AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218110 MtrunA17_Chr4g0067761 97.966 639 11 2 1 637 1 639 0.0 1270
Msa1218110 MtrunA17_Chr2g0298151 23.239 284 181 7 108 374 654 917 9.85e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218110 AT3G16810.1 57.643 628 246 6 13 627 13 633 0.0 716
Msa1218110 AT3G20250.1 23.549 293 183 6 88 362 557 826 5.40e-13 72.8
Msa1218110 AT3G20250.3 23.549 293 183 6 88 362 593 862 9.28e-13 72.0
Msa1218110 AT3G20250.2 23.549 293 183 6 88 362 593 862 9.28e-13 72.0
Msa1218110 AT4G25880.1 22.383 277 183 5 108 372 530 786 2.97e-11 67.4
Msa1218110 AT4G25880.5 22.383 277 183 5 108 372 530 786 2.97e-11 67.4
Msa1218110 AT4G25880.4 22.383 277 183 5 108 372 530 786 3.63e-11 67.0
Msa1218110 AT4G25880.3 23.102 303 195 8 87 372 499 780 6.54e-11 66.2
Msa1218110 AT4G25880.2 23.102 303 195 8 87 372 499 780 7.00e-11 65.9

Find 155 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACACAAAGAATTCCAATTT+TGG 0.142741 8_1:+80662171 None:intergenic
CCTGTAACGGGTTTCTATTC+TGG 0.144670 8_1:-80659073 Msa1218110:three_prime_UTR
AGAACTCCATTATCAATTAA+AGG 0.175027 8_1:+80659232 None:intergenic
TAAAAGGGAAATGTGAATTA+TGG 0.176731 8_1:-80659437 Msa1218110:CDS
CACAGAGCTTCAGTTGTTTA+AGG 0.177580 8_1:-80663180 Msa1218110:CDS
CATTGGCTTGCTTGTTCTTT+GGG 0.196667 8_1:+80659196 None:intergenic
ACTATCCCTTTCTCTAAAAT+TGG 0.204893 8_1:+80662426 None:intergenic
GGAATTCTTTGTGTGAAATA+TGG 0.217744 8_1:-80662163 Msa1218110:CDS
TCATTGGCTTGCTTGTTCTT+TGG 0.220078 8_1:+80659195 None:intergenic
AAAACAGCTTATCATCAATA+TGG 0.256659 8_1:-80661990 Msa1218110:CDS
GAACTGATACGGTCAAATTT+TGG 0.259001 8_1:-80659778 Msa1218110:CDS
TTGTGGAAGGAAGCTTTAAA+AGG 0.260217 8_1:-80659453 Msa1218110:CDS
CTTCTTTGAAGGAACGAATT+TGG 0.265587 8_1:+80665632 None:intergenic
ATTAGGAGCTTGCACGTCTA+TGG 0.268442 8_1:-80664672 Msa1218110:intron
ACAAAGGATGGAGCCAAAAT+TGG 0.283183 8_1:-80662184 Msa1218110:CDS
CATTACTTCTCGTGTTCTTC+AGG 0.293028 8_1:-80664446 Msa1218110:intron
TTATCATCGGAGTGAGGTTT+TGG 0.295244 8_1:+80665609 None:intergenic
TTGCAGCCTTTAATTGATAA+TGG 0.299069 8_1:-80659238 Msa1218110:CDS
TGGATTTGTTGAGAGTTAAA+AGG 0.302605 8_1:-80659053 Msa1218110:three_prime_UTR
AATTCTGAAGGAGCTTGTTT+TGG 0.303882 8_1:-80660699 Msa1218110:CDS
TCCAAGTTGGGTCTACAAAA+AGG 0.323159 8_1:-80662483 Msa1218110:CDS
CTGAAAACCTGAGGTGTACT+AGG 0.325480 8_1:+80665787 None:intergenic
AACAGTTGGGATGTAGTAAT+TGG 0.330105 8_1:+80660386 None:intergenic
AAAAGGGAAATGTGAATTAT+GGG 0.335970 8_1:-80659436 Msa1218110:CDS
ATACTTTAGCATTGCTGATA+AGG 0.342358 8_1:-80662370 Msa1218110:intron
CCAGAATAGAAACCCGTTAC+AGG 0.342460 8_1:+80659073 None:intergenic
GCCGCCATTGCTGTGTTCTA+AGG 0.353280 8_1:+80665738 None:intergenic
TTGCTTGTTCTTTGGGCTGT+GGG 0.362915 8_1:+80659203 None:intergenic
TTGTTGCTTCTGTCTGTGAT+TGG 0.369405 8_1:-80658810 Msa1218110:three_prime_UTR
CAAGAGATGCTATCGCTTTG+TGG 0.385624 8_1:+80659586 None:intergenic
GACGACGTTCACGGGCGTTA+AGG 0.389188 8_1:+80665568 None:intergenic
CTTGCTTGTTCTTTGGGCTG+TGG 0.393462 8_1:+80659202 None:intergenic
GACCATTAGAAAACTAATCT+TGG 0.395943 8_1:-80659499 Msa1218110:CDS
ATTTACCTGGTTTCCTTCGT+TGG 0.397626 8_1:+80663149 None:intergenic
TGGTTTCCTTCGTTGGGACT+TGG 0.399908 8_1:+80663156 None:intergenic
GCCTGCCAGTTGTTTCTTCG+AGG 0.401730 8_1:+80664104 None:intergenic
TCAAAAGCAAGAGCTACTTT+TGG 0.408655 8_1:-80663213 Msa1218110:CDS
GAAACTTCCAAGGTTTCAAT+TGG 0.409784 8_1:-80660191 Msa1218110:CDS
GAATTCTTTGTGTGAAATAT+GGG 0.413285 8_1:-80662162 Msa1218110:CDS
TTTCACTTTGCTGTCTTCCA+TGG 0.415149 8_1:+80660157 None:intergenic
TATCCTACACAGAGTCTTGT+TGG 0.415354 8_1:-80662394 Msa1218110:CDS
CACAAGATGGAAGCAAAGTC+GGG 0.417316 8_1:+80659471 None:intergenic
GGGAAGATTCATGAGATTGC+AGG 0.426442 8_1:-80664475 Msa1218110:CDS
GTAGTCAGCCATATGGTGTT+TGG 0.426766 8_1:-80658855 Msa1218110:three_prime_UTR
TTTACCTGGTTTCCTTCGTT+GGG 0.426906 8_1:+80663150 None:intergenic
ACGACGTTCACGGGCGTTAA+GGG 0.429017 8_1:+80665569 None:intergenic
TGGCACATGCAGGTTGCGAC+AGG 0.429332 8_1:-80659660 Msa1218110:intron
CGCCACATGGTTGGATCAGT+TGG 0.434378 8_1:-80664042 Msa1218110:intron
TTCATAGAAGCAAGTTCATC+AGG 0.440234 8_1:+80660349 None:intergenic
CCACTACTTATCAGAATGAT+TGG 0.441497 8_1:-80662208 Msa1218110:CDS
TGCTCCTCTTCTTCGCCACA+TGG 0.442439 8_1:-80664055 Msa1218110:CDS
CCTCTTCTTCGCCACATGGT+TGG 0.442831 8_1:-80664051 Msa1218110:CDS
CTTTCTTTCCACTCTCAGCT+AGG 0.443772 8_1:+80660090 None:intergenic
CCGACTTTGCTTCCATCTTG+TGG 0.451047 8_1:-80659470 Msa1218110:CDS
TTGCTTCTGTCTGTGATTGG+AGG 0.454031 8_1:-80658807 Msa1218110:three_prime_UTR
TTTGTTCTTGTCTTTATCAT+CGG 0.455421 8_1:+80665596 None:intergenic
GGCTTTATCTCTACTCTTCG+TGG 0.455624 8_1:-80664084 Msa1218110:CDS
AAAGGATTGAAAGGGCATAT+AGG 0.458943 8_1:-80662014 Msa1218110:CDS
CATGACAAATTCTAAATGAT+AGG 0.462488 8_1:-80658763 Msa1218110:three_prime_UTR
ACTTTGTGATTGCAGCTGTA+AGG 0.468599 8_1:-80659320 Msa1218110:intron
GCAGCATAAATGAAAATCAT+TGG 0.469673 8_1:+80659179 None:intergenic
ATCGTCGCCAATTGAAACCT+TGG 0.470911 8_1:+80660184 None:intergenic
TTATCATCAATATGGGTGTA+TGG 0.471070 8_1:-80661982 Msa1218110:intron
AAACAGCTTATCATCAATAT+GGG 0.473207 8_1:-80661989 Msa1218110:CDS
TCTTGTGAATCTTCTGACTT+AGG 0.475417 8_1:+80659555 None:intergenic
GGGCATATTGCATCCAACTT+TGG 0.476332 8_1:-80659628 Msa1218110:CDS
AAGATTATCAAAGGATTGAA+AGG 0.476896 8_1:-80662023 Msa1218110:CDS
GGATGTAGTAATTGGAGTAA+AGG 0.480444 8_1:+80660394 None:intergenic
AGCATGGTGACGACGTTCAC+GGG 0.482377 8_1:+80665560 None:intergenic
AGCTCCTGCCTTCTGACCAA+TGG 0.482668 8_1:+80660065 None:intergenic
CATAAACCCTAGTACACCTC+AGG 0.483948 8_1:-80665794 Msa1218110:five_prime_UTR
CAGAACGGCCAAACACCATA+TGG 0.484895 8_1:+80658847 None:intergenic
TAAAGCTTCCTTCCACAAGA+TGG 0.488728 8_1:+80659458 None:intergenic
TTAGGAGCTTGCACGTCTAT+GGG 0.490037 8_1:-80664671 Msa1218110:intron
TTCAGCCTCGAAGAAACAAC+TGG 0.493211 8_1:-80664109 Msa1218110:intron
AGACCCATTGGTCAGAAGGC+AGG 0.495755 8_1:-80660069 Msa1218110:CDS
TGTGGAAGGAAGCTTTAAAA+GGG 0.498317 8_1:-80659452 Msa1218110:CDS
TTTGGAATCAACAGATTCAA+AGG 0.498812 8_1:-80659284 Msa1218110:CDS
GATTTCTTCGGATTAGAAGA+AGG 0.498874 8_1:+80665660 None:intergenic
AATTTGGTAGTGGATTTCTT+CGG 0.499576 8_1:+80665648 None:intergenic
TTAATCTTATCATCCAAAGT+TGG 0.499673 8_1:+80659615 None:intergenic
TATACCTTCTCTGTCTCTCA+AGG 0.501438 8_1:-80660320 Msa1218110:intron
GCTCCTGCCTTCTGACCAAT+GGG 0.505652 8_1:+80660066 None:intergenic
ATGAGACCTACCTGTGACCA+TGG 0.511280 8_1:+80659412 None:intergenic
ACTAGATGTAATGTCCAAGT+TGG 0.512736 8_1:-80662496 Msa1218110:CDS
AGAAAGACCCATTGGTCAGA+AGG 0.515599 8_1:-80660073 Msa1218110:CDS
GAAAGAAACTGTATCTCAGA+TGG 0.516225 8_1:-80659151 Msa1218110:three_prime_UTR
AATTATGGGCCCATGGTCAC+AGG 0.521124 8_1:-80659422 Msa1218110:intron
CTGAAGTAGCGTGAACAGTT+GGG 0.521170 8_1:+80660373 None:intergenic
TGAAGGAACGAATTTGGTAG+TGG 0.522039 8_1:+80665638 None:intergenic
GACTACTAAGATACAATAGC+AGG 0.523626 8_1:+80658872 None:intergenic
CCACAAGATGGAAGCAAAGT+CGG 0.524520 8_1:+80659470 None:intergenic
TATCTTAGTAGTCAGCCATA+TGG 0.524563 8_1:-80658862 Msa1218110:three_prime_UTR
ACTGAAGTAGCGTGAACAGT+TGG 0.524906 8_1:+80660372 None:intergenic
AGAATGATTGGTACAAAGGA+TGG 0.526326 8_1:-80662196 Msa1218110:CDS
CTTTGCTTCCATCTTGTGGA+AGG 0.526863 8_1:-80659466 Msa1218110:CDS
TAGCATGGTGACGACGTTCA+CGG 0.527017 8_1:+80665559 None:intergenic
GATATATGCATTGAGAATGT+AGG 0.530035 8_1:-80659802 Msa1218110:CDS
GAAAGAAAGAAGATTATCAA+AGG 0.530838 8_1:-80662032 Msa1218110:CDS
CTAGATGTAATGTCCAAGTT+GGG 0.532264 8_1:-80662495 Msa1218110:CDS
CACATGCAGGTTGCGACAGG+GGG 0.538161 8_1:-80659657 Msa1218110:intron
AATTGGCGACGATGATTCCA+TGG 0.539580 8_1:-80660174 Msa1218110:CDS
GTAGTGGACTTGATAACACT+TGG 0.547931 8_1:+80662224 None:intergenic
CCAACCATGTGGCGAAGAAG+AGG 0.550072 8_1:+80664051 None:intergenic
GATACAATAGCAGGGTGTGT+AGG 0.552182 8_1:+80658881 None:intergenic
GTGAACAGCATATGCACTGT+AGG 0.552683 8_1:+80664254 None:intergenic
CGAGCTTCAATCAATTCTGA+AGG 0.557786 8_1:-80660711 Msa1218110:CDS
TATCAGAATGATTGGTACAA+AGG 0.564734 8_1:-80662200 Msa1218110:CDS
AGATTATCAAAGGATTGAAA+GGG 0.570345 8_1:-80662022 Msa1218110:CDS
CCAATCATTCTGATAAGTAG+TGG 0.571393 8_1:+80662208 None:intergenic
GCCTCGAAGAAACAACTGGC+AGG 0.571669 8_1:-80664105 Msa1218110:CDS
TAACTTGTTCAAGAGTGTAA+TGG 0.572625 8_1:+80665411 None:intergenic
GCTGTGTTCTAAGGAGAAAG+AGG 0.576878 8_1:+80665747 None:intergenic
CGACGTTCACGGGCGTTAAG+GGG 0.577347 8_1:+80665570 None:intergenic
CTCTCAGACAGAAACTTCCA+AGG 0.580859 8_1:-80660201 Msa1218110:CDS
ATCGTCGACAACTGAAAGGA+TGG 0.583943 8_1:+80660855 None:intergenic
GATACTGACCTAGCTGAGAG+TGG 0.586495 8_1:-80660098 Msa1218110:CDS
TTGTATCGTCGACAACTGAA+AGG 0.588441 8_1:+80660851 None:intergenic
AAAATGATATAGGGGTGCGT+TGG 0.590105 8_1:+80659103 None:intergenic
TGAAAACCTGAGGTGTACTA+GGG 0.590798 8_1:+80665788 None:intergenic
TCCTTAGAACACAGCAATGG+CGG 0.591307 8_1:-80665739 Msa1218110:exon
TGAACGTCGTCACCATGCTA+AGG 0.593448 8_1:-80665556 Msa1218110:intron
GCACATGCAGGTTGCGACAG+GGG 0.593999 8_1:-80659658 Msa1218110:intron
GGAAGATTCATGAGATTGCA+GGG 0.595643 8_1:-80664474 Msa1218110:CDS
AGAATGTAGGAGAACTGATA+CGG 0.596881 8_1:-80659789 Msa1218110:CDS
AAGTCCCAACGAAGGAAACC+AGG 0.600794 8_1:-80663154 Msa1218110:intron
AAATGTGAATTATGGGCCCA+TGG 0.606288 8_1:-80659429 Msa1218110:CDS
TAATGAAGATAAAACTTCTG+TGG 0.606779 8_1:-80660123 Msa1218110:CDS
AGACTCTGTGTAGGATAGAG+TGG 0.617552 8_1:+80662400 None:intergenic
GTAAAGAAGATGCTTGACAA+TGG 0.620626 8_1:-80664228 Msa1218110:intron
TTGTCTTTATCATCGGAGTG+AGG 0.624569 8_1:+80665603 None:intergenic
TGAGACCTACCTGTGACCAT+GGG 0.625138 8_1:+80659413 None:intergenic
TTGGATTATCTCTGCAACAG+AGG 0.625333 8_1:+80662243 None:intergenic
GAGTGGAAAGAAAGACCCAT+TGG 0.626928 8_1:-80660081 Msa1218110:CDS
TAAGTCAGAAGATTCACAAG+AGG 0.627884 8_1:-80659553 Msa1218110:CDS
GATCAACAGTGGACTTGCAG+AGG 0.634217 8_1:-80660039 Msa1218110:intron
GAAACCTTGAGAGACAGAGA+AGG 0.636451 8_1:+80660316 None:intergenic
TGTTGAGCATGCATATGACT+TGG 0.636548 8_1:-80663246 Msa1218110:CDS
CTTAAACAACTGAAGCTCTG+TGG 0.638915 8_1:+80663181 None:intergenic
TTCTCCTTAGAACACAGCAA+TGG 0.649347 8_1:-80665742 Msa1218110:exon
AGAAATGAGTAACCTTAGCA+TGG 0.656910 8_1:+80665544 None:intergenic
ATTCCAACAAGACTCTGTGT+AGG 0.656911 8_1:+80662391 None:intergenic
TGTGAAATATGGGAATGCCA+AGG 0.660873 8_1:-80662152 Msa1218110:intron
CGATACAAAACTGATAACAA+AGG 0.663051 8_1:-80660836 Msa1218110:intron
TAGGCTAGATTTAGAAAATG+CGG 0.671371 8_1:+80664273 None:intergenic
ACTACTAAGATACAATAGCA+GGG 0.671397 8_1:+80658873 None:intergenic
CTCGCAGAGCTGAAAACCTG+AGG 0.672247 8_1:+80665778 None:intergenic
CAGGAGCTATTGATCAACAG+TGG 0.673558 8_1:-80660050 Msa1218110:CDS
GGCGAAGAAGAGGAGCAACA+TGG 0.679211 8_1:+80664061 None:intergenic
ACAAGATGGAAGCAAAGTCG+GGG 0.683734 8_1:+80659472 None:intergenic
GTGTTCTAAGGAGAAAGAGG+AGG 0.694268 8_1:+80665750 None:intergenic
GGCGGCGAAGAAGCAACAAG+AGG 0.698926 8_1:-80665721 Msa1218110:CDS
TAAGGACCAAGTCCCAACGA+AGG 0.699626 8_1:-80663162 Msa1218110:CDS
TGGCAAAGAGGTCATATACG+AGG 0.702050 8_1:-80659758 Msa1218110:intron
TACCAACTGATCCAACCATG+TGG 0.727111 8_1:+80664040 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAAAGAGATAATTAA+CGG + chr8_1:80659143-80659162 None:intergenic 10.0%
!! CATAAAAATATAAATATGTT+AGG + chr8_1:80663403-80663422 None:intergenic 10.0%
!! AAACGATAAAATAAATGTAA+GGG - chr8_1:80659290-80659309 Msa1218110:CDS 15.0%
!! TAAGGTTCAAATAAAAAATT+AGG + chr8_1:80659983-80660002 None:intergenic 15.0%
!!! TATATCATAGTTTTAATCTT+TGG - chr8_1:80660144-80660163 Msa1218110:CDS 15.0%
!!! AGCTTTGAAATAAATAAAAA+GGG + chr8_1:80660986-80661005 None:intergenic 15.0%
!! TATACACAAAACTTAATTTA+AGG + chr8_1:80661240-80661259 None:intergenic 15.0%
!!! GTTATATTATTTCTAAAATG+TGG + chr8_1:80661446-80661465 None:intergenic 15.0%
!!! TTGATTTGTTTATATACTTT+TGG - chr8_1:80661769-80661788 Msa1218110:intron 15.0%
!!! TGCTTTTCTTTTTTAAATTA+CGG + chr8_1:80663288-80663307 None:intergenic 15.0%
!!! TTCAAATTTTAAGTTCTAAA+TGG + chr8_1:80663612-80663631 None:intergenic 15.0%
!!! TTTTATTCATTTAAACTCTT+AGG - chr8_1:80663634-80663653 Msa1218110:intron 15.0%
!!! TTTTAAAATATTCTCATTTC+AGG - chr8_1:80663777-80663796 Msa1218110:intron 15.0%
!! ATGAAAACTATAGTTTATAT+TGG + chr8_1:80663907-80663926 None:intergenic 15.0%
!! TTATTTACATCAATAAATTC+TGG - chr8_1:80664640-80664659 Msa1218110:CDS 15.0%
!!! TTGAAAATTTCTTTTCAAAT+CGG - chr8_1:80665000-80665019 Msa1218110:intron 15.0%
!!! TGTAATTGTTAAGTTTTTTA+AGG + chr8_1:80665543-80665562 None:intergenic 15.0%
!! AAATCGATGAAATTAAAAAT+GGG + chr8_1:80665598-80665617 None:intergenic 15.0%
!! AAAATCGATGAAATTAAAAA+TGG + chr8_1:80665599-80665618 None:intergenic 15.0%
!! ATGATTAAAAATAAACAGAA+CGG + chr8_1:80665692-80665711 None:intergenic 15.0%
!!! TTTTTCTGAATCGATTAATT+CGG - chr8_1:80659023-80659042 Msa1218110:three_prime_UTR 20.0%
!!! TAATTCGGATTATGATTTTA+TGG - chr8_1:80659038-80659057 Msa1218110:three_prime_UTR 20.0%
!! CAAACGATAAAATAAATGTA+AGG - chr8_1:80659289-80659308 Msa1218110:CDS 20.0%
!!! ATTATTATTTCCTTTTGAAG+AGG - chr8_1:80659780-80659799 Msa1218110:CDS 20.0%
!! CTATGATATATACACTTAAA+GGG + chr8_1:80660134-80660153 None:intergenic 20.0%
!! ACTATGATATATACACTTAA+AGG + chr8_1:80660135-80660154 None:intergenic 20.0%
!!! CAGCTTTGAAATAAATAAAA+AGG + chr8_1:80660987-80661006 None:intergenic 20.0%
!!! TTTTATTTATTTCAAAGCTG+TGG - chr8_1:80660987-80661006 Msa1218110:intron 20.0%
!!! AGGAATTATATTAAAGCATT+TGG - chr8_1:80661406-80661425 Msa1218110:intron 20.0%
!!! GGAATTATATTAAAGCATTT+GGG - chr8_1:80661407-80661426 Msa1218110:intron 20.0%
!! AATAATATAACAATCATGAG+TGG - chr8_1:80661455-80661474 Msa1218110:intron 20.0%
!!! ATAATTTTATGTAATGAAGC+TGG - chr8_1:80661822-80661841 Msa1218110:intron 20.0%
!! CAATTATTGCTAACAAAATT+CGG + chr8_1:80661866-80661885 None:intergenic 20.0%
!! AAAAACCAAAAATTGAAAGT+AGG + chr8_1:80662604-80662623 None:intergenic 20.0%
!! ACATATAGTAAAAAACAATG+TGG - chr8_1:80662650-80662669 Msa1218110:intron 20.0%
!!! AATTTTAAGTTCTAAATGGA+AGG + chr8_1:80663608-80663627 None:intergenic 20.0%
!!! TTATGCATGGTTTTATTTAT+GGG + chr8_1:80664025-80664044 None:intergenic 20.0%
!!! TTTATGCATGGTTTTATTTA+TGG + chr8_1:80664026-80664045 None:intergenic 20.0%
!! AAATAAATAGTCTTTATGCA+TGG + chr8_1:80664038-80664057 None:intergenic 20.0%
!! TATAAAAAGACGAAAAAGAT+GGG + chr8_1:80664238-80664257 None:intergenic 20.0%
!!! AGTTTTATCTTCATTAACTT+CGG + chr8_1:80664394-80664413 None:intergenic 20.0%
!! AGGATAACTAAATTATTAGA+AGG + chr8_1:80664525-80664544 None:intergenic 20.0%
!! TATAAAACACAAGTAATACA+TGG + chr8_1:80664549-80664568 None:intergenic 20.0%
!!! CTGATTCAATTTTTTTTGAT+GGG - chr8_1:80664612-80664631 Msa1218110:intron 20.0%
!!! GATTTGAAAAGAAATTTTCA+AGG + chr8_1:80665001-80665020 None:intergenic 20.0%
!!! ATTTTATGATTACTGTAACA+AGG - chr8_1:80665614-80665633 Msa1218110:CDS 20.0%
!! TCTATTTCGAAGAATAAAAA+TGG + chr8_1:80665788-80665807 None:intergenic 20.0%
! TTTGTTCTTGTCTTTATCAT+CGG + chr8_1:80658928-80658947 None:intergenic 25.0%
!!! TTTTATGGTTATTTCGTTTC+AGG - chr8_1:80659053-80659072 Msa1218110:three_prime_UTR 25.0%
! AATAAGCTCTTTATCCAAAT+AGG + chr8_1:80659222-80659241 None:intergenic 25.0%
! ATTATAAGCTCTTATGCATA+AGG - chr8_1:80659362-80659381 Msa1218110:intron 25.0%
! CTTATTATTATAAATGCTCC+AGG + chr8_1:80659630-80659649 None:intergenic 25.0%
! TTGAACATCTAATTGCAATT+AGG - chr8_1:80659832-80659851 Msa1218110:intron 25.0%
! TTGAACCTTAATATAACGTT+AGG - chr8_1:80659993-80660012 Msa1218110:intron 25.0%
!!! ATTTAAAGCTAGCTTGTTTA+AGG - chr8_1:80660633-80660652 Msa1218110:intron 25.0%
!!! TTTAAAGCTAGCTTGTTTAA+GGG - chr8_1:80660634-80660653 Msa1218110:intron 25.0%
! ATCATTCTCAACAAGAAAAA+CGG + chr8_1:80661494-80661513 None:intergenic 25.0%
!!! TTATCTTATTTTCCTCTTTC+TGG - chr8_1:80661961-80661980 Msa1218110:intron 25.0%
! GAATTCTTTGTGTGAAATAT+GGG - chr8_1:80662359-80662378 Msa1218110:intron 25.0%
! TCTTCTTTCTTTCCTAAATA+GGG + chr8_1:80662482-80662501 None:intergenic 25.0%
! ATCTTCTTTCTTTCCTAAAT+AGG + chr8_1:80662483-80662502 None:intergenic 25.0%
! GAAAGAAAGAAGATTATCAA+AGG - chr8_1:80662489-80662508 Msa1218110:CDS 25.0%
! AAGATTATCAAAGGATTGAA+AGG - chr8_1:80662498-80662517 Msa1218110:CDS 25.0%
! AGATTATCAAAGGATTGAAA+GGG - chr8_1:80662499-80662518 Msa1218110:CDS 25.0%
! AAAACAGCTTATCATCAATA+TGG - chr8_1:80662531-80662550 Msa1218110:intron 25.0%
! AAACAGCTTATCATCAATAT+GGG - chr8_1:80662532-80662551 Msa1218110:intron 25.0%
! TAACTCTTAATCTTGCTTAA+TGG - chr8_1:80662623-80662642 Msa1218110:intron 25.0%
! AACTCTTAATCTTGCTTAAT+GGG - chr8_1:80662624-80662643 Msa1218110:intron 25.0%
! ATTTCTGTTTACAAAACACT+TGG - chr8_1:80662739-80662758 Msa1218110:intron 25.0%
! TTTCTGTTTACAAAACACTT+GGG - chr8_1:80662740-80662759 Msa1218110:intron 25.0%
!! TATTTTATGTTCTTATGACG+TGG - chr8_1:80664053-80664072 Msa1218110:CDS 25.0%
!!! GTTTTGATGAATATAACTTC+CGG - chr8_1:80664084-80664103 Msa1218110:CDS 25.0%
! GTATAAAAAGACGAAAAAGA+TGG + chr8_1:80664239-80664258 None:intergenic 25.0%
!! GTTTTATCTTCATTAACTTC+GGG + chr8_1:80664393-80664412 None:intergenic 25.0%
! TAATGAAGATAAAACTTCTG+TGG - chr8_1:80664398-80664417 Msa1218110:intron 25.0%
! CCATCAAAAAAAATTGAATC+AGG + chr8_1:80664614-80664633 None:intergenic 25.0%
!!! CCTGATTCAATTTTTTTTGA+TGG - chr8_1:80664611-80664630 Msa1218110:intron 25.0%
!!! TCAATTTTTTTTGATGGGAA+AGG - chr8_1:80664617-80664636 Msa1218110:intron 25.0%
!! TGCCTTTTTGATAAATTCAA+TGG - chr8_1:80664841-80664860 Msa1218110:intron 25.0%
! TGCCATTGAATTTATCAAAA+AGG + chr8_1:80664846-80664865 None:intergenic 25.0%
! TTAATCTTATCATCCAAAGT+TGG + chr8_1:80664909-80664928 None:intergenic 25.0%
! TAAAAGGGAAATGTGAATTA+TGG - chr8_1:80665084-80665103 Msa1218110:intron 25.0%
! AAAAGGGAAATGTGAATTAT+GGG - chr8_1:80665085-80665104 Msa1218110:intron 25.0%
! AGAACTCCATTATCAATTAA+AGG + chr8_1:80665292-80665311 None:intergenic 25.0%
! CATGACAAATTCTAAATGAT+AGG - chr8_1:80665758-80665777 Msa1218110:five_prime_UTR 25.0%
!! AATTTGGTAGTGGATTTCTT+CGG + chr8_1:80658876-80658895 None:intergenic 30.0%
! AGAAAAAGTGATTTGGAATC+GGG + chr8_1:80659010-80659029 None:intergenic 30.0%
! CAGAAAAAGTGATTTGGAAT+CGG + chr8_1:80659011-80659030 None:intergenic 30.0%
TCGATTCAGAAAAAGTGATT+TGG + chr8_1:80659017-80659036 None:intergenic 30.0%
!! TAACTTGTTCAAGAGTGTAA+TGG + chr8_1:80659113-80659132 None:intergenic 30.0%
ATCCAAATAGGTAAAAGCAA+AGG + chr8_1:80659210-80659229 None:intergenic 30.0%
AATAAGCTGTTTATCAGAAC+AGG + chr8_1:80659316-80659335 None:intergenic 30.0%
TAAGTTGTGTGAAACTGTTT+GGG + chr8_1:80659484-80659503 None:intergenic 30.0%
ATAAGTTGTGTGAAACTGTT+TGG + chr8_1:80659485-80659504 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr8_1:80659519-80659538 Msa1218110:CDS 30.0%
AGCTTATACAAAAACAGTCT+AGG + chr8_1:80659545-80659564 None:intergenic 30.0%
!! ATAAGCTTTGTGAGAGTATT+TGG + chr8_1:80659701-80659720 None:intergenic 30.0%
TGAAATAACACCTCTTCAAA+AGG + chr8_1:80659793-80659812 None:intergenic 30.0%
! AGAAGCTCTAACAAAAATGA+AGG - chr8_1:80660024-80660043 Msa1218110:intron 30.0%
! GAAGCTCTAACAAAAATGAA+GGG - chr8_1:80660025-80660044 Msa1218110:intron 30.0%
! AAGCTCTAACAAAAATGAAG+GGG - chr8_1:80660026-80660045 Msa1218110:intron 30.0%
TAGGCTAGATTTAGAAAATG+CGG + chr8_1:80660251-80660270 None:intergenic 30.0%
TTGGTATGTAACATAGGTTT+GGG - chr8_1:80660498-80660517 Msa1218110:intron 30.0%
ATTTCAATGTGCAGCTATAA+AGG + chr8_1:80660605-80660624 None:intergenic 30.0%
!! TTAAAGCTAGCTTGTTTAAG+GGG - chr8_1:80660635-80660654 Msa1218110:intron 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr8_1:80660726-80660745 Msa1218110:intron 30.0%
TAATTTAAGGAAGCTGATGT+TGG + chr8_1:80661227-80661246 None:intergenic 30.0%
TTATCAATCAAACTGATGTC+AGG + chr8_1:80661806-80661825 None:intergenic 30.0%
AAATACAATACTCCAGAAAG+AGG + chr8_1:80661976-80661995 None:intergenic 30.0%
!! ATTCAGCCAATTTTAGAGAA+AGG - chr8_1:80662089-80662108 Msa1218110:intron 30.0%
!! TTCAGCCAATTTTAGAGAAA+GGG - chr8_1:80662090-80662109 Msa1218110:intron 30.0%
!! ACTATCCCTTTCTCTAAAAT+TGG + chr8_1:80662098-80662117 None:intergenic 30.0%
ATACTTTAGCATTGCTGATA+AGG - chr8_1:80662151-80662170 Msa1218110:intron 30.0%
TTTGTTACAGCTAAGGAATT+TGG - chr8_1:80662211-80662230 Msa1218110:CDS 30.0%
TATCAGAATGATTGGTACAA+AGG - chr8_1:80662321-80662340 Msa1218110:intron 30.0%
! CACACAAAGAATTCCAATTT+TGG + chr8_1:80662353-80662372 None:intergenic 30.0%
GGAATTCTTTGTGTGAAATA+TGG - chr8_1:80662358-80662377 Msa1218110:intron 30.0%
AATAGTTGCTAAACAAACCT+TGG + chr8_1:80662389-80662408 None:intergenic 30.0%
TTATCATCAATATGGGTGTA+TGG - chr8_1:80662539-80662558 Msa1218110:intron 30.0%
! AGCTACCTACTTTCAATTTT+TGG - chr8_1:80662596-80662615 Msa1218110:intron 30.0%
!! TGGGAAATTTTAGGGAAAAA+TGG - chr8_1:80662806-80662825 Msa1218110:intron 30.0%
!!! TGGAGATCTTTCACATTTTT+TGG - chr8_1:80662826-80662845 Msa1218110:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG + chr8_1:80662967-80662986 None:intergenic 30.0%
GAACTCAAAAATTGTATTGG+AGG + chr8_1:80662971-80662990 None:intergenic 30.0%
ATACAAAATCCTCCTGATTT+GGG + chr8_1:80662995-80663014 None:intergenic 30.0%
AATACAAAATCCTCCTGATT+TGG + chr8_1:80662996-80663015 None:intergenic 30.0%
TGACAAAATGTAAGCCTTAA+GGG + chr8_1:80663350-80663369 None:intergenic 30.0%
TTGACAAAATGTAAGCCTTA+AGG + chr8_1:80663351-80663370 None:intergenic 30.0%
TGTCAAAAAAAGAAGAAGTG+AGG - chr8_1:80663365-80663384 Msa1218110:intron 30.0%
CGATACAAAACTGATAACAA+AGG - chr8_1:80663685-80663704 Msa1218110:intron 30.0%
TAGATGCTAACTGCATATAA+AGG + chr8_1:80663958-80663977 None:intergenic 30.0%
ATATGCAGTTAGCATCTATT+TGG - chr8_1:80663960-80663979 Msa1218110:intron 30.0%
AAACACAAGTAATACATGGA+AGG + chr8_1:80664545-80664564 None:intergenic 30.0%
GATATATGCATTGAGAATGT+AGG - chr8_1:80664719-80664738 Msa1218110:intron 30.0%
GACCATTAGAAAACTAATCT+TGG - chr8_1:80665022-80665041 Msa1218110:intron 30.0%
!!! GTCCAAGATTAGTTTTCTAA+TGG + chr8_1:80665027-80665046 None:intergenic 30.0%
! TAAGGTTATCACTGCATTTT+TGG - chr8_1:80665219-80665238 Msa1218110:intron 30.0%
! TTTGGAATCAACAGATTCAA+AGG - chr8_1:80665237-80665256 Msa1218110:intron 30.0%
TTGCAGCCTTTAATTGATAA+TGG - chr8_1:80665283-80665302 Msa1218110:intron 30.0%
GCAGCATAAATGAAAATCAT+TGG + chr8_1:80665345-80665364 None:intergenic 30.0%
! TGATTTTCATTTATGCTGCA+CGG - chr8_1:80665346-80665365 Msa1218110:intron 30.0%
!! TGGATTTGTTGAGAGTTAAA+AGG - chr8_1:80665468-80665487 Msa1218110:intron 30.0%
ACTACTAAGATACAATAGCA+GGG + chr8_1:80665651-80665670 None:intergenic 30.0%
! GATTTCTTCGGATTAGAAGA+AGG + chr8_1:80658864-80658883 None:intergenic 35.0%
! CTTCTTTGAAGGAACGAATT+TGG + chr8_1:80658892-80658911 None:intergenic 35.0%
AGAAATGAGTAACCTTAGCA+TGG + chr8_1:80658980-80658999 None:intergenic 35.0%
!! AGCCTTTGCTTTTACCTATT+TGG - chr8_1:80659205-80659224 Msa1218110:CDS 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - chr8_1:80659569-80659588 Msa1218110:CDS 35.0%
TTCCAATCATCTGTTTCAAC+TGG + chr8_1:80659747-80659766 None:intergenic 35.0%
TTTCTGCAGAGTAACATACT+TGG + chr8_1:80659915-80659934 None:intergenic 35.0%
ACCTTAATATAACGTTAGGC+TGG - chr8_1:80659997-80660016 Msa1218110:intron 35.0%
ACCAGCCTAACGTTATATTA+AGG + chr8_1:80660001-80660020 None:intergenic 35.0%
GTAAAGAAGATGCTTGACAA+TGG - chr8_1:80660293-80660312 Msa1218110:intron 35.0%
AAGATGCTTGACAATGGTAA+TGG - chr8_1:80660299-80660318 Msa1218110:intron 35.0%
GTGTCGCACTTTATTCTAAT+TGG - chr8_1:80660377-80660396 Msa1218110:CDS 35.0%
! GATCAGTTGGTATGTAACAT+AGG - chr8_1:80660492-80660511 Msa1218110:intron 35.0%
GTTGGTATGTAACATAGGTT+TGG - chr8_1:80660497-80660516 Msa1218110:intron 35.0%
AACATAGGTTTGGGCATATT+TGG - chr8_1:80660507-80660526 Msa1218110:intron 35.0%
ACAGGTGAAAAACTTTGATC+TGG + chr8_1:80660575-80660594 None:intergenic 35.0%
! CAAAGTTTTTCACCTGTTTG+TGG - chr8_1:80660578-80660597 Msa1218110:intron 35.0%
!! TAAAGCTAGCTTGTTTAAGG+GGG - chr8_1:80660636-80660655 Msa1218110:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr8_1:80660725-80660744 Msa1218110:CDS 35.0%
AAGGTCACAAATTCAAGTCT+TGG - chr8_1:80660854-80660873 Msa1218110:CDS 35.0%
ACAACCTATTGTGTAGAAAC+AGG - chr8_1:80660879-80660898 Msa1218110:intron 35.0%
CAACCTATTGTGTAGAAACA+GGG - chr8_1:80660880-80660899 Msa1218110:intron 35.0%
!! TTACCCTGTTTCTACACAAT+AGG + chr8_1:80660886-80660905 None:intergenic 35.0%
TATTGTGTAGAAACAGGGTA+AGG - chr8_1:80660885-80660904 Msa1218110:intron 35.0%
AATAAATAAAAAGGGCAGCC+CGG + chr8_1:80660978-80660997 None:intergenic 35.0%
!! TCAAAAGCAAGAGCTACTTT+TGG - chr8_1:80661308-80661327 Msa1218110:intron 35.0%
CTGACATCAGAATATTTACC+TGG + chr8_1:80661388-80661407 None:intergenic 35.0%
CAGGTAAATATTCTGATGTC+AGG - chr8_1:80661386-80661405 Msa1218110:intron 35.0%
! AAAGCATTTGGGACATTGTT+AGG - chr8_1:80661418-80661437 Msa1218110:intron 35.0%
AAGATTGCAAGTTATCCAAC+AGG - chr8_1:80661580-80661599 Msa1218110:intron 35.0%
AAAGCTAATTAAGTGCCTGT+TGG + chr8_1:80661598-80661617 None:intergenic 35.0%
!!! ATTAGCTTTTGCTTGACTAG+AGG - chr8_1:80661609-80661628 Msa1218110:intron 35.0%
AAGAATATGCCGTCATACTA+CGG - chr8_1:80661674-80661693 Msa1218110:intron 35.0%
TGTTAAAACCCGTAGTATGA+CGG + chr8_1:80661686-80661705 None:intergenic 35.0%
AATTGCTACTCTTCATGATC+TGG - chr8_1:80661881-80661900 Msa1218110:intron 35.0%
! TTTTACTGATCACGATCTGA+TGG - chr8_1:80661922-80661941 Msa1218110:intron 35.0%
ACTAGATGTAATGTCCAAGT+TGG - chr8_1:80662025-80662044 Msa1218110:CDS 35.0%
CTAGATGTAATGTCCAAGTT+GGG - chr8_1:80662026-80662045 Msa1218110:CDS 35.0%
ATTGTTGCGGGAAAGAAAAA+GGG + chr8_1:80662180-80662199 None:intergenic 35.0%
AATTGTTGCGGGAAAGAAAA+AGG + chr8_1:80662181-80662200 None:intergenic 35.0%
AAAACCACAACGAATTGTTG+CGG + chr8_1:80662193-80662212 None:intergenic 35.0%
! TGTGGTTTTTGTTACAGCTA+AGG - chr8_1:80662204-80662223 Msa1218110:CDS 35.0%
ACAGCTAAGGAATTTGGTTA+TGG - chr8_1:80662217-80662236 Msa1218110:CDS 35.0%
CCAATCATTCTGATAAGTAG+TGG + chr8_1:80662316-80662335 None:intergenic 35.0%
CCACTACTTATCAGAATGAT+TGG - chr8_1:80662313-80662332 Msa1218110:intron 35.0%
AGAATGATTGGTACAAAGGA+TGG - chr8_1:80662325-80662344 Msa1218110:intron 35.0%
CTACTTCACATTCCCTATTT+AGG - chr8_1:80662467-80662486 Msa1218110:CDS 35.0%
! AAAGGATTGAAAGGGCATAT+AGG - chr8_1:80662507-80662526 Msa1218110:intron 35.0%
TAAAAAACAATGTGGCCTTC+TGG - chr8_1:80662658-80662677 Msa1218110:intron 35.0%
!! TTCTGGAACTAGGTCAAAAT+GGG - chr8_1:80662675-80662694 Msa1218110:intron 35.0%
!! AAAACACTTGGGCTTTGTTT+GGG - chr8_1:80662751-80662770 Msa1218110:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG + chr8_1:80662968-80662987 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG + chr8_1:80662974-80662993 None:intergenic 35.0%
! TACAAAATCCTCCTGATTTG+GGG + chr8_1:80662994-80663013 None:intergenic 35.0%
TGAAATAAAGGACTTCGAGA+GGG + chr8_1:80663049-80663068 None:intergenic 35.0%
ATGAAATAAAGGACTTCGAG+AGG + chr8_1:80663050-80663069 None:intergenic 35.0%
TATGTTTGGATGAAGGGTTT+AGG + chr8_1:80663327-80663346 None:intergenic 35.0%
! TAAGGGTATGTTTGGATGAA+GGG + chr8_1:80663333-80663352 None:intergenic 35.0%
! TTAAGGGTATGTTTGGATGA+AGG + chr8_1:80663334-80663353 None:intergenic 35.0%
TTCATCCAAACATACCCTTA+AGG - chr8_1:80663333-80663352 Msa1218110:intron 35.0%
AATCTCCCATTATCAGTGAA+AGG - chr8_1:80663545-80663564 Msa1218110:intron 35.0%
ATCTCCCATTATCAGTGAAA+GGG - chr8_1:80663546-80663565 Msa1218110:intron 35.0%
GATTCCCTTTCACTGATAAT+GGG + chr8_1:80663553-80663572 None:intergenic 35.0%
TGATTCCCTTTCACTGATAA+TGG + chr8_1:80663554-80663573 None:intergenic 35.0%
GTTATGACGAATTAGACTTG+TGG + chr8_1:80663582-80663601 None:intergenic 35.0%
TCATTTAAACTCTTAGGTGC+TGG - chr8_1:80663640-80663659 Msa1218110:intron 35.0%
!! AATTCTGAAGGAGCTTGTTT+TGG - chr8_1:80663822-80663841 Msa1218110:intron 35.0%
TTATGGGATTGAAGAAGCTA+GGG + chr8_1:80664009-80664028 None:intergenic 35.0%
TTTATGGGATTGAAGAAGCT+AGG + chr8_1:80664010-80664029 None:intergenic 35.0%
! TAACTTCCGGATTTTCAGAA+TGG - chr8_1:80664097-80664116 Msa1218110:CDS 35.0%
GGATGTAGTAATTGGAGTAA+AGG + chr8_1:80664130-80664149 None:intergenic 35.0%
AACAGTTGGGATGTAGTAAT+TGG + chr8_1:80664138-80664157 None:intergenic 35.0%
TTCATAGAAGCAAGTTCATC+AGG + chr8_1:80664175-80664194 None:intergenic 35.0%
GAAACTTCCAAGGTTTCAAT+TGG - chr8_1:80664330-80664349 Msa1218110:CDS 35.0%
AGAGGTTAAGGAAAATACAG+AGG + chr8_1:80664582-80664601 None:intergenic 35.0%
! TCTGTATTTTCCTTAACCTC+TGG - chr8_1:80664581-80664600 Msa1218110:intron 35.0%
AGAATGTAGGAGAACTGATA+CGG - chr8_1:80664732-80664751 Msa1218110:intron 35.0%
! GAACTGATACGGTCAAATTT+TGG - chr8_1:80664743-80664762 Msa1218110:intron 35.0%
ATAAATTCAATGGCACATGC+AGG - chr8_1:80664851-80664870 Msa1218110:intron 35.0%
TCTTGTGAATCTTCTGACTT+AGG + chr8_1:80664969-80664988 None:intergenic 35.0%
TAAGTCAGAAGATTCACAAG+AGG - chr8_1:80664968-80664987 Msa1218110:intron 35.0%
!! TTGTGGAAGGAAGCTTTAAA+AGG - chr8_1:80665068-80665087 Msa1218110:intron 35.0%
!! TGTGGAAGGAAGCTTTAAAA+GGG - chr8_1:80665069-80665088 Msa1218110:intron 35.0%
ATCATCATCCAACAGAATCA+TGG - chr8_1:80665142-80665161 Msa1218110:intron 35.0%
GAAAGAAACTGTATCTCAGA+TGG - chr8_1:80665370-80665389 Msa1218110:intron 35.0%
GACTACTAAGATACAATAGC+AGG + chr8_1:80665652-80665671 None:intergenic 35.0%
TATCTTAGTAGTCAGCCATA+TGG - chr8_1:80665659-80665678 Msa1218110:CDS 35.0%
TGAAAACCTGAGGTGTACTA+GGG + chr8_1:80658736-80658755 None:intergenic 40.0%
TTCTCCTTAGAACACAGCAA+TGG - chr8_1:80658779-80658798 Msa1218110:three_prime_UTR 40.0%
TGAAGGAACGAATTTGGTAG+TGG + chr8_1:80658886-80658905 None:intergenic 40.0%
!!! TGAGGTTTTGGCTTCTTTGA+AGG + chr8_1:80658903-80658922 None:intergenic 40.0%
! TTATCATCGGAGTGAGGTTT+TGG + chr8_1:80658915-80658934 None:intergenic 40.0%
TTGTCTTTATCATCGGAGTG+AGG + chr8_1:80658921-80658940 None:intergenic 40.0%
AAAAACAGTCTAGGCCTGTT+TGG + chr8_1:80659536-80659555 None:intergenic 40.0%
CTGAAAACAGCTTATGAACC+TGG - chr8_1:80659609-80659628 Msa1218110:CDS 40.0%
AGCCAGTTGAAACAGATGAT+TGG - chr8_1:80659742-80659761 Msa1218110:intron 40.0%
GGAAGATTCATGAGATTGCA+GGG - chr8_1:80660047-80660066 Msa1218110:CDS 40.0%
CATTACTTCTCGTGTTCTTC+AGG - chr8_1:80660075-80660094 Msa1218110:CDS 40.0%
GTTTCTTCGAGGCTGAAAAT+GGG + chr8_1:80660409-80660428 None:intergenic 40.0%
TGTTTCTTCGAGGCTGAAAA+TGG + chr8_1:80660410-80660429 None:intergenic 40.0%
GCATATTTGGCAGTTGTTCA+TGG - chr8_1:80660520-80660539 Msa1218110:intron 40.0%
AGCTATAAAGGTCCACAAAC+AGG + chr8_1:80660593-80660612 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr8_1:80660680-80660699 Msa1218110:intron 40.0%
TTACACAAGAGGTTGTTCCT+AGG + chr8_1:80660720-80660739 None:intergenic 40.0%
!!! TGCCCTGTTTTTTACACAAG+AGG + chr8_1:80660731-80660750 None:intergenic 40.0%
CTTGTGTAAAAAACAGGGCA+AGG - chr8_1:80660731-80660750 Msa1218110:intron 40.0%
TGCGTACAATACCAAAATGG+TGG - chr8_1:80660755-80660774 Msa1218110:intron 40.0%
GCGTACAATACCAAAATGGT+GGG - chr8_1:80660756-80660775 Msa1218110:intron 40.0%
!! TTCAAAGCTGTGGCTTGTTT+AGG - chr8_1:80660997-80661016 Msa1218110:intron 40.0%
CTTATCGCATTTCACTAGCA+AGG - chr8_1:80661083-80661102 Msa1218110:intron 40.0%
TGTTGAGCATGCATATGACT+TGG - chr8_1:80661275-80661294 Msa1218110:intron 40.0%
CTTAAACAACTGAAGCTCTG+TGG + chr8_1:80661343-80661362 None:intergenic 40.0%
CACAGAGCTTCAGTTGTTTA+AGG - chr8_1:80661341-80661360 Msa1218110:intron 40.0%
TTTACCTGGTTTCCTTCGTT+GGG + chr8_1:80661374-80661393 None:intergenic 40.0%
ATTTACCTGGTTTCCTTCGT+TGG + chr8_1:80661375-80661394 None:intergenic 40.0%
AGAATATGCCGTCATACTAC+GGG - chr8_1:80661675-80661694 Msa1218110:intron 40.0%
! TCCAAGTTGGGTCTACAAAA+AGG - chr8_1:80662038-80662057 Msa1218110:intron 40.0%
! TATCCTACACAGAGTCTTGT+TGG - chr8_1:80662127-80662146 Msa1218110:intron 40.0%
ATTCCAACAAGACTCTGTGT+AGG + chr8_1:80662133-80662152 None:intergenic 40.0%
TTGTTGCGGGAAAGAAAAAG+GGG + chr8_1:80662179-80662198 None:intergenic 40.0%
AAACCACAACGAATTGTTGC+GGG + chr8_1:80662192-80662211 None:intergenic 40.0%
TTGGATTATCTCTGCAACAG+AGG + chr8_1:80662281-80662300 None:intergenic 40.0%
!! GTAGTGGACTTGATAACACT+TGG + chr8_1:80662300-80662319 None:intergenic 40.0%
ACAAAGGATGGAGCCAAAAT+TGG - chr8_1:80662337-80662356 Msa1218110:intron 40.0%
TGTGAAATATGGGAATGCCA+AGG - chr8_1:80662369-80662388 Msa1218110:intron 40.0%
!! CATTTTGACCTAGTTCCAGA+AGG + chr8_1:80662676-80662695 None:intergenic 40.0%
!! CTTCTGGAACTAGGTCAAAA+TGG - chr8_1:80662674-80662693 Msa1218110:intron 40.0%
!! CAAAACACTTGGGCTTTGTT+TGG - chr8_1:80662750-80662769 Msa1218110:intron 40.0%
TATTGGAGGAGGGATTAGAA+GGG + chr8_1:80662957-80662976 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATC+AGG - chr8_1:80662980-80662999 Msa1218110:intron 40.0%
!! ACAAAATCCTCCTGATTTGG+GGG + chr8_1:80662993-80663012 None:intergenic 40.0%
GAAATAAAGGACTTCGAGAG+GGG + chr8_1:80663048-80663067 None:intergenic 40.0%
GGAGCAAGTGGATGAAATAA+AGG + chr8_1:80663061-80663080 None:intergenic 40.0%
!!! AGGGTTTTGGGAAAAAAGGA+AGG + chr8_1:80663082-80663101 None:intergenic 40.0%
! CTTTCTTTGGGAGTTTGGAA+GGG + chr8_1:80663110-80663129 None:intergenic 40.0%
! TAAGGCTTTCTTTGGGAGTT+TGG + chr8_1:80663115-80663134 None:intergenic 40.0%
AAACTCCCAAAGAAAGCCTT+AGG - chr8_1:80663114-80663133 Msa1218110:intron 40.0%
AACTCCCAAAGAAAGCCTTA+GGG - chr8_1:80663115-80663134 Msa1218110:intron 40.0%
! GTAAGCCTTAAGGGTATGTT+TGG + chr8_1:80663341-80663360 None:intergenic 40.0%
TAAGTCAGTAGACTGAACAG+TGG + chr8_1:80663429-80663448 None:intergenic 40.0%
TTGTATCGTCGACAACTGAA+AGG + chr8_1:80663673-80663692 None:intergenic 40.0%
CGAGCTTCAATCAATTCTGA+AGG - chr8_1:80663810-80663829 Msa1218110:intron 40.0%
! CGTCTTCCATTCTGAAAATC+CGG + chr8_1:80664106-80664125 None:intergenic 40.0%
TATACCTTCTCTGTCTCTCA+AGG - chr8_1:80664201-80664220 Msa1218110:intron 40.0%
!! CATTCATTTTGATCGCTGTC+AGG - chr8_1:80664281-80664300 Msa1218110:CDS 40.0%
! TTTCACTTTGCTGTCTTCCA+TGG + chr8_1:80664367-80664386 None:intergenic 40.0%
!! ACGGTCAAATTTTGGCAAAG+AGG - chr8_1:80664751-80664770 Msa1218110:intron 40.0%
TAAAGCTTCCTTCCACAAGA+TGG + chr8_1:80665066-80665085 None:intergenic 40.0%
AAATGTGAATTATGGGCCCA+TGG - chr8_1:80665092-80665111 Msa1218110:intron 40.0%
ACTTTGTGATTGCAGCTGTA+AGG - chr8_1:80665201-80665220 Msa1218110:intron 40.0%
!! CATTGGCTTGCTTGTTCTTT+GGG + chr8_1:80665328-80665347 None:intergenic 40.0%
!! TCATTGGCTTGCTTGTTCTT+TGG + chr8_1:80665329-80665348 None:intergenic 40.0%
! AAAATGATATAGGGGTGCGT+TGG + chr8_1:80665421-80665440 None:intergenic 40.0%
!! CGCACCCCTATATCATTTTT+CGG - chr8_1:80665422-80665441 Msa1218110:CDS 40.0%
!! GCACCCCTATATCATTTTTC+GGG - chr8_1:80665423-80665442 Msa1218110:CDS 40.0%
GAGCCCGAAAAATGATATAG+GGG + chr8_1:80665429-80665448 None:intergenic 40.0%
GGAGCCCGAAAAATGATATA+GGG + chr8_1:80665430-80665449 None:intergenic 40.0%
AGGAGCCCGAAAAATGATAT+AGG + chr8_1:80665431-80665450 None:intergenic 40.0%
! TTGTTGCTTCTGTCTGTGAT+TGG - chr8_1:80665711-80665730 Msa1218110:CDS 40.0%
CATAAACCCTAGTACACCTC+AGG - chr8_1:80658727-80658746 Msa1218110:three_prime_UTR 45.0%
CTGAAAACCTGAGGTGTACT+AGG + chr8_1:80658737-80658756 None:intergenic 45.0%
!! GTGTTCTAAGGAGAAAGAGG+AGG + chr8_1:80658774-80658793 None:intergenic 45.0%
!! GCTGTGTTCTAAGGAGAAAG+AGG + chr8_1:80658777-80658796 None:intergenic 45.0%
TCCTTAGAACACAGCAATGG+CGG - chr8_1:80658782-80658801 Msa1218110:three_prime_UTR 45.0%
ATTAGGAGCTTGCACGTCTA+TGG - chr8_1:80659849-80659868 Msa1218110:intron 45.0%
TTAGGAGCTTGCACGTCTAT+GGG - chr8_1:80659850-80659869 Msa1218110:intron 45.0%
GGGAAGATTCATGAGATTGC+AGG - chr8_1:80660046-80660065 Msa1218110:CDS 45.0%
GTGAACAGCATATGCACTGT+AGG + chr8_1:80660270-80660289 None:intergenic 45.0%
TTCAGCCTCGAAGAAACAAC+TGG - chr8_1:80660412-80660431 Msa1218110:intron 45.0%
! GGCTTTATCTCTACTCTTCG+TGG - chr8_1:80660437-80660456 Msa1218110:intron 45.0%
TACCAACTGATCCAACCATG+TGG + chr8_1:80660484-80660503 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+AGG - chr8_1:80660687-80660706 Msa1218110:intron 45.0%
GGCTGCGTACAATACCAAAA+TGG - chr8_1:80660752-80660771 Msa1218110:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr8_1:80660835-80660854 Msa1218110:intron 45.0%
CTGCGTACAATACACCAAAC+CGG - chr8_1:80660908-80660927 Msa1218110:intron 45.0%
GTACAATACACCAAACCGGA+GGG - chr8_1:80660912-80660931 Msa1218110:intron 45.0%
TTTGCTTCTGCGTTCTATGC+AGG + chr8_1:80661562-80661581 None:intergenic 45.0%
! GCCTTTTTGTAGACCCAACT+TGG + chr8_1:80662042-80662061 None:intergenic 45.0%
AGACTCTGTGTAGGATAGAG+TGG + chr8_1:80662124-80662143 None:intergenic 45.0%
TTTCCCGCAACAATTCGTTG+TGG - chr8_1:80662186-80662205 Msa1218110:CDS 45.0%
!! TTGGGCTTTGTTTGGGAGTT+TGG - chr8_1:80662758-80662777 Msa1218110:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr8_1:80662762-80662781 Msa1218110:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr8_1:80662763-80662782 Msa1218110:intron 45.0%
! TTTGGGGGGTGGGAAATTTT+AGG - chr8_1:80662797-80662816 Msa1218110:intron 45.0%
! TTGGGGGGTGGGAAATTTTA+GGG - chr8_1:80662798-80662817 Msa1218110:intron 45.0%
GTATTGGAGGAGGGATTAGA+AGG + chr8_1:80662958-80662977 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr8_1:80663073-80663092 None:intergenic 45.0%
!!! AGGGAGGGTTTTGGGAAAAA+AGG + chr8_1:80663086-80663105 None:intergenic 45.0%
TTTGGGAGTTTGGAAGGGAA+GGG + chr8_1:80663105-80663124 None:intergenic 45.0%
! GCTTTCTTTGGGAGTTTGGA+AGG + chr8_1:80663111-80663130 None:intergenic 45.0%
TGGACCCTAAGGCTTTCTTT+GGG + chr8_1:80663122-80663141 None:intergenic 45.0%
ATGGACCCTAAGGCTTTCTT+TGG + chr8_1:80663123-80663142 None:intergenic 45.0%
GAAAGCCTTAGGGTCCATTT+CGG - chr8_1:80663125-80663144 Msa1218110:intron 45.0%
! TCCATTTCGGAGAGGGTTTT+TGG - chr8_1:80663138-80663157 Msa1218110:intron 45.0%
TCCAAAAACCCTCTCCGAAA+TGG + chr8_1:80663142-80663161 None:intergenic 45.0%
!! ATTTCGGAGAGGGTTTTTGG+AGG - chr8_1:80663141-80663160 Msa1218110:intron 45.0%
!! TTTCGGAGAGGGTTTTTGGA+GGG - chr8_1:80663142-80663161 Msa1218110:intron 45.0%
ATGAAGGGTTTAGGAGAGGA+GGG + chr8_1:80663318-80663337 None:intergenic 45.0%
TTGGATGAAGGGTTTAGGAG+AGG + chr8_1:80663322-80663341 None:intergenic 45.0%
ATCGTCGACAACTGAAAGGA+TGG + chr8_1:80663669-80663688 None:intergenic 45.0%
!!! GAAGGAGCTTGTTTTGGACA+AGG - chr8_1:80663828-80663847 Msa1218110:intron 45.0%
CTGAAGTAGCGTGAACAGTT+GGG + chr8_1:80664151-80664170 None:intergenic 45.0%
ACTGAAGTAGCGTGAACAGT+TGG + chr8_1:80664152-80664171 None:intergenic 45.0%
GAAACCTTGAGAGACAGAGA+AGG + chr8_1:80664208-80664227 None:intergenic 45.0%
CTCTCAGACAGAAACTTCCA+AGG - chr8_1:80664320-80664339 Msa1218110:CDS 45.0%
ATCGTCGCCAATTGAAACCT+TGG + chr8_1:80664340-80664359 None:intergenic 45.0%
AATTGGCGACGATGATTCCA+TGG - chr8_1:80664347-80664366 Msa1218110:intron 45.0%
CTTTCTTTCCACTCTCAGCT+AGG + chr8_1:80664434-80664453 None:intergenic 45.0%
GAGTGGAAAGAAAGACCCAT+TGG - chr8_1:80664440-80664459 Msa1218110:intron 45.0%
AGAAAGACCCATTGGTCAGA+AGG - chr8_1:80664448-80664467 Msa1218110:CDS 45.0%
CAGGAGCTATTGATCAACAG+TGG - chr8_1:80664471-80664490 Msa1218110:CDS 45.0%
TGGCAAAGAGGTCATATACG+AGG - chr8_1:80664763-80664782 Msa1218110:intron 45.0%
GGGCATATTGCATCCAACTT+TGG - chr8_1:80664893-80664912 Msa1218110:intron 45.0%
CAAGAGATGCTATCGCTTTG+TGG + chr8_1:80664938-80664957 None:intergenic 45.0%
ACAAGATGGAAGCAAAGTCG+GGG + chr8_1:80665052-80665071 None:intergenic 45.0%
CACAAGATGGAAGCAAAGTC+GGG + chr8_1:80665053-80665072 None:intergenic 45.0%
CCACAAGATGGAAGCAAAGT+CGG + chr8_1:80665054-80665073 None:intergenic 45.0%
CTTTGCTTCCATCTTGTGGA+AGG - chr8_1:80665055-80665074 Msa1218110:intron 45.0%
CCTCTGTACCATGATTCTGT+TGG + chr8_1:80665153-80665172 None:intergenic 45.0%
CCAACAGAATCATGGTACAG+AGG - chr8_1:80665150-80665169 Msa1218110:intron 45.0%
TTGCTTGTTCTTTGGGCTGT+GGG + chr8_1:80665321-80665340 None:intergenic 45.0%
!!! CATTTTTCGGGCTCCTGTAA+CGG - chr8_1:80665435-80665454 Msa1218110:CDS 45.0%
!!! ATTTTTCGGGCTCCTGTAAC+GGG - chr8_1:80665436-80665455 Msa1218110:CDS 45.0%
CCAGAATAGAAACCCGTTAC+AGG + chr8_1:80665451-80665470 None:intergenic 45.0%
!! CCTGTAACGGGTTTCTATTC+TGG - chr8_1:80665448-80665467 Msa1218110:CDS 45.0%
GATACAATAGCAGGGTGTGT+AGG + chr8_1:80665643-80665662 None:intergenic 45.0%
GTAGTCAGCCATATGGTGTT+TGG - chr8_1:80665666-80665685 Msa1218110:CDS 45.0%
TTGCTTCTGTCTGTGATTGG+AGG - chr8_1:80665714-80665733 Msa1218110:CDS 45.0%
!! AAAAAAAATTAAAAAAAAGT+TGG + chr8_1:80661528-80661547 None:intergenic 5.0%
! TAGCATGGTGACGACGTTCA+CGG + chr8_1:80658965-80658984 None:intergenic 50.0%
TGAACGTCGTCACCATGCTA+AGG - chr8_1:80658965-80658984 Msa1218110:three_prime_UTR 50.0%
! CAACTTTTACCGTTGCGCCA+AGG + chr8_1:80660664-80660683 None:intergenic 50.0%
AGGTCACAGGTTCAAGTCCT+AGG - chr8_1:80660700-80660719 Msa1218110:CDS 50.0%
!! GAGCTTTAGACTTGGCGCAA+CGG - chr8_1:80660807-80660826 Msa1218110:intron 50.0%
CGTACAATACACCAAACCGG+AGG - chr8_1:80660911-80660930 Msa1218110:intron 50.0%
! CTAAAGCACCCACATGCAGA+GGG + chr8_1:80660951-80660970 None:intergenic 50.0%
! ACTAAAGCACCCACATGCAG+AGG + chr8_1:80660952-80660971 None:intergenic 50.0%
ATGTGGGTGCTTTAGTGCAC+CGG - chr8_1:80660956-80660975 Msa1218110:intron 50.0%
GGATGCGAGAAAGACTAGCA+AGG - chr8_1:80661018-80661037 Msa1218110:intron 50.0%
AGCAAGGAAGAGAGAGAGAG+CGG - chr8_1:80661034-80661053 Msa1218110:intron 50.0%
CTAGCAAGGAAGAGAGAGAG+CGG - chr8_1:80661032-80661051 Msa1218110:intron 50.0%
!! CTCTTGCTTTTGAGCAGCAC+TGG + chr8_1:80661301-80661320 None:intergenic 50.0%
TAAGGACCAAGTCCCAACGA+AGG - chr8_1:80661359-80661378 Msa1218110:intron 50.0%
TGGTTTCCTTCGTTGGGACT+TGG + chr8_1:80661368-80661387 None:intergenic 50.0%
AAGTCCCAACGAAGGAAACC+AGG - chr8_1:80661367-80661386 Msa1218110:intron 50.0%
TCTGCGTTCTATGCAGGTCT+TGG + chr8_1:80661556-80661575 None:intergenic 50.0%
!! CAATGTGGCCTTCTGGAACT+AGG - chr8_1:80662665-80662684 Msa1218110:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr8_1:80662761-80662780 Msa1218110:intron 50.0%
TTGAGTTCCCCCAAATCAGG+AGG - chr8_1:80662983-80663002 Msa1218110:intron 50.0%
TAAAGGACTTCGAGAGGGGA+GGG + chr8_1:80663044-80663063 None:intergenic 50.0%
ATAAAGGACTTCGAGAGGGG+AGG + chr8_1:80663045-80663064 None:intergenic 50.0%
! CTTTGGGAGTTTGGAAGGGA+AGG + chr8_1:80663106-80663125 None:intergenic 50.0%
CTTAGGGTCCATTTCGGAGA+GGG - chr8_1:80663131-80663150 Msa1218110:intron 50.0%
!! TTCGGAGAGGGTTTTTGGAG+GGG - chr8_1:80663143-80663162 Msa1218110:intron 50.0%
TTTGGAGGGGAGGACTTTGA+AGG - chr8_1:80663156-80663175 Msa1218110:CDS 50.0%
TTGGAGGGGAGGACTTTGAA+GGG - chr8_1:80663157-80663176 Msa1218110:CDS 50.0%
TGAAGGGTTTAGGAGAGGAG+GGG + chr8_1:80663317-80663336 None:intergenic 50.0%
GATGAAGGGTTTAGGAGAGG+AGG + chr8_1:80663319-80663338 None:intergenic 50.0%
GTCAGTAGACTGAACAGTGG+AGG + chr8_1:80663426-80663445 None:intergenic 50.0%
ATTGAAGAAGCTAGGGCAGG+AGG + chr8_1:80664002-80664021 None:intergenic 50.0%
GATACTGACCTAGCTGAGAG+TGG - chr8_1:80664423-80664442 Msa1218110:intron 50.0%
! GATCAACAGTGGACTTGCAG+AGG - chr8_1:80664482-80664501 Msa1218110:CDS 50.0%
! AACAGTGGACTTGCAGAGGT+CGG - chr8_1:80664486-80664505 Msa1218110:CDS 50.0%
AGGTCAGCAACCAGAGGTTA+AGG + chr8_1:80664594-80664613 None:intergenic 50.0%
TGAATCAGGTCAGCAACCAG+AGG + chr8_1:80664600-80664619 None:intergenic 50.0%
CCGACTTTGCTTCCATCTTG+TGG - chr8_1:80665051-80665070 Msa1218110:intron 50.0%
AATTATGGGCCCATGGTCAC+AGG - chr8_1:80665099-80665118 Msa1218110:intron 50.0%
TGAGACCTACCTGTGACCAT+GGG + chr8_1:80665111-80665130 None:intergenic 50.0%
ATGAGACCTACCTGTGACCA+TGG + chr8_1:80665112-80665131 None:intergenic 50.0%
CTTGCTTGTTCTTTGGGCTG+TGG + chr8_1:80665322-80665341 None:intergenic 50.0%
CAGAACGGCCAAACACCATA+TGG + chr8_1:80665677-80665696 None:intergenic 50.0%
CTCGCAGAGCTGAAAACCTG+AGG + chr8_1:80658746-80658765 None:intergenic 55.0%
GCCGCCATTGCTGTGTTCTA+AGG + chr8_1:80658786-80658805 None:intergenic 55.0%
ACGACGTTCACGGGCGTTAA+GGG + chr8_1:80658955-80658974 None:intergenic 55.0%
! AGCATGGTGACGACGTTCAC+GGG + chr8_1:80658964-80658983 None:intergenic 55.0%
GCCTCGAAGAAACAACTGGC+AGG - chr8_1:80660416-80660435 Msa1218110:intron 55.0%
!! GCCTGCCAGTTGTTTCTTCG+AGG + chr8_1:80660420-80660439 None:intergenic 55.0%
GGCGAAGAAGAGGAGCAACA+TGG + chr8_1:80660463-80660482 None:intergenic 55.0%
TGCTCCTCTTCTTCGCCACA+TGG - chr8_1:80660466-80660485 Msa1218110:intron 55.0%
CCAACCATGTGGCGAAGAAG+AGG + chr8_1:80660473-80660492 None:intergenic 55.0%
CCTCTTCTTCGCCACATGGT+TGG - chr8_1:80660470-80660489 Msa1218110:intron 55.0%
CGCCACATGGTTGGATCAGT+TGG - chr8_1:80660479-80660498 Msa1218110:intron 55.0%
GCTTGTTTAAGGGGGAGCCT+TGG - chr8_1:80660644-80660663 Msa1218110:intron 55.0%
CCTATGCAGGGTATGGGAAG+GGG + chr8_1:80660783-80660802 None:intergenic 55.0%
GCCTATGCAGGGTATGGGAA+GGG + chr8_1:80660784-80660803 None:intergenic 55.0%
CTTCCCATACCCTGCATAGG+CGG - chr8_1:80660783-80660802 Msa1218110:intron 55.0%
TTCCCATACCCTGCATAGGC+GGG - chr8_1:80660784-80660803 Msa1218110:intron 55.0%
TAAAGCTCCCCGCCTATGCA+GGG + chr8_1:80660795-80660814 None:intergenic 55.0%
!! TAGGCGGGGAGCTTTAGACT+TGG - chr8_1:80660799-80660818 Msa1218110:intron 55.0%
ACATGCAGAGGGTCTGGGAA+GGG + chr8_1:80660940-80660959 None:intergenic 55.0%
TTCCCAGACCCTCTGCATGT+GGG - chr8_1:80660940-80660959 Msa1218110:intron 55.0%
TGTGGGTGCTTTAGTGCACC+GGG - chr8_1:80660957-80660976 Msa1218110:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr8_1:80662766-80662785 Msa1218110:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr8_1:80662767-80662786 Msa1218110:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr8_1:80662768-80662787 Msa1218110:intron 55.0%
! TTCGAGAGGGGAGGGTTTTG+GGG + chr8_1:80663036-80663055 None:intergenic 55.0%
! CTTCGAGAGGGGAGGGTTTT+GGG + chr8_1:80663037-80663056 None:intergenic 55.0%
! ACTTCGAGAGGGGAGGGTTT+TGG + chr8_1:80663038-80663057 None:intergenic 55.0%
! GGAAGGGAAGGGAGGGTTTT+GGG + chr8_1:80663094-80663113 None:intergenic 55.0%
! TGGAAGGGAAGGGAGGGTTT+TGG + chr8_1:80663095-80663114 None:intergenic 55.0%
GGAGTTTGGAAGGGAAGGGA+GGG + chr8_1:80663101-80663120 None:intergenic 55.0%
CCTCTCCGAAATGGACCCTA+AGG + chr8_1:80663133-80663152 None:intergenic 55.0%
CCTTAGGGTCCATTTCGGAG+AGG - chr8_1:80663130-80663149 Msa1218110:intron 55.0%
GGGATTGAAGAAGCTAGGGC+AGG + chr8_1:80664005-80664024 None:intergenic 55.0%
AGACCCATTGGTCAGAAGGC+AGG - chr8_1:80664452-80664471 Msa1218110:CDS 55.0%
GCTCCTGCCTTCTGACCAAT+GGG + chr8_1:80664458-80664477 None:intergenic 55.0%
AGCTCCTGCCTTCTGACCAA+TGG + chr8_1:80664459-80664478 None:intergenic 55.0%
GGCGGCGAAGAAGCAACAAG+AGG - chr8_1:80658800-80658819 Msa1218110:three_prime_UTR 60.0%
CGACGTTCACGGGCGTTAAG+GGG + chr8_1:80658954-80658973 None:intergenic 60.0%
GACGACGTTCACGGGCGTTA+AGG + chr8_1:80658956-80658975 None:intergenic 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr8_1:80660769-80660788 None:intergenic 60.0%
CCCCTTCCCATACCCTGCAT+AGG - chr8_1:80660780-80660799 Msa1218110:intron 60.0%
CGCCTATGCAGGGTATGGGA+AGG + chr8_1:80660785-80660804 None:intergenic 60.0%
TCCCATACCCTGCATAGGCG+GGG - chr8_1:80660785-80660804 Msa1218110:intron 60.0%
TCCCCGCCTATGCAGGGTAT+GGG + chr8_1:80660789-80660808 None:intergenic 60.0%
CTAAAGCTCCCCGCCTATGC+AGG + chr8_1:80660796-80660815 None:intergenic 60.0%
CATGCAGAGGGTCTGGGAAG+GGG + chr8_1:80660939-80660958 None:intergenic 60.0%
CACATGCAGAGGGTCTGGGA+AGG + chr8_1:80660941-80660960 None:intergenic 60.0%
CTTCCCAGACCCTCTGCATG+TGG - chr8_1:80660939-80660958 Msa1218110:intron 60.0%
CACCCACATGCAGAGGGTCT+GGG + chr8_1:80660945-80660964 None:intergenic 60.0%
GGGAGTTTGGAAGGGAAGGG+AGG + chr8_1:80663102-80663121 None:intergenic 60.0%
!! GGAGAGGGTTTTTGGAGGGG+AGG - chr8_1:80663146-80663165 Msa1218110:intron 60.0%
TGGCACATGCAGGTTGCGAC+AGG - chr8_1:80664861-80664880 Msa1218110:intron 60.0%
GGCACATGCAGGTTGCGACA+GGG - chr8_1:80664862-80664881 Msa1218110:intron 60.0%
GCACATGCAGGTTGCGACAG+GGG - chr8_1:80664863-80664882 Msa1218110:intron 60.0%
CACATGCAGGTTGCGACAGG+GGG - chr8_1:80664864-80664883 Msa1218110:intron 60.0%
GTTGCGACAGGGGGATCTGA+GGG - chr8_1:80664873-80664892 Msa1218110:intron 60.0%
ATGGGCCCATGGTCACAGGT+AGG - chr8_1:80665103-80665122 Msa1218110:intron 60.0%
AAGGGGGAGCCTTGGCGCAA+CGG - chr8_1:80660652-80660671 Msa1218110:intron 65.0%
CTCCCCGCCTATGCAGGGTA+TGG + chr8_1:80660790-80660809 None:intergenic 65.0%
GCACCCACATGCAGAGGGTC+TGG + chr8_1:80660946-80660965 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr8_1:80662772-80662791 Msa1218110:intron 65.0%
! GAGGGGAGGGGAGGGCTTTT+GGG - chr8_1:80662780-80662799 Msa1218110:intron 65.0%
! AGGGGAGGGGAGGGCTTTTG+GGG - chr8_1:80662781-80662800 Msa1218110:intron 65.0%
GGTTGCGACAGGGGGATCTG+AGG - chr8_1:80664872-80664891 Msa1218110:intron 65.0%
GGGAAGGGGTCCCTCCGGTT+TGG + chr8_1:80660925-80660944 None:intergenic 70.0%
GGTCTGGGAAGGGGTCCCTC+CGG + chr8_1:80660930-80660949 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr8_1:80662771-80662790 Msa1218110:intron 70.0%
! GGAGGGGAGGGGAGGGCTTT+TGG - chr8_1:80662779-80662798 Msa1218110:intron 70.0%
! GGGGAGGGGAGGGCTTTTGG+GGG - chr8_1:80662782-80662801 Msa1218110:intron 70.0%
! GGGAGGGGAGGGCTTTTGGG+GGG - chr8_1:80662783-80662802 Msa1218110:intron 70.0%
!! AGGGGAGGGCTTTTGGGGGG+TGG - chr8_1:80662786-80662805 Msa1218110:intron 70.0%
!! GGGGAGGGCTTTTGGGGGGT+GGG - chr8_1:80662787-80662806 Msa1218110:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80658712 80665831 80658712 ID=Msa1218110;Name=Msa1218110
chr8_1 mRNA 80658712 80665831 80658712 ID=Msa1218110-mRNA-1;Parent=Msa1218110;Name=Msa1218110-mRNA-1;_AED=0.27;_eAED=0.27;_QI=86|1|1|1|1|1|17|483|637
chr8_1 exon 80658712 80659327 80658712 ID=Msa1218110-mRNA-1:exon:28359;Parent=Msa1218110-mRNA-1
chr8_1 exon 80659423 80659670 80659423 ID=Msa1218110-mRNA-1:exon:28358;Parent=Msa1218110-mRNA-1
chr8_1 exon 80659759 80659833 80659759 ID=Msa1218110-mRNA-1:exon:28357;Parent=Msa1218110-mRNA-1
chr8_1 exon 80660040 80660240 80660040 ID=Msa1218110-mRNA-1:exon:28356;Parent=Msa1218110-mRNA-1
chr8_1 exon 80660321 80660428 80660321 ID=Msa1218110-mRNA-1:exon:28355;Parent=Msa1218110-mRNA-1
chr8_1 exon 80660694 80660744 80660694 ID=Msa1218110-mRNA-1:exon:28354;Parent=Msa1218110-mRNA-1
chr8_1 exon 80660837 80660887 80660837 ID=Msa1218110-mRNA-1:exon:28353;Parent=Msa1218110-mRNA-1
chr8_1 exon 80661983 80662054 80661983 ID=Msa1218110-mRNA-1:exon:28352;Parent=Msa1218110-mRNA-1
chr8_1 exon 80662153 80662266 80662153 ID=Msa1218110-mRNA-1:exon:28351;Parent=Msa1218110-mRNA-1
chr8_1 exon 80662371 80662521 80662371 ID=Msa1218110-mRNA-1:exon:28350;Parent=Msa1218110-mRNA-1
chr8_1 exon 80663155 80663269 80663155 ID=Msa1218110-mRNA-1:exon:28349;Parent=Msa1218110-mRNA-1
chr8_1 exon 80664043 80664126 80664043 ID=Msa1218110-mRNA-1:exon:28348;Parent=Msa1218110-mRNA-1
chr8_1 exon 80664229 80664352 80664229 ID=Msa1218110-mRNA-1:exon:28347;Parent=Msa1218110-mRNA-1
chr8_1 exon 80664447 80664528 80664447 ID=Msa1218110-mRNA-1:exon:28346;Parent=Msa1218110-mRNA-1
chr8_1 exon 80664628 80664689 80664628 ID=Msa1218110-mRNA-1:exon:28345;Parent=Msa1218110-mRNA-1
chr8_1 exon 80665415 80665468 80665415 ID=Msa1218110-mRNA-1:exon:28344;Parent=Msa1218110-mRNA-1
chr8_1 exon 80665557 80665831 80665557 ID=Msa1218110-mRNA-1:exon:28343;Parent=Msa1218110-mRNA-1
chr8_1 five_prime_UTR 80665746 80665831 80665746 ID=Msa1218110-mRNA-1:five_prime_utr;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80665557 80665745 80665557 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80665415 80665468 80665415 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80664628 80664689 80664628 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80664447 80664528 80664447 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80664229 80664352 80664229 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80664043 80664126 80664043 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80663155 80663269 80663155 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80662371 80662521 80662371 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80662153 80662266 80662153 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80661983 80662054 80661983 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80660837 80660887 80660837 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80660694 80660744 80660694 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80660321 80660428 80660321 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80660040 80660240 80660040 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80659759 80659833 80659759 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80659423 80659670 80659423 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 CDS 80659195 80659327 80659195 ID=Msa1218110-mRNA-1:cds;Parent=Msa1218110-mRNA-1
chr8_1 three_prime_UTR 80658712 80659194 80658712 ID=Msa1218110-mRNA-1:three_prime_utr;Parent=Msa1218110-mRNA-1
Gene Sequence

>Msa1218110

ATGGCGGCGAAGAAGCAACAAGAGGTAGACATCAAAAAGAGAAAGCGAATCGACACTAAAACTCCTTCTTCTAATCCGAAGAAATCCACTACCAAATTCGTTCCTTCAAAGAAGCCAAAACCTCACTCCGATGATAAAGACAAGAACAAAACTCCCCTTAACGCCCGTGAACGTCGTCACCATGCTAAGGAACTCACTGATGCTAGAAAACAGAAGAGAAGACGCCATTACACTCTTGAACAAGAGCTTGCACGTCTATGGGAAAAGATGAGACGTCACGAGATTGCTAAAGAAGACAGATCCAAGCTGGTGACAGAAGCTCTAACAAAAATGAAGGGGAAGATTCATGAGATTGCAGGGTCTCACATTACTTCTCGTGTTCTTCAGACTTGTGTTAAACATTGTTCACAAGCTGAAAGAGATCAAGTATTTGAAGAGCTTCGTCCGCATTTTCTAAATCTAGCCTACAGTGCATATGCTGTTCACTTAGTAAAGAAGATGCTTGACAATGCCTCGAAGAAACAACTGGCAGGCTTTATCTCTACTCTTCGTGGCCATGTTGCTCCTCTTCTTCGCCACATGGTTGGATCAGTTGTTGTTGAGCATGCATATGACTTGGCCAGTGCTGCTCAAAAGCAAGAGCTACTTTTGGAATTATATTCCACAGAGCTTCAGTTGTTTAAGGACCAAGTCCCAACGAAGGAAACCAGATTACTAGATGTAATGTCCAAGTTGGGTCTACAAAAAGGCTCAGTTTCACGTCATATGTCGAAAGTGATTCAGCCAATTTTAGAGAAAGGGATAGTTGACCACTCTATCCTACACAGAGTCTTGTTGGAATACTTTAGCATTGCTGATAAGACCTCTGTTGCAGAGATAATCCAAGTGTTATCAAGTCCACTACTTATCAGAATGATTGGTACAAAGGATGGAGCCAAAATTGGAATTCTTTGTGTGAAATATGGGAATGCCAAGGAAAGAAAGAAGATTATCAAAGGATTGAAAGGGCATATAGGAAAAACAGCTTATCATCAATATGGGTGTATGGTGCTGGTCTCCATCCTTTCAGTTGTCGACGATACAAAACTGATAACAAAGGTTATCATTCGCGAGCTTCAATCAATTCTGAAGGAGCTTGTTTTGGACAAGAATGGAAGACGTCCTTTACTCCAATTACTACATCCCAACTGTTCACGCTACTTCAGTCCTGATGAACTTGCTTCTATGAATTCATCTATACCTTCTCTGTCTCTCAAGGATCAGTCAGAAGCAAGCTCTCAGACAGAAACTTCCAAGGTTTCAATTGGCGACGATGATTCCATGGAAGACAGCAAAGTGAAAGTGCCCGAAGTTAATGAAGATAAAACTTCTGTGGATGATACTGACCTAGCTGAGAGTGGAAAGAAAGACCCATTGGTCAGAAGGCAGGAGCTATTGATCAACAGTGGACTTGCAGAGAGTCTTCTTGATATATGCATTGAGAATGTAGGAGAACTGATACGGTCAAATTTTGGCAAAGAGGTCATATACGAGGTTGCGACAGGGGGATCTGAGGGCATATTGCATCCAACTTTGGATGATAAGATTAATTCTCTCCACAAAGCGATAGCATCTCTTGCAGCAGTGCCTAAGTCAGAAGATTCACAAGAGGAGCACGTCCTTGAAAATTTCTTTTCAAATCGGACCATTAGAAAACTAATCTTGGACTGCCCCGACTTTGCTTCCATCTTGTGGAAGGAAGCTTTAAAAGGGAAATGTGAATTATGGGCCCATGGTCACAGCTGTAAGGTTATCACTGCATTTTTGGAATCAACAGATTCAAAGGTACAGAAGCTTGCAAAAAAAGAGTTGCAGCCTTTAATTGATAATGGAGTTCTCAAGAACCCACAGCCCAAAGAACAAGCAAGCCAATGA

Protein sequence

>Msa1218110

MAAKKQQEVDIKKRKRIDTKTPSSNPKKSTTKFVPSKKPKPHSDDKDKNKTPLNARERRHHAKELTDARKQKRRRHYTLEQELARLWEKMRRHEIAKEDRSKLVTEALTKMKGKIHEIAGSHITSRVLQTCVKHCSQAERDQVFEELRPHFLNLAYSAYAVHLVKKMLDNASKKQLAGFISTLRGHVAPLLRHMVGSVVVEHAYDLASAAQKQELLLELYSTELQLFKDQVPTKETRLLDVMSKLGLQKGSVSRHMSKVIQPILEKGIVDHSILHRVLLEYFSIADKTSVAEIIQVLSSPLLIRMIGTKDGAKIGILCVKYGNAKERKKIIKGLKGHIGKTAYHQYGCMVLVSILSVVDDTKLITKVIIRELQSILKELVLDKNGRRPLLQLLHPNCSRYFSPDELASMNSSIPSLSLKDQSEASSQTETSKVSIGDDDSMEDSKVKVPEVNEDKTSVDDTDLAESGKKDPLVRRQELLINSGLAESLLDICIENVGELIRSNFGKEVIYEVATGGSEGILHPTLDDKINSLHKAIASLAAVPKSEDSQEEHVLENFFSNRTIRKLILDCPDFASILWKEALKGKCELWAHGHSCKVITAFLESTDSKVQKLAKKELQPLIDNGVLKNPQPKEQASQ*