AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1317130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317130 MtrunA17_Chr8g0347251 92.857 350 19 3 1 346 1 348 0.0 622
Msa1317130 MtrunA17_Chr7g0275531 43.514 370 136 14 1 343 1 324 2.95e-77 240
Msa1317130 MtrunA17_Chr3g0126391 35.714 350 182 13 12 340 7 334 1.16e-51 174
Msa1317130 MtrunA17_Chr8g0387981 33.422 374 190 11 1 340 1 349 1.37e-49 169
Msa1317130 MtrunA17_Chr7g0244971 32.984 191 100 5 12 197 15 182 1.41e-22 95.9
Msa1317130 MtrunA17_Chr7g0244981 33.690 187 104 4 12 197 14 181 2.93e-22 94.7
Msa1317130 MtrunA17_Chr3g0128671 55.224 67 30 0 131 197 120 186 4.70e-20 89.4
Msa1317130 MtrunA17_Chr8g0350621 31.148 183 104 4 15 197 10 170 5.21e-19 85.5
Msa1317130 MtrunA17_Chr7g0270051 40.972 144 66 6 93 231 3 132 1.35e-18 84.3
Msa1317130 MtrunA17_Chr5g0428351 47.222 72 38 0 131 202 176 247 1.21e-17 82.4
Msa1317130 MtrunA17_Chr8g0334541 44.444 90 43 1 112 201 84 166 1.47e-17 81.6
Msa1317130 MtrunA17_Chr2g0315361 43.158 95 45 2 107 200 124 210 2.19e-17 81.6
Msa1317130 MtrunA17_Chr2g0315381 34.783 138 78 3 112 245 125 254 6.88e-17 80.1
Msa1317130 MtrunA17_Chr7g0224801 56.667 60 23 1 137 196 92 148 9.91e-17 77.0
Msa1317130 MtrunA17_Chr2g0315371 26.500 200 118 5 15 200 19 203 6.17e-16 77.4
Msa1317130 MtrunA17_Chr4g0071521 41.935 93 51 2 108 200 216 305 6.82e-16 77.4
Msa1317130 MtrunA17_Chr8g0387501 43.836 73 39 1 131 203 122 192 1.13e-15 76.3
Msa1317130 MtrunA17_Chr1g0147881 42.697 89 48 2 110 198 235 320 1.32e-15 77.0
Msa1317130 MtrunA17_Chr2g0293481 32.857 140 75 4 107 237 239 368 4.43e-15 76.3
Msa1317130 MtrunA17_Chr7g0270191 29.508 183 98 6 113 292 119 273 1.06e-14 73.6
Msa1317130 MtrunA17_Chr4g0042831 51.724 58 25 1 138 195 145 199 1.53e-14 73.9
Msa1317130 MtrunA17_Chr4g0042831 45.763 59 29 1 137 195 277 332 2.57e-11 64.3
Msa1317130 MtrunA17_Chr8g0379461 30.348 201 109 10 113 297 45 230 2.34e-14 72.0
Msa1317130 MtrunA17_Chr5g0401821 44.186 86 45 2 110 195 172 254 2.37e-14 72.4
Msa1317130 MtrunA17_Chr8g0386241 47.458 59 28 1 137 195 102 157 2.85e-14 70.5
Msa1317130 MtrunA17_Chr7g0249311 35.537 121 60 4 80 195 125 232 5.06e-14 73.2
Msa1317130 MtrunA17_Chr2g0284321 31.624 117 73 2 112 228 9 118 5.79e-14 70.1
Msa1317130 MtrunA17_Chr7g0248691 37.755 98 59 1 98 195 114 209 6.05e-14 71.6
Msa1317130 MtrunA17_Chr7g0218081 41.304 92 42 5 137 226 227 308 6.20e-14 72.8
Msa1317130 MtrunA17_Chr7g0218081 44.068 59 30 1 137 195 409 464 3.89e-11 63.9
Msa1317130 MtrunA17_Chr8g0348311 38.000 100 60 1 97 196 114 211 1.08e-13 71.2
Msa1317130 MtrunA17_Chr5g0431811 47.619 63 33 0 138 200 672 734 1.23e-13 72.4
Msa1317130 MtrunA17_Chr1g0202461 40.476 84 43 2 112 195 240 316 1.67e-13 70.9
Msa1317130 MtrunA17_Chr5g0443131 49.153 59 27 1 137 195 156 211 1.93e-13 70.1
Msa1317130 MtrunA17_Chr4g0053281 43.678 87 45 3 110 195 238 321 2.01e-13 70.5
Msa1317130 MtrunA17_Chr3g0079691 53.448 58 23 2 138 195 280 333 2.09e-13 71.2
Msa1317130 MtrunA17_Chr1g0194481 39.130 92 48 2 105 196 130 213 2.67e-13 69.7
Msa1317130 MtrunA17_Chr5g0418781 50.847 59 26 1 137 195 123 178 4.28e-13 68.9
Msa1317130 MtrunA17_Chr2g0294231 48.333 60 28 1 137 196 202 258 5.44e-13 69.3
Msa1317130 MtrunA17_Chr7g0238921 31.646 158 83 5 56 195 28 178 5.93e-13 68.9
Msa1317130 MtrunA17_Chr4g0051881 49.153 59 27 1 137 195 177 232 6.17e-13 68.9
Msa1317130 MtrunA17_Chr5g0445311 48.571 70 30 3 128 195 188 253 6.79e-13 69.7
Msa1317130 MtrunA17_Chr5g0445311 44.068 59 30 1 137 195 363 418 3.73e-11 64.3
Msa1317130 MtrunA17_Chr8g0383351 42.466 73 39 1 137 209 159 228 1.04e-12 67.0
Msa1317130 MtrunA17_Chr3g0101131 49.231 65 29 2 131 195 236 296 1.05e-12 68.9
Msa1317130 MtrunA17_Chr3g0101131 38.462 91 46 3 112 195 382 469 3.75e-11 64.3
Msa1317130 MtrunA17_Chr7g0270831 49.275 69 28 2 137 205 215 276 1.48e-12 68.2
Msa1317130 MtrunA17_Chr5g0418191 42.045 88 42 3 137 224 150 228 1.76e-12 68.2
Msa1317130 MtrunA17_Chr5g0418191 44.068 59 30 1 137 195 319 374 2.02e-11 64.7
Msa1317130 MtrunA17_Chr7g0248721 40.964 83 40 3 113 195 121 194 2.16e-12 65.9
Msa1317130 MtrunA17_Chr2g0288871 49.275 69 28 2 137 205 304 365 2.50e-12 67.8
Msa1317130 MtrunA17_Chr3g0129361 42.466 73 39 1 137 209 143 212 2.65e-12 65.5
Msa1317130 MtrunA17_Chr2g0322391 52.542 59 26 1 137 195 348 404 2.72e-12 67.8
Msa1317130 MtrunA17_Chr7g0263531 50.877 57 24 2 139 195 190 242 3.37e-12 67.0
Msa1317130 MtrunA17_Chr2g0319961 36.082 97 52 3 102 195 46 135 5.09e-12 65.5
Msa1317130 MtrunA17_Chr4g0075201 51.667 60 27 1 137 196 266 323 6.38e-12 66.6
Msa1317130 MtrunA17_Chr4g0068541 45.763 59 29 1 137 195 207 262 6.79e-12 66.2
Msa1317130 MtrunA17_Chr7g0228941 44.595 74 38 2 122 195 37 107 6.92e-12 62.0
Msa1317130 MtrunA17_Chr8g0335811 45.588 68 31 2 137 201 153 217 8.53e-12 64.3
Msa1317130 MtrunA17_Chr5g0447701 46.154 65 32 1 131 195 245 306 1.07e-11 65.5
Msa1317130 MtrunA17_Chr4g0004911 36.364 110 51 4 109 211 152 249 1.11e-11 65.9
Msa1317130 MtrunA17_Chr7g0243891 47.222 72 32 3 138 207 216 283 1.28e-11 65.5
Msa1317130 MtrunA17_Chr3g0139021 48.387 62 30 1 139 200 315 374 1.38e-11 65.1
Msa1317130 MtrunA17_Chr3g0136961 47.458 59 29 1 137 195 137 193 1.41e-11 64.3
Msa1317130 MtrunA17_Chr1g0184691 47.368 57 28 1 139 195 294 348 1.44e-11 65.1
Msa1317130 MtrunA17_Chr3g0106491 45.000 60 30 1 137 196 364 420 2.13e-11 65.1
Msa1317130 MtrunA17_Chr3g0106491 34.146 123 65 4 138 260 198 304 8.30e-11 63.2
Msa1317130 MtrunA17_Chr1g0150281 50.847 59 27 1 137 195 139 195 2.19e-11 63.9
Msa1317130 MtrunA17_Chr7g0249301 35.000 100 57 3 129 224 53 148 3.17e-11 63.9
Msa1317130 MtrunA17_Chr5g0432161 48.276 58 26 2 138 195 244 297 5.26e-11 63.9
Msa1317130 MtrunA17_Chr1g0150801 36.709 79 44 2 121 196 82 157 6.06e-11 60.5
Msa1317130 MtrunA17_Chr2g0333851 35.955 89 52 2 126 211 154 240 7.15e-11 62.4
Msa1317130 MtrunA17_Chr4g0051181 46.479 71 31 2 135 205 240 303 8.89e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317130 AT4G23810.1 37.931 232 106 6 2 205 4 225 1.78e-40 145
Msa1317130 AT5G24110.1 37.297 185 100 4 95 276 72 243 7.11e-39 140
Msa1317130 AT2G46400.1 35.125 279 135 8 8 274 4 248 1.03e-38 139
Msa1317130 AT4G11070.1 38.683 243 110 6 3 224 2 226 3.57e-38 139
Msa1317130 AT4G11070.2 51.493 134 58 3 95 224 64 194 3.68e-37 135
Msa1317130 AT2G40750.1 49.020 102 46 2 113 209 122 222 1.24e-23 100
Msa1317130 AT3G56400.1 30.435 207 119 3 6 208 5 190 1.97e-23 98.6
Msa1317130 AT2G40740.1 53.968 63 29 0 138 200 173 235 7.33e-20 89.0
Msa1317130 AT2G40740.3 53.968 63 29 0 138 200 182 244 8.93e-20 88.6
Msa1317130 AT5G45260.1 34.682 173 93 4 52 220 1129 1285 8.11e-19 88.6
Msa1317130 AT2G23320.1 35.897 117 64 3 79 195 190 295 1.96e-15 76.6
Msa1317130 AT4G24240.1 34.524 168 86 7 31 195 190 336 2.53e-15 76.6
Msa1317130 AT2G30590.1 40.404 99 52 3 110 208 286 377 6.26e-15 75.5
Msa1317130 AT4G31550.1 40.594 101 57 2 100 200 209 306 1.03e-14 74.3
Msa1317130 AT2G24570.1 41.121 107 57 3 110 213 216 319 1.43e-14 73.9
Msa1317130 AT5G52830.1 43.529 85 41 2 112 196 144 221 1.57e-14 74.3
Msa1317130 AT4G23550.1 33.051 118 72 2 104 221 106 216 1.74e-14 73.6
Msa1317130 AT2G03340.1 46.667 75 31 3 133 207 245 310 3.22e-14 73.9
Msa1317130 AT1G66550.1 32.335 167 97 4 51 214 33 186 3.30e-14 72.0
Msa1317130 AT4G31550.2 44.318 88 46 2 113 200 221 305 3.35e-14 72.8
Msa1317130 AT4G01250.1 44.048 84 39 2 112 195 108 183 3.50e-14 72.8
Msa1317130 AT5G28650.1 44.186 86 45 2 110 195 235 317 5.56e-14 72.4
Msa1317130 AT1G69310.4 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1317130 AT1G69310.2 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1317130 AT1G69310.1 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1317130 AT1G66550.2 43.590 78 42 1 139 214 104 181 7.68e-14 70.9
Msa1317130 AT3G58710.2 42.157 102 51 4 99 195 27 125 1.27e-13 70.5
Msa1317130 AT5G49520.1 48.333 60 28 1 137 196 220 276 1.33e-13 71.6
Msa1317130 AT1G29280.1 35.897 117 58 4 82 195 27 129 1.44e-13 70.1
Msa1317130 AT1G66600.1 39.726 73 44 0 125 197 90 162 1.47e-13 70.1
Msa1317130 AT2G34830.2 33.577 137 80 3 68 195 145 279 2.24e-13 71.2
Msa1317130 AT2G37260.3 40.244 82 46 1 114 195 245 323 2.27e-13 70.9
Msa1317130 AT2G37260.3 40.659 91 46 4 118 208 69 151 6.24e-12 66.2
Msa1317130 AT3G58710.1 40.196 102 54 3 99 195 27 126 2.27e-13 69.7
Msa1317130 AT2G34830.1 33.577 137 80 3 68 195 136 270 2.30e-13 71.2
Msa1317130 AT2G37260.2 40.244 82 46 1 114 195 243 321 2.55e-13 70.5
Msa1317130 AT2G37260.2 40.659 91 46 4 118 208 67 149 6.77e-12 66.2
Msa1317130 AT1G30650.1 40.449 89 48 2 107 195 189 272 2.66e-13 70.9
Msa1317130 AT4G18170.1 42.045 88 47 2 109 195 142 226 2.77e-13 70.1
Msa1317130 AT2G37260.1 40.244 82 46 1 114 195 325 403 2.89e-13 70.9
Msa1317130 AT2G37260.1 40.659 91 46 4 118 208 149 231 5.82e-12 67.0
Msa1317130 AT1G13960.1 46.575 73 30 3 137 209 228 291 3.00e-13 70.9
Msa1317130 AT1G13960.1 44.068 59 30 1 137 195 408 463 2.39e-11 65.1
Msa1317130 AT5G13080.1 50.000 60 27 1 137 196 66 122 3.39e-13 66.6
Msa1317130 AT4G01720.1 39.823 113 58 4 95 205 195 299 3.99e-13 70.5
Msa1317130 AT1G29860.1 40.909 88 43 3 123 209 120 199 4.26e-13 69.3
Msa1317130 AT3G04670.1 43.023 86 46 2 110 195 235 317 4.42e-13 69.7
Msa1317130 AT1G13960.2 46.575 73 30 3 137 209 75 138 4.76e-13 69.7
Msa1317130 AT1G13960.2 44.068 59 30 1 137 195 255 310 3.90e-11 63.9
Msa1317130 AT3G01970.1 50.000 60 27 1 137 196 64 120 5.19e-13 66.2
Msa1317130 AT1G66560.1 38.158 76 47 0 122 197 87 162 6.50e-13 68.2
Msa1317130 AT2G04880.2 47.458 59 28 1 137 195 282 337 7.11e-13 69.7
Msa1317130 AT2G04880.1 47.458 59 28 1 137 195 306 361 9.86e-13 69.3
Msa1317130 AT4G26640.7 38.889 90 39 3 137 226 340 413 2.02e-12 68.6
Msa1317130 AT4G26640.7 49.153 59 26 2 137 195 170 224 1.22e-11 66.2
Msa1317130 AT2G47260.1 40.476 84 47 1 137 220 173 253 2.02e-12 67.8
Msa1317130 AT3G01080.3 50.847 59 25 2 137 195 204 258 2.08e-12 67.8
Msa1317130 AT4G26440.1 42.045 88 41 4 137 224 177 254 2.27e-12 68.6
Msa1317130 AT4G26440.1 48.333 60 28 1 137 196 371 427 1.96e-11 65.5
Msa1317130 AT4G26640.2 38.889 90 39 3 137 226 380 453 2.37e-12 68.2
Msa1317130 AT4G26640.2 49.153 59 26 2 137 195 210 264 1.41e-11 65.9
Msa1317130 AT4G26640.1 38.889 90 39 3 137 226 308 381 2.43e-12 68.2
Msa1317130 AT4G26640.1 49.153 59 26 2 137 195 138 192 1.54e-11 65.9
Msa1317130 AT2G46130.1 47.458 59 28 1 137 195 29 84 2.64e-12 63.2
Msa1317130 AT4G26640.5 38.889 90 39 3 137 226 204 277 2.75e-12 67.8
Msa1317130 AT4G26640.5 49.153 59 26 2 137 195 34 88 1.68e-11 65.1
Msa1317130 AT4G26640.6 38.889 90 39 3 137 226 204 277 2.75e-12 67.8
Msa1317130 AT4G26640.6 49.153 59 26 2 137 195 34 88 1.68e-11 65.1
Msa1317130 AT4G26640.4 38.889 90 39 3 137 226 204 277 2.75e-12 67.8
Msa1317130 AT4G26640.4 49.153 59 26 2 137 195 34 88 1.68e-11 65.1
Msa1317130 AT4G26640.3 38.889 90 39 3 137 226 204 277 2.75e-12 67.8
Msa1317130 AT4G26640.3 49.153 59 26 2 137 195 34 88 1.68e-11 65.1
Msa1317130 AT2G25000.3 38.298 94 50 2 136 229 123 208 3.45e-12 66.2
Msa1317130 AT2G25000.2 38.298 94 50 2 136 229 101 186 3.62e-12 65.9
Msa1317130 AT2G25000.4 38.298 94 50 2 136 229 101 186 3.62e-12 65.9
Msa1317130 AT5G46350.1 37.363 91 47 3 137 225 182 264 3.96e-12 66.6
Msa1317130 AT3G01080.2 50.847 59 25 2 137 195 204 258 4.31e-12 67.4
Msa1317130 AT4G04450.2 49.275 69 28 2 137 205 197 258 4.83e-12 67.0
Msa1317130 AT4G39410.1 38.202 89 52 1 113 201 198 283 4.83e-12 66.2
Msa1317130 AT2G25000.1 38.298 94 50 2 136 229 144 229 4.91e-12 65.9
Msa1317130 AT5G56270.1 48.438 64 29 2 132 195 267 326 5.27e-12 67.4
Msa1317130 AT3G01080.1 50.847 59 25 2 137 195 166 220 5.33e-12 67.0
Msa1317130 AT2G30250.1 52.632 57 24 1 139 195 329 382 6.18e-12 66.6
Msa1317130 AT1G62300.1 49.275 69 28 2 137 205 311 372 6.72e-12 67.0
Msa1317130 AT4G04450.1 49.275 69 28 2 137 205 291 352 7.81e-12 66.6
Msa1317130 AT2G44745.1 47.458 59 28 1 137 195 144 199 9.17e-12 64.3
Msa1317130 AT4G22070.4 44.048 84 42 2 112 195 274 352 1.26e-11 66.2
Msa1317130 AT4G22070.3 44.048 84 42 2 112 195 274 352 1.26e-11 66.2
Msa1317130 AT4G22070.2 44.048 84 42 2 112 195 274 352 1.26e-11 66.2
Msa1317130 AT4G22070.1 44.048 84 42 2 112 195 274 352 1.26e-11 66.2
Msa1317130 AT1G80590.1 29.333 150 84 3 139 287 86 214 1.42e-11 63.9
Msa1317130 AT5G01900.1 45.763 59 32 0 139 197 111 169 5.21e-11 62.8
Msa1317130 AT4G12020.10 49.153 59 26 2 137 195 467 521 6.26e-11 64.3
Msa1317130 AT4G12020.3 49.153 59 26 2 137 195 467 521 6.26e-11 64.3
Msa1317130 AT4G12020.6 49.153 59 26 2 137 195 467 521 6.38e-11 64.3
Msa1317130 AT4G12020.8 49.153 59 26 2 137 195 467 521 6.38e-11 64.3
Msa1317130 AT5G15130.2 49.180 61 29 1 136 196 183 241 6.54e-11 63.9
Msa1317130 AT4G12020.4 49.153 59 26 2 137 195 467 521 6.73e-11 64.3
Msa1317130 AT4G12020.1 49.153 59 26 2 137 195 467 521 6.81e-11 64.3
Msa1317130 AT4G12020.9 49.153 59 26 2 137 195 467 521 6.81e-11 64.3
Msa1317130 AT1G80840.1 38.298 94 48 3 126 216 131 217 6.83e-11 62.8
Msa1317130 AT2G38470.1 51.724 58 24 2 138 195 184 237 6.83e-11 63.9
Msa1317130 AT4G12020.7 49.153 59 26 2 137 195 467 521 6.87e-11 64.3
Msa1317130 AT5G15130.1 49.180 61 29 1 136 196 225 283 6.89e-11 63.9
Msa1317130 AT4G12020.2 49.153 59 26 2 137 195 467 521 6.98e-11 64.3
Msa1317130 AT4G12020.5 49.153 59 26 2 137 195 400 454 7.33e-11 64.3
Msa1317130 AT1G68150.1 50.820 61 28 1 135 195 232 290 7.40e-11 63.2
Msa1317130 AT1G64000.1 45.763 59 29 1 137 195 113 168 7.88e-11 61.2
Msa1317130 AT3G62340.1 46.667 60 29 1 137 196 117 173 9.20e-11 62.4

Find 74 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGAATTGGCAATAGAATT+TGG 0.147921 8_4:-18207532 None:intergenic
GTAGATCAAGATTAGTAAAA+TGG 0.223332 8_4:+18207683 Msa1317130:three_prime_UTR
CTGCTTGTCACTATTGGATA+TGG 0.238656 8_4:+18207465 Msa1317130:CDS
TGAGTCTTGGACCTCACTTT+TGG 0.250506 8_4:-18205331 None:intergenic
ATGAGTGAGGAGGAGATATA+AGG 0.253287 8_4:-18204851 None:intergenic
ATCAAAATCCATTGGGGAAT+TGG 0.278398 8_4:-18207545 None:intergenic
AAAGGGATATTTGGTAAAAT+AGG 0.282474 8_4:-18204991 None:intergenic
GCATGTGTGTCTTCCTTTGT+AGG 0.282849 8_4:-18207161 None:intergenic
CATGATTGAAAATAATTTCA+TGG 0.317861 8_4:+18207402 Msa1317130:CDS
ACTTACTTCCCATGTTAGTT+AGG 0.330976 8_4:+18207767 Msa1317130:three_prime_UTR
TAGCACAAGAAAGGGATATT+TGG 0.338760 8_4:-18205000 None:intergenic
GAGCAAGTGAAGGTTTATTC+TGG 0.340277 8_4:+18205551 Msa1317130:CDS
ATGGGAGTTTCTTGTTAGAT+TGG 0.341676 8_4:-18207186 None:intergenic
AACATTAAGTGTGAAGAAAT+TGG 0.349506 8_4:+18205051 Msa1317130:CDS
TGAGTGAGGAGGAGATATAA+GGG 0.350623 8_4:-18204850 None:intergenic
AGTGAGACTGAGATAATTTC+AGG 0.355518 8_4:+18207508 Msa1317130:CDS
GGGAATTGGCAATAGAATTT+GGG 0.359861 8_4:-18207531 None:intergenic
TATGGACAAAAGGATATTCT+TGG 0.372931 8_4:+18205620 Msa1317130:CDS
GGTTATAGCTGGAGAAAGTA+TGG 0.376671 8_4:+18205602 Msa1317130:CDS
ATGAATTCTCATTGTTCAAA+TGG 0.381161 8_4:+18205303 Msa1317130:CDS
TGTGCTTGAACTTTGAGTCT+TGG 0.395293 8_4:-18205344 None:intergenic
TATTTGTTCTGTTGTAACTT+AGG 0.403269 8_4:+18207873 Msa1317130:three_prime_UTR
GTGATGATGGAGAGAAAATT+TGG 0.413042 8_4:-18205125 None:intergenic
AAAAGAAGACATATGATAGA+TGG 0.415383 8_4:-18207899 None:intergenic
TATAGAGATCAAAATCCATT+GGG 0.432731 8_4:-18207552 None:intergenic
TGGGAGTTTCTTGTTAGATT+GGG 0.445225 8_4:-18207185 None:intergenic
CTGGAGAAAGTATGGACAAA+AGG 0.452781 8_4:+18205610 Msa1317130:CDS
AAATAATTTCATGGAAAATG+AGG 0.454119 8_4:+18207411 Msa1317130:CDS
GATGATGATGATGGTGATGA+TGG 0.459828 8_4:-18205138 None:intergenic
TCCCTCATTACCCTTTGCCA+TGG 0.480628 8_4:-18205253 None:intergenic
TGTGAAGAAATTGGTCTCAT+TGG 0.485916 8_4:+18205060 Msa1317130:CDS
AACCATGGCAAAGGGTAATG+AGG 0.498135 8_4:+18205251 Msa1317130:CDS
CATGGTTATTGCTGTCTCAA+TGG 0.498462 8_4:-18205235 None:intergenic
TAATTATGATAGCACAAGAA+AGG 0.499097 8_4:-18205009 None:intergenic
GAAATTATCTCAGTCTCACT+TGG 0.500825 8_4:-18207505 None:intergenic
ACAAACATGTGTCCAAGAAA+AGG 0.507877 8_4:+18205364 Msa1317130:CDS
AAAGCTAATGAAATGCCAAA+TGG 0.511471 8_4:-18204935 None:intergenic
CTGTTGAGGATGGTTATAGC+TGG 0.522098 8_4:+18205591 Msa1317130:CDS
AATTATGATAGCACAAGAAA+GGG 0.523403 8_4:-18205008 None:intergenic
TTCAGACCCTATTGATGGAG+AGG 0.523902 8_4:-18207350 None:intergenic
TTCTTGGAGCTAAGTTTCCA+AGG 0.535081 8_4:+18205636 Msa1317130:CDS
TTCTATTGCCAATTCCCCAA+TGG 0.537538 8_4:+18207537 Msa1317130:CDS
AAAAGCTCTCCTAACTAACA+TGG 0.551719 8_4:-18207776 None:intergenic
TTATAGAGATCAAAATCCAT+TGG 0.559577 8_4:-18207553 None:intergenic
TTCACTTGCTCTGTCCACTT+AGG 0.560248 8_4:-18205539 None:intergenic
GATATGGACAGCACTGGACT+AGG 0.571491 8_4:+18207481 Msa1317130:CDS
GACAGCAATAACCATGGCAA+AGG 0.573478 8_4:+18205242 Msa1317130:CDS
ACAGCAATAACCATGGCAAA+GGG 0.573968 8_4:+18205243 Msa1317130:CDS
TATTCTGGAACAGCAGCTGA+AGG 0.574098 8_4:+18205566 Msa1317130:CDS
ACCATGGCAAAGGGTAATGA+GGG 0.583479 8_4:+18205252 Msa1317130:CDS
TGATGTGTGTGAAAATAGAA+AGG 0.584166 8_4:-18204812 None:intergenic
GATGTGTGTGAAAATAGAAA+GGG 0.592105 8_4:-18204811 None:intergenic
ACTAGCACATGAAGAACAAG+TGG 0.596225 8_4:-18204959 None:intergenic
GAGTGAGGAGGAGATATAAG+GGG 0.596537 8_4:-18204849 None:intergenic
TTGCTCTGTCCACTTAGGCA+CGG 0.602998 8_4:-18205534 None:intergenic
TTAGTAAAATGGCAAAGAGG+AGG 0.606211 8_4:+18207694 Msa1317130:three_prime_UTR
GCTGAAGGATCTGTTGAGGA+TGG 0.616817 8_4:+18205581 Msa1317130:CDS
CTATTGGATATGGACAGCAC+TGG 0.619978 8_4:+18207475 Msa1317130:CDS
AGCAGCTGAAGGATCTGTTG+AGG 0.621900 8_4:+18205577 Msa1317130:CDS
AAAGCTCTCCTAACTAACAT+GGG 0.628521 8_4:-18207775 None:intergenic
TGTTGAGGAAGTGATGAGTG+AGG 0.632535 8_4:-18204864 None:intergenic
AAATTTGAGTGGGATTGTTG+AGG 0.634323 8_4:-18204879 None:intergenic
AAATTATCTCAGTCTCACTT+GGG 0.640870 8_4:-18207504 None:intergenic
AAATGGAAGTCCCAAAAGTG+AGG 0.645726 8_4:+18205320 Msa1317130:CDS
ATATGTGAGATAACCTACAA+AGG 0.649008 8_4:+18207148 Msa1317130:CDS
TAATGACATAAATTTCGACA+TGG 0.657601 8_4:+18207573 Msa1317130:CDS
AGATTAGTAAAATGGCAAAG+AGG 0.668095 8_4:+18207691 Msa1317130:three_prime_UTR
TAAGTGGACAGAGCAAGTGA+AGG 0.673359 8_4:+18205541 Msa1317130:CDS
TGAGGAAGTGATGAGTGAGG+AGG 0.682822 8_4:-18204861 None:intergenic
CTCATTGGTGAACTAATGCA+AGG 0.698867 8_4:+18205075 Msa1317130:CDS
CATTGAGACAGCAATAACCA+TGG 0.699108 8_4:+18205236 Msa1317130:CDS
ATAGAGATCAAAATCCATTG+GGG 0.717113 8_4:-18207551 None:intergenic
TGCACACATAGACATGCACA+AGG 0.724252 8_4:+18207079 Msa1317130:CDS
ATGTGTGTGAAAATAGAAAG+GGG 0.731088 8_4:-18204810 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGGTTTTTATTTATTATAT+AGG + chr8_4:18205988-18206007 Msa1317130:intron 10.0%
!!! TTTTTTTTTGAAATTTGAGT+GGG - chr8_4:18204892-18204911 None:intergenic 15.0%
!!! TTTTTTTTTTGAAATTTGAG+TGG - chr8_4:18204893-18204912 None:intergenic 15.0%
!!! TCATAATTTTCATTATTCTT+TGG + chr8_4:18205491-18205510 Msa1317130:intron 15.0%
!!! AAGTTTTATTTGTTCTATTT+AGG + chr8_4:18205969-18205988 Msa1317130:intron 15.0%
!!! ATATAGGAATTTTTTTTGAT+TGG + chr8_4:18206004-18206023 Msa1317130:intron 15.0%
!! AAAAATACTATATCAGATAA+TGG + chr8_4:18206110-18206129 Msa1317130:intron 15.0%
!! AAAATACTATATCAGATAAT+GGG + chr8_4:18206111-18206130 Msa1317130:intron 15.0%
!! AAAAATAAAAAATTGTCCTT+TGG - chr8_4:18206175-18206194 None:intergenic 15.0%
!!! TTTTTTTTTTAAGAATCCAA+AGG + chr8_4:18206190-18206209 Msa1317130:intron 15.0%
!! AAATTAGAAAGATTTAATTC+TGG + chr8_4:18206216-18206235 Msa1317130:intron 15.0%
!! TATTTAATGCTAACTTAAAT+TGG - chr8_4:18206356-18206375 None:intergenic 15.0%
!! ATTGTGTGAATTTATATTAA+TGG - chr8_4:18206461-18206480 None:intergenic 15.0%
!! AATATAAATTCACACAATTA+TGG + chr8_4:18206463-18206482 Msa1317130:intron 15.0%
!!! AGTGATATTAAAATTTTTTG+TGG - chr8_4:18206935-18206954 None:intergenic 15.0%
!!! TAAGTTTCATTGTTTATTTT+TGG - chr8_4:18207752-18207771 None:intergenic 15.0%
!!! ATTTCTTTTAATTCTCCATT+TGG + chr8_4:18204920-18204939 Msa1317130:five_prime_UTR 20.0%
!!! TTCAAGGTTCATTTTTTTAT+AGG + chr8_4:18205441-18205460 Msa1317130:intron 20.0%
!!! GTAATTTTGTCAAATTTACT+AGG - chr8_4:18205729-18205748 None:intergenic 20.0%
!!! AAGAGTTTTGTTATTCATTA+TGG + chr8_4:18205752-18205771 Msa1317130:intron 20.0%
!!! AATTTAATTACTTTTGCTTG+AGG + chr8_4:18205845-18205864 Msa1317130:intron 20.0%
!!! TTTAGACATTATTGGTTAAT+TGG - chr8_4:18206072-18206091 None:intergenic 20.0%
!! CATTGGAAAAATTTAACAAT+TGG + chr8_4:18206296-18206315 Msa1317130:intron 20.0%
!! AATCTGACAATTTAAACTAA+TGG - chr8_4:18206491-18206510 None:intergenic 20.0%
!! ATAGAAACTTTAGATTTCAA+TGG + chr8_4:18206653-18206672 Msa1317130:intron 20.0%
!!! AAAGAGAATTTTTTTTCTTG+AGG - chr8_4:18207292-18207311 None:intergenic 20.0%
!!! CATGAAATTATTTTCAATCA+TGG - chr8_4:18207404-18207423 None:intergenic 20.0%
!! CATGATTGAAAATAATTTCA+TGG + chr8_4:18207402-18207421 Msa1317130:CDS 20.0%
!! AAATAATTTCATGGAAAATG+AGG + chr8_4:18207411-18207430 Msa1317130:CDS 20.0%
!!! TATTGTATTTCACTATTTTG+AGG + chr8_4:18207848-18207867 Msa1317130:three_prime_UTR 20.0%
!!! ATTGCGAAATAAATAGTTTT+TGG + chr8_4:18207940-18207959 Msa1317130:three_prime_UTR 20.0%
! AAAGGGATATTTGGTAAAAT+AGG - chr8_4:18204994-18205013 None:intergenic 25.0%
! AATTATGATAGCACAAGAAA+GGG - chr8_4:18205011-18205030 None:intergenic 25.0%
! TAATTATGATAGCACAAGAA+AGG - chr8_4:18205012-18205031 None:intergenic 25.0%
! AACATTAAGTGTGAAGAAAT+TGG + chr8_4:18205051-18205070 Msa1317130:CDS 25.0%
! ATGAATTCTCATTGTTCAAA+TGG + chr8_4:18205303-18205322 Msa1317130:CDS 25.0%
!! TAATCCAATATACCTTTTCT+TGG - chr8_4:18205379-18205398 None:intergenic 25.0%
!! TTATTGTTTCCTTTTGAACT+TGG + chr8_4:18205409-18205428 Msa1317130:intron 25.0%
!!! ATAGGAATTTTTTTTTCCCA+AGG + chr8_4:18205459-18205478 Msa1317130:intron 25.0%
!!! CATTATTCTTTGGAATTTTG+TGG + chr8_4:18205501-18205520 Msa1317130:intron 25.0%
! GTAAAAAATGATTGTTACCT+TGG - chr8_4:18205656-18205675 None:intergenic 25.0%
! AGGAATTTAAAGATGCATTA+TGG - chr8_4:18205709-18205728 None:intergenic 25.0%
! TATATATTAATCTCCTGAGT+CGG - chr8_4:18205784-18205803 None:intergenic 25.0%
!! AAAAAAGTTATTTGCTGCAT+GGG - chr8_4:18205883-18205902 None:intergenic 25.0%
!! AAAAAAAGTTATTTGCTGCA+TGG - chr8_4:18205884-18205903 None:intergenic 25.0%
! ACCAATAATGTCTAAAAAAG+AGG + chr8_4:18206076-18206095 Msa1317130:intron 25.0%
! CCAATAATGTCTAAAAAAGA+GGG + chr8_4:18206077-18206096 Msa1317130:intron 25.0%
!! ATCTTTCTAATTTTGTCCTT+TGG - chr8_4:18206209-18206228 None:intergenic 25.0%
! TAGAAAGATTTAATTCTGGT+AGG + chr8_4:18206220-18206239 Msa1317130:intron 25.0%
!! GTACTAATGTGTTATTACTT+AGG + chr8_4:18206244-18206263 Msa1317130:intron 25.0%
! TACTACTATTCACACAATTA+TGG + chr8_4:18206433-18206452 Msa1317130:intron 25.0%
!!! TCTTCTTTTTTAAGGAAATC+AGG - chr8_4:18206598-18206617 None:intergenic 25.0%
!!! GCATATCATCTTCTTTTTTA+AGG - chr8_4:18206606-18206625 None:intergenic 25.0%
! GTGAATCACAAATTTAATTC+AGG - chr8_4:18206628-18206647 None:intergenic 25.0%
! ATTATGGAACATATCAAGTA+GGG - chr8_4:18206759-18206778 None:intergenic 25.0%
! AATTATGGAACATATCAAGT+AGG - chr8_4:18206760-18206779 None:intergenic 25.0%
!!! AGTGGATTATCTTCAAATTA+TGG - chr8_4:18206775-18206794 None:intergenic 25.0%
! ATAATTTGAAGATAATCCAC+TGG + chr8_4:18206774-18206793 Msa1317130:intron 25.0%
! CAAAATAACCTTAGATTCTA+TGG - chr8_4:18206977-18206996 None:intergenic 25.0%
!!! ATCTCAACTTTGTTTTTGAT+GGG - chr8_4:18207207-18207226 None:intergenic 25.0%
!!! AATCTCAACTTTGTTTTTGA+TGG - chr8_4:18207208-18207227 None:intergenic 25.0%
! TCAAAAACAAAGTTGAGATT+TGG + chr8_4:18207208-18207227 Msa1317130:CDS 25.0%
!! AAAATTCTCTTTTGACAACA+AGG + chr8_4:18207300-18207319 Msa1317130:CDS 25.0%
! TATAGAGATCAAAATCCATT+GGG - chr8_4:18207555-18207574 None:intergenic 25.0%
! TTATAGAGATCAAAATCCAT+TGG - chr8_4:18207556-18207575 None:intergenic 25.0%
! TAATGACATAAATTTCGACA+TGG + chr8_4:18207573-18207592 Msa1317130:CDS 25.0%
! GTAGATCAAGATTAGTAAAA+TGG + chr8_4:18207683-18207702 Msa1317130:three_prime_UTR 25.0%
! TATTTGTTCTGTTGTAACTT+AGG + chr8_4:18207873-18207892 Msa1317130:three_prime_UTR 25.0%
! AAAAGAAGACATATGATAGA+TGG - chr8_4:18207902-18207921 None:intergenic 25.0%
ATGTGTGTGAAAATAGAAAG+GGG - chr8_4:18204813-18204832 None:intergenic 30.0%
GATGTGTGTGAAAATAGAAA+GGG - chr8_4:18204814-18204833 None:intergenic 30.0%
TGATGTGTGTGAAAATAGAA+AGG - chr8_4:18204815-18204834 None:intergenic 30.0%
AAAGCTAATGAAATGCCAAA+TGG - chr8_4:18204938-18204957 None:intergenic 30.0%
TATGGACAAAAGGATATTCT+TGG + chr8_4:18205620-18205639 Msa1317130:CDS 30.0%
! AAAAAGTTATTTGCTGCATG+GGG - chr8_4:18205882-18205901 None:intergenic 30.0%
AAGTTATAAAGTTTGTCGCT+TGG + chr8_4:18205931-18205950 Msa1317130:intron 30.0%
!!! TTTTTTTTGATTGGTGCAAG+TGG + chr8_4:18206013-18206032 Msa1317130:intron 30.0%
!!! CAATGATATTTTAGTGAGTG+GGG - chr8_4:18206048-18206067 None:intergenic 30.0%
!!! CCAATGATATTTTAGTGAGT+GGG - chr8_4:18206049-18206068 None:intergenic 30.0%
!!! CCCTCTTTTTTAGACATTAT+TGG - chr8_4:18206080-18206099 None:intergenic 30.0%
ATAATGTCTAAAAAAGAGGG+AGG + chr8_4:18206080-18206099 Msa1317130:intron 30.0%
TAATGTCTAAAAAAGAGGGA+GGG + chr8_4:18206081-18206100 Msa1317130:intron 30.0%
!! ACTATATCAGATAATGGGAA+AGG + chr8_4:18206116-18206135 Msa1317130:intron 30.0%
AGACGATAAAAGTTATCCAA+AGG + chr8_4:18206156-18206175 Msa1317130:intron 30.0%
TACTAAAAGAGAAAGGACAT+TGG + chr8_4:18206279-18206298 Msa1317130:intron 30.0%
AACTTAAATTGGTGCATGAA+TGG - chr8_4:18206345-18206364 None:intergenic 30.0%
GTTGTCTATAACAGTGAATT+TGG - chr8_4:18206400-18206419 None:intergenic 30.0%
CTAACCTAAAGTCAAAATGT+AGG + chr8_4:18206546-18206565 Msa1317130:intron 30.0%
!!! ATGACCTACATTTTGACTTT+AGG - chr8_4:18206553-18206572 None:intergenic 30.0%
TCAATGGAGATTTCAAATAG+AGG + chr8_4:18206669-18206688 Msa1317130:intron 30.0%
TTGTTTGTGGTCGAATAATT+AGG + chr8_4:18206799-18206818 Msa1317130:intron 30.0%
ATATGTGAGATAACCTACAA+AGG + chr8_4:18207148-18207167 Msa1317130:CDS 30.0%
!!! TTGGGGTTGAATATTTTGAT+TGG - chr8_4:18207251-18207270 None:intergenic 30.0%
! TGGTTGTATTTTCTCTTCTT+GGG - chr8_4:18207269-18207288 None:intergenic 30.0%
!!! GAGAATTTTTTTTCTTGAGG+TGG - chr8_4:18207289-18207308 None:intergenic 30.0%
! AATTTTTCCTCTCCATCAAT+AGG + chr8_4:18207343-18207362 Msa1317130:CDS 30.0%
! ATTTTTCCTCTCCATCAATA+GGG + chr8_4:18207344-18207363 Msa1317130:CDS 30.0%
AAATTATCTCAGTCTCACTT+GGG - chr8_4:18207507-18207526 None:intergenic 30.0%
ATAGAGATCAAAATCCATTG+GGG - chr8_4:18207554-18207573 None:intergenic 30.0%
AGATTAGTAAAATGGCAAAG+AGG + chr8_4:18207691-18207710 Msa1317130:three_prime_UTR 30.0%
AAATTTGAGTGGGATTGTTG+AGG - chr8_4:18204882-18204901 None:intergenic 35.0%
TAGCACAAGAAAGGGATATT+TGG - chr8_4:18205003-18205022 None:intergenic 35.0%
! TGTGAAGAAATTGGTCTCAT+TGG + chr8_4:18205060-18205079 Msa1317130:CDS 35.0%
!! GTGATGATGGAGAGAAAATT+TGG - chr8_4:18205128-18205147 None:intergenic 35.0%
!! GATGTTGATGATGATGATGA+TGG - chr8_4:18205150-18205169 None:intergenic 35.0%
ACAAACATGTGTCCAAGAAA+AGG + chr8_4:18205364-18205383 Msa1317130:CDS 35.0%
! GTGTCCAAGAAAAGGTATAT+TGG + chr8_4:18205372-18205391 Msa1317130:intron 35.0%
! TTGTTTCCTTTTGAACTTGG+TGG + chr8_4:18205412-18205431 Msa1317130:intron 35.0%
AATTCACCACCAAGTTCAAA+AGG - chr8_4:18205421-18205440 None:intergenic 35.0%
!!! AACTTGGTGGTGAATTTTCA+AGG + chr8_4:18205425-18205444 Msa1317130:intron 35.0%
ATTATGAGATCGTGAACCTT+GGG - chr8_4:18205478-18205497 None:intergenic 35.0%
AATTATGAGATCGTGAACCT+TGG - chr8_4:18205479-18205498 None:intergenic 35.0%
ATTATGGTATTATCCGACTC+AGG + chr8_4:18205768-18205787 Msa1317130:intron 35.0%
CCCACTCACTAAAATATCAT+TGG + chr8_4:18206046-18206065 Msa1317130:intron 35.0%
!!! GCCAATGATATTTTAGTGAG+TGG - chr8_4:18206050-18206069 None:intergenic 35.0%
! TTCTCTTTTAGTACAGTGCA+CGG - chr8_4:18206272-18206291 None:intergenic 35.0%
TGCACTGTACTAAAAGAGAA+AGG + chr8_4:18206272-18206291 Msa1317130:intron 35.0%
! TAATCCACTGGATTTGTTTG+TGG + chr8_4:18206786-18206805 Msa1317130:intron 35.0%
CTTAGATTCTATGGTCATGT+AGG - chr8_4:18206968-18206987 None:intergenic 35.0%
CTACATGACCATAGAATCTA+AGG + chr8_4:18206966-18206985 Msa1317130:intron 35.0%
! AATTGTGATTTGCAATGCAG+AGG + chr8_4:18207046-18207065 Msa1317130:intron 35.0%
TGGGAGTTTCTTGTTAGATT+GGG - chr8_4:18207188-18207207 None:intergenic 35.0%
ATGGGAGTTTCTTGTTAGAT+TGG - chr8_4:18207189-18207208 None:intergenic 35.0%
! GGTTGTATTTTCTCTTCTTG+GGG - chr8_4:18207268-18207287 None:intergenic 35.0%
! GTGGTTGTATTTTCTCTTCT+TGG - chr8_4:18207270-18207289 None:intergenic 35.0%
! ATTCTCTTTTGACAACAAGG+AGG + chr8_4:18207303-18207322 Msa1317130:CDS 35.0%
! TCATTTTCAGACCCTATTGA+TGG - chr8_4:18207358-18207377 None:intergenic 35.0%
! CATTTTCTGCTTGTCACTAT+TGG + chr8_4:18207459-18207478 Msa1317130:CDS 35.0%
GAAATTATCTCAGTCTCACT+TGG - chr8_4:18207508-18207527 None:intergenic 35.0%
AGTGAGACTGAGATAATTTC+AGG + chr8_4:18207508-18207527 Msa1317130:CDS 35.0%
GGGAATTGGCAATAGAATTT+GGG - chr8_4:18207534-18207553 None:intergenic 35.0%
ATCAAAATCCATTGGGGAAT+TGG - chr8_4:18207548-18207567 None:intergenic 35.0%
! GCACTTAGAAATTTTGTGCA+TGG + chr8_4:18207643-18207662 Msa1317130:three_prime_UTR 35.0%
TTAGTAAAATGGCAAAGAGG+AGG + chr8_4:18207694-18207713 Msa1317130:three_prime_UTR 35.0%
ACTTACTTCCCATGTTAGTT+AGG + chr8_4:18207767-18207786 Msa1317130:three_prime_UTR 35.0%
AAAGCTCTCCTAACTAACAT+GGG - chr8_4:18207778-18207797 None:intergenic 35.0%
AAAAGCTCTCCTAACTAACA+TGG - chr8_4:18207779-18207798 None:intergenic 35.0%
! TGTTAGTTAGGAGAGCTTTT+CGG + chr8_4:18207779-18207798 Msa1317130:three_prime_UTR 35.0%
TGAGTGAGGAGGAGATATAA+GGG - chr8_4:18204853-18204872 None:intergenic 40.0%
ATGAGTGAGGAGGAGATATA+AGG - chr8_4:18204854-18204873 None:intergenic 40.0%
ACTAGCACATGAAGAACAAG+TGG - chr8_4:18204962-18204981 None:intergenic 40.0%
CTCATTGGTGAACTAATGCA+AGG + chr8_4:18205075-18205094 Msa1317130:CDS 40.0%
!! GATGATGATGATGGTGATGA+TGG - chr8_4:18205141-18205160 None:intergenic 40.0%
CATGGTTATTGCTGTCTCAA+TGG - chr8_4:18205238-18205257 None:intergenic 40.0%
CATTGAGACAGCAATAACCA+TGG + chr8_4:18205236-18205255 Msa1317130:CDS 40.0%
ACAGCAATAACCATGGCAAA+GGG + chr8_4:18205243-18205262 Msa1317130:CDS 40.0%
AAATGGAAGTCCCAAAAGTG+AGG + chr8_4:18205320-18205339 Msa1317130:CDS 40.0%
TGTGCTTGAACTTTGAGTCT+TGG - chr8_4:18205347-18205366 None:intergenic 40.0%
GAGCAAGTGAAGGTTTATTC+TGG + chr8_4:18205551-18205570 Msa1317130:CDS 40.0%
GGTTATAGCTGGAGAAAGTA+TGG + chr8_4:18205602-18205621 Msa1317130:CDS 40.0%
! CTGGAGAAAGTATGGACAAA+AGG + chr8_4:18205610-18205629 Msa1317130:CDS 40.0%
TTCTTGGAGCTAAGTTTCCA+AGG + chr8_4:18205636-18205655 Msa1317130:CDS 40.0%
TTCATGGACACAGAAATGCA+GGG - chr8_4:18206882-18206901 None:intergenic 40.0%
TTTCATGGACACAGAAATGC+AGG - chr8_4:18206883-18206902 None:intergenic 40.0%
!! CACTTCTGTTGGTAGTTTCA+TGG - chr8_4:18206898-18206917 None:intergenic 40.0%
! AAACTACCAACAGAAGTGCA+GGG + chr8_4:18206900-18206919 Msa1317130:intron 40.0%
CTGCTTGTCACTATTGGATA+TGG + chr8_4:18207465-18207484 Msa1317130:CDS 40.0%
GGGGAATTGGCAATAGAATT+TGG - chr8_4:18207535-18207554 None:intergenic 40.0%
TTCTATTGCCAATTCCCCAA+TGG + chr8_4:18207537-18207556 Msa1317130:CDS 40.0%
! GTTAGTTAGGAGAGCTTTTC+GGG + chr8_4:18207780-18207799 Msa1317130:three_prime_UTR 40.0%
! TTAGTTAGGAGAGCTTTTCG+GGG + chr8_4:18207781-18207800 Msa1317130:three_prime_UTR 40.0%
! GTCTTCTTTTGTTCAAGCTG+AGG + chr8_4:18207912-18207931 Msa1317130:three_prime_UTR 40.0%
! AGGGGCATGCTCAAAAATGA+AGG - chr8_4:18204795-18204814 None:intergenic 45.0%
GAGTGAGGAGGAGATATAAG+GGG - chr8_4:18204852-18204871 None:intergenic 45.0%
TGTTGAGGAAGTGATGAGTG+AGG - chr8_4:18204867-18204886 None:intergenic 45.0%
GACAGCAATAACCATGGCAA+AGG + chr8_4:18205242-18205261 Msa1317130:CDS 45.0%
AACCATGGCAAAGGGTAATG+AGG + chr8_4:18205251-18205270 Msa1317130:CDS 45.0%
ACCATGGCAAAGGGTAATGA+GGG + chr8_4:18205252-18205271 Msa1317130:CDS 45.0%
!! GAGTCTTGGACCTCACTTTT+GGG - chr8_4:18205333-18205352 None:intergenic 45.0%
! TGAGTCTTGGACCTCACTTT+TGG - chr8_4:18205334-18205353 None:intergenic 45.0%
TTCACTTGCTCTGTCCACTT+AGG - chr8_4:18205542-18205561 None:intergenic 45.0%
TAAGTGGACAGAGCAAGTGA+AGG + chr8_4:18205541-18205560 Msa1317130:CDS 45.0%
!! TATTCTGGAACAGCAGCTGA+AGG + chr8_4:18205566-18205585 Msa1317130:CDS 45.0%
CTGTTGAGGATGGTTATAGC+TGG + chr8_4:18205591-18205610 Msa1317130:CDS 45.0%
TTGATTGGTGCAAGTGGCTT+TGG + chr8_4:18206019-18206038 Msa1317130:intron 45.0%
TGATTGGTGCAAGTGGCTTT+GGG + chr8_4:18206020-18206039 Msa1317130:intron 45.0%
TCGACCACAAACAAATCCAG+TGG - chr8_4:18206793-18206812 None:intergenic 45.0%
GTGTGGAGAAGTGAGAAATC+CGG + chr8_4:18206841-18206860 Msa1317130:intron 45.0%
TGTGGAGAAGTGAGAAATCC+GGG + chr8_4:18206842-18206861 Msa1317130:intron 45.0%
TCATGGACACAGAAATGCAG+GGG - chr8_4:18206881-18206900 None:intergenic 45.0%
! GAAACTACCAACAGAAGTGC+AGG + chr8_4:18206899-18206918 Msa1317130:intron 45.0%
TGCACACATAGACATGCACA+AGG + chr8_4:18207079-18207098 Msa1317130:CDS 45.0%
GCATGTGTGTCTTCCTTTGT+AGG - chr8_4:18207164-18207183 None:intergenic 45.0%
TTCAGACCCTATTGATGGAG+AGG - chr8_4:18207353-18207372 None:intergenic 45.0%
CTATTGGATATGGACAGCAC+TGG + chr8_4:18207475-18207494 Msa1317130:CDS 45.0%
TGAGGAAGTGATGAGTGAGG+AGG - chr8_4:18204864-18204883 None:intergenic 50.0%
TCCCTCATTACCCTTTGCCA+TGG - chr8_4:18205256-18205275 None:intergenic 50.0%
GCAGAAAAACCGTGCCTAAG+TGG + chr8_4:18205525-18205544 Msa1317130:intron 50.0%
TTGCTCTGTCCACTTAGGCA+CGG - chr8_4:18205537-18205556 None:intergenic 50.0%
AGCAGCTGAAGGATCTGTTG+AGG + chr8_4:18205577-18205596 Msa1317130:CDS 50.0%
GCTGAAGGATCTGTTGAGGA+TGG + chr8_4:18205581-18205600 Msa1317130:CDS 50.0%
AGACTCGCACGCTATAAGTG+TGG + chr8_4:18206824-18206843 Msa1317130:intron 50.0%
GTGGAGAAGTGAGAAATCCG+GGG + chr8_4:18206843-18206862 Msa1317130:intron 50.0%
TGATAGCCCTGCACTTCTGT+TGG - chr8_4:18206909-18206928 None:intergenic 50.0%
! GATATGGACAGCACTGGACT+AGG + chr8_4:18207481-18207500 Msa1317130:CDS 50.0%
!! GAGAGCTTTTCGGGGTAGTT+AGG + chr8_4:18207789-18207808 Msa1317130:three_prime_UTR 50.0%
AGGGGTCGGAATTCAAACCC+CGG - chr8_4:18206863-18206882 None:intergenic 55.0%
GGACACAGAAATGCAGGGGT+CGG - chr8_4:18206877-18206896 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 18204790 18207967 18204790 ID=Msa1317130;Name=Msa1317130
chr8_4 mRNA 18204790 18207967 18204790 ID=Msa1317130-mRNA-1;Parent=Msa1317130;Name=Msa1317130-mRNA-1;_AED=0.00;_eAED=0.00;_QI=252|1|1|1|1|1|3|334|346
chr8_4 exon 18204790 18205385 18204790 ID=Msa1317130-mRNA-1:exon:6734;Parent=Msa1317130-mRNA-1
chr8_4 exon 18205529 18205657 18205529 ID=Msa1317130-mRNA-1:exon:6735;Parent=Msa1317130-mRNA-1
chr8_4 exon 18207066 18207967 18207066 ID=Msa1317130-mRNA-1:exon:6736;Parent=Msa1317130-mRNA-1
chr8_4 five_prime_UTR 18204790 18205041 18204790 ID=Msa1317130-mRNA-1:five_prime_utr;Parent=Msa1317130-mRNA-1
chr8_4 CDS 18205042 18205385 18205042 ID=Msa1317130-mRNA-1:cds;Parent=Msa1317130-mRNA-1
chr8_4 CDS 18205529 18205657 18205529 ID=Msa1317130-mRNA-1:cds;Parent=Msa1317130-mRNA-1
chr8_4 CDS 18207066 18207633 18207066 ID=Msa1317130-mRNA-1:cds;Parent=Msa1317130-mRNA-1
chr8_4 three_prime_UTR 18207634 18207967 18207634 ID=Msa1317130-mRNA-1:three_prime_utr;Parent=Msa1317130-mRNA-1
Gene Sequence

>Msa1317130

ATGAAAGAGAACATTAAGTGTGAAGAAATTGGTCTCATTGGTGAACTAATGCAAGGTGAAGAGCTAGCAAAGAAGCTTTATGACCAAATTTTCTCTCCATCATCACCATCATCATCATCATCAACATCATCATCATCATCAACATCAACATCAACTTCATCACATGAAGTCTTAATTGACAAATTAATTTTGTCCATTGAGACAGCAATAACCATGGCAAAGGGTAATGAGGGAAAAATTAAGACAAACAATGTCAACATGATGAATTCTCATTGTTCAAATGGAAGTCCCAAAAGTGAGGTCCAAGACTCAAAGTTCAAGCACAAACATGTGTCCAAGAAAAGAAAAACCGTGCCTAAGTGGACAGAGCAAGTGAAGGTTTATTCTGGAACAGCAGCTGAAGGATCTGTTGAGGATGGTTATAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGACATGCACAAGGTTGTCTAGCTACTAAGCAAGTGCAAAAATCAGATGAAGATGAAATGATATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAATCTAACAAGAAACTCCCATCAAAAACAAAGTTGAGATTTGGACAAAATAAATCACAATCCAATCAAAATATTCAACCCCAAGAAGAGAAAATACAACCACCTCAAGAAAAAAAATTCTCTTTTGACAACAAGGAGGATATATTTCAATCATTCAATTTTTCCTCTCCATCAATAGGGTCTGAAAATGAAGATAACAACATATTTTTAGAGACCATGATTGAAAATAATTTCATGGAAAATGAGGATAACAATATATTCTCAGAATCAAACATTTTCTGCTTGTCACTATTGGATATGGACAGCACTGGACTAGGCCCAAGTGAGACTGAGATAATTTCAGGCCCAAATTCTATTGCCAATTCCCCAATGGATTTTGATCTCTATAATGACATAAATTTCGACATGGATGATTTCTCTATCAACACACAAGAACTTTGCTATTGA
Protein sequence

>Msa1317130

MKENIKCEEIGLIGELMQGEELAKKLYDQIFSPSSPSSSSSTSSSSSTSTSTSSHEVLIDKLILSIETAITMAKGNEGKIKTNNVNMMNSHCSNGSPKSEVQDSKFKHKHVSKKRKTVPKWTEQVKVYSGTAAEGSVEDGYSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEDEMICEITYKGRHTCTQSNKKLPSKTKLRFGQNKSQSNQNIQPQEEKIQPPQEKKFSFDNKEDIFQSFNFSSPSIGSENEDNNIFLETMIENNFMENEDNNIFSESNIFCLSLLDMDSTGLGPSETEIISGPNSIANSPMDFDLYNDINFDMDDFSINTQELCY*