AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406020 MtrunA17_Chr4g0032021 99.485 194 1 0 8 201 363 556 1.62e-128 372
Msa1406020 MtrunA17_Chr4g0039651 72.021 193 54 0 8 200 309 501 1.70e-89 271
Msa1406020 MtrunA17_Chr4g0021771 35.385 195 117 3 8 196 308 499 3.10e-30 116
Msa1406020 MtrunA17_Chr3g0144361 33.673 196 123 1 8 196 293 488 5.20e-30 115
Msa1406020 MtrunA17_Chr7g0214451 34.518 197 118 3 8 196 283 476 1.63e-29 114
Msa1406020 MtrunA17_Chr2g0282031 33.854 192 124 1 8 196 306 497 2.50e-29 113
Msa1406020 MtrunA17_Chr7g0273261 34.694 196 119 4 8 199 47 237 8.38e-29 108
Msa1406020 MtrunA17_Chr4g0036021 34.184 196 122 1 8 196 289 484 1.01e-28 111
Msa1406020 MtrunA17_Chr7g0259471 34.343 198 119 3 8 199 281 473 1.72e-28 110
Msa1406020 MtrunA17_Chr7g0259221 32.828 198 122 3 8 199 283 475 7.33e-28 108
Msa1406020 MtrunA17_Chr1g0213631 33.846 195 123 1 8 196 235 429 7.60e-28 108
Msa1406020 MtrunA17_Chr5g0432581 33.168 202 126 3 8 201 284 484 1.46e-27 108
Msa1406020 MtrunA17_Chr7g0273281 34.872 195 116 3 8 196 303 492 1.60e-27 108
Msa1406020 MtrunA17_Chr4g0034681 32.843 204 124 2 8 201 293 493 2.58e-27 107
Msa1406020 MtrunA17_Chr1g0213611 32.338 201 121 2 8 196 328 525 3.63e-26 104
Msa1406020 MtrunA17_Chr8g0390521 33.673 196 124 1 8 197 274 469 8.92e-26 103
Msa1406020 MtrunA17_Chr6g0457781 35.079 191 118 3 9 196 352 539 8.02e-25 100
Msa1406020 MtrunA17_Chr4g0066581 31.633 196 124 3 8 197 293 484 4.53e-24 98.6
Msa1406020 MtrunA17_Chr8g0373531 32.995 197 123 2 8 196 284 479 1.32e-23 97.4
Msa1406020 MtrunA17_Chr3g0121674 30.882 204 131 2 2 195 79 282 1.57e-23 95.1
Msa1406020 MtrunA17_Chr6g0485661 31.771 192 122 3 8 191 312 502 1.89e-23 97.1
Msa1406020 MtrunA17_Chr7g0250881 34.555 191 119 2 9 196 312 499 3.76e-23 96.3
Msa1406020 MtrunA17_Chr8g0373181 33.668 199 118 4 8 196 288 482 1.82e-22 94.0
Msa1406020 MtrunA17_Chr2g0286721 28.788 198 131 3 8 199 290 483 5.42e-22 92.8
Msa1406020 MtrunA17_Chr1g0205691 33.488 215 123 6 4 201 278 489 7.13e-22 92.4
Msa1406020 MtrunA17_Chr8g0373191 32.367 207 120 4 8 201 260 459 1.13e-21 91.7
Msa1406020 MtrunA17_Chr4g0004821 29.688 192 126 3 13 200 287 473 1.42e-21 91.7
Msa1406020 MtrunA17_Chr1g0205671 32.000 200 125 3 11 201 292 489 1.91e-21 91.3
Msa1406020 MtrunA17_Chr5g0394341 33.498 203 122 7 9 201 290 489 1.32e-20 89.0
Msa1406020 MtrunA17_Chr5g0420841 32.487 197 120 5 11 196 291 485 6.90e-20 86.7
Msa1406020 MtrunA17_Chr6g0486021 32.461 191 122 3 13 200 301 487 1.06e-19 86.3
Msa1406020 MtrunA17_Chr1g0155221 30.500 200 124 5 8 196 290 485 1.07e-19 86.3
Msa1406020 MtrunA17_Chr4g0065311 33.679 193 116 5 12 195 289 478 1.17e-19 86.3
Msa1406020 MtrunA17_Chr1g0205681 33.000 200 123 3 11 201 293 490 1.34e-19 85.9
Msa1406020 MtrunA17_Chr3g0115711 35.897 195 113 5 11 195 290 482 2.54e-18 82.4
Msa1406020 MtrunA17_Chr4g0065351 35.233 193 113 5 12 195 132 321 3.19e-18 81.3
Msa1406020 MtrunA17_Chr4g0065324 34.021 194 114 4 12 195 297 486 3.34e-18 82.0
Msa1406020 MtrunA17_Chr8g0390261 33.679 193 116 4 12 195 296 485 8.32e-18 80.9
Msa1406020 MtrunA17_Chr8g0390141 32.828 198 119 5 8 195 292 485 1.10e-17 80.5
Msa1406020 MtrunA17_Chr3g0078991 30.256 195 126 5 11 197 294 486 2.02e-17 79.7
Msa1406020 MtrunA17_Chr2g0290181 42.609 115 62 1 91 201 444 558 2.08e-17 79.7
Msa1406020 MtrunA17_Chr3g0085971 29.442 197 126 4 11 196 291 485 2.75e-17 79.3
Msa1406020 MtrunA17_Chr6g0486681 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa1406020 MtrunA17_Chr6g0486671 31.771 192 121 4 12 195 296 485 2.94e-17 79.3
Msa1406020 MtrunA17_Chr5g0403831 29.648 199 131 3 8 197 295 493 5.60e-17 78.6
Msa1406020 MtrunA17_Chr3g0119401 29.442 197 127 3 9 199 342 532 1.19e-16 77.4
Msa1406020 MtrunA17_Chr3g0146061 30.500 200 127 3 8 195 524 723 1.30e-16 77.4
Msa1406020 MtrunA17_Chr3g0128171 31.633 196 121 6 11 195 245 438 1.52e-16 77.0
Msa1406020 MtrunA17_Chr3g0115751 32.828 198 115 6 11 195 296 488 2.91e-16 76.3
Msa1406020 MtrunA17_Chr3g0144261 32.338 201 122 5 8 195 514 713 3.94e-16 76.3
Msa1406020 MtrunA17_Chr4g0048411 31.818 198 120 6 11 196 292 486 9.55e-16 74.7
Msa1406020 MtrunA17_Chr8g0370151 31.500 200 125 3 8 195 145 344 1.20e-15 73.9
Msa1406020 MtrunA17_Chr3g0115741 33.333 198 114 6 11 195 294 486 1.43e-15 74.3
Msa1406020 MtrunA17_Chr3g0115721 34.848 198 111 6 11 195 291 483 1.88e-15 73.9
Msa1406020 MtrunA17_Chr7g0257631 32.984 191 118 4 13 195 330 518 2.44e-15 73.6
Msa1406020 MtrunA17_Chr5g0417611 28.283 198 129 5 11 197 293 488 2.85e-15 73.6
Msa1406020 MtrunA17_Chr8g0376631 38.000 100 62 0 98 197 451 550 3.29e-15 73.2
Msa1406020 MtrunA17_Chr5g0404181 36.937 111 66 2 86 196 22 128 3.46e-15 69.3
Msa1406020 MtrunA17_Chr3g0078791 31.156 199 98 7 11 195 237 410 5.44e-15 72.4
Msa1406020 MtrunA17_Chr3g0115781 29.293 198 124 5 11 196 293 486 5.87e-15 72.4
Msa1406020 MtrunA17_Chr3g0115731 31.980 197 118 4 11 195 270 462 8.44e-15 72.0
Msa1406020 MtrunA17_Chr5g0445601 30.890 191 122 4 13 195 296 484 2.33e-14 70.9
Msa1406020 MtrunA17_Chr3g0078971 28.500 200 121 5 11 196 293 484 5.51e-14 69.7
Msa1406020 MtrunA17_Chr3g0128081 30.583 206 121 8 11 201 292 490 6.87e-14 69.3
Msa1406020 MtrunA17_Chr2g0303731 35.789 95 61 0 103 197 457 551 9.79e-14 68.9
Msa1406020 MtrunA17_Chr4g0048051 34.653 202 118 6 11 201 292 490 1.15e-13 68.9
Msa1406020 MtrunA17_Chr5g0434251 35.789 95 61 0 102 196 42 136 1.26e-13 65.9
Msa1406020 MtrunA17_Chr5g0407441 30.000 200 128 3 8 195 506 705 1.76e-13 68.6
Msa1406020 MtrunA17_Chr8g0376611 36.170 94 60 0 103 196 387 480 3.78e-13 67.4
Msa1406020 MtrunA17_Chr5g0419321 28.643 199 128 3 8 193 532 729 4.23e-12 64.3
Msa1406020 MtrunA17_Chr1g0164851 29.442 197 125 5 11 196 291 484 5.16e-12 63.9
Msa1406020 MtrunA17_Chr1g0164871 28.934 197 126 5 11 196 291 484 8.98e-12 63.2
Msa1406020 MtrunA17_Chr2g0290161 40.000 115 65 1 91 201 351 465 1.09e-11 63.2
Msa1406020 MtrunA17_Chr5g0437021 28.708 209 120 8 11 201 291 488 6.01e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406020 AT5G59250.1 87.629 194 24 0 8 201 365 558 6.08e-114 336
Msa1406020 AT3G03090.1 70.466 193 57 0 8 200 311 503 7.20e-88 267
Msa1406020 AT5G17010.1 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa1406020 AT5G17010.3 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa1406020 AT5G17010.4 70.466 193 57 0 8 200 311 503 2.52e-87 266
Msa1406020 AT5G17010.2 51.333 150 46 1 51 200 318 440 1.91e-36 132
Msa1406020 AT5G27360.2 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa1406020 AT5G27360.5 37.000 200 115 4 8 201 172 366 3.37e-33 122
Msa1406020 AT5G27360.1 37.000 200 115 4 8 201 276 470 1.19e-32 122
Msa1406020 AT5G27360.3 37.000 200 115 4 8 201 324 518 1.54e-32 122
Msa1406020 AT5G27350.1 35.000 200 119 4 8 201 272 466 1.16e-30 117
Msa1406020 AT3G18830.1 34.010 197 123 1 8 197 300 496 3.18e-30 116
Msa1406020 AT3G05165.3 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa1406020 AT3G05165.2 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa1406020 AT3G05165.1 32.323 198 123 3 8 199 271 463 1.07e-27 108
Msa1406020 AT2G20780.2 33.854 192 124 1 8 196 248 439 1.70e-27 108
Msa1406020 AT2G20780.1 33.854 192 124 1 8 196 306 497 2.17e-27 108
Msa1406020 AT5G18840.1 31.658 199 126 3 9 201 286 480 2.60e-27 108
Msa1406020 AT2G16120.1 32.828 198 125 1 8 197 290 487 1.12e-26 106
Msa1406020 AT2G16130.1 32.828 198 125 1 8 197 290 487 1.51e-26 106
Msa1406020 AT3G05150.1 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa1406020 AT3G05150.3 33.000 200 122 4 8 200 276 470 1.81e-26 105
Msa1406020 AT3G05150.2 33.000 200 122 4 8 200 276 470 2.59e-26 105
Msa1406020 AT3G05160.3 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa1406020 AT3G05160.2 32.323 198 123 3 8 199 213 405 3.10e-26 104
Msa1406020 AT4G36670.1 33.838 198 122 2 8 197 281 477 4.78e-26 104
Msa1406020 AT3G05160.1 32.323 198 123 3 8 199 262 454 5.80e-26 103
Msa1406020 AT2G43330.1 34.010 197 123 3 8 197 281 477 8.74e-26 103
Msa1406020 AT1G08930.1 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa1406020 AT1G08930.2 32.143 196 122 4 8 197 299 489 5.21e-25 101
Msa1406020 AT2G48020.2 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa1406020 AT2G48020.1 30.964 197 123 5 8 197 269 459 6.31e-25 101
Msa1406020 AT1G54730.2 33.333 198 121 4 8 199 273 465 1.81e-24 100
Msa1406020 AT2G18480.1 32.487 197 125 2 8 197 286 481 1.89e-24 100
Msa1406020 AT1G79820.2 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa1406020 AT1G79820.1 33.333 192 121 2 13 201 305 492 7.62e-23 95.5
Msa1406020 AT1G08900.5 29.231 195 127 4 13 201 229 418 2.97e-22 93.6
Msa1406020 AT1G08900.3 29.231 195 127 4 13 201 263 452 4.47e-22 93.2
Msa1406020 AT1G08900.1 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa1406020 AT1G08900.2 29.231 195 127 4 13 201 271 460 4.68e-22 93.2
Msa1406020 AT1G08890.1 32.308 195 117 6 13 199 273 460 2.76e-21 90.9
Msa1406020 AT5G26340.1 32.020 203 125 5 9 201 291 490 4.31e-21 90.5
Msa1406020 AT1G08920.1 29.293 198 129 4 8 199 273 465 4.87e-21 90.5
Msa1406020 AT1G75220.1 32.000 200 122 4 8 197 289 484 3.58e-20 87.8
Msa1406020 AT3G05155.1 29.146 199 127 4 8 198 265 457 1.36e-19 86.3
Msa1406020 AT1G08920.2 28.293 205 129 5 8 199 273 472 4.39e-19 84.7
Msa1406020 AT5G16150.2 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa1406020 AT5G16150.1 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa1406020 AT5G16150.3 32.474 194 119 3 9 196 352 539 4.68e-19 84.7
Msa1406020 AT4G04750.3 30.769 195 124 3 9 197 324 513 6.79e-19 84.3
Msa1406020 AT3G51490.2 31.500 200 125 4 8 195 517 716 7.11e-19 84.3
Msa1406020 AT4G04750.1 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa1406020 AT4G04750.2 30.769 195 124 3 9 197 280 469 7.78e-19 84.0
Msa1406020 AT3G51490.3 31.500 200 125 4 8 195 467 666 7.84e-19 84.3
Msa1406020 AT4G04760.3 32.308 195 121 4 9 197 217 406 1.42e-18 83.2
Msa1406020 AT4G04760.1 32.308 195 121 4 9 197 276 465 1.67e-18 83.2
Msa1406020 AT1G19450.1 32.512 203 117 7 8 197 290 485 2.36e-18 82.8
Msa1406020 AT5G23270.1 33.005 203 119 7 11 201 294 491 3.18e-18 82.4
Msa1406020 AT1G79820.3 35.329 167 105 1 38 201 278 444 3.30e-18 82.0
Msa1406020 AT4G02050.2 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa1406020 AT4G02050.1 32.323 198 114 5 11 195 294 484 3.70e-18 82.4
Msa1406020 AT1G79820.5 35.329 167 105 1 38 201 216 382 3.72e-18 81.6
Msa1406020 AT3G05165.6 29.167 168 108 3 8 169 271 433 8.24e-18 81.3
Msa1406020 AT4G16480.2 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa1406020 AT4G16480.3 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa1406020 AT4G16480.1 42.857 105 57 1 92 196 456 557 3.07e-17 79.7
Msa1406020 AT1G54730.5 28.571 196 112 4 8 199 273 444 4.40e-17 79.0
Msa1406020 AT1G77210.3 34.314 204 108 6 8 195 143 336 6.75e-17 78.2
Msa1406020 AT3G05960.1 34.483 203 119 7 9 201 286 484 8.55e-17 78.2
Msa1406020 AT1G77210.2 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa1406020 AT1G77210.1 34.314 204 108 6 8 195 292 485 8.77e-17 78.2
Msa1406020 AT5G26250.1 33.663 202 122 6 9 201 287 485 1.10e-16 77.8
Msa1406020 AT3G20460.1 28.796 191 113 4 23 201 309 488 1.85e-16 77.4
Msa1406020 AT4G21480.1 32.487 197 118 6 12 196 291 484 2.84e-16 76.6
Msa1406020 AT3G05400.1 28.205 195 129 4 8 196 267 456 3.03e-16 76.6
Msa1406020 AT3G05400.2 28.205 195 129 4 8 196 247 436 3.19e-16 76.6
Msa1406020 AT1G67300.1 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa1406020 AT1G67300.3 29.688 192 126 3 13 200 304 490 3.25e-16 76.6
Msa1406020 AT1G05030.2 29.231 195 124 3 9 196 275 462 3.45e-16 76.6
Msa1406020 AT1G50310.2 33.163 196 117 6 11 195 151 343 3.55e-16 76.3
Msa1406020 AT3G05165.4 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa1406020 AT3G05165.5 29.299 157 101 2 8 158 271 423 4.36e-16 76.3
Msa1406020 AT1G05030.1 29.231 195 124 3 9 196 327 514 4.54e-16 76.3
Msa1406020 AT1G50310.1 33.163 196 117 6 11 195 294 486 5.07e-16 75.9
Msa1406020 AT1G20840.2 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa1406020 AT1G20840.1 29.524 210 116 4 8 195 516 715 5.77e-16 75.9
Msa1406020 AT1G54730.3 31.646 158 98 3 8 159 273 426 5.98e-16 75.9
Msa1406020 AT3G51490.1 30.102 196 125 4 8 195 517 708 7.52e-16 75.9
Msa1406020 AT4G04760.2 31.088 193 123 5 9 197 276 462 1.04e-15 75.1
Msa1406020 AT2G35740.1 42.857 105 57 1 92 196 455 556 1.13e-15 75.1
Msa1406020 AT1G67300.2 29.534 193 126 4 13 200 304 491 1.22e-15 75.1
Msa1406020 AT1G34580.2 29.231 195 124 5 12 195 246 437 1.30e-15 74.7
Msa1406020 AT1G34580.1 29.231 195 124 5 12 195 296 487 1.69e-15 74.7
Msa1406020 AT1G30220.1 41.237 97 53 1 104 196 457 553 2.10e-15 74.3
Msa1406020 AT3G19940.1 32.000 200 114 7 11 195 293 485 2.16e-15 74.3
Msa1406020 AT4G35300.9 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa1406020 AT4G35300.2 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa1406020 AT4G35300.3 31.000 200 126 3 8 195 513 712 2.30e-15 74.3
Msa1406020 AT4G35300.4 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.8 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.6 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.11 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.1 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.10 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.7 31.000 200 126 3 8 195 523 722 2.49e-15 74.3
Msa1406020 AT4G35300.5 30.808 198 125 3 8 193 326 523 4.17e-15 73.6
Msa1406020 AT1G07340.1 32.057 209 117 7 9 201 288 487 7.30e-15 72.8
Msa1406020 AT1G11260.1 30.457 197 122 6 11 195 292 485 2.23e-14 71.2
Msa1406020 AT5G27360.4 35.385 130 74 3 8 131 276 401 3.21e-13 67.8
Msa1406020 AT1G79820.4 31.884 138 87 2 9 143 301 434 5.28e-13 67.4
Msa1406020 AT3G19930.1 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa1406020 AT3G19930.2 28.934 197 126 5 11 196 291 484 1.33e-12 66.2
Msa1406020 AT1G08920.3 25.949 158 107 3 8 159 273 426 9.21e-12 63.5

Find 157 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGTCACTTCAAGATTT+TGG 0.110124 tig0023178:-40367 None:intergenic
TGGTGACAAATGATTGTTTA+TGG 0.216441 tig0023178:-33360 None:intergenic
TCCCTCTATGGGGCTCTTCT+TGG 0.227190 tig0023178:+34787 Msa1406020:five_prime_UTR
GCATTGGGTGGCTTGCTATT+TGG 0.229582 tig0023178:+34457 Msa1406020:five_prime_UTR
TTAGCAGGAAGGCTGCTTTA+TGG 0.247331 tig0023178:+35210 Msa1406020:five_prime_UTR
CTTCATCGTCTTGGGGATTC+TGG 0.254886 tig0023178:+35404 Msa1406020:five_prime_UTR
GGCTGCCAATTGTTGCTGTT+GGG 0.261289 tig0023178:+36536 Msa1406020:CDS
TTGAATTCTTTACTCTTTGA+TGG 0.263452 tig0023178:-33289 None:intergenic
TTGCTATTTGGTTATGATAT+TGG 0.265731 tig0023178:+34469 Msa1406020:five_prime_UTR
TGCTCCACTTGCTGTGTTAA+TGG 0.274481 tig0023178:+35572 Msa1406020:five_prime_UTR
AGCAACCACCGAGGAGATTC+GGG 0.294580 tig0023178:-35615 None:intergenic
TTTGAATTGCAGATATCATT+TGG 0.297753 tig0023178:+39988 Msa1406020:intron
GCTAAAGTTTCAGTTGTTAT+TGG 0.319773 tig0023178:+36196 Msa1406020:CDS
AAAGAACTCTTCATCGTCTT+GGG 0.324920 tig0023178:+35396 Msa1406020:five_prime_UTR
GTCCTAAAAGTGGACGATTT+GGG 0.331656 tig0023178:+36338 Msa1406020:CDS
TTTGATCAGTTTGTAGAATC+AGG 0.335063 tig0023178:-33160 None:intergenic
TGTCCTAAAAGTGGACGATT+TGG 0.336456 tig0023178:+36337 Msa1406020:CDS
TGTTGTTGATGATGCCATTT+GGG 0.337414 tig0023178:-33228 None:intergenic
ATCTGTTGGTGAATCTTTAG+AGG 0.350880 tig0023178:-33113 None:intergenic
GGGCTGCCAATTGTTGCTGT+TGG 0.358412 tig0023178:+36535 Msa1406020:CDS
TAGGTCAGTGGTTCCCTCTA+TGG 0.360177 tig0023178:+34775 Msa1406020:intron
AAGCAACCACCGAGGAGATT+CGG 0.364539 tig0023178:-35616 None:intergenic
CTAATGCAATGGCCGCAAAA+AGG 0.369183 tig0023178:-40278 None:intergenic
TTATGCAGGTCCCATTCTTC+AGG 0.371687 tig0023178:+36048 Msa1406020:CDS
AGTGCGAAGTGGGAAGATTT+CGG 0.375828 tig0023178:-40034 None:intergenic
CTTTGCATTCTCACCATTGA+AGG 0.377650 tig0023178:+40116 Msa1406020:CDS
CTGCTTTATGGACTTGGTAT+AGG 0.378257 tig0023178:+35222 Msa1406020:five_prime_UTR
TCTGCTTATTATAAATTTCT+CGG 0.392006 tig0023178:+36511 Msa1406020:CDS
CAAGTTTCTGCAATGTATAA+AGG 0.395816 tig0023178:-35339 None:intergenic
AGGTCAGTGGTTCCCTCTAT+GGG 0.396820 tig0023178:+34776 Msa1406020:intron
CTCAAAGCCGTTCAAGGAAA+AGG 0.398628 tig0023178:+35639 Msa1406020:five_prime_UTR
TTTGCAGTTGCTGATTTCAT+TGG 0.402124 tig0023178:+34823 Msa1406020:five_prime_UTR
TTGAATTGCAGATATCATTT+GGG 0.403806 tig0023178:+39989 Msa1406020:intron
GGGAGAAGACCTCTGCTGAT+TGG 0.408128 tig0023178:+36359 Msa1406020:CDS
CACTACCAAGTACATACAAC+AGG 0.412932 tig0023178:-35152 None:intergenic
ACAATTAAGTACCTGAAGAA+TGG 0.413009 tig0023178:-36059 None:intergenic
ATTCCACTGCAGGAGTATCT+TGG 0.414752 tig0023178:+40237 Msa1406020:intron
AAAAGAACTCTTCATCGTCT+TGG 0.415813 tig0023178:+35395 Msa1406020:five_prime_UTR
TTGTTTCCCTGGGCAAACTA+AGG 0.416488 tig0023178:+35691 Msa1406020:five_prime_UTR
GCTCCACTTGCTGTGTTAAT+GGG 0.419247 tig0023178:+35573 Msa1406020:five_prime_UTR
GGAAGGCTGCTTTATGGACT+TGG 0.423684 tig0023178:+35216 Msa1406020:five_prime_UTR
TTCCATTCAGCTTGGTCTTG+TGG 0.424172 tig0023178:+34650 Msa1406020:five_prime_UTR
AAGCTGAATGGAAGAAAGAT+TGG 0.431812 tig0023178:-34640 None:intergenic
GAACTTGGTGTTCTCTTAGC+AGG 0.432287 tig0023178:+35195 Msa1406020:five_prime_UTR
GATACCATCAGCCAACTTAT+CGG 0.433272 tig0023178:-40012 None:intergenic
CAAGTTACTCAAATCACATC+AGG 0.433338 tig0023178:+40507 Msa1406020:three_prime_UTR
AAACTAAGGGGCCGGCCACT+TGG 0.434562 tig0023178:+35705 Msa1406020:five_prime_UTR
GCCGGCCCCTTAGTTTGCCC+AGG 0.434700 tig0023178:-35698 None:intergenic
CTTATTCTTGCTGCCCCAAA+TGG 0.435118 tig0023178:+33214 Msa1406020:five_prime_UTR
ACATAATTCCAATAGATAAC+AGG 0.438031 tig0023178:+36007 Msa1406020:intron
TATGATACATTCACATCAAA+AGG 0.439235 tig0023178:-40398 None:intergenic
GTGTTGTTGATGATGCCATT+TGG 0.449019 tig0023178:-33229 None:intergenic
TTATGGACTTGGTATAGGTC+TGG 0.452748 tig0023178:+35227 Msa1406020:five_prime_UTR
GGAAAAGGCAATTGTTTCCC+TGG 0.453254 tig0023178:+35680 Msa1406020:five_prime_UTR
AACAGCATTGGCAGCGAAGT+TGG 0.454377 tig0023178:-40088 None:intergenic
TTGCTTCTCAAAGCCGTTCA+AGG 0.455548 tig0023178:+35633 Msa1406020:five_prime_UTR
GGGGCTAGTATTATTTCAAC+AGG 0.459642 tig0023178:+35860 Msa1406020:CDS
AGTTGTTATTGGCTTATTCA+AGG 0.462352 tig0023178:+36207 Msa1406020:CDS
AACGCCCCAACAGCAACAAT+TGG 0.464360 tig0023178:-36541 None:intergenic
GAAGAGTGAGCGGTAAGAAG+TGG 0.468368 tig0023178:-33398 None:intergenic
CTGAGCTTAGCGGTGTCGCT+TGG 0.469539 tig0023178:+34616 Msa1406020:five_prime_UTR
CAATTAAGTACCTGAAGAAT+GGG 0.470930 tig0023178:-36058 None:intergenic
GCTAAGAGAACACCAAGTTC+TGG 0.473041 tig0023178:-35192 None:intergenic
AATAGCAAGCCACCCAATGC+AGG 0.473802 tig0023178:-34454 None:intergenic
AATCTTTCTTCCATTCAGCT+TGG 0.477827 tig0023178:+34642 Msa1406020:five_prime_UTR
TATCATTTGGGCCGATAAGT+TGG 0.479888 tig0023178:+40001 Msa1406020:CDS
CAAGCGCAGGAGTATTCTGC+TGG 0.483479 tig0023178:+33522 Msa1406020:five_prime_UTR
CCCTGGGCAAACTAAGGGGC+CGG 0.484017 tig0023178:+35697 Msa1406020:five_prime_UTR
GAAGTCTGCCTATGAAGATC+AGG 0.486030 tig0023178:+35773 Msa1406020:exon
CCCACTTCGCACTAGAGGAC+GGG 0.489293 tig0023178:+40044 Msa1406020:CDS
TGTTTCCCTGGGCAAACTAA+GGG 0.494124 tig0023178:+35692 Msa1406020:five_prime_UTR
TATGATATTGGTGCCACATC+CGG 0.495216 tig0023178:+34481 Msa1406020:five_prime_UTR
AAGACCAAGAAAATTTCTCT+TGG 0.500479 tig0023178:-33572 None:intergenic
CCAAGAAAATTTCTCTTGGT+CGG 0.502343 tig0023178:-33568 None:intergenic
CATGGCTGTTTGTTATCTGT+TGG 0.506259 tig0023178:-33127 None:intergenic
ATGTTATATATCTAGAGTGC+TGG 0.506363 tig0023178:+36151 Msa1406020:intron
ATTCTTTGTCACCAAGTGGC+CGG 0.507367 tig0023178:-35716 None:intergenic
TCTTTACGTTGGTTGCTACC+AGG 0.507374 tig0023178:+36567 Msa1406020:CDS
CTTGCTGTGTTAATGGGACT+CGG 0.509742 tig0023178:+35579 Msa1406020:five_prime_UTR
TGAAATTGTAGCACCGGATG+TGG 0.509979 tig0023178:-34494 None:intergenic
GAATCAGGAGTGAGGAATCA+TGG 0.510204 tig0023178:-33145 None:intergenic
GCTGCCAATTGTTGCTGTTG+GGG 0.510591 tig0023178:+36537 Msa1406020:CDS
CTCGGATTCCTGATCTTCAT+AGG 0.511530 tig0023178:-35781 None:intergenic
GCTTTCAGATTAGTACAGTA+GGG 0.511807 tig0023178:+35523 Msa1406020:five_prime_UTR
CCTAGTGTTCTGTATTATGC+AGG 0.524477 tig0023178:+36034 Msa1406020:CDS
ATTGTATATATCACATGTGT+GGG 0.524514 tig0023178:+40430 Msa1406020:three_prime_UTR
CGGTGCTACAATTTCACTGC+AGG 0.525053 tig0023178:+34501 Msa1406020:five_prime_UTR
ACTGCCACAGCACCAGAACT+TGG 0.525417 tig0023178:+35180 Msa1406020:five_prime_UTR
TTCTGGACAGGTTCAAGCGC+AGG 0.528839 tig0023178:+33509 Msa1406020:intron
CTGATGTGATTTGAGTAACT+TGG 0.529187 tig0023178:-40506 None:intergenic
CTGCTGATTGGAGGTGTCAG+TGG 0.531307 tig0023178:+36371 Msa1406020:CDS
ATCTTCCCACTTCGCACTAG+AGG 0.532990 tig0023178:+40039 Msa1406020:CDS
AGAAGACCTCTGCTGATTGG+AGG 0.533132 tig0023178:+36362 Msa1406020:CDS
ACTTCTGTCCCAGAGACAAA+AGG 0.535446 tig0023178:+40321 Msa1406020:CDS
CGACTCTCCCCGAATCTCCT+CGG 0.539213 tig0023178:+35607 Msa1406020:five_prime_UTR
GAAATTTATAATAAGCAGAA+AGG 0.540216 tig0023178:-36507 None:intergenic
TACCACAAGACCAAGCTGAA+TGG 0.542358 tig0023178:-34652 None:intergenic
CTGCAGTGAAATTGTAGCAC+CGG 0.542977 tig0023178:-34500 None:intergenic
CCTGCATAATACAGAACACT+AGG 0.543440 tig0023178:-36034 None:intergenic
ATCGGTTGCTGTCCTAAAAG+TGG 0.545652 tig0023178:+36328 Msa1406020:CDS
GCCAAGAAGAGCCCCATAGA+GGG 0.547197 tig0023178:-34788 None:intergenic
TGCAAAGGTAACAACAGCAT+TGG 0.547945 tig0023178:-40100 None:intergenic
CTTATTATAAATTTCTCGGA+GGG 0.549041 tig0023178:+36515 Msa1406020:CDS
GAGTACTTACTTGGAATCTA+CGG 0.549078 tig0023178:-33427 None:intergenic
TCACAGTCACCTGAGCTTAG+CGG 0.551554 tig0023178:+34606 Msa1406020:intron
TCCTAAAAGTGGACGATTTG+GGG 0.552375 tig0023178:+36339 Msa1406020:CDS
AAGAACTCTTCATCGTCTTG+GGG 0.554273 tig0023178:+35397 Msa1406020:five_prime_UTR
AATGAATTGCAGGCTATGCA+TGG 0.556209 tig0023178:+35312 Msa1406020:intron
GCAGCCCTGTTGTATGTACT+TGG 0.557623 tig0023178:+35147 Msa1406020:five_prime_UTR
AGAAAGGAGAACTAAAGATA+AGG 0.558234 tig0023178:-36491 None:intergenic
AGCCAAGAAGAGCCCCATAG+AGG 0.560695 tig0023178:-34789 None:intergenic
CCCGTCCTCTAGTGCGAAGT+GGG 0.561592 tig0023178:-40044 None:intergenic
CAAGCGACACCGCTAAGCTC+AGG 0.561862 tig0023178:-34615 None:intergenic
CCACTTCGCACTAGAGGACG+GGG 0.565068 tig0023178:+40045 Msa1406020:CDS
AGTCCCATTAACACAGCAAG+TGG 0.566767 tig0023178:-35576 None:intergenic
CCGGCCCCTTAGTTTGCCCA+GGG 0.566966 tig0023178:-35697 None:intergenic
AGCTTTCAGATTAGTACAGT+AGG 0.568312 tig0023178:+35522 Msa1406020:five_prime_UTR
TCCCACTTCGCACTAGAGGA+CGG 0.571506 tig0023178:+40043 Msa1406020:CDS
AACACCAAGTTCTGGTGCTG+TGG 0.571690 tig0023178:-35184 None:intergenic
CATTGTATATATCACATGTG+TGG 0.573595 tig0023178:+40429 Msa1406020:three_prime_UTR
TCAGATTCTTTGTCACCAAG+TGG 0.579152 tig0023178:-35720 None:intergenic
GAAAAGGCAATTGTTTCCCT+GGG 0.582828 tig0023178:+35681 Msa1406020:five_prime_UTR
GGGGCGTTGCTTCTTTACGT+TGG 0.589105 tig0023178:+36556 Msa1406020:CDS
TGGGCCGATAAGTTGGCTGA+TGG 0.598976 tig0023178:+40008 Msa1406020:CDS
CACAAGTGACACTAATGCAA+TGG 0.600703 tig0023178:-40289 None:intergenic
AGAGTCCCACGGATTTGTGA+TGG 0.602252 tig0023178:-35363 None:intergenic
CCCCGTCCTCTAGTGCGAAG+TGG 0.606766 tig0023178:-40045 None:intergenic
TTGGTGTTCTCTTAGCAGGA+AGG 0.607143 tig0023178:+35199 Msa1406020:five_prime_UTR
GGGAGGAAGCGACAACTCAT+CGG 0.612912 tig0023178:+35123 Msa1406020:intron
CTTTCAGATTAGTACAGTAG+GGG 0.614719 tig0023178:+35524 Msa1406020:five_prime_UTR
GCTTCCTGCATCACACACAC+TGG 0.625199 tig0023178:+33082 None:intergenic
AGGCAGACTTCAACGAGACA+AGG 0.627144 tig0023178:-35761 None:intergenic
ATGGAAGAAGAAATAATGCG+TGG 0.628626 tig0023178:-33341 None:intergenic
ATAGCAAGCCACCCAATGCA+GGG 0.629494 tig0023178:-34453 None:intergenic
GGTCAGTGGTTCCCTCTATG+GGG 0.636174 tig0023178:+34777 Msa1406020:intron
CTTCAATGGTGAGAATGCAA+AGG 0.636883 tig0023178:-40115 None:intergenic
GTTTCCCTGGGCAAACTAAG+GGG 0.640750 tig0023178:+35693 Msa1406020:five_prime_UTR
TTTCAGATTAGTACAGTAGG+GGG 0.644587 tig0023178:+35525 Msa1406020:five_prime_UTR
CTTGTCCATCACAAATCCGT+GGG 0.645682 tig0023178:+35358 Msa1406020:five_prime_UTR
AAGCGCAGGAGTATTCTGCT+GGG 0.648733 tig0023178:+33523 Msa1406020:five_prime_UTR
ACTTGTCCATCACAAATCCG+TGG 0.650114 tig0023178:+35357 Msa1406020:five_prime_UTR
GCTTATTATAAATTTCTCGG+AGG 0.651466 tig0023178:+36514 Msa1406020:CDS
TTAATGATACTAGAGTCCCA+CGG 0.652488 tig0023178:-35374 None:intergenic
CTCTCCCCGAATCTCCTCGG+TGG 0.653850 tig0023178:+35610 Msa1406020:five_prime_UTR
CTATGAAGATCAGGAATCCG+AGG 0.658223 tig0023178:+35782 Msa1406020:exon
AGTGGATAAGTGACACGTGT+TGG 0.663963 tig0023178:-33380 None:intergenic
TAATGTCAAACATAGGTCAG+TGG 0.676967 tig0023178:+34763 Msa1406020:intron
CCTGTAGTTAGTAATGACAT+CGG 0.683946 tig0023178:+36310 Msa1406020:intron
CTGACACCTCCAATCAGCAG+AGG 0.685495 tig0023178:-36368 None:intergenic
AAGTTACTCAAATCACATCA+GGG 0.687402 tig0023178:+40508 Msa1406020:three_prime_UTR
AGTTTGTAGAATCAGGAGTG+AGG 0.687548 tig0023178:-33153 None:intergenic
GTTGTTGATGATGCCATTTG+GGG 0.691111 tig0023178:-33227 None:intergenic
CACTTCGCACTAGAGGACGG+GGG 0.710664 tig0023178:+40046 Msa1406020:CDS
ACGGTTATGAGAAGAGTGAG+CGG 0.731944 tig0023178:-33408 None:intergenic
GCAACCACCGAGGAGATTCG+GGG 0.734795 tig0023178:-35614 None:intergenic
ACTACCAAGTACATACAACA+GGG 0.734915 tig0023178:-35151 None:intergenic
GCTTTGAGAAGCAACCACCG+AGG 0.801181 tig0023178:-35624 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACATATATATAATCTA+CGG - tig0023178:36139-36158 None:intergenic 10.0%
!! TAAATTTCAATTATTATGCT+GGG + tig0023178:33907-33926 Msa1406020:intron 15.0%
!! ATCTATAATTCTATATGTAA+TGG - tig0023178:35267-35286 None:intergenic 15.0%
!! TAGAAATGAAAAATCTAAAT+AGG - tig0023178:36237-36256 None:intergenic 15.0%
!!! CAAAAATGTCATAATTTTAT+TGG - tig0023178:36971-36990 None:intergenic 15.0%
!! ACAAAATTGACAAAAAAAAA+TGG + tig0023178:37101-37120 Msa1406020:intron 15.0%
!!! TAATAAGTTGTTTTGATAAA+AGG + tig0023178:37319-37338 Msa1406020:intron 15.0%
!!! AATAAGTTGTTTTGATAAAA+GGG + tig0023178:37320-37339 Msa1406020:intron 15.0%
!!! AATTTTGTTTATTCATCTTC+TGG + tig0023178:33492-33511 Msa1406020:intron 20.0%
!! ATGTGAAAAACTGTAATAAA+TGG + tig0023178:33692-33711 Msa1406020:intron 20.0%
!! TGTGAAAAACTGTAATAAAT+GGG + tig0023178:33693-33712 Msa1406020:intron 20.0%
!! CTAAATTTCAATTATTATGC+TGG + tig0023178:33906-33925 Msa1406020:intron 20.0%
!! AAATTTCAATTATTATGCTG+GGG + tig0023178:33908-33927 Msa1406020:intron 20.0%
!! TTCATATAAGTTATAAGCAA+TGG - tig0023178:33941-33960 None:intergenic 20.0%
!! AAACTGTCCAAATTATTATA+AGG + tig0023178:34154-34173 Msa1406020:intron 20.0%
!!! ATTAATTTGGATAAAACACT+AGG + tig0023178:35102-35121 Msa1406020:intron 20.0%
!!! TTAATTTGGATAAAACACTA+GGG + tig0023178:35103-35122 Msa1406020:intron 20.0%
!! TCAATATAACATTAGTAAAG+TGG - tig0023178:35945-35964 None:intergenic 20.0%
!! CTTTACTAATGTTATATTGA+AGG + tig0023178:35945-35964 Msa1406020:intron 20.0%
!! ATGTTATATTGAAGGAAATA+TGG + tig0023178:35953-35972 Msa1406020:intron 20.0%
!! GAAATTTATAATAAGCAGAA+AGG - tig0023178:36510-36529 None:intergenic 20.0%
!! TCTGCTTATTATAAATTTCT+CGG + tig0023178:36511-36530 Msa1406020:CDS 20.0%
!!! ATTATTTTTGCCATAGAATT+CGG + tig0023178:36671-36690 Msa1406020:intron 20.0%
!!! AGAATTTTTCATTTATTGCT+AGG - tig0023178:36762-36781 None:intergenic 20.0%
!!! GGTGAAATACTTTTTTTTTT+GGG - tig0023178:36828-36847 None:intergenic 20.0%
!!! TGGTGAAATACTTTTTTTTT+TGG - tig0023178:36829-36848 None:intergenic 20.0%
!! ATCGATATTAAATTGTGAAT+TGG + tig0023178:36889-36908 Msa1406020:intron 20.0%
!!! TTTATTGGTAATGTATCTTA+CGG - tig0023178:36956-36975 None:intergenic 20.0%
!! AATCAAATGAAAAAGAAAAG+TGG + tig0023178:37070-37089 Msa1406020:intron 20.0%
!! AATTGACAAAAAAAAATGGT+TGG + tig0023178:37105-37124 Msa1406020:intron 20.0%
!! AACCCTTAATATTTAGAAAA+GGG + tig0023178:37244-37263 Msa1406020:intron 20.0%
!!! ATCCCTTTTCTAAATATTAA+GGG - tig0023178:37249-37268 None:intergenic 20.0%
!!! AATCCCTTTTCTAAATATTA+AGG - tig0023178:37250-37269 None:intergenic 20.0%
!!! GATCATATTTTCAAATTACA+TGG - tig0023178:38594-38613 None:intergenic 20.0%
!! TGATATTTGACATAAATCTA+CGG - tig0023178:39968-39987 None:intergenic 20.0%
!! CTTCAATAAGAAAATAAAAC+TGG - tig0023178:40159-40178 None:intergenic 20.0%
! TTGAATTCTTTACTCTTTGA+TGG - tig0023178:33292-33311 None:intergenic 25.0%
! AAAAAAGTGACAGAAACATA+CGG - tig0023178:33609-33628 None:intergenic 25.0%
!!! TTTTTTTTATTTCTCTCCTG+AGG + tig0023178:33632-33651 Msa1406020:intron 25.0%
! ATTTCAATTAAGACCTTGAT+TGG + tig0023178:33835-33854 Msa1406020:intron 25.0%
! AATTAGAATGTGTTTGTGTT+TGG - tig0023178:34236-34255 None:intergenic 25.0%
!! ACACAAACACATTCTAATTT+TGG + tig0023178:34237-34256 Msa1406020:intron 25.0%
!!! TTGCTATTTGGTTATGATAT+TGG + tig0023178:34469-34488 Msa1406020:five_prime_UTR 25.0%
!! TCTTATTTACATTATCCAGA+AGG + tig0023178:34856-34875 Msa1406020:intron 25.0%
! TGTAAAAATCTTTACACTGA+CGG - tig0023178:34935-34954 None:intergenic 25.0%
!!! TTTTCAAGATTTGAAGGAAA+AGG + tig0023178:35665-35684 Msa1406020:five_prime_UTR 25.0%
! ACATAATTCCAATAGATAAC+AGG + tig0023178:36007-36026 Msa1406020:intron 25.0%
!!! CACTTTTCTTTTAATTGTGT+AGG + tig0023178:36468-36487 Msa1406020:intron 25.0%
! CTTATTATAAATTTCTCGGA+GGG + tig0023178:36515-36534 Msa1406020:CDS 25.0%
! ATAATCAAATACTGTTGAAG+AGG - tig0023178:36656-36675 None:intergenic 25.0%
! AAATGAAAAAGAAAAGTGGT+TGG + tig0023178:37074-37093 Msa1406020:intron 25.0%
!!! GATTAAGAAGTGGATTTTAT+CGG - tig0023178:37221-37240 None:intergenic 25.0%
! ATAAAATCCACTTCTTAATC+AGG + tig0023178:37221-37240 Msa1406020:intron 25.0%
! GAACCCTTAATATTTAGAAA+AGG + tig0023178:37243-37262 Msa1406020:intron 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG + tig0023178:37465-37484 Msa1406020:intron 25.0%
!!! TGGTAACCATTTAATTTTTG+TGG - tig0023178:38700-38719 None:intergenic 25.0%
! GAAAAGGAAAATTAGTCATT+GGG - tig0023178:39001-39020 None:intergenic 25.0%
! AGAAAAGGAAAATTAGTCAT+TGG - tig0023178:39002-39021 None:intergenic 25.0%
! TAGAAATGTTTGAGTCAATA+AGG + tig0023178:39144-39163 Msa1406020:intron 25.0%
! AGAAATGTTTGAGTCAATAA+GGG + tig0023178:39145-39164 Msa1406020:intron 25.0%
! TTTGACATTCAATACAAAGA+GGG - tig0023178:39230-39249 None:intergenic 25.0%
! ATTTGACATTCAATACAAAG+AGG - tig0023178:39231-39250 None:intergenic 25.0%
! TAGCTATCATATATCATATG+CGG - tig0023178:39390-39409 None:intergenic 25.0%
! TTAGATTTATGTGAGTTGTA+AGG - tig0023178:39689-39708 None:intergenic 25.0%
!! TAAAACATTCTAGCTAGTAA+AGG + tig0023178:37465-37484 Msa1406020:intron 25.0%
! TATACTATCACATAGTGAAT+CGG + tig0023178:39792-39811 Msa1406020:intron 25.0%
! AGGAATTCATCATAATGAAT+CGG + tig0023178:39815-39834 Msa1406020:intron 25.0%
! TTTGAATTGCAGATATCATT+TGG + tig0023178:39988-40007 Msa1406020:intron 25.0%
! TTGAATTGCAGATATCATTT+GGG + tig0023178:39989-40008 Msa1406020:intron 25.0%
! AGAAAATAAAACTGGAAGTA+AGG - tig0023178:40151-40170 None:intergenic 25.0%
! TATGATACATTCACATCAAA+AGG - tig0023178:40401-40420 None:intergenic 25.0%
! ATTGTATATATCACATGTGT+GGG + tig0023178:40430-40449 Msa1406020:three_prime_UTR 25.0%
TTTGATCAGTTTGTAGAATC+AGG - tig0023178:33163-33182 None:intergenic 30.0%
TGGTGACAAATGATTGTTTA+TGG - tig0023178:33363-33382 None:intergenic 30.0%
AAGACCAAGAAAATTTCTCT+TGG - tig0023178:33575-33594 None:intergenic 30.0%
! TAGATAAGTGTTTTGTGTGT+AGG + tig0023178:33663-33682 Msa1406020:intron 30.0%
GAAAAACTGTAATAAATGGG+AGG + tig0023178:33696-33715 Msa1406020:intron 30.0%
! GTATGTGATGTTTTACTACT+TGG + tig0023178:33736-33755 Msa1406020:intron 30.0%
! ACATTAGTAGTCACTTTAAG+TGG - tig0023178:33775-33794 None:intergenic 30.0%
ACTACTAATGTGAAAGACAA+TGG + tig0023178:33784-33803 Msa1406020:intron 30.0%
TGAAAGACAATGGAAAACTT+AGG + tig0023178:33794-33813 Msa1406020:intron 30.0%
TTGTTTATCCAAACAATGAG+AGG + tig0023178:34054-34073 Msa1406020:intron 30.0%
! GTTACTGTAATTGGTTTATC+AGG + tig0023178:34076-34095 Msa1406020:intron 30.0%
AGGTGCTCCTTATAATAATT+TGG - tig0023178:34164-34183 None:intergenic 30.0%
AAACAGCATGCTTAATTAAC+TGG - tig0023178:34414-34433 None:intergenic 30.0%
!! AGCATGCTGTTTCAAAATTT+AGG + tig0023178:34422-34441 Msa1406020:intron 30.0%
! TATGATTTTTGTGTCCTAGT+TGG + tig0023178:34673-34692 Msa1406020:intron 30.0%
TAACTGCTAATGTCAAACAT+AGG + tig0023178:34756-34775 Msa1406020:intron 30.0%
AATTCATTTCGCTTGTAAGA+TGG - tig0023178:35300-35319 None:intergenic 30.0%
CAAGTTTCTGCAATGTATAA+AGG - tig0023178:35342-35361 None:intergenic 30.0%
AACTTAAGAGTTTACTGAGT+TGG + tig0023178:35462-35481 Msa1406020:intron 30.0%
ACTTAAGAGTTTACTGAGTT+GGG + tig0023178:35463-35482 Msa1406020:intron 30.0%
! AAAAGAACCTTTTCCTTGAA+CGG - tig0023178:35649-35668 None:intergenic 30.0%
!! AGGTTCTTTTCAAGATTTGA+AGG + tig0023178:35659-35678 Msa1406020:five_prime_UTR 30.0%
ATTACGAATGCTTTCAGATT+GGG - tig0023178:35834-35853 None:intergenic 30.0%
AATTACGAATGCTTTCAGAT+TGG - tig0023178:35835-35854 None:intergenic 30.0%
!! AATCTGAAAGCATTCGTAAT+TGG + tig0023178:35834-35853 Msa1406020:intron 30.0%
AATAACTCATTGCACTGAAA+TGG - tig0023178:35891-35910 None:intergenic 30.0%
CAATTAAGTACCTGAAGAAT+GGG - tig0023178:36061-36080 None:intergenic 30.0%
ACAATTAAGTACCTGAAGAA+TGG - tig0023178:36062-36081 None:intergenic 30.0%
! ATGTTATATATCTAGAGTGC+TGG + tig0023178:36151-36170 Msa1406020:intron 30.0%
GCTAAAGTTTCAGTTGTTAT+TGG + tig0023178:36196-36215 Msa1406020:CDS 30.0%
!! AGTTGTTATTGGCTTATTCA+AGG + tig0023178:36207-36226 Msa1406020:CDS 30.0%
AGAAAGGAGAACTAAAGATA+AGG - tig0023178:36494-36513 None:intergenic 30.0%
GCTTATTATAAATTTCTCGG+AGG + tig0023178:36514-36533 Msa1406020:CDS 30.0%
!!! TTTTTTTTGGGTACAAGAGA+GGG - tig0023178:36816-36835 None:intergenic 30.0%
!!! TTTTTTTTTGGGTACAAGAG+AGG - tig0023178:36817-36836 None:intergenic 30.0%
GTAACATAATAGAGAGAATG+AGG + tig0023178:37290-37309 Msa1406020:intron 30.0%
ATAATAATACTCCCAAGTAG+TGG + tig0023178:37637-37656 Msa1406020:intron 30.0%
!!! ATCTTGGCAGAATTTTAGTT+GGG + tig0023178:37935-37954 Msa1406020:intron 30.0%
! TTGTGAATTGAAGCATCTTT+GGG + tig0023178:37972-37991 Msa1406020:intron 30.0%
TCAAGGTCTTAGACAAAATT+GGG - tig0023178:38022-38041 None:intergenic 30.0%
TTCAAGGTCTTAGACAAAAT+TGG - tig0023178:38023-38042 None:intergenic 30.0%
!! ATTTTGTCTAAGACCTTGAA+AGG + tig0023178:38023-38042 Msa1406020:intron 30.0%
GCTTAAATTCCATCTATTAC+AGG - tig0023178:38198-38217 None:intergenic 30.0%
ATAAACTTACCTTATCTTCC+GGG - tig0023178:38281-38300 None:intergenic 30.0%
CATAAACTTACCTTATCTTC+CGG - tig0023178:38282-38301 None:intergenic 30.0%
GGAAGATAAGGTAAGTTTAT+GGG + tig0023178:38281-38300 Msa1406020:intron 30.0%
GAAGATAAGGTAAGTTTATG+GGG + tig0023178:38282-38301 Msa1406020:intron 30.0%
! ACAGTTTTTCACTTTACAAG+GGG - tig0023178:38516-38535 None:intergenic 30.0%
! GACAGTTTTTCACTTTACAA+GGG - tig0023178:38517-38536 None:intergenic 30.0%
! AGAATTGGCTTAGAAATGTA+GGG + tig0023178:38538-38557 Msa1406020:intron 30.0%
ATATGCTCATTTCATTCCTT+TGG - tig0023178:38658-38677 None:intergenic 30.0%
! TAATTTTTGTGGTTGTCGAT+AGG - tig0023178:38689-38708 None:intergenic 30.0%
CGACAACCACAAAAATTAAA+TGG + tig0023178:38691-38710 Msa1406020:intron 30.0%
TATTTGGACTGATATCAGTA+CGG - tig0023178:38751-38770 None:intergenic 30.0%
ATATCAGTCCAAATAAGTGA+AGG + tig0023178:38756-38775 Msa1406020:intron 30.0%
TCCAAATAAGTGAAGGAATT+GGG + tig0023178:38763-38782 Msa1406020:intron 30.0%
TAAACCTTTCCAAAAGAAGA+GGG + tig0023178:38878-38897 Msa1406020:intron 30.0%
TCAAACTGCATATTCTACAT+TGG - tig0023178:38965-38984 None:intergenic 30.0%
! TGAATTTAGAGTGTGACTAT+GGG + tig0023178:39045-39064 Msa1406020:intron 30.0%
AAATTCAAAGCCCATCAATT+TGG + tig0023178:39247-39266 Msa1406020:intron 30.0%
! ATTTGCTAATGTAGGCAATT+GGG + tig0023178:39458-39477 Msa1406020:intron 30.0%
GTAACATAATAGAGAGAATG+AGG + tig0023178:37290-37309 Msa1406020:intron 30.0%
ATTGATCCTTTGCCTTATAA+AGG + tig0023178:39597-39616 Msa1406020:intron 30.0%
TTGATCCTTTGCCTTATAAA+GGG + tig0023178:39598-39617 Msa1406020:intron 30.0%
TTGTAATCAGTCCCTTTATA+AGG - tig0023178:39612-39631 None:intergenic 30.0%
TATAAAGGGACTGATTACAA+CGG + tig0023178:39612-39631 Msa1406020:intron 30.0%
AATTCATCATAATGAATCGG+AGG + tig0023178:39818-39837 Msa1406020:intron 30.0%
AAGGAATCAAAAACCTTCAA+TGG - tig0023178:40132-40151 None:intergenic 30.0%
TAAATTTGTCTGAATGCTGT+AGG + tig0023178:40195-40214 Msa1406020:intron 30.0%
CATTGTATATATCACATGTG+TGG + tig0023178:40429-40448 Msa1406020:three_prime_UTR 30.0%
AAGTTACTCAAATCACATCA+GGG + tig0023178:40508-40527 Msa1406020:three_prime_UTR 30.0%
! ATCTGTTGGTGAATCTTTAG+AGG - tig0023178:33116-33135 None:intergenic 35.0%
!! TGTTGTTGATGATGCCATTT+GGG - tig0023178:33231-33250 None:intergenic 35.0%
ATGGAAGAAGAAATAATGCG+TGG - tig0023178:33344-33363 None:intergenic 35.0%
GAGTACTTACTTGGAATCTA+CGG - tig0023178:33430-33449 None:intergenic 35.0%
TGTTTATTCATCTTCTGGAC+AGG + tig0023178:33497-33516 Msa1406020:intron 35.0%
CCAAGAAAATTTCTCTTGGT+CGG - tig0023178:33571-33590 None:intergenic 35.0%
CTTATCTAATTCAATGCCTC+AGG - tig0023178:33651-33670 None:intergenic 35.0%
ACATGTTATGGAACCAATCA+AGG - tig0023178:33851-33870 None:intergenic 35.0%
TTTCAGTTCTGCACATGTTA+TGG - tig0023178:33863-33882 None:intergenic 35.0%
GTATGCAAGAGTAAGATTCT+TGG + tig0023178:33883-33902 Msa1406020:intron 35.0%
TACAGTAACCTCTCATTGTT+TGG - tig0023178:34065-34084 None:intergenic 35.0%
CAATGAGAGGTTACTGTAAT+TGG + tig0023178:34067-34086 Msa1406020:intron 35.0%
ACCACTCCAACAAAGAAAAT+GGG - tig0023178:34189-34208 None:intergenic 35.0%
TACCACTCCAACAAAGAAAA+TGG - tig0023178:34190-34209 None:intergenic 35.0%
ATGTGTTTGTGTTTGGTCAA+TGG - tig0023178:34229-34248 None:intergenic 35.0%
TTAACTGGTAAACATAGACC+AGG - tig0023178:34399-34418 None:intergenic 35.0%
AAGCTGAATGGAAGAAAGAT+TGG - tig0023178:34643-34662 None:intergenic 35.0%
AATCTTTCTTCCATTCAGCT+TGG + tig0023178:34642-34661 Msa1406020:five_prime_UTR 35.0%
! AAGCAAGATGTTTTCCAACT+AGG - tig0023178:34690-34709 None:intergenic 35.0%
TAATGTCAAACATAGGTCAG+TGG + tig0023178:34763-34782 Msa1406020:intron 35.0%
!! TTTGCAGTTGCTGATTTCAT+TGG + tig0023178:34823-34842 Msa1406020:five_prime_UTR 35.0%
! AGCTTAATTTTGTACGCTGT+CGG - tig0023178:35069-35088 None:intergenic 35.0%
ATTTGGATAAAACACTAGGG+AGG + tig0023178:35106-35125 Msa1406020:intron 35.0%
ACTACCAAGTACATACAACA+GGG - tig0023178:35154-35173 None:intergenic 35.0%
TTACAAGCGAAATGAATTGC+AGG + tig0023178:35302-35321 Msa1406020:intron 35.0%
TTAATGATACTAGAGTCCCA+CGG - tig0023178:35377-35396 None:intergenic 35.0%
AAAAGAACTCTTCATCGTCT+TGG + tig0023178:35395-35414 Msa1406020:five_prime_UTR 35.0%
AAAGAACTCTTCATCGTCTT+GGG + tig0023178:35396-35415 Msa1406020:five_prime_UTR 35.0%
CTTAAGAGTTTACTGAGTTG+GGG + tig0023178:35464-35483 Msa1406020:intron 35.0%
!! ATGCAGTTGGGTTATTTTGT+GGG + tig0023178:35498-35517 Msa1406020:intron 35.0%
AGCTTTCAGATTAGTACAGT+AGG + tig0023178:35522-35541 Msa1406020:five_prime_UTR 35.0%
GCTTTCAGATTAGTACAGTA+GGG + tig0023178:35523-35542 Msa1406020:five_prime_UTR 35.0%
CTTTCAGATTAGTACAGTAG+GGG + tig0023178:35524-35543 Msa1406020:five_prime_UTR 35.0%
TTTCAGATTAGTACAGTAGG+GGG + tig0023178:35525-35544 Msa1406020:five_prime_UTR 35.0%
!! AGTTTCTTAGAGGTGTTTCA+GGG + tig0023178:35807-35826 Msa1406020:intron 35.0%
!! TGAAAGCATTCGTAATTGGT+GGG + tig0023178:35838-35857 Msa1406020:intron 35.0%
! TAGGTTGACCTGTTATCTAT+TGG - tig0023178:36018-36037 None:intergenic 35.0%
CCTGTAGTTAGTAATGACAT+CGG + tig0023178:36310-36329 Msa1406020:intron 35.0%
TCTGACAAGAAATAGTAGCA+AGG - tig0023178:36614-36633 None:intergenic 35.0%
ATTCTACTGTCCGAATTCTA+TGG - tig0023178:36684-36703 None:intergenic 35.0%
AGAATTCGGACAGTAGAATA+TGG + tig0023178:36685-36704 Msa1406020:intron 35.0%
GAATTCGGACAGTAGAATAT+GGG + tig0023178:36686-36705 Msa1406020:intron 35.0%
!!! TTTTTTTGGGTACAAGAGAG+GGG - tig0023178:36815-36834 None:intergenic 35.0%
TGCATCAACACTAAGGAAAA+TGG - tig0023178:36849-36868 None:intergenic 35.0%
TTTAAGCTGCATCAACACTA+AGG - tig0023178:36856-36875 None:intergenic 35.0%
! GTTGGTCATGCTAAGTTTTT+AGG + tig0023178:37123-37142 Msa1406020:intron 35.0%
GTGATTCATAAGAACGAATC+AGG + tig0023178:37148-37167 Msa1406020:intron 35.0%
ATTGATCCTTTGCCTTGTAA+AGG + tig0023178:37356-37375 Msa1406020:intron 35.0%
TTGATCCTTTGCCTTGTAAA+GGG + tig0023178:37357-37376 Msa1406020:intron 35.0%
TTGTAATCAGTCCCTTTACA+AGG - tig0023178:37371-37390 None:intergenic 35.0%
TGTAAAGGGACTGATTACAA+CGG + tig0023178:37371-37390 Msa1406020:intron 35.0%
CTAAATTAGCCCACCTAAAT+TGG - tig0023178:37725-37744 None:intergenic 35.0%
!! GATCTTGGCAGAATTTTAGT+TGG + tig0023178:37934-37953 Msa1406020:intron 35.0%
! GTTGTGAATTGAAGCATCTT+TGG + tig0023178:37971-37990 Msa1406020:intron 35.0%
CAAGGTCTTAGACAAAATTG+GGG - tig0023178:38021-38040 None:intergenic 35.0%
TAAGTATTACGGTCCTTTCA+AGG - tig0023178:38039-38058 None:intergenic 35.0%
TTGAAAGGACCGTAATACTT+AGG + tig0023178:38038-38057 Msa1406020:intron 35.0%
AAACTCCTGCCTAAGTATTA+CGG - tig0023178:38050-38069 None:intergenic 35.0%
AGTGATGAGAATTTCTCTGT+TGG - tig0023178:38137-38156 None:intergenic 35.0%
TCAGAACAGAATGAAACAAC+AGG - tig0023178:38174-38193 None:intergenic 35.0%
CGGAAGATAAGGTAAGTTTA+TGG + tig0023178:38280-38299 Msa1406020:intron 35.0%
TGTCCATATACTACCTCAAA+CGG + tig0023178:38311-38330 Msa1406020:intron 35.0%
! AACCATTTGGACCAATTTTG+AGG + tig0023178:38389-38408 Msa1406020:intron 35.0%
! GGACAGTTTTTCACTTTACA+AGG - tig0023178:38518-38537 None:intergenic 35.0%
AGTGAAAAACTGTCCAGAAT+TGG + tig0023178:38523-38542 Msa1406020:intron 35.0%
CTACATTTCTAAGCCAATTC+TGG - tig0023178:38539-38558 None:intergenic 35.0%
! CAGAATTGGCTTAGAAATGT+AGG + tig0023178:38537-38556 Msa1406020:intron 35.0%
ATTAAATGGTTACCAGACGA+AGG + tig0023178:38705-38724 Msa1406020:intron 35.0%
TTAAATGGTTACCAGACGAA+GGG + tig0023178:38706-38725 Msa1406020:intron 35.0%
ATCAGTACGGACTTTATTGA+AGG - tig0023178:38738-38757 None:intergenic 35.0%
GTCCAAATAAGTGAAGGAAT+TGG + tig0023178:38762-38781 Msa1406020:intron 35.0%
TCCCAATTCCTTCACTTATT+TGG - tig0023178:38767-38786 None:intergenic 35.0%
CTAAACCTTTCCAAAAGAAG+AGG + tig0023178:38877-38896 Msa1406020:intron 35.0%
AAACCTTTCCAAAAGAAGAG+GGG + tig0023178:38879-38898 Msa1406020:intron 35.0%
GTCACACTCTAAATTCACTT+GGG - tig0023178:39042-39061 None:intergenic 35.0%
AGTCACACTCTAAATTCACT+TGG - tig0023178:39043-39062 None:intergenic 35.0%
! GTGAATTTAGAGTGTGACTA+TGG + tig0023178:39044-39063 Msa1406020:intron 35.0%
TTCAATGTCCGAAATGAGTT+CGG + tig0023178:39073-39092 Msa1406020:intron 35.0%
!! AAAGAGCATTAAGCACATTC+TGG - tig0023178:39312-39331 None:intergenic 35.0%
ATCATATGCGGTGCAAAAAT+GGG - tig0023178:39378-39397 None:intergenic 35.0%
TATCATATGCGGTGCAAAAA+TGG - tig0023178:39379-39398 None:intergenic 35.0%
!! ACCCAAAGATTTGCTAATGT+AGG + tig0023178:39450-39469 Msa1406020:intron 35.0%
GCCTACATTAGCAAATCTTT+GGG - tig0023178:39454-39473 None:intergenic 35.0%
TGCCTACATTAGCAAATCTT+TGG - tig0023178:39455-39474 None:intergenic 35.0%
!! GATTTGCTAATGTAGGCAAT+TGG + tig0023178:39457-39476 Msa1406020:intron 35.0%
ATCTTCTGAACTCAACGAAT+AGG - tig0023178:37267-37286 None:intergenic 35.0%
TCCATAACAGATACACACTA+GGG + tig0023178:39858-39877 Msa1406020:intron 35.0%
! TTGCAAGACATTGATAACCA+CGG + tig0023178:39930-39949 Msa1406020:intron 35.0%
! GAACCTTTTTCTCCTTTTTG+CGG + tig0023178:40266-40285 Msa1406020:CDS 35.0%
CTGATGTGATTTGAGTAACT+TGG - tig0023178:40509-40528 None:intergenic 35.0%
CAAGTTACTCAAATCACATC+AGG + tig0023178:40507-40526 Msa1406020:three_prime_UTR 35.0%
!! CATGGCTGTTTGTTATCTGT+TGG - tig0023178:33130-33149 None:intergenic 40.0%
AGTTTGTAGAATCAGGAGTG+AGG - tig0023178:33156-33175 None:intergenic 40.0%
!! GTTGTTGATGATGCCATTTG+GGG - tig0023178:33230-33249 None:intergenic 40.0%
!! GTGTTGTTGATGATGCCATT+TGG - tig0023178:33232-33251 None:intergenic 40.0%
CCAGTTTCTGAGTACTTACT+TGG - tig0023178:33439-33458 None:intergenic 40.0%
CCAAGTAAGTACTCAGAAAC+TGG + tig0023178:33436-33455 Msa1406020:intron 40.0%
! CCGACCAAGAGAAATTTTCT+TGG + tig0023178:33568-33587 Msa1406020:five_prime_UTR 40.0%
!! CCTTGAGTTGAGAATGTACT+GGG + tig0023178:34106-34125 Msa1406020:intron 40.0%
!! CTTGAGTTGAGAATGTACTG+GGG + tig0023178:34107-34126 Msa1406020:intron 40.0%
! ACCTTGCCCATTTTCTTTGT+TGG + tig0023178:34180-34199 Msa1406020:intron 40.0%
TCCAACAAAGAAAATGGGCA+AGG - tig0023178:34184-34203 None:intergenic 40.0%
!! AATACTTTGCTTCTAGAGCG+AGG + tig0023178:34264-34283 Msa1406020:intron 40.0%
!! ATACTTTGCTTCTAGAGCGA+GGG + tig0023178:34265-34284 Msa1406020:intron 40.0%
!! CTTTGAAATGTATGAGCTCC+TGG + tig0023178:34378-34397 Msa1406020:intron 40.0%
!! TAGGTTTGTTTTCCCTGCAT+TGG + tig0023178:34441-34460 Msa1406020:intron 40.0%
!! AGGTTTGTTTTCCCTGCATT+GGG + tig0023178:34442-34461 Msa1406020:intron 40.0%
!! TATGATATTGGTGCCACATC+CGG + tig0023178:34481-34500 Msa1406020:five_prime_UTR 40.0%
CACTACCAAGTACATACAAC+AGG - tig0023178:35155-35174 None:intergenic 40.0%
! CTGCTTTATGGACTTGGTAT+AGG + tig0023178:35222-35241 Msa1406020:five_prime_UTR 40.0%
! TTATGGACTTGGTATAGGTC+TGG + tig0023178:35227-35246 Msa1406020:five_prime_UTR 40.0%
AATGAATTGCAGGCTATGCA+TGG + tig0023178:35312-35331 Msa1406020:intron 40.0%
AAGAACTCTTCATCGTCTTG+GGG + tig0023178:35397-35416 Msa1406020:five_prime_UTR 40.0%
GACTGAACTATCATGCAGTT+GGG + tig0023178:35486-35505 Msa1406020:intron 40.0%
!! CATGCAGTTGGGTTATTTTG+TGG + tig0023178:35497-35516 Msa1406020:intron 40.0%
GAAAAGGCAATTGTTTCCCT+GGG + tig0023178:35681-35700 Msa1406020:five_prime_UTR 40.0%
TCAGATTCTTTGTCACCAAG+TGG - tig0023178:35723-35742 None:intergenic 40.0%
!! GAGTTTCTTAGAGGTGTTTC+AGG + tig0023178:35806-35825 Msa1406020:intron 40.0%
!! CTGAAAGCATTCGTAATTGG+TGG + tig0023178:35837-35856 Msa1406020:intron 40.0%
!! GAAAGCATTCGTAATTGGTG+GGG + tig0023178:35839-35858 Msa1406020:intron 40.0%
! AAAGCATTCGTAATTGGTGG+GGG + tig0023178:35840-35859 Msa1406020:intron 40.0%
! GGGGCTAGTATTATTTCAAC+AGG + tig0023178:35860-35879 Msa1406020:CDS 40.0%
CCTGCATAATACAGAACACT+AGG - tig0023178:36037-36056 None:intergenic 40.0%
CCTAGTGTTCTGTATTATGC+AGG + tig0023178:36034-36053 Msa1406020:CDS 40.0%
CCGATGTCATTACTAACTAC+AGG - tig0023178:36313-36332 None:intergenic 40.0%
TGTCCTAAAAGTGGACGATT+TGG + tig0023178:36337-36356 Msa1406020:CDS 40.0%
GTCCTAAAAGTGGACGATTT+GGG + tig0023178:36338-36357 Msa1406020:CDS 40.0%
TCCTAAAAGTGGACGATTTG+GGG + tig0023178:36339-36358 Msa1406020:CDS 40.0%
ATGACCAGAAAACCATTACC+TGG - tig0023178:36588-36607 None:intergenic 40.0%
!! GGTAATGGTTTTCTGGTCAT+TGG + tig0023178:36588-36607 Msa1406020:intron 40.0%
GAGTAGAGAGGTCTTTCAAT+CGG - tig0023178:36724-36743 None:intergenic 40.0%
ACCTCTCTACTCCTCAAAAA+GGG + tig0023178:36732-36751 Msa1406020:intron 40.0%
AAGGGTTCCTGATTAAGAAG+TGG - tig0023178:37231-37250 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG - tig0023178:37403-37422 None:intergenic 40.0%
!! TTTCCTACTTTTCACCCTTG+AGG - tig0023178:37602-37621 None:intergenic 40.0%
GAAAAGTAGGAAAACGTTGC+AGG + tig0023178:37609-37628 Msa1406020:intron 40.0%
ATACTCCCAAGTAGTGGTAT+AGG + tig0023178:37643-37662 Msa1406020:intron 40.0%
! ATTCTCTCTGGTGCCAATTT+AGG + tig0023178:37709-37728 Msa1406020:intron 40.0%
GAAAGATACTCCACCTGAAA+TGG - tig0023178:37784-37803 None:intergenic 40.0%
AATTGCTGCTACCAAAGTTC+TGG - tig0023178:37814-37833 None:intergenic 40.0%
! GTGCATTTTAGACAGGAAGA+TGG - tig0023178:37850-37869 None:intergenic 40.0%
! CTTCCTGTCTAAAATGCACT+CGG + tig0023178:37851-37870 Msa1406020:intron 40.0%
! TTCCTGTCTAAAATGCACTC+GGG + tig0023178:37852-37871 Msa1406020:intron 40.0%
! TTATGGACTGTTGCTGTGTT+GGG + tig0023178:37912-37931 Msa1406020:intron 40.0%
! TGTTCTGAGCCTGTAATAGA+TGG + tig0023178:38186-38205 Msa1406020:intron 40.0%
GGGTGAATCAACGAATATGA+GGG - tig0023178:38261-38280 None:intergenic 40.0%
!! CTCATATTCGTTGATTCACC+CGG + tig0023178:38260-38279 Msa1406020:intron 40.0%
TAAGGTAAGTTTATGGGGAG+AGG + tig0023178:38287-38306 Msa1406020:intron 40.0%
! ACTCCGTTTGAGGTAGTATA+TGG - tig0023178:38317-38336 None:intergenic 40.0%
ATATACTACCTCAAACGGAG+TGG + tig0023178:38316-38335 Msa1406020:intron 40.0%
AATTCAATCCACTCCGTTTG+AGG - tig0023178:38327-38346 None:intergenic 40.0%
! AATGGTTATCACTGGCTGAA+TGG - tig0023178:38376-38395 None:intergenic 40.0%
TTCAGCCAGTGATAACCATT+TGG + tig0023178:38376-38395 Msa1406020:intron 40.0%
TTGGTCCAAATGGTTATCAC+TGG - tig0023178:38384-38403 None:intergenic 40.0%
AGCCTCAAAATTGGTCCAAA+TGG - tig0023178:38394-38413 None:intergenic 40.0%
CTTATCTTCGATGCTGTGTT+CGG - tig0023178:38420-38439 None:intergenic 40.0%
! GTTTTTCACTTTACAAGGGG+TGG - tig0023178:38513-38532 None:intergenic 40.0%
TAAATGGTTACCAGACGAAG+GGG + tig0023178:38707-38726 Msa1406020:intron 40.0%
ATAAGTGAAGGAATTGGGAG+TGG + tig0023178:38768-38787 Msa1406020:intron 40.0%
! GAATTAAGCCCCTCTTCTTT+TGG - tig0023178:38890-38909 None:intergenic 40.0%
CAGTAATATCTCGACCAGAA+TGG + tig0023178:38916-38935 Msa1406020:intron 40.0%
TCTAAATTCACTTGGGTACG+AGG - tig0023178:39035-39054 None:intergenic 40.0%
GTCCATAACCGAACTCATTT+CGG - tig0023178:39084-39103 None:intergenic 40.0%
GAAATGAGTTCGGTTATGGA+CGG + tig0023178:39083-39102 Msa1406020:intron 40.0%
!! GCTCTTTTGATCAGCTTTGA+TGG + tig0023178:39325-39344 Msa1406020:intron 40.0%
TCATATGCGGTGCAAAAATG+GGG - tig0023178:39377-39396 None:intergenic 40.0%
GTGTTTGTCTTGCATCAAGA+CGG + tig0023178:39480-39499 Msa1406020:intron 40.0%
TCAGTCCCTTTATAAGGCAA+AGG - tig0023178:39606-39625 None:intergenic 40.0%
GTCAAATGAAGAGGTCATGA+TGG - tig0023178:37403-37422 None:intergenic 40.0%
TGTTGAGCTGTCAAATGAAG+AGG - tig0023178:39653-39672 None:intergenic 40.0%
ACTATCACATAGTGAATCGG+AGG + tig0023178:39795-39814 Msa1406020:intron 40.0%
ATCATAATGAATCGGAGGTC+AGG + tig0023178:39823-39842 Msa1406020:intron 40.0%
GTCCATAACAGATACACACT+AGG + tig0023178:39857-39876 Msa1406020:intron 40.0%
TCCCTAGTGTGTATCTGTTA+TGG - tig0023178:39862-39881 None:intergenic 40.0%
TACGGTAATACTTTAAGCCG+TGG - tig0023178:39950-39969 None:intergenic 40.0%
TATCATTTGGGCCGATAAGT+TGG + tig0023178:40001-40020 Msa1406020:CDS 40.0%
GATACCATCAGCCAACTTAT+CGG - tig0023178:40015-40034 None:intergenic 40.0%
TGCAAAGGTAACAACAGCAT+TGG - tig0023178:40103-40122 None:intergenic 40.0%
CTTCAATGGTGAGAATGCAA+AGG - tig0023178:40118-40137 None:intergenic 40.0%
CTTTGCATTCTCACCATTGA+AGG + tig0023178:40116-40135 Msa1406020:CDS 40.0%
CACAAGTGACACTAATGCAA+TGG - tig0023178:40292-40311 None:intergenic 40.0%
!! CTGCTGTCACTTCAAGATTT+TGG - tig0023178:40370-40389 None:intergenic 40.0%
GAATCAGGAGTGAGGAATCA+TGG - tig0023178:33148-33167 None:intergenic 45.0%
CTTATTCTTGCTGCCCCAAA+TGG + tig0023178:33214-33233 Msa1406020:five_prime_UTR 45.0%
AGTGGATAAGTGACACGTGT+TGG - tig0023178:33383-33402 None:intergenic 45.0%
ACGGTTATGAGAAGAGTGAG+CGG - tig0023178:33411-33430 None:intergenic 45.0%
!! GCCTTGAGTTGAGAATGTAC+TGG + tig0023178:34105-34124 Msa1406020:intron 45.0%
CCCAGTACATTCTCAACTCA+AGG - tig0023178:34109-34128 None:intergenic 45.0%
! GCCCATTTTCTTTGTTGGAG+TGG + tig0023178:34185-34204 Msa1406020:intron 45.0%
!! TTTGTTTTCCCTGCATTGGG+TGG + tig0023178:34445-34464 Msa1406020:five_prime_UTR 45.0%
! TGAAATTGTAGCACCGGATG+TGG - tig0023178:34497-34516 None:intergenic 45.0%
CTGCAGTGAAATTGTAGCAC+CGG - tig0023178:34503-34522 None:intergenic 45.0%
!! TTCCATTCAGCTTGGTCTTG+TGG + tig0023178:34650-34669 Msa1406020:five_prime_UTR 45.0%
TACCACAAGACCAAGCTGAA+TGG - tig0023178:34655-34674 None:intergenic 45.0%
GTAGTTCAGTTTCTGCCTTC+TGG - tig0023178:34874-34893 None:intergenic 45.0%
GCTAAGAGAACACCAAGTTC+TGG - tig0023178:35195-35214 None:intergenic 45.0%
!! GAACTTGGTGTTCTCTTAGC+AGG + tig0023178:35195-35214 Msa1406020:five_prime_UTR 45.0%
! TTGGTGTTCTCTTAGCAGGA+AGG + tig0023178:35199-35218 Msa1406020:five_prime_UTR 45.0%
! TTAGCAGGAAGGCTGCTTTA+TGG + tig0023178:35210-35229 Msa1406020:five_prime_UTR 45.0%
ACTTGTCCATCACAAATCCG+TGG + tig0023178:35357-35376 Msa1406020:five_prime_UTR 45.0%
CTTGTCCATCACAAATCCGT+GGG + tig0023178:35358-35377 Msa1406020:five_prime_UTR 45.0%
GGACTGAACTATCATGCAGT+TGG + tig0023178:35485-35504 Msa1406020:intron 45.0%
AGATTAGTACAGTAGGGGGA+TGG + tig0023178:35529-35548 Msa1406020:five_prime_UTR 45.0%
!! TGCTCCACTTGCTGTGTTAA+TGG + tig0023178:35572-35591 Msa1406020:five_prime_UTR 45.0%
!! GCTCCACTTGCTGTGTTAAT+GGG + tig0023178:35573-35592 Msa1406020:five_prime_UTR 45.0%
AGTCCCATTAACACAGCAAG+TGG - tig0023178:35579-35598 None:intergenic 45.0%
! CTTGCTGTGTTAATGGGACT+CGG + tig0023178:35579-35598 Msa1406020:five_prime_UTR 45.0%
TTGCTTCTCAAAGCCGTTCA+AGG + tig0023178:35633-35652 Msa1406020:five_prime_UTR 45.0%
CTCAAAGCCGTTCAAGGAAA+AGG + tig0023178:35639-35658 Msa1406020:five_prime_UTR 45.0%
GGAAAAGGCAATTGTTTCCC+TGG + tig0023178:35680-35699 Msa1406020:five_prime_UTR 45.0%
TTGTTTCCCTGGGCAAACTA+AGG + tig0023178:35691-35710 Msa1406020:five_prime_UTR 45.0%
TGTTTCCCTGGGCAAACTAA+GGG + tig0023178:35692-35711 Msa1406020:five_prime_UTR 45.0%
ATTCTTTGTCACCAAGTGGC+CGG - tig0023178:35719-35738 None:intergenic 45.0%
GAAGTCTGCCTATGAAGATC+AGG + tig0023178:35773-35792 Msa1406020:exon 45.0%
CTCGGATTCCTGATCTTCAT+AGG - tig0023178:35784-35803 None:intergenic 45.0%
CTATGAAGATCAGGAATCCG+AGG + tig0023178:35782-35801 Msa1406020:exon 45.0%
AAGCATTCGTAATTGGTGGG+GGG + tig0023178:35841-35860 Msa1406020:intron 45.0%
TTATGCAGGTCCCATTCTTC+AGG + tig0023178:36048-36067 Msa1406020:CDS 45.0%
ATCGGTTGCTGTCCTAAAAG+TGG + tig0023178:36328-36347 Msa1406020:CDS 45.0%
!! TCCCCAAATCGTCCACTTTT+AGG - tig0023178:36343-36362 None:intergenic 45.0%
! TCTTTACGTTGGTTGCTACC+AGG + tig0023178:36567-36586 Msa1406020:CDS 45.0%
!! GCTACCAGGTAATGGTTTTC+TGG + tig0023178:36581-36600 Msa1406020:intron 45.0%
GACCTCTCTACTCCTCAAAA+AGG + tig0023178:36731-36750 Msa1406020:intron 45.0%
!! TCCCTTTTTGAGGAGTAGAG+AGG - tig0023178:36736-36755 None:intergenic 45.0%
TCAGTCCCTTTACAAGGCAA+AGG - tig0023178:37365-37384 None:intergenic 45.0%
AAGGGACTGATTACAACGGT+TGG + tig0023178:37375-37394 Msa1406020:intron 45.0%
TGTCGAGCTGTCAAATGAAG+AGG - tig0023178:37412-37431 None:intergenic 45.0%
!! AAGGGTGCTCTTTAAGGAGA+GGG - tig0023178:37577-37596 None:intergenic 45.0%
! CTTTTCACCCTTGAGGTCAA+GGG - tig0023178:37595-37614 None:intergenic 45.0%
! ACTTTTCACCCTTGAGGTCA+AGG - tig0023178:37596-37615 None:intergenic 45.0%
TGACCTCAAGGGTGAAAAGT+AGG + tig0023178:37596-37615 Msa1406020:intron 45.0%
CCAAGCCTATACCACTACTT+GGG - tig0023178:37651-37670 None:intergenic 45.0%
CCAAGTAGTGGTATAGGCTT+GGG + tig0023178:37649-37668 Msa1406020:intron 45.0%
! TCTCTGGTGCCAATTTAGGT+GGG + tig0023178:37713-37732 Msa1406020:intron 45.0%
AACTCCCAAGTAGCCATTTC+AGG + tig0023178:37768-37787 Msa1406020:intron 45.0%
TCCACCTGAAATGGCTACTT+GGG - tig0023178:37775-37794 None:intergenic 45.0%
TTTCCACTGGACCAGAACTT+TGG + tig0023178:37800-37819 Msa1406020:intron 45.0%
! TCCTGTCTAAAATGCACTCG+GGG + tig0023178:37853-37872 Msa1406020:intron 45.0%
AGCAACAGTCCATAACATCC+CGG - tig0023178:37907-37926 None:intergenic 45.0%
! GTTATGGACTGTTGCTGTGT+TGG + tig0023178:37911-37930 Msa1406020:intron 45.0%
CATCTTTGGGTAGCTCCAAT+TGG + tig0023178:37985-38004 Msa1406020:intron 45.0%
AAGGACCGTAATACTTAGGC+AGG + tig0023178:38042-38061 Msa1406020:intron 45.0%
TCCTCAAGTTACACCCTTAC+AGG - tig0023178:38103-38122 None:intergenic 45.0%
CGGGTGAATCAACGAATATG+AGG - tig0023178:38262-38281 None:intergenic 45.0%
! GTTGATTCACCCGGAAGATA+AGG + tig0023178:38269-38288 Msa1406020:intron 45.0%
GTTCGGAGAAGCCTCAAAAT+TGG - tig0023178:38403-38422 None:intergenic 45.0%
CTTATCACCCTCAAACCGAT+GGG - tig0023178:38472-38491 None:intergenic 45.0%
GGCTTAGAAATGTAGGGTCA+CGG + tig0023178:38544-38563 Msa1406020:intron 45.0%
CGGTCACTGGTGATTGAATT+AGG + tig0023178:38564-38583 Msa1406020:intron 45.0%
! GGATGTGGCACAAGTTTTCT+TGG - tig0023178:38616-38635 None:intergenic 45.0%
CCACATCCAATGCCGAATAA+GGG + tig0023178:38628-38647 Msa1406020:intron 45.0%
! TCCTTTGGCTCACCCTTATT+CGG - tig0023178:38643-38662 None:intergenic 45.0%
GGAGTGGTTGAAGTAAACCA+GGG + tig0023178:38784-38803 Msa1406020:intron 45.0%
GAGTGGTTGAAGTAAACCAG+GGG + tig0023178:38785-38804 Msa1406020:intron 45.0%
!! AAGCCCCTCTTCTTTTGGAA+AGG - tig0023178:38885-38904 None:intergenic 45.0%
CGAGGTGAACTCAGAAGAAA+AGG - tig0023178:39017-39036 None:intergenic 45.0%
GTCCGAAATGAGTTCGGTTA+TGG + tig0023178:39079-39098 Msa1406020:intron 45.0%
GCTTGGGTGTCCAAATTGAT+GGG - tig0023178:39260-39279 None:intergenic 45.0%
GTTGAACACTCCCTTTCAAC+AGG - tig0023178:39282-39301 None:intergenic 45.0%
!! ACAGATAGAGCTTGTTGTCG+TGG + tig0023178:39427-39446 Msa1406020:intron 45.0%
AGTGCGAAGTGGGAAGATTT+CGG - tig0023178:40037-40056 None:intergenic 45.0%
TCTGTGTTGAATTCCACTGC+AGG + tig0023178:40227-40246 Msa1406020:intron 45.0%
!! ATTCCACTGCAGGAGTATCT+TGG + tig0023178:40237-40256 Msa1406020:intron 45.0%
TGGCCGCAAAAAGGAGAAAA+AGG - tig0023178:40272-40291 None:intergenic 45.0%
CTAATGCAATGGCCGCAAAA+AGG - tig0023178:40281-40300 None:intergenic 45.0%
ACTTCTGTCCCAGAGACAAA+AGG + tig0023178:40321-40340 Msa1406020:CDS 45.0%
! AGCTCAAGCCTTTTGTCTCT+GGG - tig0023178:40332-40351 None:intergenic 45.0%
! AAGCTCAAGCCTTTTGTCTC+TGG - tig0023178:40333-40352 None:intergenic 45.0%
!!! TTTATTTTAATGTATTAATT+TGG + tig0023178:35089-35108 Msa1406020:intron 5.0%
!!! TAATAAGTTATTTTTATAAA+AGG + tig0023178:39560-39579 Msa1406020:intron 5.0%
!!! AATAAGTTATTTTTATAAAA+GGG + tig0023178:39561-39580 Msa1406020:intron 5.0%
GAAGAGTGAGCGGTAAGAAG+TGG - tig0023178:33401-33420 None:intergenic 50.0%
!! AAGCGCAGGAGTATTCTGCT+GGG + tig0023178:33523-33542 Msa1406020:five_prime_UTR 50.0%
ATAGCAAGCCACCCAATGCA+GGG - tig0023178:34456-34475 None:intergenic 50.0%
AATAGCAAGCCACCCAATGC+AGG - tig0023178:34457-34476 None:intergenic 50.0%
!! GCATTGGGTGGCTTGCTATT+TGG + tig0023178:34457-34476 Msa1406020:five_prime_UTR 50.0%
!! CGGTGCTACAATTTCACTGC+AGG + tig0023178:34501-34520 Msa1406020:five_prime_UTR 50.0%
TCACAGTCACCTGAGCTTAG+CGG + tig0023178:34606-34625 Msa1406020:intron 50.0%
TAGGTCAGTGGTTCCCTCTA+TGG + tig0023178:34775-34794 Msa1406020:intron 50.0%
AGGTCAGTGGTTCCCTCTAT+GGG + tig0023178:34776-34795 Msa1406020:intron 50.0%
GCAGCCCTGTTGTATGTACT+TGG + tig0023178:35147-35166 Msa1406020:five_prime_UTR 50.0%
! AACACCAAGTTCTGGTGCTG+TGG - tig0023178:35187-35206 None:intergenic 50.0%
! GGAAGGCTGCTTTATGGACT+TGG + tig0023178:35216-35235 Msa1406020:five_prime_UTR 50.0%
AGAGTCCCACGGATTTGTGA+TGG - tig0023178:35366-35385 None:intergenic 50.0%
CTTCATCGTCTTGGGGATTC+TGG + tig0023178:35404-35423 Msa1406020:five_prime_UTR 50.0%
TTAGTACAGTAGGGGGATGG+AGG + tig0023178:35532-35551 Msa1406020:five_prime_UTR 50.0%
AAGCAACCACCGAGGAGATT+CGG - tig0023178:35619-35638 None:intergenic 50.0%
GTTTCCCTGGGCAAACTAAG+GGG + tig0023178:35693-35712 Msa1406020:five_prime_UTR 50.0%
AGGCAGACTTCAACGAGACA+AGG - tig0023178:35764-35783 None:intergenic 50.0%
ATCCGAGGCGAGTTTCTTAG+AGG + tig0023178:35797-35816 Msa1406020:intron 50.0%
! CACCTCTAAGAAACTCGCCT+CGG - tig0023178:35802-35821 None:intergenic 50.0%
! ATTTTCTGCTGCAGCTGACG+CGG + tig0023178:36174-36193 Msa1406020:CDS 50.0%
! AGAAGACCTCTGCTGATTGG+AGG + tig0023178:36362-36381 Msa1406020:CDS 50.0%
! GGCTGCCAATTGTTGCTGTT+GGG + tig0023178:36536-36555 Msa1406020:CDS 50.0%
! GCTGCCAATTGTTGCTGTTG+GGG + tig0023178:36537-36556 Msa1406020:CDS 50.0%
AACGCCCCAACAGCAACAAT+TGG - tig0023178:36544-36563 None:intergenic 50.0%
! CGTTGGTTGCTACCAGGTAA+TGG + tig0023178:36573-36592 Msa1406020:intron 50.0%
! TGCTAGGCTCTCCCTTTTTG+AGG - tig0023178:36746-36765 None:intergenic 50.0%
GGGTACAAGAGAGGGGAAAA+TGG - tig0023178:36808-36827 None:intergenic 50.0%
!! CAAGGGTGCTCTTTAAGGAG+AGG - tig0023178:37578-37597 None:intergenic 50.0%
!! GAGGTCAAGGGTGCTCTTTA+AGG - tig0023178:37583-37602 None:intergenic 50.0%
!! AAAGAGCACCCTTGACCTCA+AGG + tig0023178:37584-37603 Msa1406020:intron 50.0%
!! AAGAGCACCCTTGACCTCAA+GGG + tig0023178:37585-37604 Msa1406020:intron 50.0%
CCCAAGTAGTGGTATAGGCT+TGG + tig0023178:37648-37667 Msa1406020:intron 50.0%
CCCAAGCCTATACCACTACT+TGG - tig0023178:37652-37671 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG - tig0023178:37693-37712 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCTC+TGG + tig0023178:37697-37716 Msa1406020:intron 50.0%
! CTCTCTGGTGCCAATTTAGG+TGG + tig0023178:37712-37731 Msa1406020:intron 50.0%
TCCCAAGTAGCCATTTCAGG+TGG + tig0023178:37771-37790 Msa1406020:intron 50.0%
CTCCACCTGAAATGGCTACT+TGG - tig0023178:37776-37795 None:intergenic 50.0%
! CAGGTGGAGTATCTTTCCAC+TGG + tig0023178:37787-37806 Msa1406020:intron 50.0%
! CTACCAAAGTTCTGGTCCAG+TGG - tig0023178:37806-37825 None:intergenic 50.0%
GACAGGAAGATGGTCAAGAG+AGG - tig0023178:37840-37859 None:intergenic 50.0%
! TCCCCGAGTGCATTTTAGAC+AGG - tig0023178:37857-37876 None:intergenic 50.0%
ACATGAACCCCGGGATGTTA+TGG + tig0023178:37895-37914 Msa1406020:intron 50.0%
CAACAGTCCATAACATCCCG+GGG - tig0023178:37905-37924 None:intergenic 50.0%
GCAACAGTCCATAACATCCC+GGG - tig0023178:37906-37925 None:intergenic 50.0%
CTGTTGCTGTGTTGGGATCT+TGG + tig0023178:37919-37938 Msa1406020:intron 50.0%
! GCCTGTAAGGGTGTAACTTG+AGG + tig0023178:38099-38118 Msa1406020:intron 50.0%
! GGTTATCACTGGCTGAATGG+TGG - tig0023178:38373-38392 None:intergenic 50.0%
TTCACACTCTGTCTGCCCAT+CGG + tig0023178:38454-38473 Msa1406020:intron 50.0%
GCTTATCACCCTCAAACCGA+TGG - tig0023178:38473-38492 None:intergenic 50.0%
AAATGTAGGGTCACGGTCAC+TGG + tig0023178:38551-38570 Msa1406020:intron 50.0%
GCCACATCCAATGCCGAATA+AGG + tig0023178:38627-38646 Msa1406020:intron 50.0%
! CCCTTATTCGGCATTGGATG+TGG - tig0023178:38631-38650 None:intergenic 50.0%
GGGAGTGGTTGAAGTAAACC+AGG + tig0023178:38783-38802 Msa1406020:intron 50.0%
CTTCATTCTTCAGCAGCTGG+AGG - tig0023178:38942-38961 None:intergenic 50.0%
TGGCTTCATTCTTCAGCAGC+TGG - tig0023178:38945-38964 None:intergenic 50.0%
! AAAGGACGGTGCTGAACTCA+TGG - tig0023178:39174-39193 None:intergenic 50.0%
GATGCCTTGTCTCGAAAGGA+CGG - tig0023178:39188-39207 None:intergenic 50.0%
AGCTGATGCCTTGTCTCGAA+AGG - tig0023178:39192-39211 None:intergenic 50.0%
GGCTTGGGTGTCCAAATTGA+TGG - tig0023178:39261-39280 None:intergenic 50.0%
GACACCCAAGCCTGTTGAAA+GGG + tig0023178:39269-39288 Msa1406020:intron 50.0%
CACTCCCTTTCAACAGGCTT+GGG - tig0023178:39276-39295 None:intergenic 50.0%
ACACTCCCTTTCAACAGGCT+TGG - tig0023178:39277-39296 None:intergenic 50.0%
ATCTTCCCACTTCGCACTAG+AGG + tig0023178:40039-40058 Msa1406020:CDS 50.0%
! TAGAGGACGGGGGATTAGTA+TGG + tig0023178:40056-40075 Msa1406020:CDS 50.0%
!! AACAGCATTGGCAGCGAAGT+TGG - tig0023178:40091-40110 None:intergenic 50.0%
TTCTGGACAGGTTCAAGCGC+AGG + tig0023178:33509-33528 Msa1406020:intron 55.0%
!! CAAGCGCAGGAGTATTCTGC+TGG + tig0023178:33522-33541 Msa1406020:five_prime_UTR 55.0%
GGTCAGTGGTTCCCTCTATG+GGG + tig0023178:34777-34796 Msa1406020:intron 55.0%
TCCCTCTATGGGGCTCTTCT+TGG + tig0023178:34787-34806 Msa1406020:five_prime_UTR 55.0%
GCCAAGAAGAGCCCCATAGA+GGG - tig0023178:34791-34810 None:intergenic 55.0%
AGCCAAGAAGAGCCCCATAG+AGG - tig0023178:34792-34811 None:intergenic 55.0%
GGGAGGAAGCGACAACTCAT+CGG + tig0023178:35123-35142 Msa1406020:intron 55.0%
ACTGCCACAGCACCAGAACT+TGG + tig0023178:35180-35199 Msa1406020:five_prime_UTR 55.0%
GGGGGATGGAGGTTCATGTA+TGG + tig0023178:35543-35562 Msa1406020:five_prime_UTR 55.0%
AGCAACCACCGAGGAGATTC+GGG - tig0023178:35618-35637 None:intergenic 55.0%
!! GCTTTGAGAAGCAACCACCG+AGG - tig0023178:35627-35646 None:intergenic 55.0%
GGGAGAAGACCTCTGCTGAT+TGG + tig0023178:36359-36378 Msa1406020:CDS 55.0%
CTGACACCTCCAATCAGCAG+AGG - tig0023178:36371-36390 None:intergenic 55.0%
!! CTGCTGATTGGAGGTGTCAG+TGG + tig0023178:36371-36390 Msa1406020:CDS 55.0%
!! GGAGGTGTCAGTGGCATTGT+AGG + tig0023178:36380-36399 Msa1406020:intron 55.0%
GGGCTGCCAATTGTTGCTGT+TGG + tig0023178:36535-36554 Msa1406020:CDS 55.0%
!! GGGGCGTTGCTTCTTTACGT+TGG + tig0023178:36556-36575 Msa1406020:CDS 55.0%
AGTGGTATAGGCTTGGGACC+TGG + tig0023178:37655-37674 Msa1406020:intron 55.0%
GTGGTATAGGCTTGGGACCT+GGG + tig0023178:37656-37675 Msa1406020:intron 55.0%
TCGAACCTGAGACCTTGAGG+AGG - tig0023178:37690-37709 None:intergenic 55.0%
TGGGGCTGCAGCTTACCAAT+TGG - tig0023178:38003-38022 None:intergenic 55.0%
GTGAAAGTGAGCCTTGCGCA+AGG + tig0023178:38070-38089 Msa1406020:intron 55.0%
!! TCTGTCTGCCCATCGGTTTG+AGG + tig0023178:38461-38480 Msa1406020:intron 55.0%
!! CTGTCTGCCCATCGGTTTGA+GGG + tig0023178:38462-38481 Msa1406020:intron 55.0%
GGCTCACCCTTATTCGGCAT+TGG - tig0023178:38637-38656 None:intergenic 55.0%
GCCGAATAAGGGTGAGCCAA+AGG + tig0023178:38639-38658 Msa1406020:intron 55.0%
GAAGGATTGTCCCCTTCGTC+TGG - tig0023178:38720-38739 None:intergenic 55.0%
CCTGATTTAGCTGCATCCCC+TGG - tig0023178:38804-38823 None:intergenic 55.0%
CCAGGGGATGCAGCTAAATC+AGG + tig0023178:38801-38820 Msa1406020:intron 55.0%
AGCACCGTCCTTTCGAGACA+AGG + tig0023178:39181-39200 Msa1406020:intron 55.0%
! CAAGGCATCAGCTGCAGTCT+TGG + tig0023178:39199-39218 Msa1406020:intron 55.0%
GGACACCCAAGCCTGTTGAA+AGG + tig0023178:39268-39287 Msa1406020:intron 55.0%
! TGGGCCGATAAGTTGGCTGA+TGG + tig0023178:40008-40027 Msa1406020:CDS 55.0%
TCCCACTTCGCACTAGAGGA+CGG + tig0023178:40043-40062 Msa1406020:CDS 55.0%
GCTCCAAGATACTCCTGCAG+TGG - tig0023178:40243-40262 None:intergenic 55.0%
CAAGCGACACCGCTAAGCTC+AGG - tig0023178:34618-34637 None:intergenic 60.0%
!! CTGAGCTTAGCGGTGTCGCT+TGG + tig0023178:34616-34635 Msa1406020:five_prime_UTR 60.0%
CGACTCTCCCCGAATCTCCT+CGG + tig0023178:35607-35626 Msa1406020:five_prime_UTR 60.0%
GCAACCACCGAGGAGATTCG+GGG - tig0023178:35617-35636 None:intergenic 60.0%
AAACTAAGGGGCCGGCCACT+TGG + tig0023178:35705-35724 Msa1406020:five_prime_UTR 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - tig0023178:37676-37695 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + tig0023178:37675-37694 Msa1406020:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + tig0023178:37682-37701 Msa1406020:intron 60.0%
GGTGGCTGAGACATGAACCC+CGG + tig0023178:37885-37904 Msa1406020:intron 60.0%
GTGGCTGAGACATGAACCCC+GGG + tig0023178:37886-37905 Msa1406020:intron 60.0%
TCAGCAGCTGGAGGCCATTC+TGG - tig0023178:38933-38952 None:intergenic 60.0%
CCCGTCCTCTAGTGCGAAGT+GGG - tig0023178:40047-40066 None:intergenic 60.0%
CCCACTTCGCACTAGAGGAC+GGG + tig0023178:40044-40063 Msa1406020:CDS 60.0%
CCACTTCGCACTAGAGGACG+GGG + tig0023178:40045-40064 Msa1406020:CDS 60.0%
CACTTCGCACTAGAGGACGG+GGG + tig0023178:40046-40065 Msa1406020:CDS 60.0%
CTCTCCCCGAATCTCCTCGG+TGG + tig0023178:35610-35629 Msa1406020:five_prime_UTR 65.0%
!! CCGGCCCCTTAGTTTGCCCA+GGG - tig0023178:35700-35719 None:intergenic 65.0%
CCCTGGGCAAACTAAGGGGC+CGG + tig0023178:35697-35716 Msa1406020:five_prime_UTR 65.0%
CCCCGTCCTCTAGTGCGAAG+TGG - tig0023178:40048-40067 None:intergenic 65.0%
!! GCCGGCCCCTTAGTTTGCCC+AGG - tig0023178:35701-35720 None:intergenic 70.0%
ATGCACTCGGGGACGCGAGC+AGG + tig0023178:37864-37883 Msa1406020:intron 70.0%
CACTCGGGGACGCGAGCAGG+TGG + tig0023178:37867-37886 Msa1406020:intron 75.0%
Chromosome Type Strat End Strand Name
tig0023178 gene 33095 40634 33095 ID=Msa1406020;Name=Msa1406020
tig0023178 mRNA 33095 40634 33095 ID=Msa1406020-mRNA-1;Parent=Msa1406020;Name=Msa1406020-mRNA-1;_AED=0.21;_eAED=0.21;_QI=1147|1|1|1|0.85|0.86|15|251|201
tig0023178 exon 33095 33439 33095 ID=Msa1406020-mRNA-1:exon:24349;Parent=Msa1406020-mRNA-1
tig0023178 exon 33519 33607 33519 ID=Msa1406020-mRNA-1:exon:24350;Parent=Msa1406020-mRNA-1
tig0023178 exon 34444 34522 34444 ID=Msa1406020-mRNA-1:exon:24351;Parent=Msa1406020-mRNA-1
tig0023178 exon 34612 34671 34612 ID=Msa1406020-mRNA-1:exon:24352;Parent=Msa1406020-mRNA-1
tig0023178 exon 34778 34844 34778 ID=Msa1406020-mRNA-1:exon:24353;Parent=Msa1406020-mRNA-1
tig0023178 exon 35124 35248 35124 ID=Msa1406020-mRNA-1:exon:24354;Parent=Msa1406020-mRNA-1
tig0023178 exon 35324 35425 35324 ID=Msa1406020-mRNA-1:exon:24355;Parent=Msa1406020-mRNA-1
tig0023178 exon 35504 35803 35504 ID=Msa1406020-mRNA-1:exon:24356;Parent=Msa1406020-mRNA-1
tig0023178 exon 35860 35881 35860 ID=Msa1406020-mRNA-1:exon:24357;Parent=Msa1406020-mRNA-1
tig0023178 exon 36022 36069 36022 ID=Msa1406020-mRNA-1:exon:24358;Parent=Msa1406020-mRNA-1
tig0023178 exon 36166 36228 36166 ID=Msa1406020-mRNA-1:exon:24359;Parent=Msa1406020-mRNA-1
tig0023178 exon 36317 36397 36317 ID=Msa1406020-mRNA-1:exon:24360;Parent=Msa1406020-mRNA-1
tig0023178 exon 36490 36588 36490 ID=Msa1406020-mRNA-1:exon:24361;Parent=Msa1406020-mRNA-1
tig0023178 exon 40000 40137 40000 ID=Msa1406020-mRNA-1:exon:24362;Parent=Msa1406020-mRNA-1
tig0023178 exon 40249 40634 40249 ID=Msa1406020-mRNA-1:exon:24363;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 33095 33439 33095 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 33519 33607 33519 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 34444 34522 34444 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 34612 34671 34612 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 34778 34844 34778 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 35124 35248 35124 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 35324 35425 35324 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 five_prime_UTR 35504 35783 35504 ID=Msa1406020-mRNA-1:five_prime_utr;Parent=Msa1406020-mRNA-1
tig0023178 CDS 35784 35803 35784 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 35860 35881 35860 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 36022 36069 36022 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 36166 36228 36166 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 36317 36397 36317 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 36490 36588 36490 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 40000 40137 40000 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 CDS 40249 40383 40249 ID=Msa1406020-mRNA-1:cds;Parent=Msa1406020-mRNA-1
tig0023178 three_prime_UTR 40384 40634 40384 ID=Msa1406020-mRNA-1:three_prime_utr;Parent=Msa1406020-mRNA-1
Gene Sequence

>Msa1406020

ATGAAGATCAGGAATCCGAGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCAGGTCCCATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCTGACGCGGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTAGTAATGACATCGGTTGCTGTCCTAAAAGTGGACGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCTTATCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTCGGAGGGCTGCCAATTGTTGCTGTTGGGGCGTTGCTTCTTTACGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTGATGGTATCCGAAATCTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTCGCTGCCAATGCTGTTGTTACCTTTGCATTCTCACCATTGAAGGAGTATCTTGGAGCAGAGAACCTTTTTCTCCTTTTTGCGGCCATTGCATTAGTGTCACTTGTGTTCATTGTAACTTCTGTCCCAGAGACAAAAGGCTTGAGCTTAGAAGAAATTGAATCCAAAATCTTGAAGTGA
Protein sequence

>Msa1406020

MKIRNPRGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGAENLFLLFAAIALVSLVFIVTSVPETKGLSLEEIESKILK*