msa0346790:CDS |
| TACTTTGTTGATCACAACAC+TGG | 0.521271 | 3_1:+7516445 | Msa0346790:CDS |
| ACGACGAACGAAGTTACTCT+TGG | 0.522523 | 3_1:+7515975 | Msa0346790:CDS |
| ATTCTTCAAAATGTAGGAGA+AGG | 0.523180 | 3_1:+7515949 | Msa0346790:CDS |
| ATAGCTAGCGACATCTTCCT+TGG | 0.523692 | 3_1:+7512988 | Msa0346790:intron |
| TGAACCTCCTCCTAGAAAGC+TGG | 0.527393 | 3_1:+7515332 | Msa0346790:CDS |
| GTGTTGTGATCAACAAAGTA+AGG | 0.529816 | 3_1:-7516442 | None:intergenic |
| TTGTTCGAGCGATATGGAGA+AGG | 0.531686 | 3_1:+7515112 | Msa0346790:CDS |
| CAGCACATCAAGGTTTGCAT+GGG | 0.532656 | 3_1:+7513012 | Msa0346790:CDS |
| TTGCGCAGCACTATCTTCAC+TGG | 0.541182 | 3_1:+7515249 | Msa0346790:intron |
| AGACTTGGAATTGGTATGCT+GGG | 0.545385 | 3_1:-7511001 | None:intergenic |
| ACAATTCTACGAGCAGGTAG+AGG | 0.551144 | 3_1:+7515282 | Msa0346790:CDS |
| TACAGAGAAAAGCTTGAGCA+AGG | 0.557845 | 3_1:-7511146 | None:intergenic |
| ACAGAGAAAGGAGAGAAAGG+AGG | 0.558500 | 3_1:-7511122 | None:intergenic |
| TCAGTTCCCAACACTCTCTA+CGG | 0.566588 | 3_1:+7510968 | Msa0346790:CDS |
| AGGTAGAGGAATGACATTGT+GGG | 0.575168 | 3_1:+7515296 | Msa0346790:CDS |
| ATGCCAACAATTCTACGAGC+AGG | 0.576106 | 3_1:+7515276 | Msa0346790:CDS |
| AGTTATGCCGTAGAGAGTGT+TGG | 0.576277 | 3_1:-7510975 | None:intergenic |
| TTTGTTCGAAACCTATTCGT+CGG | 0.576535 | 3_1:+7516504 | Msa0346790:CDS |
| CTTACAGAACCTTTAGGACA+AGG | 0.591800 | 3_1:-7513936 | None:intergenic |
| TGAACTAGATCTTTCTGTCG+AGG | 0.600096 | 3_1:+7513493 | Msa0346790:CDS |
| AAAAGCTGCAAACTAATAGG+AGG | 0.603920 | 3_1:-7513085 | None:intergenic |
| CTGAGCATGAGTTGGTGCAG+TGG | 0.606372 | 3_1:-7510949 | None:intergenic |
| AGAAAGATCTAGTTCAGTCA+TGG | 0.609780 | 3_1:-7513486 | None:intergenic |
| GAACTTGAAGTGGATTGTTG+TGG | 0.611246 | 3_1:-7511091 | None:intergenic |
| ACAGAGAAAAGCTTGAGCAA+GGG | 0.611657 | 3_1:-7511145 | None:intergenic |
| GTTCTTTCAAATCACCACAA+AGG | 0.613186 | 3_1:+7516566 | Msa0346790:three_prime_UTR |
| TATGTGATGAACAAAATCAC+AGG | 0.614486 | 3_1:+7516608 | Msa0346790:three_prime_UTR |
| TGTTCGAGCGATATGGAGAA+GGG | 0.616808 | 3_1:+7515113 | Msa0346790:CDS |
| TTGCATTTGAGTTTAAGACT+TGG | 0.618819 | 3_1:-7511016 | None:intergenic |
| GCATGAGTTGGTGCAGTGGA+AGG | 0.619413 | 3_1:-7510945 | None:intergenic |
| AAACCTTGATGTGCTGGCCA+AGG | 0.622161 | 3_1:-7513005 | None:intergenic |
| GTTGGGAACTGAGCATGAGT+TGG | 0.626839 | 3_1:-7510957 | None:intergenic |
| CAGGTAGAGGAATGACATTG+TGG | 0.629598 | 3_1:+7515295 | Msa0346790:CDS |
| GAATGCTCGTATTGTGCGTG+AGG | 0.629611 | 3_1:+7515900 | Msa0346790:intron |
| AACAGCTCCAGCTTTCTAGG+AGG | 0.635879 | 3_1:-7515339 | None:intergenic |
| GCAGCACTATCTTCACTGGA+TGG | 0.651360 | 3_1:+7515253 | Msa0346790:intron |
| TTCTGTAAGACACAGAGAGG+TGG | 0.659198 | 3_1:+7513950 | Msa0346790:CDS |
| GTTCTCCTATGAAAATAACC+CGG | 0.677731 | 3_1:+7515359 | Msa0346790:CDS |
| AGCACATCAAGGTTTGCATG+GGG | 0.694844 | 3_1:+7513013 | Msa0346790:CDS |
| AGGTTCTGTAAGACACAGAG+AGG | 0.695163 | 3_1:+7513947 | Msa0346790:CDS |
| GAGGTGGTCAGAGAAACTGG+TGG | 0.779819 | 3_1:+7513966 | Msa0346790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAAATGTTAAATATATA+AGG | + | chr3_1:7511500-7511519 | Msa0346790:intron | 10.0% |
| !! | GTAAAATGTTAAATATATAA+GGG | + | chr3_1:7511501-7511520 | Msa0346790:intron | 10.0% |
| !!! | AAATGTTTTATAAAAACTAT+AGG | + | chr3_1:7512885-7512904 | Msa0346790:intron | 10.0% |
| !!! | TATATTTTCTCAAATTATTA+CGG | - | chr3_1:7513708-7513727 | None:intergenic | 10.0% |
| !!! | ACAAAATATTTTAAAAGATA+AGG | - | chr3_1:7514805-7514824 | None:intergenic | 10.0% |
| !! | ATTAGTTAAAATCATTAAAA+TGG | - | chr3_1:7515031-7515050 | None:intergenic | 10.0% |
| !!! | AATTTTGAATCTGTTAATAT+TGG | - | chr3_1:7511044-7511063 | None:intergenic | 15.0% |
| !!! | AACTACTAATTAGTTTAATT+TGG | - | chr3_1:7511215-7511234 | None:intergenic | 15.0% |
| !! | AATTTCTTAGATTGTTAAAA+GGG | - | chr3_1:7511427-7511446 | None:intergenic | 15.0% |
| !! | AAATTTCTTAGATTGTTAAA+AGG | - | chr3_1:7511428-7511447 | None:intergenic | 15.0% |
| !!! | CTAAGAAATTTTATTTTGTA+AGG | + | chr3_1:7511437-7511456 | Msa0346790:intron | 15.0% |
| !! | TGTTGTTGTATATTAAAATA+TGG | + | chr3_1:7512178-7512197 | Msa0346790:intron | 15.0% |
| !! | CTTTAATTAAAATCGTAAAA+GGG | - | chr3_1:7512268-7512287 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTAAATACTATTT+TGG | + | chr3_1:7512283-7512302 | Msa0346790:intron | 15.0% |
| !! | AAAAGAAATAAATTAACTTC+TGG | - | chr3_1:7513222-7513241 | None:intergenic | 15.0% |
| !! | ATAGTATGAAAGATTTAAAA+AGG | - | chr3_1:7513423-7513442 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+GGG | - | chr3_1:7513707-7513726 | None:intergenic | 15.0% |
| !! | TTTGAGAAAATATAAGTAAT+TGG | + | chr3_1:7513714-7513733 | Msa0346790:intron | 15.0% |
| !!! | CAATAAAATTCTTTTGAAAT+TGG | - | chr3_1:7513817-7513836 | None:intergenic | 15.0% |
| !! | AAATATAAGTAGAAAGAATA+AGG | - | chr3_1:7514938-7514957 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGAATGAAT+CGG | + | chr3_1:7515463-7515482 | Msa0346790:intron | 15.0% |
| !! | AATAATTGTTGAATAATACT+TGG | + | chr3_1:7516315-7516334 | Msa0346790:intron | 15.0% |
| !!! | TACTAATTAGTTTAATTTGG+TGG | - | chr3_1:7511212-7511231 | None:intergenic | 20.0% |
| !!! | TTCTCATCTAATGATTTTAT+TGG | + | chr3_1:7511350-7511369 | Msa0346790:intron | 20.0% |
| !! | CCTTTAATTAAAATCGTAAA+AGG | - | chr3_1:7512269-7512288 | None:intergenic | 20.0% |
| !!! | CCTTTTACGATTTTAATTAA+AGG | + | chr3_1:7512266-7512285 | Msa0346790:intron | 20.0% |
| !! | TAGTATTAAAATGTATAGCT+GGG | - | chr3_1:7512369-7512388 | None:intergenic | 20.0% |
| !! | TTAGTATTAAAATGTATAGC+TGG | - | chr3_1:7512370-7512389 | None:intergenic | 20.0% |
| !!! | AATACTAAATTTTGATGATG+TGG | + | chr3_1:7512382-7512401 | Msa0346790:intron | 20.0% |
| !! | AAGTCTTAATAACTAGTTAT+TGG | + | chr3_1:7512708-7512727 | Msa0346790:intron | 20.0% |
| !!! | TTTTTCTGAATATGAACTAT+TGG | + | chr3_1:7512791-7512810 | Msa0346790:intron | 20.0% |
| !!! | TATAGGAAGAATGAATTTTT+TGG | + | chr3_1:7512902-7512921 | Msa0346790:intron | 20.0% |
| !!! | GCAAATGTTTTAGAATATTT+TGG | - | chr3_1:7512928-7512947 | None:intergenic | 20.0% |
| !! | AAGAAGAATACAAAAAATGT+TGG | - | chr3_1:7513170-7513189 | None:intergenic | 20.0% |
| !!! | AAAAACAAAAGCTGTTTTTT+TGG | + | chr3_1:7514081-7514100 | Msa0346790:intron | 20.0% |
| !!! | AAAACAAAAGCTGTTTTTTT+GGG | + | chr3_1:7514082-7514101 | Msa0346790:intron | 20.0% |
| !! | AGAGATAAGAAAAAAGATAA+AGG | + | chr3_1:7514145-7514164 | Msa0346790:intron | 20.0% |
| !! | GAGATAAGAAAAAAGATAAA+GGG | + | chr3_1:7514146-7514165 | Msa0346790:intron | 20.0% |
| !! | TTCTTTCTACTTATATTTAG+TGG | + | chr3_1:7514940-7514959 | Msa0346790:intron | 20.0% |
| !! | AATGTGAAATGATTTATGAT+TGG | + | chr3_1:7515491-7515510 | Msa0346790:intron | 20.0% |
| !!! | TTAATTTCTCACTTTGTTTT+GGG | + | chr3_1:7515830-7515849 | Msa0346790:intron | 20.0% |
| !! | CAAATAAATTCTTACTTCTT+TGG | - | chr3_1:7516013-7516032 | None:intergenic | 20.0% |
| !! | TGGTTCAATTTCAATAAAAA+AGG | - | chr3_1:7516256-7516275 | None:intergenic | 20.0% |
| !!! | TTTAGTTCTTCTAAAATGAA+TGG | - | chr3_1:7516276-7516295 | None:intergenic | 20.0% |
| !! | CAACAATTATTAAACATAAC+TGG | - | chr3_1:7516306-7516325 | None:intergenic | 20.0% |
| !! | AAAGAACTGATTATTCAAAA+TGG | + | chr3_1:7516655-7516674 | Msa0346790:three_prime_UTR | 20.0% |
| !! | ATCTAATGATTTTATTGGCA+GGG | + | chr3_1:7511355-7511374 | Msa0346790:intron | 25.0% |
| !! | GAAATGTTTCTACAAATGAA+TGG | + | chr3_1:7511668-7511687 | Msa0346790:intron | 25.0% |
| ! | ATGAAGTATATGTTAAAACC+CGG | + | chr3_1:7511750-7511769 | Msa0346790:intron | 25.0% |
| ! | GAAGACATAGAAAAACTATT+TGG | + | chr3_1:7512047-7512066 | Msa0346790:intron | 25.0% |
| ! | TGTCTATCATAAACCATATT+TGG | - | chr3_1:7512100-7512119 | None:intergenic | 25.0% |
| ! | ATGGTTTATGATAGACATTA+TGG | + | chr3_1:7512103-7512122 | Msa0346790:intron | 25.0% |
| ! | AGAGAGGTTACAAAAAAATT+GGG | - | chr3_1:7512238-7512257 | None:intergenic | 25.0% |
| ! | AAGAGAGGTTACAAAAAAAT+TGG | - | chr3_1:7512239-7512258 | None:intergenic | 25.0% |
| !! | AGTCTATTTTGTATGGATTT+TGG | + | chr3_1:7512308-7512327 | Msa0346790:intron | 25.0% |
| ! | TAATGTATATCTCGATGAAA+TGG | - | chr3_1:7512487-7512506 | None:intergenic | 25.0% |
| ! | ATATCAATAGCACTACAAAA+GGG | - | chr3_1:7512770-7512789 | None:intergenic | 25.0% |
| ! | AATATCAATAGCACTACAAA+AGG | - | chr3_1:7512771-7512790 | None:intergenic | 25.0% |
| !! | GAGAATCTTAGTTTGAATAA+AGG | - | chr3_1:7513329-7513348 | None:intergenic | 25.0% |
| ! | GTTTCATACTTAATAGCATA+AGG | - | chr3_1:7513639-7513658 | None:intergenic | 25.0% |
| !! | AATGATTTATGGTTGACTTA+TGG | + | chr3_1:7513864-7513883 | Msa0346790:intron | 25.0% |
| ! | ACCAACAGTAGTAATATTAA+GGG | - | chr3_1:7513899-7513918 | None:intergenic | 25.0% |
| !!! | AAACAAAAGCTGTTTTTTTG+GGG | + | chr3_1:7514083-7514102 | Msa0346790:intron | 25.0% |
| !!! | TATCTTTTTTCTTATCTCTC+TGG | - | chr3_1:7514144-7514163 | None:intergenic | 25.0% |
| !!! | ATTCCATCACAAAGTATTTT+TGG | - | chr3_1:7514213-7514232 | None:intergenic | 25.0% |
| !! | AAAAATACTTTGTGATGGAA+TGG | + | chr3_1:7514212-7514231 | Msa0346790:intron | 25.0% |
| ! | TGGATTTAAATGGAATAGAA+CGG | + | chr3_1:7514237-7514256 | Msa0346790:intron | 25.0% |
| !! | CACGTTGAATTTTTATCATT+TGG | - | chr3_1:7514527-7514546 | None:intergenic | 25.0% |
| !!! | TAGTTAGAATGGCTATTTTT+GGG | - | chr3_1:7514607-7514626 | None:intergenic | 25.0% |
| !!! | TTAGTTAGAATGGCTATTTT+TGG | - | chr3_1:7514608-7514627 | None:intergenic | 25.0% |
| ! | ATTCTAACTAACTATTCTCA+GGG | + | chr3_1:7514617-7514636 | Msa0346790:intron | 25.0% |
| !! | ATTTTCAACATACTCATTCT+TGG | + | chr3_1:7514766-7514785 | Msa0346790:intron | 25.0% |
| ! | GTAAACAACTATGAAAATGA+AGG | - | chr3_1:7514981-7515000 | None:intergenic | 25.0% |
| ! | TTCATAGTTGTTTACTAGTT+CGG | + | chr3_1:7514986-7515005 | Msa0346790:intron | 25.0% |
| ! | ATTAAAATGGACCATTAAGA+AGG | - | chr3_1:7515018-7515037 | None:intergenic | 25.0% |
| !!! | TAGAGAGGTATACATATTTT+AGG | + | chr3_1:7515158-7515177 | Msa0346790:intron | 25.0% |
| !!! | AGAGAGGTATACATATTTTA+GGG | + | chr3_1:7515159-7515178 | Msa0346790:intron | 25.0% |
| ! | ATAGAAGAACATTATCTTAC+CGG | - | chr3_1:7515381-7515400 | None:intergenic | 25.0% |
| ! | TTGAGTGTAAAAATCACATT+TGG | + | chr3_1:7515542-7515561 | Msa0346790:intron | 25.0% |
| !!! | ATGCATTTGATTTGTAACAA+TGG | + | chr3_1:7515734-7515753 | Msa0346790:intron | 25.0% |
| !!! | TGCATTTGATTTGTAACAAT+GGG | + | chr3_1:7515735-7515754 | Msa0346790:intron | 25.0% |
| !!! | AAGATTTGCTATAATTGTCA+TGG | + | chr3_1:7515776-7515795 | Msa0346790:intron | 25.0% |
| !! | TTAAGATAGTTGATTCTACT+CGG | - | chr3_1:7515814-7515833 | None:intergenic | 25.0% |
| !!! | CTTAATTTCTCACTTTGTTT+TGG | + | chr3_1:7515829-7515848 | Msa0346790:intron | 25.0% |
| !!! | TAATTTCTCACTTTGTTTTG+GGG | + | chr3_1:7515831-7515850 | Msa0346790:intron | 25.0% |
| !!! | TTTTGCTTATTTTCCAAAGT+TGG | + | chr3_1:7516063-7516082 | Msa0346790:intron | 25.0% |
| !!! | AAATTCTGGTTTTTTTTTGC+CGG | + | chr3_1:7516086-7516105 | Msa0346790:intron | 25.0% |
| ! | CATGATTTATAAGAGAATGA+AGG | - | chr3_1:7516218-7516237 | None:intergenic | 25.0% |
| ! | AAAATTTCGTTTGAAGAAAG+TGG | - | chr3_1:7516544-7516563 | None:intergenic | 25.0% |
| ! | TTGAGTTTAAGACTTGGAAT+TGG | - | chr3_1:7511013-7511032 | None:intergenic | 30.0% |
| ! | TTGCATTTGAGTTTAAGACT+TGG | - | chr3_1:7511019-7511038 | None:intergenic | 30.0% |
| ! | CATCTAATGATTTTATTGGC+AGG | + | chr3_1:7511354-7511373 | Msa0346790:intron | 30.0% |
| ! | TAGACAACGTAATTTTGCTT+TGG | + | chr3_1:7511390-7511409 | Msa0346790:CDS | 30.0% |
| ! | ACATAATGCCTTAAGGTTTT+AGG | + | chr3_1:7511536-7511555 | Msa0346790:intron | 30.0% |
| AGATGGTAGAAAATAGTCTT+AGG | + | chr3_1:7511936-7511955 | Msa0346790:intron | 30.0% | |
| TTGTAGTAAAGAGAGTAGAT+CGG | + | chr3_1:7511993-7512012 | Msa0346790:intron | 30.0% | |
| TAATGAGTTCGATCCAAATA+TGG | + | chr3_1:7512084-7512103 | Msa0346790:intron | 30.0% | |
| ! | AAGCTTTATCCTACTAAGTT+GGG | - | chr3_1:7512152-7512171 | None:intergenic | 30.0% |
| !!! | TTTGGAAGGGTTTTTTAAGA+GGG | - | chr3_1:7512210-7512229 | None:intergenic | 30.0% |
| GAGAGGTTACAAAAAAATTG+GGG | - | chr3_1:7512237-7512256 | None:intergenic | 30.0% | |
| ! | TTTGGTCAGTCTATTTTGTA+TGG | + | chr3_1:7512301-7512320 | Msa0346790:intron | 30.0% |
| ! | TTTTCTCCAACTATGCATTT+AGG | - | chr3_1:7512616-7512635 | None:intergenic | 30.0% |
| AAAGAACAAAATCGTGAATG+AGG | + | chr3_1:7512657-7512676 | Msa0346790:intron | 30.0% | |
| AAGAACAAAATCGTGAATGA+GGG | + | chr3_1:7512658-7512677 | Msa0346790:intron | 30.0% | |
| AGTAGTACATGTGTTGTAAA+CGG | + | chr3_1:7512859-7512878 | Msa0346790:intron | 30.0% | |
| TCAAAAAGCTGCAAACTAAT+AGG | - | chr3_1:7513091-7513110 | None:intergenic | 30.0% | |
| ! | AGTTTGCAGCTTTTTGAATT+TGG | + | chr3_1:7513094-7513113 | Msa0346790:CDS | 30.0% |
| TTCATACTATTTGTCAACAG+AGG | + | chr3_1:7513433-7513452 | Msa0346790:intron | 30.0% | |
| TAAATCATTTCTCAAGTCAC+AGG | - | chr3_1:7513853-7513872 | None:intergenic | 30.0% | |
| GTGACTTGAGAAATGATTTA+TGG | + | chr3_1:7513853-7513872 | Msa0346790:intron | 30.0% | |
| TCCCTTAATATTACTACTGT+TGG | + | chr3_1:7513895-7513914 | Msa0346790:intron | 30.0% | |
| CACCAACAGTAGTAATATTA+AGG | - | chr3_1:7513900-7513919 | None:intergenic | 30.0% | |
| !! | CTACTGTTGGTGTTATTAAT+AGG | + | chr3_1:7513908-7513927 | Msa0346790:intron | 30.0% |
| !!! | AACAAAAGCTGTTTTTTTGG+GGG | + | chr3_1:7514084-7514103 | Msa0346790:intron | 30.0% |
| CTTCCAAAAATACTTTGTGA+TGG | + | chr3_1:7514207-7514226 | Msa0346790:intron | 30.0% | |
| TATCAGCTCAACTATAGAAA+GGG | - | chr3_1:7514496-7514515 | None:intergenic | 30.0% | |
| TAGAGAACGAGTTTAATAAG+GGG | - | chr3_1:7514568-7514587 | None:intergenic | 30.0% | |
| GTAGAGAACGAGTTTAATAA+GGG | - | chr3_1:7514569-7514588 | None:intergenic | 30.0% | |
| CTGAGAATAGTTAGTTAGAA+TGG | - | chr3_1:7514618-7514637 | None:intergenic | 30.0% | |
| CATTCTAACTAACTATTCTC+AGG | + | chr3_1:7514616-7514635 | Msa0346790:intron | 30.0% | |
| ! | CTATTGAAGTTGTTATTCCA+GGG | - | chr3_1:7514703-7514722 | None:intergenic | 30.0% |
| ! | CATAATGTTGTCCTTTTTGT+AGG | + | chr3_1:7514840-7514859 | Msa0346790:intron | 30.0% |
| !!! | CTATTTTGATCAATGAGGAA+AGG | - | chr3_1:7514869-7514888 | None:intergenic | 30.0% |
| TTCCTCATTGATCAAAATAG+TGG | + | chr3_1:7514869-7514888 | Msa0346790:CDS | 30.0% | |
| TTACTTACTGCTTTCATACA+TGG | - | chr3_1:7514900-7514919 | None:intergenic | 30.0% | |
| ATGAAAGCAGTAAGTAAGAA+AGG | + | chr3_1:7514903-7514922 | Msa0346790:intron | 30.0% | |
| ATGAAAATGAAGGTGGTTTA+TGG | - | chr3_1:7514971-7514990 | None:intergenic | 30.0% | |
| AACAACTATGAAAATGAAGG+TGG | - | chr3_1:7514978-7514997 | None:intergenic | 30.0% | |
| ! | AGAAAGTACACAACATTCAA+TGG | - | chr3_1:7515059-7515078 | None:intergenic | 30.0% |
| TTGAATGTTGTGTACTTTCT+TGG | + | chr3_1:7515059-7515078 | Msa0346790:intron | 30.0% | |
| TAGAAGAACATTATCTTACC+GGG | - | chr3_1:7515380-7515399 | None:intergenic | 30.0% | |
| GTTCTTCTATCTCCAATTTA+TGG | + | chr3_1:7515391-7515410 | Msa0346790:intron | 30.0% | |
| TTTGCATTTCCTCCATAAAT+TGG | - | chr3_1:7515406-7515425 | None:intergenic | 30.0% | |
| !!! | CTTTGTCTGTTTGGTTTTTT+TGG | + | chr3_1:7515437-7515456 | Msa0346790:intron | 30.0% |
| TATGTGTCTCAAATCACTTT+CGG | + | chr3_1:7515593-7515612 | Msa0346790:intron | 30.0% | |
| !! | GCATTTGATTTGTAACAATG+GGG | + | chr3_1:7515736-7515755 | Msa0346790:intron | 30.0% |
| ! | TAACAATGGGGTTAGTATTT+AGG | + | chr3_1:7515748-7515767 | Msa0346790:intron | 30.0% |
| ! | TAAGATAGTTGATTCTACTC+GGG | - | chr3_1:7515813-7515832 | None:intergenic | 30.0% |
| !! | CCTACATTTTGAAGAATGTA+AGG | - | chr3_1:7515946-7515965 | None:intergenic | 30.0% |
| CCTTACATTCTTCAAAATGT+AGG | + | chr3_1:7515943-7515962 | Msa0346790:CDS | 30.0% | |
| ATTCTTCAAAATGTAGGAGA+AGG | + | chr3_1:7515949-7515968 | Msa0346790:CDS | 30.0% | |
| ! | TTTTCCAAAGTTGGAAATTC+TGG | + | chr3_1:7516072-7516091 | Msa0346790:intron | 30.0% |
| AAAACCAGAATTTCCAACTT+TGG | - | chr3_1:7516079-7516098 | None:intergenic | 30.0% | |
| TTATAAGAGAATGAAGGAAG+TGG | - | chr3_1:7516212-7516231 | None:intergenic | 30.0% | |
| ! | AGCGTTTTTCTGATATTTCT+TGG | + | chr3_1:7516358-7516377 | Msa0346790:intron | 30.0% |
| TCCTTACATGAATATGAAAG+TGG | + | chr3_1:7516406-7516425 | Msa0346790:intron | 30.0% | |
| ACCACTTTCATATTCATGTA+AGG | - | chr3_1:7516410-7516429 | None:intergenic | 30.0% | |
| GAATAGGTTTCGAACAAATA+AGG | - | chr3_1:7516502-7516521 | None:intergenic | 30.0% | |
| CTATAAATTATCCGACGAAT+AGG | - | chr3_1:7516518-7516537 | None:intergenic | 30.0% | |
| ACAACTTTAAATAGCCTTTG+TGG | - | chr3_1:7516583-7516602 | None:intergenic | 30.0% | |
| TATGTGATGAACAAAATCAC+AGG | + | chr3_1:7516608-7516627 | Msa0346790:three_prime_UTR | 30.0% | |
| TTTGGTGGAATTTGCATTTC+AGG | - | chr3_1:7511197-7511216 | None:intergenic | 35.0% | |
| ! | TAATGATTTTATTGGCAGGG+AGG | + | chr3_1:7511358-7511377 | Msa0346790:intron | 35.0% |
| GCAAAATTACGTTGTCTAGA+AGG | - | chr3_1:7511388-7511407 | None:intergenic | 35.0% | |
| ! | ACAACGTAATTTTGCTTTGG+AGG | + | chr3_1:7511393-7511412 | Msa0346790:CDS | 35.0% |
| CTCGTATACATAATGCCTTA+AGG | + | chr3_1:7511529-7511548 | Msa0346790:intron | 35.0% | |
| !!! | AATGCCTTAAGGTTTTAGGT+CGG | + | chr3_1:7511540-7511559 | Msa0346790:intron | 35.0% |
| TGTTGTATGGAACAAAGTGT+TGG | + | chr3_1:7511776-7511795 | Msa0346790:intron | 35.0% | |
| CGCTTACTTTATTCTTGTGT+TGG | - | chr3_1:7511813-7511832 | None:intergenic | 35.0% | |
| CAAGAATAAAGTAAGCGTAG+CGG | + | chr3_1:7511816-7511835 | Msa0346790:intron | 35.0% | |
| ATGATGACATTAGAGAGAGT+TGG | + | chr3_1:7511893-7511912 | Msa0346790:intron | 35.0% | |
| ! | AGCAACTATAGTGGAAAAGA+TGG | + | chr3_1:7511919-7511938 | Msa0346790:intron | 35.0% |
| ! | TGGTAGAAAATAGTCTTAGG+TGG | + | chr3_1:7511939-7511958 | Msa0346790:intron | 35.0% |
| ! | GAAAATAGTCTTAGGTGGTT+TGG | + | chr3_1:7511944-7511963 | Msa0346790:intron | 35.0% |
| CTCTTTACTACAAAATCTGC+AGG | - | chr3_1:7511986-7512005 | None:intergenic | 35.0% | |
| ! | TTTATCCTACTAAGTTGGGT+TGG | - | chr3_1:7512148-7512167 | None:intergenic | 35.0% |
| ! | CAAGCTTTATCCTACTAAGT+TGG | - | chr3_1:7512153-7512172 | None:intergenic | 35.0% |
| CAACTTAGTAGGATAAAGCT+TGG | + | chr3_1:7512151-7512170 | Msa0346790:intron | 35.0% | |
| !!! | GTTTGGAAGGGTTTTTTAAG+AGG | - | chr3_1:7512211-7512230 | None:intergenic | 35.0% |
| GGTTACAAAAAAATTGGGGT+CGG | - | chr3_1:7512233-7512252 | None:intergenic | 35.0% | |
| !!! | TTGTATGGATTTTGGTTCCT+TGG | + | chr3_1:7512316-7512335 | Msa0346790:intron | 35.0% |
| !!! | TGTATGGATTTTGGTTCCTT+GGG | + | chr3_1:7512317-7512336 | Msa0346790:intron | 35.0% |
| !! | TTGATGATGTGACATTGTCT+AGG | + | chr3_1:7512436-7512455 | Msa0346790:intron | 35.0% |
| AAGAGGTTTAGTCAGTTACA+CGG | - | chr3_1:7512956-7512975 | None:intergenic | 35.0% | |
| GCTATCATCAAAACTCAAAG+AGG | - | chr3_1:7512973-7512992 | None:intergenic | 35.0% | |
| ! | ATTGAAAGTGCATCGAGTAA+AGG | + | chr3_1:7513049-7513068 | Msa0346790:CDS | 35.0% |
| ! | TTGAAAGTGCATCGAGTAAA+GGG | + | chr3_1:7513050-7513069 | Msa0346790:CDS | 35.0% |
| AAAAGCTGCAAACTAATAGG+AGG | - | chr3_1:7513088-7513107 | None:intergenic | 35.0% | |
| TATTAGCAATAGCATCACCA+AGG | - | chr3_1:7513142-7513161 | None:intergenic | 35.0% | |
| GTGATGCTATTGCTAATAAC+AGG | + | chr3_1:7513144-7513163 | Msa0346790:intron | 35.0% | |
| !!! | TCTTTTTTAGTGCAAGCATC+AGG | + | chr3_1:7513236-7513255 | Msa0346790:intron | 35.0% |
| ! | AGAAAGATCTAGTTCAGTCA+TGG | - | chr3_1:7513489-7513508 | None:intergenic | 35.0% |
| TTGTGTATACGATGAATCTG+CGG | - | chr3_1:7513523-7513542 | None:intergenic | 35.0% | |
| ATGAAACACTGACAAAGACA+TGG | + | chr3_1:7513652-7513671 | Msa0346790:intron | 35.0% | |
| !! | ATTGAAGGTGTTTCAAGTGT+CGG | - | chr3_1:7513773-7513792 | None:intergenic | 35.0% |
| TAGGTTTATCCTTGTCCTAA+AGG | + | chr3_1:7513927-7513946 | Msa0346790:intron | 35.0% | |
| !!! | TTTTTTTGGGGGTATCTGTT+AGG | + | chr3_1:7514095-7514114 | Msa0346790:intron | 35.0% |
| ! | TGGAATGGAGTGGATTTAAA+TGG | + | chr3_1:7514227-7514246 | Msa0346790:intron | 35.0% |
| ! | TGCAAAATGGCATTTTATGG+TGG | + | chr3_1:7514343-7514362 | Msa0346790:intron | 35.0% |
| ! | GCAAAATGGCATTTTATGGT+GGG | + | chr3_1:7514344-7514363 | Msa0346790:intron | 35.0% |
| GTATCAGCTCAACTATAGAA+AGG | - | chr3_1:7514497-7514516 | None:intergenic | 35.0% | |
| GGTAGAGAACGAGTTTAATA+AGG | - | chr3_1:7514570-7514589 | None:intergenic | 35.0% | |
| !! | TTTTGGGTGGTTAGTGTTAA+AGG | - | chr3_1:7514591-7514610 | None:intergenic | 35.0% |
| !!! | TTAGAATGGCTATTTTTGGG+TGG | - | chr3_1:7514604-7514623 | None:intergenic | 35.0% |
| !! | TTTTATATGCTGATTGACCC+TGG | + | chr3_1:7514683-7514702 | Msa0346790:intron | 35.0% |
| ! | CCTATTGAAGTTGTTATTCC+AGG | - | chr3_1:7514704-7514723 | None:intergenic | 35.0% |
| CCTGGAATAACAACTTCAAT+AGG | + | chr3_1:7514701-7514720 | Msa0346790:intron | 35.0% | |
| AGGAAAGGAAACCTACAAAA+AGG | - | chr3_1:7514854-7514873 | None:intergenic | 35.0% | |
| !!! | CACCACTATTTTGATCAATG+AGG | - | chr3_1:7514874-7514893 | None:intergenic | 35.0% |
| !! | TTCGGATTAGTCCTTCTTAA+TGG | + | chr3_1:7515004-7515023 | Msa0346790:intron | 35.0% |
| ! | CTTTCTTGGTTTCTTGTTGT+AGG | + | chr3_1:7515073-7515092 | Msa0346790:intron | 35.0% |
| AAATACTTGTTCGAGCGATA+TGG | + | chr3_1:7515106-7515125 | Msa0346790:CDS | 35.0% | |
| !! | GAGGTATACATATTTTAGGG+AGG | + | chr3_1:7515162-7515181 | Msa0346790:intron | 35.0% |
| GTTCTCCTATGAAAATAACC+CGG | + | chr3_1:7515359-7515378 | Msa0346790:CDS | 35.0% | |
| !! | TCTTACCGGGTTATTTTCAT+AGG | - | chr3_1:7515367-7515386 | None:intergenic | 35.0% |
| CTTCTATCTCCAATTTATGG+AGG | + | chr3_1:7515394-7515413 | Msa0346790:intron | 35.0% | |
| AAGGAATGATAAAGAACCCA+AGG | - | chr3_1:7515665-7515684 | None:intergenic | 35.0% | |
| TCGATCAAGGTTCAATTGAA+AGG | - | chr3_1:7515684-7515703 | None:intergenic | 35.0% | |
| TGAATGTGTTCTTTCGATCA+AGG | - | chr3_1:7515697-7515716 | None:intergenic | 35.0% | |
| GTACAAATGTAGTGATATGC+CGG | - | chr3_1:7516108-7516127 | None:intergenic | 35.0% | |
| AGAAAAACGCTAGCAAGATA+CGG | - | chr3_1:7516349-7516368 | None:intergenic | 35.0% | |
| GTGTTGTGATCAACAAAGTA+AGG | - | chr3_1:7516445-7516464 | None:intergenic | 35.0% | |
| TACTTTGTTGATCACAACAC+TGG | + | chr3_1:7516445-7516464 | Msa0346790:CDS | 35.0% | |
| TTTGTTCGAAACCTATTCGT+CGG | + | chr3_1:7516504-7516523 | Msa0346790:CDS | 35.0% | |
| GTTCTTTCAAATCACCACAA+AGG | + | chr3_1:7516566-7516585 | Msa0346790:three_prime_UTR | 35.0% | |
| AGACTTGGAATTGGTATGCT+GGG | - | chr3_1:7511004-7511023 | None:intergenic | 40.0% | |
| AAGACTTGGAATTGGTATGC+TGG | - | chr3_1:7511005-7511024 | None:intergenic | 40.0% | |
| !! | GAACTTGAAGTGGATTGTTG+TGG | - | chr3_1:7511094-7511113 | None:intergenic | 40.0% |
| ACAGAGAAAAGCTTGAGCAA+GGG | - | chr3_1:7511148-7511167 | None:intergenic | 40.0% | |
| TACAGAGAAAAGCTTGAGCA+AGG | - | chr3_1:7511149-7511168 | None:intergenic | 40.0% | |
| TTGTAAGGCTCTCTTTGCTT+TGG | + | chr3_1:7511452-7511471 | Msa0346790:intron | 40.0% | |
| CATTCCGACCTAAAACCTTA+AGG | - | chr3_1:7511547-7511566 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTAGGTCGGAATG+TGG | + | chr3_1:7511547-7511566 | Msa0346790:intron | 40.0% |
| TTTGTTCCATACAACATCGC+CGG | - | chr3_1:7511772-7511791 | None:intergenic | 40.0% | |
| !! | GTATGGAACAAAGTGTTGGA+CGG | + | chr3_1:7511780-7511799 | Msa0346790:intron | 40.0% |
| CGGAGATTAGGATGTTATGT+TGG | + | chr3_1:7511836-7511855 | Msa0346790:intron | 40.0% | |
| AGGATGTTATGTTGGATGTG+TGG | + | chr3_1:7511844-7511863 | Msa0346790:intron | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | + | chr3_1:7511863-7511882 | Msa0346790:intron | 40.0% | |
| AGTTGGAGTAGCAACTATAG+TGG | + | chr3_1:7511910-7511929 | Msa0346790:intron | 40.0% | |
| AGTAAAGAGAGTAGATCGGA+TGG | + | chr3_1:7511997-7512016 | Msa0346790:intron | 40.0% | |
| GAGGATAGTCAGATTACAAG+AGG | + | chr3_1:7512019-7512038 | Msa0346790:intron | 40.0% | |
| AGTCAGATTACAAGAGGTAG+AGG | + | chr3_1:7512025-7512044 | Msa0346790:intron | 40.0% | |
| CAAAAAAATTGGGGTCGGTT+TGG | - | chr3_1:7512228-7512247 | None:intergenic | 40.0% | |
| GTAAAAGGGCAAAACAAGAG+AGG | - | chr3_1:7512254-7512273 | None:intergenic | 40.0% | |
| AAGACACTCTCTAGTTGCAT+AGG | + | chr3_1:7512539-7512558 | Msa0346790:intron | 40.0% | |
| !!! | AGGACTGGTTTTCTATGATG+TGG | - | chr3_1:7512596-7512615 | None:intergenic | 40.0% |
| ACCAGTCCTAAATGCATAGT+TGG | + | chr3_1:7512607-7512626 | Msa0346790:intron | 40.0% | |
| ! | TCCAACTATGCATTTAGGAC+TGG | - | chr3_1:7512611-7512630 | None:intergenic | 40.0% |
| ! | TTTTGCTACCGAAGAATCCT+TGG | + | chr3_1:7513122-7513141 | Msa0346790:intron | 40.0% |
| TAGCATCACCAAGGATTCTT+CGG | - | chr3_1:7513133-7513152 | None:intergenic | 40.0% | |
| TGAACTAGATCTTTCTGTCG+AGG | + | chr3_1:7513493-7513512 | Msa0346790:CDS | 40.0% | |
| ! | ACACCTTCAATCTGAAGTGT+TGG | + | chr3_1:7513782-7513801 | Msa0346790:intron | 40.0% |
| !! | CTTACAGAACCTTTAGGACA+AGG | - | chr3_1:7513939-7513958 | None:intergenic | 40.0% |
| CTGTGTCTTACAGAACCTTT+AGG | - | chr3_1:7513945-7513964 | None:intergenic | 40.0% | |
| ! | TACTTTGTGATGGAATGGAG+TGG | + | chr3_1:7514217-7514236 | Msa0346790:intron | 40.0% |
| ACGGAGTTATCACTCTATGA+TGG | + | chr3_1:7514256-7514275 | Msa0346790:intron | 40.0% | |
| ! | GGATTTTATGACAACTTCCC+TGG | + | chr3_1:7514301-7514320 | Msa0346790:intron | 40.0% |
| CAACATTCACAAATTGGCCA+GGG | - | chr3_1:7514321-7514340 | None:intergenic | 40.0% | |
| TGCAGCCAACATTCACAAAT+TGG | - | chr3_1:7514327-7514346 | None:intergenic | 40.0% | |
| ! | TGTGAATGTTGGCTGCAAAA+TGG | + | chr3_1:7514330-7514349 | Msa0346790:intron | 40.0% |
| ! | GGCTGCAAAATGGCATTTTA+TGG | + | chr3_1:7514340-7514359 | Msa0346790:intron | 40.0% |
| !!! | TGGCATTTTATGGTGGGTTT+TGG | + | chr3_1:7514350-7514369 | Msa0346790:intron | 40.0% |
| ! | CTAGTGTTATCGATTGCGAA+TGG | - | chr3_1:7514383-7514402 | None:intergenic | 40.0% |
| AAATCAGCGTGTCAATTGCA+GGG | - | chr3_1:7514418-7514437 | None:intergenic | 40.0% | |
| !! | TATGTTTGGATTGGCGGTAA+GGG | - | chr3_1:7514467-7514486 | None:intergenic | 40.0% |
| !! | TTATGTTTGGATTGGCGGTA+AGG | - | chr3_1:7514468-7514487 | None:intergenic | 40.0% |
| ! | CTCAGTTATGTTTGGATTGG+CGG | - | chr3_1:7514473-7514492 | None:intergenic | 40.0% |
| AGAAAGGGCTCAGTTATGTT+TGG | - | chr3_1:7514481-7514500 | None:intergenic | 40.0% | |
| ACGAGTTTAATAAGGGGAGA+GGG | - | chr3_1:7514562-7514581 | None:intergenic | 40.0% | |
| AACGAGTTTAATAAGGGGAG+AGG | - | chr3_1:7514563-7514582 | None:intergenic | 40.0% | |
| ! | CTCTCTAAAAGTCCCAATGA+TGG | - | chr3_1:7515145-7515164 | None:intergenic | 40.0% |
| !! | CATCATTGGGACTTTTAGAG+AGG | + | chr3_1:7515143-7515162 | Msa0346790:CDS | 40.0% |
| CGCAAGAGTGAGTTATTATG+AGG | - | chr3_1:7515234-7515253 | None:intergenic | 40.0% | |
| AGGTAGAGGAATGACATTGT+GGG | + | chr3_1:7515296-7515315 | Msa0346790:CDS | 40.0% | |
| GAGGAAATGCAAACATGTAG+AGG | + | chr3_1:7515413-7515432 | Msa0346790:intron | 40.0% | |
| TGTAGAGGACTTTGTCTGTT+TGG | + | chr3_1:7515428-7515447 | Msa0346790:intron | 40.0% | |
| ! | AAAGTGTGCGTTTGGTTTCA+CGG | - | chr3_1:7515628-7515647 | None:intergenic | 40.0% |
| ACATAGACAAAGTGTGCGTT+TGG | - | chr3_1:7515636-7515655 | None:intergenic | 40.0% | |
| TTTGTCTATGTGCTCAACCT+TGG | + | chr3_1:7515645-7515664 | Msa0346790:intron | 40.0% | |
| TTGTCTATGTGCTCAACCTT+GGG | + | chr3_1:7515646-7515665 | Msa0346790:intron | 40.0% | |
| AAGTTACTCTTGGATGCTTC+TGG | + | chr3_1:7515985-7516004 | Msa0346790:CDS | 40.0% | |
| CACTACATTTGTACCGTACT+AGG | + | chr3_1:7516114-7516133 | Msa0346790:intron | 40.0% | |
| AGCCAAATCATCCTTGAGAA+GGG | - | chr3_1:7516142-7516161 | None:intergenic | 40.0% | |
| AAGCCAAATCATCCTTGAGA+AGG | - | chr3_1:7516143-7516162 | None:intergenic | 40.0% | |
| ! | GAAGGAAGTGGATTTCAACA+AGG | - | chr3_1:7516200-7516219 | None:intergenic | 40.0% |
| ATATGAAAGTGGTTCTCTGC+AGG | + | chr3_1:7516417-7516436 | Msa0346790:intron | 40.0% | |
| CACAACACTGGATTTCAATC+TGG | + | chr3_1:7516457-7516476 | Msa0346790:CDS | 40.0% | |
| TCAGTTCCCAACACTCTCTA+CGG | + | chr3_1:7510968-7510987 | Msa0346790:CDS | 45.0% | |
| !! | GTTATGCCGTAGAGAGTGTT+GGG | - | chr3_1:7510977-7510996 | None:intergenic | 45.0% |
| ! | AGTTATGCCGTAGAGAGTGT+TGG | - | chr3_1:7510978-7510997 | None:intergenic | 45.0% |
| GGAAGGAGTTGAACTTGAAG+TGG | - | chr3_1:7511104-7511123 | None:intergenic | 45.0% | |
| AGAAAGGAGAGAAAGGAGGA+AGG | - | chr3_1:7511121-7511140 | None:intergenic | 45.0% | |
| ACAGAGAAAGGAGAGAAAGG+AGG | - | chr3_1:7511125-7511144 | None:intergenic | 45.0% | |
| TAAAAACAGGCCAATGCTCC+TGG | - | chr3_1:7511582-7511601 | None:intergenic | 45.0% | |
| AAACCTGCTCCCAAACTGTT+GGG | - | chr3_1:7511626-7511645 | None:intergenic | 45.0% | |
| TAAACCTGCTCCCAAACTGT+TGG | - | chr3_1:7511627-7511646 | None:intergenic | 45.0% | |
| AGTTTGGGAGCAGGTTTAAG+AGG | + | chr3_1:7511629-7511648 | Msa0346790:intron | 45.0% | |
| GTTTGGGAGCAGGTTTAAGA+GGG | + | chr3_1:7511630-7511649 | Msa0346790:intron | 45.0% | |
| TTTGGGAGCAGGTTTAAGAG+GGG | + | chr3_1:7511631-7511650 | Msa0346790:intron | 45.0% | |
| TAAAACCCGGCGATGTTGTA+TGG | + | chr3_1:7511763-7511782 | Msa0346790:intron | 45.0% | |
| TTGTTCCATACAACATCGCC+GGG | - | chr3_1:7511771-7511790 | None:intergenic | 45.0% | |
| ! | AAGTAAGCGTAGCGGAGATT+AGG | + | chr3_1:7511824-7511843 | Msa0346790:intron | 45.0% |
| !! | TCTTAGGTGGTTTGGTCATG+TGG | + | chr3_1:7511952-7511971 | Msa0346790:intron | 45.0% |
| AAAGAGAGTAGATCGGATGG+AGG | + | chr3_1:7512000-7512019 | Msa0346790:intron | 45.0% | |
| TGTAGCCAACCCAACTTAGT+AGG | + | chr3_1:7512140-7512159 | Msa0346790:intron | 45.0% | |
| !! | AAATTGGGGTCGGTTTGGAA+GGG | - | chr3_1:7512223-7512242 | None:intergenic | 45.0% |
| !! | AAAATTGGGGTCGGTTTGGA+AGG | - | chr3_1:7512224-7512243 | None:intergenic | 45.0% |
| ACACTCTCTAGTTGCATAGG+TGG | + | chr3_1:7512542-7512561 | Msa0346790:intron | 45.0% | |
| ATAGCACTACAAAAGGGCTC+TGG | - | chr3_1:7512764-7512783 | None:intergenic | 45.0% | |
| ATAGCTAGCGACATCTTCCT+TGG | + | chr3_1:7512988-7513007 | Msa0346790:intron | 45.0% | |
| CAGCACATCAAGGTTTGCAT+GGG | + | chr3_1:7513012-7513031 | Msa0346790:CDS | 45.0% | |
| AGCACATCAAGGTTTGCATG+GGG | + | chr3_1:7513013-7513032 | Msa0346790:CDS | 45.0% | |
| TTTAGTGCAAGCATCAGGCT+TGG | + | chr3_1:7513241-7513260 | Msa0346790:intron | 45.0% | |
| ! | AGGCATGCCCTTTTTGTAGA+AGG | + | chr3_1:7513453-7513472 | Msa0346790:CDS | 45.0% |
| ! | GGCATGCCCTTTTTGTAGAA+GGG | + | chr3_1:7513454-7513473 | Msa0346790:CDS | 45.0% |
| ! | GCCCTTTTTGTAGAAGGGTA+CGG | + | chr3_1:7513459-7513478 | Msa0346790:CDS | 45.0% |
| CCCGTACCCTTCTACAAAAA+GGG | - | chr3_1:7513463-7513482 | None:intergenic | 45.0% | |
| !! | CCCTTTTTGTAGAAGGGTAC+GGG | + | chr3_1:7513460-7513479 | Msa0346790:CDS | 45.0% |
| TCCCGTACCCTTCTACAAAA+AGG | - | chr3_1:7513464-7513483 | None:intergenic | 45.0% | |
| !! | TTTTTGTAGAAGGGTACGGG+AGG | + | chr3_1:7513463-7513482 | Msa0346790:CDS | 45.0% |
| GCACCAACACTTCAGATTGA+AGG | - | chr3_1:7513788-7513807 | None:intergenic | 45.0% | |
| AGGTTCTGTAAGACACAGAG+AGG | + | chr3_1:7513947-7513966 | Msa0346790:CDS | 45.0% | |
| TTCTGTAAGACACAGAGAGG+TGG | + | chr3_1:7513950-7513969 | Msa0346790:CDS | 45.0% | |
| ! | ATCACTCTATGATGGTGCCA+TGG | + | chr3_1:7514264-7514283 | Msa0346790:intron | 45.0% |
| CCAACATTCACAAATTGGCC+AGG | - | chr3_1:7514322-7514341 | None:intergenic | 45.0% | |
| CCTGGCCAATTTGTGAATGT+TGG | + | chr3_1:7514319-7514338 | Msa0346790:intron | 45.0% | |
| ! | GTGTTATCGATTGCGAATGG+AGG | - | chr3_1:7514380-7514399 | None:intergenic | 45.0% |
| GAAATCAGCGTGTCAATTGC+AGG | - | chr3_1:7514419-7514438 | None:intergenic | 45.0% | |
| AGGGATGGAATGATGTGGAA+GGG | - | chr3_1:7514448-7514467 | None:intergenic | 45.0% | |
| AAGGGATGGAATGATGTGGA+AGG | - | chr3_1:7514449-7514468 | None:intergenic | 45.0% | |
| GGGCTCAGTTATGTTTGGAT+TGG | - | chr3_1:7514476-7514495 | None:intergenic | 45.0% | |
| TTGTTCGAGCGATATGGAGA+AGG | + | chr3_1:7515112-7515131 | Msa0346790:CDS | 45.0% | |
| TGTTCGAGCGATATGGAGAA+GGG | + | chr3_1:7515113-7515132 | Msa0346790:CDS | 45.0% | |
| AGAAGGGAGAAGTCCATCAT+TGG | + | chr3_1:7515129-7515148 | Msa0346790:CDS | 45.0% | |
| GAAGGGAGAAGTCCATCATT+GGG | + | chr3_1:7515130-7515149 | Msa0346790:CDS | 45.0% | |
| ATGCCAACAATTCTACGAGC+AGG | + | chr3_1:7515276-7515295 | Msa0346790:CDS | 45.0% | |
| CTACCTGCTCGTAGAATTGT+TGG | - | chr3_1:7515282-7515301 | None:intergenic | 45.0% | |
| ACAATTCTACGAGCAGGTAG+AGG | + | chr3_1:7515282-7515301 | Msa0346790:CDS | 45.0% | |
| CAGGTAGAGGAATGACATTG+TGG | + | chr3_1:7515295-7515314 | Msa0346790:CDS | 45.0% | |
| TGACATTGTGGGAACGTTCT+AGG | + | chr3_1:7515307-7515326 | Msa0346790:CDS | 45.0% | |
| GACATTGTGGGAACGTTCTA+GGG | + | chr3_1:7515308-7515327 | Msa0346790:CDS | 45.0% | |
| ! | AGTTGATTCTACTCGGGCAT+GGG | - | chr3_1:7515807-7515826 | None:intergenic | 45.0% |
| ! | TAGTTGATTCTACTCGGGCA+TGG | - | chr3_1:7515808-7515827 | None:intergenic | 45.0% |
| ACGACGAACGAAGTTACTCT+TGG | + | chr3_1:7515975-7515994 | Msa0346790:CDS | 45.0% | |
| CACCCTTCTCAAGGATGATT+TGG | + | chr3_1:7516137-7516156 | Msa0346790:intron | 45.0% | |
| GTTGGGAACTGAGCATGAGT+TGG | - | chr3_1:7510960-7510979 | None:intergenic | 50.0% | |
| GGGACAGAGAAAGGAGAGAA+AGG | - | chr3_1:7511128-7511147 | None:intergenic | 50.0% | |
| CTTGAGCAAGGGACAGAGAA+AGG | - | chr3_1:7511137-7511156 | None:intergenic | 50.0% | |
| TGCGGATTCCCCAACAGTTT+GGG | + | chr3_1:7511614-7511633 | Msa0346790:intron | 50.0% | |
| AACCTGCTCCCAAACTGTTG+GGG | - | chr3_1:7511625-7511644 | None:intergenic | 50.0% | |
| TTGGGAGCAGGTTTAAGAGG+GGG | + | chr3_1:7511632-7511651 | Msa0346790:intron | 50.0% | |
| AGCAGGTTTAAGAGGGGGAT+GGG | + | chr3_1:7511637-7511656 | Msa0346790:intron | 50.0% | |
| ! | GTCAGACAGTTTGAGACCCA+AGG | - | chr3_1:7512336-7512355 | None:intergenic | 50.0% |
| ! | AAACCTTGATGTGCTGGCCA+AGG | - | chr3_1:7513008-7513027 | None:intergenic | 50.0% |
| CCATGCAAACCTTGATGTGC+TGG | - | chr3_1:7513014-7513033 | None:intergenic | 50.0% | |
| CCAGCACATCAAGGTTTGCA+TGG | + | chr3_1:7513011-7513030 | Msa0346790:CDS | 50.0% | |
| CACATGTGTCAGTGTCGTGT+CGG | + | chr3_1:7513744-7513763 | Msa0346790:intron | 50.0% | |
| AGAGAGGTGGTCAGAGAAAC+TGG | + | chr3_1:7513963-7513982 | Msa0346790:CDS | 50.0% | |
| ! | GGTGCCATGGTAGATTACAG+TGG | + | chr3_1:7514277-7514296 | Msa0346790:intron | 50.0% |
| GCCATGGTAGATTACAGTGG+CGG | + | chr3_1:7514280-7514299 | Msa0346790:intron | 50.0% | |
| TCCGCCACTGTAATCTACCA+TGG | - | chr3_1:7514284-7514303 | None:intergenic | 50.0% | |
| GCGTGTCAATTGCAGGGAAT+GGG | - | chr3_1:7514412-7514431 | None:intergenic | 50.0% | |
| AGCGTGTCAATTGCAGGGAA+TGG | - | chr3_1:7514413-7514432 | None:intergenic | 50.0% | |
| CGGTAAGGGATGGAATGATG+TGG | - | chr3_1:7514453-7514472 | None:intergenic | 50.0% | |
| !! | TTTGGATTGGCGGTAAGGGA+TGG | - | chr3_1:7514463-7514482 | None:intergenic | 50.0% |
| TTGCGCAGCACTATCTTCAC+TGG | + | chr3_1:7515249-7515268 | Msa0346790:intron | 50.0% | |
| GCAGCACTATCTTCACTGGA+TGG | + | chr3_1:7515253-7515272 | Msa0346790:intron | 50.0% | |
| TGAACCTCCTCCTAGAAAGC+TGG | + | chr3_1:7515332-7515351 | Msa0346790:CDS | 50.0% | |
| AACAGCTCCAGCTTTCTAGG+AGG | - | chr3_1:7515342-7515361 | None:intergenic | 50.0% | |
| GAGAACAGCTCCAGCTTTCT+AGG | - | chr3_1:7515345-7515364 | None:intergenic | 50.0% | |
| ! | GTGCGTTTGGTTTCACGGTA+GGG | - | chr3_1:7515623-7515642 | None:intergenic | 50.0% |
| ! | TGTGCGTTTGGTTTCACGGT+AGG | - | chr3_1:7515624-7515643 | None:intergenic | 50.0% |
| GAATGCTCGTATTGTGCGTG+AGG | + | chr3_1:7515900-7515919 | Msa0346790:intron | 50.0% | |
| !! | CTTGAGAAGGGTGCCTAGTA+CGG | - | chr3_1:7516130-7516149 | None:intergenic | 50.0% |
| !! | GCATGAGTTGGTGCAGTGGA+AGG | - | chr3_1:7510948-7510967 | None:intergenic | 55.0% |
| !! | CTGAGCATGAGTTGGTGCAG+TGG | - | chr3_1:7510952-7510971 | None:intergenic | 55.0% |
| AACAGGCCAATGCTCCTGGA+TGG | - | chr3_1:7511578-7511597 | None:intergenic | 55.0% | |
| AGGCGCGCAGGAGTAAAAAC+AGG | - | chr3_1:7511595-7511614 | None:intergenic | 55.0% | |
| ! | TTTTTACTCCTGCGCGCCTG+CGG | + | chr3_1:7511596-7511615 | Msa0346790:intron | 55.0% |
| CAAACTGTTGGGGAATCCGC+AGG | - | chr3_1:7511615-7511634 | None:intergenic | 55.0% | |
| CTGCGGATTCCCCAACAGTT+TGG | + | chr3_1:7511613-7511632 | Msa0346790:intron | 55.0% | |
| TTCCCCAACAGTTTGGGAGC+AGG | + | chr3_1:7511620-7511639 | Msa0346790:intron | 55.0% | |
| GAGCAGGTTTAAGAGGGGGA+TGG | + | chr3_1:7511636-7511655 | Msa0346790:intron | 55.0% | |
| AGGTTTAAGAGGGGGATGGG+AGG | + | chr3_1:7511640-7511659 | Msa0346790:intron | 55.0% | |
| GGTTTAAGAGGGGGATGGGA+GGG | + | chr3_1:7511641-7511660 | Msa0346790:intron | 55.0% | |
| CTTCCTTGGCCAGCACATCA+AGG | + | chr3_1:7513002-7513021 | Msa0346790:CDS | 55.0% | |
| CGACACGACACTGACACATG+TGG | - | chr3_1:7513746-7513765 | None:intergenic | 55.0% | |
| GAGGTGGTCAGAGAAACTGG+TGG | + | chr3_1:7513966-7513985 | Msa0346790:CDS | 55.0% | |
| ! | AGCTCCAGCTTTCTAGGAGG+AGG | - | chr3_1:7515339-7515358 | None:intergenic | 55.0% |
| CGTACTAGGCACCCTTCTCA+AGG | + | chr3_1:7516128-7516147 | Msa0346790:intron | 55.0% | |
| GGAATGTGGCGTCTCCATCC+AGG | + | chr3_1:7511561-7511580 | Msa0346790:intron | 60.0% | |
| ! | GCGTCTCCATCCAGGAGCAT+TGG | + | chr3_1:7511569-7511588 | Msa0346790:intron | 60.0% |
| ATAAGGGGAGAGGGCAGCAG+AGG | - | chr3_1:7514553-7514572 | None:intergenic | 60.0% | |
| TGGGGAATCCGCAGGCGCGC+AGG | - | chr3_1:7511607-7511626 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 7510928 | 7516712 | 7510928 | ID=Msa0346790;Name=Msa0346790 |
| chr3_1 | mRNA | 7510928 | 7516712 | 7510928 | ID=Msa0346790-mRNA-1;Parent=Msa0346790;Name=Msa0346790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=13|1|1|1|1|1|10|175|325 |
| chr3_1 | exon | 7510928 | 7511165 | 7510928 | ID=Msa0346790-mRNA-1:exon:2119;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7511376 | 7511414 | 7511376 | ID=Msa0346790-mRNA-1:exon:2120;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7512992 | 7513115 | 7512992 | ID=Msa0346790-mRNA-1:exon:2121;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7513453 | 7513514 | 7513453 | ID=Msa0346790-mRNA-1:exon:2122;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7513930 | 7513997 | 7513930 | ID=Msa0346790-mRNA-1:exon:2123;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7514862 | 7514911 | 7514862 | ID=Msa0346790-mRNA-1:exon:2124;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7515095 | 7515164 | 7515095 | ID=Msa0346790-mRNA-1:exon:2125;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7515257 | 7515380 | 7515257 | ID=Msa0346790-mRNA-1:exon:2126;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7515901 | 7516017 | 7515901 | ID=Msa0346790-mRNA-1:exon:2127;Parent=Msa0346790-mRNA-1 |
| chr3_1 | exon | 7516439 | 7516712 | 7516439 | ID=Msa0346790-mRNA-1:exon:2128;Parent=Msa0346790-mRNA-1 |
| chr3_1 | five_prime_UTR | 7510928 | 7510940 | 7510928 | ID=Msa0346790-mRNA-1:five_prime_utr;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7510941 | 7511165 | 7510941 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7511376 | 7511414 | 7511376 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7512992 | 7513115 | 7512992 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7513453 | 7513514 | 7513453 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7513930 | 7513997 | 7513930 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7514862 | 7514911 | 7514862 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7515095 | 7515164 | 7515095 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7515257 | 7515380 | 7515257 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7515901 | 7516017 | 7515901 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | CDS | 7516439 | 7516537 | 7516439 | ID=Msa0346790-mRNA-1:cds;Parent=Msa0346790-mRNA-1 |
| chr3_1 | three_prime_UTR | 7516538 | 7516712 | 7516538 | ID=Msa0346790-mRNA-1:three_prime_utr;Parent=Msa0346790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
