Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198640 | XP_003594554.1 | 96.899 | 258 | 7 | 1 | 1 | 257 | 1 | 258 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198640 | sp|O64587|ACD11_ARATH | 50.500 | 200 | 97 | 2 | 60 | 257 | 7 | 206 | 2.16e-74 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198640 | G7IKX4 | 96.899 | 258 | 7 | 1 | 1 | 257 | 1 | 258 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092410 | Msa0198640 | 0.823409 | 1.406589e-53 | -8.615850e-47 |
| Msa0133080 | Msa0198640 | 0.801355 | 9.364311e-49 | -8.615850e-47 |
| Msa0198640 | Msa0215590 | 0.848380 | 6.360429e-60 | -8.615850e-47 |
| Msa0198640 | Msa0217700 | 0.801231 | 9.926015e-49 | -8.615850e-47 |
| Msa0198640 | Msa0255850 | 0.840357 | 9.130176e-58 | -8.615850e-47 |
| Msa0198640 | Msa0264830 | 0.809171 | 2.159201e-50 | -8.615850e-47 |
| Msa0198640 | Msa0269560 | 0.809486 | 1.847876e-50 | -8.615850e-47 |
| Msa0198640 | Msa0282720 | 0.804371 | 2.230929e-49 | -8.615850e-47 |
| Msa0198640 | Msa0302870 | 0.801961 | 7.031484e-49 | -8.615850e-47 |
| Msa0198640 | Msa0318810 | 0.862926 | 3.584823e-64 | -8.615850e-47 |
| Msa0198640 | Msa0333650 | 0.849675 | 2.777045e-60 | -8.615850e-47 |
| Msa0198640 | Msa0340340 | 0.806548 | 7.799285e-50 | -8.615850e-47 |
| Msa0198640 | Msa0377800 | 0.821150 | 4.705963e-53 | -8.615850e-47 |
| Msa0198640 | Msa0426600 | 0.802440 | 5.603915e-49 | -8.615850e-47 |
| Msa0198640 | Msa0517570 | 0.820474 | 6.731141e-53 | -8.615850e-47 |
| Msa0198640 | Msa0574600 | 0.821592 | 3.719146e-53 | -8.615850e-47 |
| Msa0198640 | Msa0614920 | 0.810549 | 1.090611e-50 | -8.615850e-47 |
| Msa0198640 | Msa0708310 | 0.833300 | 5.773706e-56 | -8.615850e-47 |
| Msa0198640 | Msa0745070 | 0.853114 | 2.959843e-61 | -8.615850e-47 |
| Msa0198640 | Msa0825870 | 0.836642 | 8.302470e-57 | -8.615850e-47 |
| Msa0198640 | Msa0828240 | 0.802370 | 5.794823e-49 | -8.615850e-47 |
| Msa0198640 | Msa0865330 | 0.846498 | 2.091101e-59 | -8.615850e-47 |
| Msa0198640 | Msa0903990 | 0.804045 | 2.607473e-49 | -8.615850e-47 |
| Msa0198640 | Msa0936530 | 0.805839 | 1.099721e-49 | -8.615850e-47 |
| Msa0198640 | Msa1225100 | 0.809231 | 2.096351e-50 | -8.615850e-47 |
| Msa0198640 | Msa1236730 | 0.832221 | 1.069493e-55 | -8.615850e-47 |
| Msa0198640 | Msa1246700 | 0.860708 | 1.711093e-63 | -8.615850e-47 |
| Msa0198640 | Msa1269660 | 0.851217 | 1.024534e-60 | -8.615850e-47 |
| Msa0198640 | Msa1317130 | 0.835647 | 1.485645e-56 | -8.615850e-47 |
| Msa0198640 | Msa1329870 | 0.810079 | 1.377263e-50 | -8.615850e-47 |
| Msa0198640 | Msa1344890 | 0.834662 | 2.632690e-56 | -8.615850e-47 |
| Msa0198640 | Msa1353890 | 0.830973 | 2.172105e-55 | -8.615850e-47 |
| Msa0198640 | Msa1355890 | 0.818361 | 2.040367e-52 | -8.615850e-47 |
| Msa0198640 | Msa1365270 | 0.854486 | 1.192426e-61 | -8.615850e-47 |
| Msa0198640 | Msa1376450 | 0.863087 | 3.197245e-64 | -8.615850e-47 |
| Msa0198640 | Msa1391550 | 0.857539 | 1.523258e-62 | -8.615850e-47 |
| Msa0198640 | Msa1405220 | 0.812092 | 5.045729e-51 | -8.615850e-47 |
| Msa0198640 | Msa1418280 | 0.850511 | 1.619699e-60 | -8.615850e-47 |
| Msa0198640 | Msa1430550 | 0.825064 | 5.746520e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198640 | MtrunA17_Chr2g0292701 | 96.899 | 258 | 7 | 1 | 1 | 257 | 1 | 258 | 0.0 | 521 |
| Msa0198640 | MtrunA17_Chr2g0292061 | 55.779 | 199 | 86 | 1 | 61 | 257 | 77 | 275 | 6.71e-80 | 241 |
| Msa0198640 | MtrunA17_Chr1g0209981 | 38.308 | 201 | 118 | 1 | 63 | 257 | 14 | 214 | 2.98e-50 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198640 | AT2G34690.1 | 50.500 | 200 | 97 | 2 | 60 | 257 | 7 | 206 | 2.19e-75 | 228 |
| Msa0198640 | AT4G39670.1 | 39.109 | 202 | 116 | 1 | 63 | 257 | 28 | 229 | 4.93e-56 | 179 |
Find 53 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAAACATTACAATCTA+TGG | 0.217933 | 2_1:+17255731 | Msa0198640:CDS |
| TATGAAGGATGCAGTTTCTA+AGG | 0.268043 | 2_1:+17256700 | Msa0198640:CDS |
| CAGAGAGTAATCAATTTCTT+TGG | 0.272766 | 2_1:+17257127 | Msa0198640:three_prime_UTR |
| GAAAGCCAACACTACCAAAA+AGG | 0.279280 | 2_1:-17255179 | None:intergenic |
| GATCTTTCTTGAAAGAGAAT+TGG | 0.295495 | 2_1:+17257015 | Msa0198640:CDS |
| CTATATAGCTGCTGCTTTGT+AGG | 0.307812 | 2_1:-17256797 | None:intergenic |
| CTACAAAGCAGCAGCTATAT+AGG | 0.318496 | 2_1:+17256798 | Msa0198640:CDS |
| CTGATATATAAGTTTCCATT+AGG | 0.334458 | 2_1:-17256961 | None:intergenic |
| AGATTGGTGAACCTTCTAAA+TGG | 0.387866 | 2_1:+17257042 | Msa0198640:exon |
| ATCTTTCTTGAAAGAGAATT+GGG | 0.389564 | 2_1:+17257016 | Msa0198640:CDS |
| ATCTTCAGCAAAGGTCCTAA+TGG | 0.396822 | 2_1:+17256946 | Msa0198640:CDS |
| TATTTAATTCATATCATGGT+TGG | 0.402091 | 2_1:+17256735 | Msa0198640:CDS |
| CAGATATTTAATTCATATCA+TGG | 0.406954 | 2_1:+17256731 | Msa0198640:CDS |
| ATATAATATTTCTTCTATCA+TGG | 0.410725 | 2_1:+17254870 | Msa0198640:exon |
| TATATAGCTGCTGCTTTGTA+GGG | 0.411513 | 2_1:-17256796 | None:intergenic |
| CAACATGTACATCAGAGAAA+AGG | 0.414705 | 2_1:+17254904 | Msa0198640:CDS |
| AAAGAGAATTGGGTATAGAT+TGG | 0.416344 | 2_1:+17257026 | Msa0198640:CDS |
| CGTAATCCATCTCAATGAAC+TGG | 0.419032 | 2_1:-17255206 | None:intergenic |
| ATTTAATTCATATCATGGTT+GGG | 0.427704 | 2_1:+17256736 | Msa0198640:CDS |
| GAGTTCAAGTTCTGAAGGTT+CGG | 0.442457 | 2_1:-17254756 | None:intergenic |
| CAATGTATCGGAGTAGAGGC+GGG | 0.475755 | 2_1:-17256988 | None:intergenic |
| AGCAGCTATATAGGAAACTC+AGG | 0.479768 | 2_1:+17256807 | Msa0198640:CDS |
| AACATGTACATCAGAGAAAA+GGG | 0.482428 | 2_1:+17254905 | Msa0198640:CDS |
| TCATTTCCAGTTCATTGAGA+TGG | 0.485324 | 2_1:+17255200 | Msa0198640:CDS |
| AATGTATATATATGAAGATA+AGG | 0.495269 | 2_1:+17254813 | Msa0198640:five_prime_UTR |
| TCAGAAAGGCTGTTGCTGTA+AGG | 0.498928 | 2_1:+17256762 | Msa0198640:CDS |
| TATAGGAAACTCAGGGAAGA+TGG | 0.505472 | 2_1:+17256815 | Msa0198640:CDS |
| CGGAGGATATCGTAAGAAGA+AGG | 0.508974 | 2_1:+17255019 | Msa0198640:CDS |
| TGGCAGGGGAAATTCTATGA+AGG | 0.520911 | 2_1:+17256685 | Msa0198640:intron |
| CAGAAAAGAACAGCAGCAAT+CGG | 0.537826 | 2_1:+17254972 | Msa0198640:CDS |
| ACTAATTCTGTGAGAAAACA+AGG | 0.544198 | 2_1:+17255771 | Msa0198640:CDS |
| AAGATAAGGTGCAAACACTA+AGG | 0.557108 | 2_1:+17254827 | Msa0198640:five_prime_UTR |
| TCATGGTTGGGCTCTCAGAA+AGG | 0.563530 | 2_1:+17256748 | Msa0198640:CDS |
| TCAATGTATCGGAGTAGAGG+CGG | 0.573453 | 2_1:-17256989 | None:intergenic |
| GCAATGAGTTCAAGTTCTGA+AGG | 0.574219 | 2_1:-17254761 | None:intergenic |
| TGCTGTAGAATCTTCAGCAA+AGG | 0.582382 | 2_1:+17256937 | Msa0198640:intron |
| AGCTACGAAAGAACATGCAC+GGG | 0.611694 | 2_1:-17255154 | None:intergenic |
| GAGCTACGAAAGAACATGCA+CGG | 0.614772 | 2_1:-17255155 | None:intergenic |
| ATAGCTGCTGCTTTGTAGGG+AGG | 0.616762 | 2_1:-17256793 | None:intergenic |
| AATGTATCGGAGTAGAGGCG+GGG | 0.625612 | 2_1:-17256987 | None:intergenic |
| AAAGGGATTAAAGCATGTGG+TGG | 0.626095 | 2_1:+17254922 | Msa0198640:CDS |
| GGAGGATATCGTAAGAAGAA+GGG | 0.628279 | 2_1:+17255020 | Msa0198640:CDS |
| ACGTGGACTAGAATTTCTCA+AGG | 0.643065 | 2_1:+17255824 | Msa0198640:CDS |
| TGAGATGGATTACGTTACCA+AGG | 0.649858 | 2_1:+17255215 | Msa0198640:CDS |
| ATGTGTGTGAATGTGTTGAG+TGG | 0.664508 | 2_1:-17254786 | None:intergenic |
| GCAGCTATATAGGAAACTCA+GGG | 0.664510 | 2_1:+17256808 | Msa0198640:CDS |
| CGTCAACGAAAATATGATCG+AGG | 0.668624 | 2_1:+17255119 | Msa0198640:CDS |
| ACAGGTAAATGACATAGCAG+AGG | 0.670980 | 2_1:+17255698 | Msa0198640:intron |
| CTAATTCTGTGAGAAAACAA+GGG | 0.686956 | 2_1:+17255772 | Msa0198640:CDS |
| AGAAAAGGGATTAAAGCATG+TGG | 0.694132 | 2_1:+17254919 | Msa0198640:CDS |
| TGATCATGTCGACAACAACA+CGG | 0.696457 | 2_1:+17254999 | Msa0198640:CDS |
| GGATATCGTAAGAAGAAGGG+CGG | 0.701586 | 2_1:+17255023 | Msa0198640:CDS |
| TCATGTCGACAACAACACGG+AGG | 0.825209 | 2_1:+17255002 | Msa0198640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAAAACATTAATTA+AGG | - | chr2_1:17256004-17256023 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTTTTTGA+GGG | - | chr2_1:17256054-17256073 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTTTTTTTTTTG+AGG | - | chr2_1:17256055-17256074 | None:intergenic | 10.0% |
| !! | AAAATAAAAAAAATTGAAAG+TGG | + | chr2_1:17256398-17256417 | Msa0198640:intron | 10.0% |
| !! | AAAGTTAAAAACATTAATTA+AGG | - | chr2_1:17256004-17256023 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTTTTTGA+GGG | - | chr2_1:17256054-17256073 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTTTTTTTTTTG+AGG | - | chr2_1:17256055-17256074 | None:intergenic | 10.0% |
| !! | AAAATAAAAAAAATTGAAAG+TGG | + | chr2_1:17256398-17256417 | Msa0198640:intron | 10.0% |
| !! | AATGTATATATATGAAGATA+AGG | + | chr2_1:17254813-17254832 | Msa0198640:five_prime_UTR | 15.0% |
| !! | ATATAATATTTCTTCTATCA+TGG | + | chr2_1:17254870-17254889 | Msa0198640:exon | 15.0% |
| !!! | ATTAATAATGACTAGTTTAT+TGG | - | chr2_1:17255248-17255267 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCAAAAGATTTC+TGG | - | chr2_1:17255805-17255824 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTTTTAGTCCTT+GGG | - | chr2_1:17256390-17256409 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTTTAGTCCT+TGG | - | chr2_1:17256391-17256410 | None:intergenic | 15.0% |
| !! | AATACAATGAAAGAAAATAA+AGG | - | chr2_1:17256916-17256935 | None:intergenic | 15.0% |
| !! | AATGTATATATATGAAGATA+AGG | + | chr2_1:17254813-17254832 | Msa0198640:five_prime_UTR | 15.0% |
| !! | ATATAATATTTCTTCTATCA+TGG | + | chr2_1:17254870-17254889 | Msa0198640:exon | 15.0% |
| !!! | ATTAATAATGACTAGTTTAT+TGG | - | chr2_1:17255248-17255267 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCAAAAGATTTC+TGG | - | chr2_1:17255805-17255824 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTTTTAGTCCTT+GGG | - | chr2_1:17256390-17256409 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTTTAGTCCT+TGG | - | chr2_1:17256391-17256410 | None:intergenic | 15.0% |
| !! | AATACAATGAAAGAAAATAA+AGG | - | chr2_1:17256916-17256935 | None:intergenic | 15.0% |
| !! | AATGAATTATTCTAAATTCC+AGG | - | chr2_1:17255636-17255655 | None:intergenic | 20.0% |
| !! | TTTCAAAACATTACAATCTA+TGG | + | chr2_1:17255731-17255750 | Msa0198640:CDS | 20.0% |
| !!! | AATCTTTTGAAAATAAAACG+TGG | + | chr2_1:17255807-17255826 | Msa0198640:CDS | 20.0% |
| !!! | GATATATGCTTTTCATATTT+TGG | + | chr2_1:17255933-17255952 | Msa0198640:intron | 20.0% |
| !! | ATTAAGGATGTTAAAAGTAA+GGG | - | chr2_1:17255988-17256007 | None:intergenic | 20.0% |
| !! | AATTAAGGATGTTAAAAGTA+AGG | - | chr2_1:17255989-17256008 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGGGA+TGG | - | chr2_1:17256050-17256069 | None:intergenic | 20.0% |
| !! | TTAAAGATTACTATTCATCA+AGG | - | chr2_1:17256148-17256167 | None:intergenic | 20.0% |
| !! | AAAAATTGAAAGTGGAAAAT+TGG | + | chr2_1:17256406-17256425 | Msa0198640:intron | 20.0% |
| !! | CAGATATTTAATTCATATCA+TGG | + | chr2_1:17256731-17256750 | Msa0198640:CDS | 20.0% |
| !! | TATTTAATTCATATCATGGT+TGG | + | chr2_1:17256735-17256754 | Msa0198640:CDS | 20.0% |
| !! | ATTTAATTCATATCATGGTT+GGG | + | chr2_1:17256736-17256755 | Msa0198640:CDS | 20.0% |
| !!! | CATCATTTTAAATGTGTTTA+GGG | + | chr2_1:17256863-17256882 | Msa0198640:intron | 20.0% |
| !!! | AATAAAGAACTGTTTTTGTT+TGG | + | chr2_1:17257093-17257112 | Msa0198640:three_prime_UTR | 20.0% |
| !! | AATGAATTATTCTAAATTCC+AGG | - | chr2_1:17255636-17255655 | None:intergenic | 20.0% |
| !! | TTTCAAAACATTACAATCTA+TGG | + | chr2_1:17255731-17255750 | Msa0198640:CDS | 20.0% |
| !!! | AATCTTTTGAAAATAAAACG+TGG | + | chr2_1:17255807-17255826 | Msa0198640:CDS | 20.0% |
| !!! | GATATATGCTTTTCATATTT+TGG | + | chr2_1:17255933-17255952 | Msa0198640:intron | 20.0% |
| !! | ATTAAGGATGTTAAAAGTAA+GGG | - | chr2_1:17255988-17256007 | None:intergenic | 20.0% |
| !! | AATTAAGGATGTTAAAAGTA+AGG | - | chr2_1:17255989-17256008 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGGGA+TGG | - | chr2_1:17256050-17256069 | None:intergenic | 20.0% |
| !! | TTAAAGATTACTATTCATCA+AGG | - | chr2_1:17256148-17256167 | None:intergenic | 20.0% |
| !! | AAAAATTGAAAGTGGAAAAT+TGG | + | chr2_1:17256406-17256425 | Msa0198640:intron | 20.0% |
| !! | CAGATATTTAATTCATATCA+TGG | + | chr2_1:17256731-17256750 | Msa0198640:CDS | 20.0% |
| !! | TATTTAATTCATATCATGGT+TGG | + | chr2_1:17256735-17256754 | Msa0198640:CDS | 20.0% |
| !! | ATTTAATTCATATCATGGTT+GGG | + | chr2_1:17256736-17256755 | Msa0198640:CDS | 20.0% |
| !!! | CATCATTTTAAATGTGTTTA+GGG | + | chr2_1:17256863-17256882 | Msa0198640:intron | 20.0% |
| !!! | AATAAAGAACTGTTTTTGTT+TGG | + | chr2_1:17257093-17257112 | Msa0198640:three_prime_UTR | 20.0% |
| ! | CTTCAGATTAAAGACATATT+TGG | - | chr2_1:17255423-17255442 | None:intergenic | 25.0% |
| !! | TGTTTATGCAAGAGTATATA+TGG | + | chr2_1:17255482-17255501 | Msa0198640:intron | 25.0% |
| ! | TTGATTATCACATGATTTGA+TGG | + | chr2_1:17255670-17255689 | Msa0198640:intron | 25.0% |
| !!! | TTTTCAAAAGATTTCTGGAA+TGG | - | chr2_1:17255800-17255819 | None:intergenic | 25.0% |
| ! | CACCTTCAATAAAAAAATGT+CGG | + | chr2_1:17256329-17256348 | Msa0198640:intron | 25.0% |
| ! | AAGGTTAAAGAATTGTAAGT+GGG | - | chr2_1:17256447-17256466 | None:intergenic | 25.0% |
| ! | AAAGGTTAAAGAATTGTAAG+TGG | - | chr2_1:17256448-17256467 | None:intergenic | 25.0% |
| ! | CAAAAAAGACTACATTATTG+AGG | - | chr2_1:17256530-17256549 | None:intergenic | 25.0% |
| ! | CAAAAAAGACTACATTATTG+AGG | - | chr2_1:17256530-17256549 | None:intergenic | 25.0% |
| !! | CCTAAACACATTTAAAATGA+TGG | - | chr2_1:17256865-17256884 | None:intergenic | 25.0% |
| !! | CCATCATTTTAAATGTGTTT+AGG | + | chr2_1:17256862-17256881 | Msa0198640:intron | 25.0% |
| ! | CTGATATATAAGTTTCCATT+AGG | - | chr2_1:17256964-17256983 | None:intergenic | 25.0% |
| !! | GAAAGATCTTTTCAATGTAT+CGG | - | chr2_1:17257003-17257022 | None:intergenic | 25.0% |
| ! | ATCTTTCTTGAAAGAGAATT+GGG | + | chr2_1:17257016-17257035 | Msa0198640:CDS | 25.0% |
| ! | AAAAAACACATCCATTTAGA+AGG | - | chr2_1:17257056-17257075 | None:intergenic | 25.0% |
| !!! | ATTGAAAGAGCATCATTTTT+TGG | + | chr2_1:17257162-17257181 | Msa0198640:three_prime_UTR | 25.0% |
| ! | CTTCAGATTAAAGACATATT+TGG | - | chr2_1:17255423-17255442 | None:intergenic | 25.0% |
| !! | TGTTTATGCAAGAGTATATA+TGG | + | chr2_1:17255482-17255501 | Msa0198640:intron | 25.0% |
| ! | TTGATTATCACATGATTTGA+TGG | + | chr2_1:17255670-17255689 | Msa0198640:intron | 25.0% |
| !!! | TTTTCAAAAGATTTCTGGAA+TGG | - | chr2_1:17255800-17255819 | None:intergenic | 25.0% |
| ! | CACCTTCAATAAAAAAATGT+CGG | + | chr2_1:17256329-17256348 | Msa0198640:intron | 25.0% |
| ! | AAGGTTAAAGAATTGTAAGT+GGG | - | chr2_1:17256447-17256466 | None:intergenic | 25.0% |
| ! | AAAGGTTAAAGAATTGTAAG+TGG | - | chr2_1:17256448-17256467 | None:intergenic | 25.0% |
| ! | CAAAAAAGACTACATTATTG+AGG | - | chr2_1:17256530-17256549 | None:intergenic | 25.0% |
| ! | CAAAAAAGACTACATTATTG+AGG | - | chr2_1:17256530-17256549 | None:intergenic | 25.0% |
| !! | CCTAAACACATTTAAAATGA+TGG | - | chr2_1:17256865-17256884 | None:intergenic | 25.0% |
| !! | CCATCATTTTAAATGTGTTT+AGG | + | chr2_1:17256862-17256881 | Msa0198640:intron | 25.0% |
| ! | CTGATATATAAGTTTCCATT+AGG | - | chr2_1:17256964-17256983 | None:intergenic | 25.0% |
| !! | GAAAGATCTTTTCAATGTAT+CGG | - | chr2_1:17257003-17257022 | None:intergenic | 25.0% |
| ! | ATCTTTCTTGAAAGAGAATT+GGG | + | chr2_1:17257016-17257035 | Msa0198640:CDS | 25.0% |
| ! | AAAAAACACATCCATTTAGA+AGG | - | chr2_1:17257056-17257075 | None:intergenic | 25.0% |
| AACATGTACATCAGAGAAAA+GGG | + | chr2_1:17254905-17254924 | Msa0198640:CDS | 30.0% | |
| ACTTACTAATACATAGACGA+CGG | + | chr2_1:17255314-17255333 | Msa0198640:intron | 30.0% | |
| ! | ATGTCTTTAATCTGAAGTGT+TGG | + | chr2_1:17255426-17255445 | Msa0198640:intron | 30.0% |
| ! | ACAAACATGGATTTTATGCA+AGG | + | chr2_1:17255453-17255472 | Msa0198640:intron | 30.0% |
| ! | CATGATTTGATGGTAATAAC+AGG | + | chr2_1:17255680-17255699 | Msa0198640:intron | 30.0% |
| ACTAATTCTGTGAGAAAACA+AGG | + | chr2_1:17255771-17255790 | Msa0198640:CDS | 30.0% | |
| CTAATTCTGTGAGAAAACAA+GGG | + | chr2_1:17255772-17255791 | Msa0198640:CDS | 30.0% | |
| !! | TTTTTATTGAAGGTGTGTCT+CGG | - | chr2_1:17256324-17256343 | None:intergenic | 30.0% |
| !!! | CACCGACATTTTTTTATTGA+AGG | - | chr2_1:17256334-17256353 | None:intergenic | 30.0% |
| TTTAACCTTTAGTGCAAAGA+GGG | + | chr2_1:17256458-17256477 | Msa0198640:intron | 30.0% | |
| CAAAAGTCAATATTAGTCCA+AGG | - | chr2_1:17256501-17256520 | None:intergenic | 30.0% | |
| !!! | GTTGAAGACAAGTTTTGATT+AGG | + | chr2_1:17256549-17256568 | Msa0198640:intron | 30.0% |
| !!! | AGACAAGTTTTGATTAGGTT+TGG | + | chr2_1:17256554-17256573 | Msa0198640:intron | 30.0% |
| !!! | GTTGAAGACAAGTTTTGATT+AGG | + | chr2_1:17256549-17256568 | Msa0198640:intron | 30.0% |
| !!! | AGACAAGTTTTGATTAGGTT+TGG | + | chr2_1:17256554-17256573 | Msa0198640:intron | 30.0% |
| !!! | GTTCCAATGTGTGTTTTTTT+TGG | + | chr2_1:17256665-17256684 | Msa0198640:intron | 30.0% |
| !!! | AATGTGTGTTTTTTTTGGCA+GGG | + | chr2_1:17256670-17256689 | Msa0198640:intron | 30.0% |
| GATCTTTCTTGAAAGAGAAT+TGG | + | chr2_1:17257015-17257034 | Msa0198640:CDS | 30.0% | |
| AAAGAGAATTGGGTATAGAT+TGG | + | chr2_1:17257026-17257045 | Msa0198640:CDS | 30.0% | |
| CAGAGAGTAATCAATTTCTT+TGG | + | chr2_1:17257127-17257146 | Msa0198640:three_prime_UTR | 30.0% | |
| AACATGTACATCAGAGAAAA+GGG | + | chr2_1:17254905-17254924 | Msa0198640:CDS | 30.0% | |
| ACTTACTAATACATAGACGA+CGG | + | chr2_1:17255314-17255333 | Msa0198640:intron | 30.0% | |
| ! | ATGTCTTTAATCTGAAGTGT+TGG | + | chr2_1:17255426-17255445 | Msa0198640:intron | 30.0% |
| ! | ACAAACATGGATTTTATGCA+AGG | + | chr2_1:17255453-17255472 | Msa0198640:intron | 30.0% |
| ! | CATGATTTGATGGTAATAAC+AGG | + | chr2_1:17255680-17255699 | Msa0198640:intron | 30.0% |
| ACTAATTCTGTGAGAAAACA+AGG | + | chr2_1:17255771-17255790 | Msa0198640:CDS | 30.0% | |
| CTAATTCTGTGAGAAAACAA+GGG | + | chr2_1:17255772-17255791 | Msa0198640:CDS | 30.0% | |
| !! | TTTTTATTGAAGGTGTGTCT+CGG | - | chr2_1:17256324-17256343 | None:intergenic | 30.0% |
| !!! | CACCGACATTTTTTTATTGA+AGG | - | chr2_1:17256334-17256353 | None:intergenic | 30.0% |
| TTTAACCTTTAGTGCAAAGA+GGG | + | chr2_1:17256458-17256477 | Msa0198640:intron | 30.0% | |
| CAAAAGTCAATATTAGTCCA+AGG | - | chr2_1:17256501-17256520 | None:intergenic | 30.0% | |
| !!! | GTTGAAGACAAGTTTTGATT+AGG | + | chr2_1:17256549-17256568 | Msa0198640:intron | 30.0% |
| !!! | AGACAAGTTTTGATTAGGTT+TGG | + | chr2_1:17256554-17256573 | Msa0198640:intron | 30.0% |
| !!! | GTTGAAGACAAGTTTTGATT+AGG | + | chr2_1:17256549-17256568 | Msa0198640:intron | 30.0% |
| !!! | AGACAAGTTTTGATTAGGTT+TGG | + | chr2_1:17256554-17256573 | Msa0198640:intron | 30.0% |
| !!! | GTTCCAATGTGTGTTTTTTT+TGG | + | chr2_1:17256665-17256684 | Msa0198640:intron | 30.0% |
| !!! | AATGTGTGTTTTTTTTGGCA+GGG | + | chr2_1:17256670-17256689 | Msa0198640:intron | 30.0% |
| GATCTTTCTTGAAAGAGAAT+TGG | + | chr2_1:17257015-17257034 | Msa0198640:CDS | 30.0% | |
| AAAGAGAATTGGGTATAGAT+TGG | + | chr2_1:17257026-17257045 | Msa0198640:CDS | 30.0% | |
| CAGAGAGTAATCAATTTCTT+TGG | + | chr2_1:17257127-17257146 | Msa0198640:three_prime_UTR | 30.0% | |
| AAGATAAGGTGCAAACACTA+AGG | + | chr2_1:17254827-17254846 | Msa0198640:five_prime_UTR | 35.0% | |
| CAACATGTACATCAGAGAAA+AGG | + | chr2_1:17254904-17254923 | Msa0198640:CDS | 35.0% | |
| AGAAAAGGGATTAAAGCATG+TGG | + | chr2_1:17254919-17254938 | Msa0198640:CDS | 35.0% | |
| AAAGCCAACACTACCAAAAA+GGG | - | chr2_1:17255181-17255200 | None:intergenic | 35.0% | |
| TCATTTCCAGTTCATTGAGA+TGG | + | chr2_1:17255200-17255219 | Msa0198640:CDS | 35.0% | |
| ! | AGTTTATTGGTAGCTTACCT+TGG | - | chr2_1:17255235-17255254 | None:intergenic | 35.0% |
| !! | AAGTGTTGGTAACACAAACA+TGG | + | chr2_1:17255440-17255459 | Msa0198640:intron | 35.0% |
| AAACACTGACACACATCAAA+TGG | - | chr2_1:17255908-17255927 | None:intergenic | 35.0% | |
| !!! | TGCTACTGAGGTTTTAAACT+TGG | + | chr2_1:17256352-17256371 | Msa0198640:intron | 35.0% |
| CTTTAACCTTTAGTGCAAAG+AGG | + | chr2_1:17256457-17256476 | Msa0198640:intron | 35.0% | |
| CTGCCAAAAAAAACACACAT+TGG | - | chr2_1:17256671-17256690 | None:intergenic | 35.0% | |
| !!! | CAATGTGTGTTTTTTTTGGC+AGG | + | chr2_1:17256669-17256688 | Msa0198640:intron | 35.0% |
| !!! | ATGTGTGTTTTTTTTGGCAG+GGG | + | chr2_1:17256671-17256690 | Msa0198640:intron | 35.0% |
| TATGAAGGATGCAGTTTCTA+AGG | + | chr2_1:17256700-17256719 | Msa0198640:CDS | 35.0% | |
| !! | TATATAGCTGCTGCTTTGTA+GGG | - | chr2_1:17256799-17256818 | None:intergenic | 35.0% |
| ! | TTTTCAATGTATCGGAGTAG+AGG | - | chr2_1:17256995-17257014 | None:intergenic | 35.0% |
| AGATTGGTGAACCTTCTAAA+TGG | + | chr2_1:17257042-17257061 | Msa0198640:exon | 35.0% | |
| AAGATAAGGTGCAAACACTA+AGG | + | chr2_1:17254827-17254846 | Msa0198640:five_prime_UTR | 35.0% | |
| CAACATGTACATCAGAGAAA+AGG | + | chr2_1:17254904-17254923 | Msa0198640:CDS | 35.0% | |
| AGAAAAGGGATTAAAGCATG+TGG | + | chr2_1:17254919-17254938 | Msa0198640:CDS | 35.0% | |
| AAAGCCAACACTACCAAAAA+GGG | - | chr2_1:17255181-17255200 | None:intergenic | 35.0% | |
| TCATTTCCAGTTCATTGAGA+TGG | + | chr2_1:17255200-17255219 | Msa0198640:CDS | 35.0% | |
| ! | AGTTTATTGGTAGCTTACCT+TGG | - | chr2_1:17255235-17255254 | None:intergenic | 35.0% |
| !! | AAGTGTTGGTAACACAAACA+TGG | + | chr2_1:17255440-17255459 | Msa0198640:intron | 35.0% |
| AAACACTGACACACATCAAA+TGG | - | chr2_1:17255908-17255927 | None:intergenic | 35.0% | |
| !!! | TGCTACTGAGGTTTTAAACT+TGG | + | chr2_1:17256352-17256371 | Msa0198640:intron | 35.0% |
| CTTTAACCTTTAGTGCAAAG+AGG | + | chr2_1:17256457-17256476 | Msa0198640:intron | 35.0% | |
| CTGCCAAAAAAAACACACAT+TGG | - | chr2_1:17256671-17256690 | None:intergenic | 35.0% | |
| !!! | CAATGTGTGTTTTTTTTGGC+AGG | + | chr2_1:17256669-17256688 | Msa0198640:intron | 35.0% |
| !!! | ATGTGTGTTTTTTTTGGCAG+GGG | + | chr2_1:17256671-17256690 | Msa0198640:intron | 35.0% |
| TATGAAGGATGCAGTTTCTA+AGG | + | chr2_1:17256700-17256719 | Msa0198640:CDS | 35.0% | |
| !! | TATATAGCTGCTGCTTTGTA+GGG | - | chr2_1:17256799-17256818 | None:intergenic | 35.0% |
| ! | TTTTCAATGTATCGGAGTAG+AGG | - | chr2_1:17256995-17257014 | None:intergenic | 35.0% |
| AGATTGGTGAACCTTCTAAA+TGG | + | chr2_1:17257042-17257061 | Msa0198640:exon | 35.0% | |
| !! | GAGTTCAAGTTCTGAAGGTT+CGG | - | chr2_1:17254759-17254778 | None:intergenic | 40.0% |
| ! | GCAATGAGTTCAAGTTCTGA+AGG | - | chr2_1:17254764-17254783 | None:intergenic | 40.0% |
| ATGTGTGTGAATGTGTTGAG+TGG | - | chr2_1:17254789-17254808 | None:intergenic | 40.0% | |
| AAAGGGATTAAAGCATGTGG+TGG | + | chr2_1:17254922-17254941 | Msa0198640:CDS | 40.0% | |
| CAGAAAAGAACAGCAGCAAT+CGG | + | chr2_1:17254972-17254991 | Msa0198640:CDS | 40.0% | |
| TGATCATGTCGACAACAACA+CGG | + | chr2_1:17254999-17255018 | Msa0198640:CDS | 40.0% | |
| GGAGGATATCGTAAGAAGAA+GGG | + | chr2_1:17255020-17255039 | Msa0198640:CDS | 40.0% | |
| CGTCAACGAAAATATGATCG+AGG | + | chr2_1:17255119-17255138 | Msa0198640:CDS | 40.0% | |
| AAGCCAACACTACCAAAAAG+GGG | - | chr2_1:17255180-17255199 | None:intergenic | 40.0% | |
| GAAAGCCAACACTACCAAAA+AGG | - | chr2_1:17255182-17255201 | None:intergenic | 40.0% | |
| CGTAATCCATCTCAATGAAC+TGG | - | chr2_1:17255209-17255228 | None:intergenic | 40.0% | |
| !! | TGAGATGGATTACGTTACCA+AGG | + | chr2_1:17255215-17255234 | Msa0198640:CDS | 40.0% |
| ! | CATGGATTTTATGCAAGGAG+AGG | + | chr2_1:17255458-17255477 | Msa0198640:intron | 40.0% |
| ACAGGTAAATGACATAGCAG+AGG | + | chr2_1:17255698-17255717 | Msa0198640:intron | 40.0% | |
| !! | ACGTGGACTAGAATTTCTCA+AGG | + | chr2_1:17255824-17255843 | Msa0198640:CDS | 40.0% |
| AGTCATCAGATGAGTTTCGT+TGG | - | chr2_1:17256086-17256105 | None:intergenic | 40.0% | |
| !!! | GAGACTTGTTTTAACCTGCA+CGG | + | chr2_1:17256186-17256205 | Msa0198640:intron | 40.0% |
| !! | AAAAAATGTCGGTGCTACTG+AGG | + | chr2_1:17256340-17256359 | Msa0198640:intron | 40.0% |
| !! | CTATATAGCTGCTGCTTTGT+AGG | - | chr2_1:17256800-17256819 | None:intergenic | 40.0% |
| CTACAAAGCAGCAGCTATAT+AGG | + | chr2_1:17256798-17256817 | Msa0198640:CDS | 40.0% | |
| AGCAGCTATATAGGAAACTC+AGG | + | chr2_1:17256807-17256826 | Msa0198640:CDS | 40.0% | |
| GCAGCTATATAGGAAACTCA+GGG | + | chr2_1:17256808-17256827 | Msa0198640:CDS | 40.0% | |
| TATAGGAAACTCAGGGAAGA+TGG | + | chr2_1:17256815-17256834 | Msa0198640:CDS | 40.0% | |
| TGCTGTAGAATCTTCAGCAA+AGG | + | chr2_1:17256937-17256956 | Msa0198640:intron | 40.0% | |
| ATCTTCAGCAAAGGTCCTAA+TGG | + | chr2_1:17256946-17256965 | Msa0198640:CDS | 40.0% | |
| !! | GAGTTCAAGTTCTGAAGGTT+CGG | - | chr2_1:17254759-17254778 | None:intergenic | 40.0% |
| ! | GCAATGAGTTCAAGTTCTGA+AGG | - | chr2_1:17254764-17254783 | None:intergenic | 40.0% |
| ATGTGTGTGAATGTGTTGAG+TGG | - | chr2_1:17254789-17254808 | None:intergenic | 40.0% | |
| AAAGGGATTAAAGCATGTGG+TGG | + | chr2_1:17254922-17254941 | Msa0198640:CDS | 40.0% | |
| CAGAAAAGAACAGCAGCAAT+CGG | + | chr2_1:17254972-17254991 | Msa0198640:CDS | 40.0% | |
| TGATCATGTCGACAACAACA+CGG | + | chr2_1:17254999-17255018 | Msa0198640:CDS | 40.0% | |
| GGAGGATATCGTAAGAAGAA+GGG | + | chr2_1:17255020-17255039 | Msa0198640:CDS | 40.0% | |
| CGTCAACGAAAATATGATCG+AGG | + | chr2_1:17255119-17255138 | Msa0198640:CDS | 40.0% | |
| AAGCCAACACTACCAAAAAG+GGG | - | chr2_1:17255180-17255199 | None:intergenic | 40.0% | |
| GAAAGCCAACACTACCAAAA+AGG | - | chr2_1:17255182-17255201 | None:intergenic | 40.0% | |
| CGTAATCCATCTCAATGAAC+TGG | - | chr2_1:17255209-17255228 | None:intergenic | 40.0% | |
| !! | TGAGATGGATTACGTTACCA+AGG | + | chr2_1:17255215-17255234 | Msa0198640:CDS | 40.0% |
| ! | CATGGATTTTATGCAAGGAG+AGG | + | chr2_1:17255458-17255477 | Msa0198640:intron | 40.0% |
| ACAGGTAAATGACATAGCAG+AGG | + | chr2_1:17255698-17255717 | Msa0198640:intron | 40.0% | |
| !! | ACGTGGACTAGAATTTCTCA+AGG | + | chr2_1:17255824-17255843 | Msa0198640:CDS | 40.0% |
| AGTCATCAGATGAGTTTCGT+TGG | - | chr2_1:17256086-17256105 | None:intergenic | 40.0% | |
| !!! | GAGACTTGTTTTAACCTGCA+CGG | + | chr2_1:17256186-17256205 | Msa0198640:intron | 40.0% |
| !! | AAAAAATGTCGGTGCTACTG+AGG | + | chr2_1:17256340-17256359 | Msa0198640:intron | 40.0% |
| !! | CTATATAGCTGCTGCTTTGT+AGG | - | chr2_1:17256800-17256819 | None:intergenic | 40.0% |
| CTACAAAGCAGCAGCTATAT+AGG | + | chr2_1:17256798-17256817 | Msa0198640:CDS | 40.0% | |
| AGCAGCTATATAGGAAACTC+AGG | + | chr2_1:17256807-17256826 | Msa0198640:CDS | 40.0% | |
| GCAGCTATATAGGAAACTCA+GGG | + | chr2_1:17256808-17256827 | Msa0198640:CDS | 40.0% | |
| TATAGGAAACTCAGGGAAGA+TGG | + | chr2_1:17256815-17256834 | Msa0198640:CDS | 40.0% | |
| TGCTGTAGAATCTTCAGCAA+AGG | + | chr2_1:17256937-17256956 | Msa0198640:intron | 40.0% | |
| ATCTTCAGCAAAGGTCCTAA+TGG | + | chr2_1:17256946-17256965 | Msa0198640:CDS | 40.0% | |
| !! | CTGCTGTTCTTTTCTGGCAT+TGG | - | chr2_1:17254968-17254987 | None:intergenic | 45.0% |
| ! | CGATTGCTGCTGTTCTTTTC+TGG | - | chr2_1:17254974-17254993 | None:intergenic | 45.0% |
| CGGAGGATATCGTAAGAAGA+AGG | + | chr2_1:17255019-17255038 | Msa0198640:CDS | 45.0% | |
| GGATATCGTAAGAAGAAGGG+CGG | + | chr2_1:17255023-17255042 | Msa0198640:CDS | 45.0% | |
| !! | CTTTTCATCGACTGCTGTCA+TGG | - | chr2_1:17255052-17255071 | None:intergenic | 45.0% |
| AGCTACGAAAGAACATGCAC+GGG | - | chr2_1:17255157-17255176 | None:intergenic | 45.0% | |
| GAGCTACGAAAGAACATGCA+CGG | - | chr2_1:17255158-17255177 | None:intergenic | 45.0% | |
| ! | TCTTTCGTAGCTCCCCTTTT+TGG | + | chr2_1:17255165-17255184 | Msa0198640:CDS | 45.0% |
| ! | AGGGTGATAGTGACATGCTT+TGG | - | chr2_1:17255969-17255988 | None:intergenic | 45.0% |
| TTGAGGGATGGTTCAGTCAT+TGG | - | chr2_1:17256038-17256057 | None:intergenic | 45.0% | |
| !! | ATCTGTGTCGTTTCCAACGT+CGG | - | chr2_1:17256221-17256240 | None:intergenic | 45.0% |
| CGACACAGATACTAACACGT+TGG | + | chr2_1:17256231-17256250 | Msa0198640:intron | 45.0% | |
| TGGCAGGGGAAATTCTATGA+AGG | + | chr2_1:17256685-17256704 | Msa0198640:intron | 45.0% | |
| TCAGAAAGGCTGTTGCTGTA+AGG | + | chr2_1:17256762-17256781 | Msa0198640:CDS | 45.0% | |
| TCAATGTATCGGAGTAGAGG+CGG | - | chr2_1:17256992-17257011 | None:intergenic | 45.0% | |
| !! | CTGCTGTTCTTTTCTGGCAT+TGG | - | chr2_1:17254968-17254987 | None:intergenic | 45.0% |
| ! | CGATTGCTGCTGTTCTTTTC+TGG | - | chr2_1:17254974-17254993 | None:intergenic | 45.0% |
| CGGAGGATATCGTAAGAAGA+AGG | + | chr2_1:17255019-17255038 | Msa0198640:CDS | 45.0% | |
| GGATATCGTAAGAAGAAGGG+CGG | + | chr2_1:17255023-17255042 | Msa0198640:CDS | 45.0% | |
| !! | CTTTTCATCGACTGCTGTCA+TGG | - | chr2_1:17255052-17255071 | None:intergenic | 45.0% |
| AGCTACGAAAGAACATGCAC+GGG | - | chr2_1:17255157-17255176 | None:intergenic | 45.0% | |
| GAGCTACGAAAGAACATGCA+CGG | - | chr2_1:17255158-17255177 | None:intergenic | 45.0% | |
| ! | TCTTTCGTAGCTCCCCTTTT+TGG | + | chr2_1:17255165-17255184 | Msa0198640:CDS | 45.0% |
| ! | AGGGTGATAGTGACATGCTT+TGG | - | chr2_1:17255969-17255988 | None:intergenic | 45.0% |
| TTGAGGGATGGTTCAGTCAT+TGG | - | chr2_1:17256038-17256057 | None:intergenic | 45.0% | |
| !! | ATCTGTGTCGTTTCCAACGT+CGG | - | chr2_1:17256221-17256240 | None:intergenic | 45.0% |
| CGACACAGATACTAACACGT+TGG | + | chr2_1:17256231-17256250 | Msa0198640:intron | 45.0% | |
| TGGCAGGGGAAATTCTATGA+AGG | + | chr2_1:17256685-17256704 | Msa0198640:intron | 45.0% | |
| TCAGAAAGGCTGTTGCTGTA+AGG | + | chr2_1:17256762-17256781 | Msa0198640:CDS | 45.0% | |
| TCAATGTATCGGAGTAGAGG+CGG | - | chr2_1:17256992-17257011 | None:intergenic | 45.0% | |
| TCATGTCGACAACAACACGG+AGG | + | chr2_1:17255002-17255021 | Msa0198640:CDS | 50.0% | |
| !!! | GCTCCCCTTTTTGGTAGTGT+TGG | + | chr2_1:17255174-17255193 | Msa0198640:CDS | 50.0% |
| CACACGTGTCAGTATCGTGT+CGG | + | chr2_1:17256295-17256314 | Msa0198640:intron | 50.0% | |
| TTGGTGAGTCGCAAAACCCA+AGG | + | chr2_1:17256371-17256390 | Msa0198640:intron | 50.0% | |
| !! | CTGCGTGGAAAAAGTGTCCT+TGG | + | chr2_1:17256481-17256500 | Msa0198640:intron | 50.0% |
| TCATGGTTGGGCTCTCAGAA+AGG | + | chr2_1:17256748-17256767 | Msa0198640:CDS | 50.0% | |
| !! | ATAGCTGCTGCTTTGTAGGG+AGG | - | chr2_1:17256796-17256815 | None:intergenic | 50.0% |
| AATGTATCGGAGTAGAGGCG+GGG | - | chr2_1:17256990-17257009 | None:intergenic | 50.0% | |
| CAATGTATCGGAGTAGAGGC+GGG | - | chr2_1:17256991-17257010 | None:intergenic | 50.0% | |
| TCATGTCGACAACAACACGG+AGG | + | chr2_1:17255002-17255021 | Msa0198640:CDS | 50.0% | |
| !!! | GCTCCCCTTTTTGGTAGTGT+TGG | + | chr2_1:17255174-17255193 | Msa0198640:CDS | 50.0% |
| CACACGTGTCAGTATCGTGT+CGG | + | chr2_1:17256295-17256314 | Msa0198640:intron | 50.0% | |
| TTGGTGAGTCGCAAAACCCA+AGG | + | chr2_1:17256371-17256390 | Msa0198640:intron | 50.0% | |
| !! | CTGCGTGGAAAAAGTGTCCT+TGG | + | chr2_1:17256481-17256500 | Msa0198640:intron | 50.0% |
| TCATGGTTGGGCTCTCAGAA+AGG | + | chr2_1:17256748-17256767 | Msa0198640:CDS | 50.0% | |
| !! | ATAGCTGCTGCTTTGTAGGG+AGG | - | chr2_1:17256796-17256815 | None:intergenic | 50.0% |
| AATGTATCGGAGTAGAGGCG+GGG | - | chr2_1:17256990-17257009 | None:intergenic | 50.0% | |
| CAATGTATCGGAGTAGAGGC+GGG | - | chr2_1:17256991-17257010 | None:intergenic | 50.0% | |
| CGTTGACACACACACAGACC+TGG | + | chr2_1:17255615-17255634 | Msa0198640:intron | 55.0% | |
| ACGGACATAGTCACCGACGT+TGG | + | chr2_1:17256205-17256224 | Msa0198640:intron | 55.0% | |
| CGCAGCCCTCTTTGCACTAA+AGG | - | chr2_1:17256466-17256485 | None:intergenic | 55.0% | |
| TTAGTGCAAAGAGGGCTGCG+TGG | + | chr2_1:17256466-17256485 | Msa0198640:intron | 55.0% | |
| CGTTGACACACACACAGACC+TGG | + | chr2_1:17255615-17255634 | Msa0198640:intron | 55.0% | |
| ACGGACATAGTCACCGACGT+TGG | + | chr2_1:17256205-17256224 | Msa0198640:intron | 55.0% | |
| CGCAGCCCTCTTTGCACTAA+AGG | - | chr2_1:17256466-17256485 | None:intergenic | 55.0% | |
| TTAGTGCAAAGAGGGCTGCG+TGG | + | chr2_1:17256466-17256485 | Msa0198640:intron | 55.0% | |
| GTCGGTGACTATGTCCGTGC+AGG | - | chr2_1:17256203-17256222 | None:intergenic | 60.0% | |
| GTCGGTGACTATGTCCGTGC+AGG | - | chr2_1:17256203-17256222 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 17254738 | 17257183 | 17254738 | ID=Msa0198640;Name=Msa0198640 |
| chr2_1 | mRNA | 17254738 | 17257183 | 17254738 | ID=Msa0198640-mRNA-1;Parent=Msa0198640;Name=Msa0198640-mRNA-1;_AED=0.10;_eAED=0.10;_QI=151|1|1|1|1|1|4|132|257 |
| chr2_1 | exon | 17254738 | 17255236 | 17254738 | ID=Msa0198640-mRNA-1:exon:7260;Parent=Msa0198640-mRNA-1 |
| chr2_1 | exon | 17255702 | 17255874 | 17255702 | ID=Msa0198640-mRNA-1:exon:7261;Parent=Msa0198640-mRNA-1 |
| chr2_1 | exon | 17256691 | 17256836 | 17256691 | ID=Msa0198640-mRNA-1:exon:7262;Parent=Msa0198640-mRNA-1 |
| chr2_1 | exon | 17256945 | 17257183 | 17256945 | ID=Msa0198640-mRNA-1:exon:7263;Parent=Msa0198640-mRNA-1 |
| chr2_1 | five_prime_UTR | 17254738 | 17254888 | 17254738 | ID=Msa0198640-mRNA-1:five_prime_utr;Parent=Msa0198640-mRNA-1 |
| chr2_1 | CDS | 17254889 | 17255236 | 17254889 | ID=Msa0198640-mRNA-1:cds;Parent=Msa0198640-mRNA-1 |
| chr2_1 | CDS | 17255702 | 17255874 | 17255702 | ID=Msa0198640-mRNA-1:cds;Parent=Msa0198640-mRNA-1 |
| chr2_1 | CDS | 17256691 | 17256836 | 17256691 | ID=Msa0198640-mRNA-1:cds;Parent=Msa0198640-mRNA-1 |
| chr2_1 | CDS | 17256945 | 17257051 | 17256945 | ID=Msa0198640-mRNA-1:cds;Parent=Msa0198640-mRNA-1 |
| chr2_1 | three_prime_UTR | 17257052 | 17257183 | 17257052 | ID=Msa0198640-mRNA-1:three_prime_utr;Parent=Msa0198640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
