Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865330 | XP_003618062.1 | 72.414 | 203 | 29 | 3 | 41 | 241 | 34 | 211 | 7.68e-85 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865330 | G7K0N6 | 72.414 | 203 | 29 | 3 | 41 | 241 | 34 | 211 | 3.67e-85 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015480 | Msa0865330 | 0.805260 | 1.454850e-49 | -8.615850e-47 |
| Msa0030160 | Msa0865330 | 0.800541 | 1.373474e-48 | -8.615850e-47 |
| Msa0037540 | Msa0865330 | -0.834743 | 2.512250e-56 | -8.615850e-47 |
| Msa0037590 | Msa0865330 | -0.831544 | 1.572210e-55 | -8.615850e-47 |
| Msa0041720 | Msa0865330 | 0.804646 | 1.955001e-49 | -8.615850e-47 |
| Msa0054260 | Msa0865330 | 0.806472 | 8.092772e-50 | -8.615850e-47 |
| Msa0082680 | Msa0865330 | -0.816047 | 6.762869e-52 | -8.615850e-47 |
| Msa0092410 | Msa0865330 | 0.805915 | 1.060018e-49 | -8.615850e-47 |
| Msa0097590 | Msa0865330 | 0.814927 | 1.200304e-51 | -8.615850e-47 |
| Msa0100090 | Msa0865330 | 0.833467 | 5.245437e-56 | -8.615850e-47 |
| Msa0103250 | Msa0865330 | 0.800112 | 1.679229e-48 | -8.615850e-47 |
| Msa0104700 | Msa0865330 | 0.803321 | 3.685386e-49 | -8.615850e-47 |
| Msa0109590 | Msa0865330 | 0.826948 | 2.049165e-54 | -8.615850e-47 |
| Msa0614920 | Msa0865330 | 0.811822 | 5.777147e-51 | -8.615850e-47 |
| Msa0620620 | Msa0865330 | 0.833659 | 4.695619e-56 | -8.615850e-47 |
| Msa0626850 | Msa0865330 | 0.822307 | 2.540977e-53 | -8.615850e-47 |
| Msa0689780 | Msa0865330 | 0.801462 | 8.900922e-49 | -8.615850e-47 |
| Msa0708310 | Msa0865330 | 0.812283 | 4.582396e-51 | -8.615850e-47 |
| Msa0711150 | Msa0865330 | 0.819515 | 1.115396e-52 | -8.615850e-47 |
| Msa0715410 | Msa0865330 | 0.844458 | 7.467160e-59 | -8.615850e-47 |
| Msa0741070 | Msa0865330 | 0.802056 | 6.723515e-49 | -8.615850e-47 |
| Msa0742150 | Msa0865330 | 0.821811 | 3.311021e-53 | -8.615850e-47 |
| Msa0745070 | Msa0865330 | 0.892285 | 1.827721e-74 | -8.615850e-47 |
| Msa0790440 | Msa0865330 | -0.821192 | 4.601454e-53 | -8.615850e-47 |
| Msa0823440 | Msa0865330 | 0.812115 | 4.986197e-51 | -8.615850e-47 |
| Msa0825870 | Msa0865330 | 0.920867 | 7.419920e-88 | -8.615850e-47 |
| Msa0826760 | Msa0865330 | 0.849812 | 2.542020e-60 | -8.615850e-47 |
| Msa0828240 | Msa0865330 | 0.800832 | 1.198003e-48 | -8.615850e-47 |
| Msa0830230 | Msa0865330 | 0.816759 | 4.687033e-52 | -8.615850e-47 |
| Msa0125650 | Msa0865330 | 0.811018 | 8.637097e-51 | -8.615850e-47 |
| Msa0129190 | Msa0865330 | -0.817909 | 2.581681e-52 | -8.615850e-47 |
| Msa0137800 | Msa0865330 | 0.804755 | 1.854824e-49 | -8.615850e-47 |
| Msa0138020 | Msa0865330 | 0.818243 | 2.170034e-52 | -8.615850e-47 |
| Msa0187830 | Msa0865330 | 0.802725 | 4.894902e-49 | -8.615850e-47 |
| Msa0197660 | Msa0865330 | 0.842292 | 2.827515e-58 | -8.615850e-47 |
| Msa0198640 | Msa0865330 | 0.846498 | 2.091101e-59 | -8.615850e-47 |
| Msa0201530 | Msa0865330 | 0.801346 | 9.404374e-49 | -8.615850e-47 |
| Msa0201570 | Msa0865330 | 0.806270 | 8.924262e-50 | -8.615850e-47 |
| Msa0208300 | Msa0865330 | 0.824670 | 7.116944e-54 | -8.615850e-47 |
| Msa0215590 | Msa0865330 | 0.857645 | 1.417456e-62 | -8.615850e-47 |
| Msa0217700 | Msa0865330 | 0.827112 | 1.872850e-54 | -8.615850e-47 |
| Msa0231060 | Msa0865330 | 0.815756 | 7.853846e-52 | -8.615850e-47 |
| Msa0233290 | Msa0865330 | 0.800800 | 1.216153e-48 | -8.615850e-47 |
| Msa0402180 | Msa0865330 | 0.811687 | 6.179626e-51 | -8.615850e-47 |
| Msa0468320 | Msa0865330 | 0.814951 | 1.186145e-51 | -8.615850e-47 |
| Msa0482180 | Msa0865330 | 0.803975 | 2.696616e-49 | -8.615850e-47 |
| Msa0239800 | Msa0865330 | 0.842628 | 2.302523e-58 | -8.615850e-47 |
| Msa0244190 | Msa0865330 | 0.802694 | 4.968363e-49 | -8.615850e-47 |
| Msa0255850 | Msa0865330 | 0.832468 | 9.290603e-56 | -8.615850e-47 |
| Msa0257520 | Msa0865330 | 0.805116 | 1.558930e-49 | -8.615850e-47 |
| Msa0264830 | Msa0865330 | 0.809589 | 1.756219e-50 | -8.615850e-47 |
| Msa0269810 | Msa0865330 | 0.805333 | 1.404303e-49 | -8.615850e-47 |
| Msa0270170 | Msa0865330 | -0.822955 | 1.795200e-53 | -8.615850e-47 |
| Msa0277820 | Msa0865330 | 0.816013 | 6.882323e-52 | -8.615850e-47 |
| Msa0282720 | Msa0865330 | 0.816742 | 4.727574e-52 | -8.615850e-47 |
| Msa0296820 | Msa0865330 | 0.825673 | 4.122822e-54 | -8.615850e-47 |
| Msa0302870 | Msa0865330 | 0.800844 | 1.190849e-48 | -8.615850e-47 |
| Msa0317510 | Msa0865330 | 0.837545 | 4.879011e-57 | -8.615850e-47 |
| Msa0333650 | Msa0865330 | 0.859429 | 4.161751e-63 | -8.615850e-47 |
| Msa0340340 | Msa0865330 | 0.818008 | 2.452567e-52 | -8.615850e-47 |
| Msa0347750 | Msa0865330 | 0.803916 | 2.774582e-49 | -8.615850e-47 |
| Msa0357830 | Msa0865330 | 0.815030 | 1.138786e-51 | -8.615850e-47 |
| Msa0357840 | Msa0865330 | 0.806009 | 1.012699e-49 | -8.615850e-47 |
| Msa0483800 | Msa0865330 | 0.819767 | 9.769739e-53 | -8.615850e-47 |
| Msa0530100 | Msa0865330 | 0.811591 | 6.486181e-51 | -8.615850e-47 |
| Msa0541040 | Msa0865330 | 0.802030 | 6.805539e-49 | -8.615850e-47 |
| Msa0574600 | Msa0865330 | 0.808989 | 2.361070e-50 | -8.615850e-47 |
| Msa0584860 | Msa0865330 | 0.813807 | 2.123092e-51 | -8.615850e-47 |
| Msa0587030 | Msa0865330 | 0.801248 | 9.848548e-49 | -8.615850e-47 |
| Msa0588870 | Msa0865330 | 0.806837 | 6.775610e-50 | -8.615850e-47 |
| Msa0596800 | Msa0865330 | 0.811084 | 8.354844e-51 | -8.615850e-47 |
| Msa0597000 | Msa0865330 | 0.839664 | 1.384118e-57 | -8.615850e-47 |
| Msa0865330 | Msa0870060 | 0.821021 | 5.036920e-53 | -8.615850e-47 |
| Msa0865330 | Msa0887960 | 0.822144 | 2.771590e-53 | -8.615850e-47 |
| Msa0865330 | Msa0901320 | 0.811008 | 8.678620e-51 | -8.615850e-47 |
| Msa0865330 | Msa0903370 | 0.805807 | 1.116994e-49 | -8.615850e-47 |
| Msa0865330 | Msa0914260 | 0.802998 | 4.299150e-49 | -8.615850e-47 |
| Msa0865330 | Msa0914290 | 0.807989 | 3.860475e-50 | -8.615850e-47 |
| Msa0865330 | Msa0914610 | 0.802115 | 6.539100e-49 | -8.615850e-47 |
| Msa0865330 | Msa0932100 | 0.823418 | 1.400137e-53 | -8.615850e-47 |
| Msa0865330 | Msa0932190 | 0.812059 | 5.127833e-51 | -8.615850e-47 |
| Msa0865330 | Msa0935770 | 0.827901 | 1.211363e-54 | -8.615850e-47 |
| Msa0865330 | Msa0943190 | 0.818733 | 1.679914e-52 | -8.615850e-47 |
| Msa0865330 | Msa0970230 | 0.824713 | 6.953414e-54 | -8.615850e-47 |
| Msa0865330 | Msa0973600 | 0.824716 | 6.940855e-54 | -8.615850e-47 |
| Msa0865330 | Msa0994390 | 0.823951 | 1.050606e-53 | -8.615850e-47 |
| Msa0865330 | Msa1007230 | 0.810728 | 9.979415e-51 | -8.615850e-47 |
| Msa0865330 | Msa1025080 | 0.813574 | 2.389759e-51 | -8.615850e-47 |
| Msa0865330 | Msa1026940 | 0.811381 | 7.202486e-51 | -8.615850e-47 |
| Msa0865330 | Msa1064250 | 0.816228 | 6.160823e-52 | -8.615850e-47 |
| Msa0865330 | Msa1080640 | 0.808757 | 2.647499e-50 | -8.615850e-47 |
| Msa0865330 | Msa1100930 | 0.816536 | 5.257942e-52 | -8.615850e-47 |
| Msa0865330 | Msa1109090 | 0.824617 | 7.324106e-54 | -8.615850e-47 |
| Msa0865330 | Msa1127190 | 0.808396 | 3.160989e-50 | -8.615850e-47 |
| Msa0865330 | Msa1157080 | 0.818970 | 1.484416e-52 | -8.615850e-47 |
| Msa0865330 | Msa1162780 | 0.804331 | 2.273662e-49 | -8.615850e-47 |
| Msa0865330 | Msa1163540 | 0.813248 | 2.817318e-51 | -8.615850e-47 |
| Msa0865330 | Msa1177330 | 0.805354 | 1.389883e-49 | -8.615850e-47 |
| Msa0865330 | Msa1180500 | 0.802219 | 6.223096e-49 | -8.615850e-47 |
| Msa0865330 | Msa1200250 | 0.805075 | 1.589902e-49 | -8.615850e-47 |
| Msa0865330 | Msa1206850 | 0.801451 | 8.949591e-49 | -8.615850e-47 |
| Msa0865330 | Msa1210110 | 0.814501 | 1.491816e-51 | -8.615850e-47 |
| Msa0865330 | Msa1225100 | 0.838753 | 2.385102e-57 | -8.615850e-47 |
| Msa0865330 | Msa1231840 | 0.807786 | 4.263527e-50 | -8.615850e-47 |
| Msa0865330 | Msa1236730 | 0.833104 | 6.457556e-56 | -8.615850e-47 |
| Msa0865330 | Msa1246700 | 0.882045 | 1.447514e-70 | -8.615850e-47 |
| Msa0865330 | Msa1262020 | 0.813366 | 2.655044e-51 | -8.615850e-47 |
| Msa0865330 | Msa1269660 | 0.874555 | 6.161164e-68 | -8.615850e-47 |
| Msa0865330 | Msa1272610 | 0.821695 | 3.521176e-53 | -8.615850e-47 |
| Msa0865330 | Msa1276340 | 0.802029 | 6.811300e-49 | -8.615850e-47 |
| Msa0865330 | Msa1310440 | 0.810544 | 1.093330e-50 | -8.615850e-47 |
| Msa0865330 | Msa1312520 | 0.800685 | 1.283472e-48 | -8.615850e-47 |
| Msa0865330 | Msa1317130 | 0.839547 | 1.484244e-57 | -8.615850e-47 |
| Msa0865330 | Msa1329870 | 0.838325 | 3.074665e-57 | -8.615850e-47 |
| Msa0865330 | Msa1344340 | 0.804499 | 2.097773e-49 | -8.615850e-47 |
| Msa0865330 | Msa1344890 | 0.824879 | 6.355460e-54 | -8.615850e-47 |
| Msa0865330 | Msa1353890 | 0.817933 | 2.550475e-52 | -8.615850e-47 |
| Msa0865330 | Msa1355890 | 0.836357 | 9.811434e-57 | -8.615850e-47 |
| Msa0865330 | Msa1365270 | 0.878669 | 2.328941e-69 | -8.615850e-47 |
| Msa0865330 | Msa1376450 | 0.865838 | 4.415572e-65 | -8.615850e-47 |
| Msa0865330 | Msa1382790 | 0.821188 | 4.610848e-53 | -8.615850e-47 |
| Msa0865330 | Msa1383100 | 0.805630 | 1.216461e-49 | -8.615850e-47 |
| Msa0865330 | Msa1391550 | 0.881145 | 3.060049e-70 | -8.615850e-47 |
| Msa0865330 | Msa1403530 | -0.825977 | 3.491369e-54 | -8.615850e-47 |
| Msa0865330 | Msa1405220 | 0.839839 | 1.246196e-57 | -8.615850e-47 |
| Msa0865330 | Msa1418280 | 0.855759 | 5.084994e-62 | -8.615850e-47 |
| Msa0865330 | Msa1420270 | 0.804036 | 2.619297e-49 | -8.615850e-47 |
| Msa0865330 | Msa1424750 | 0.804427 | 2.171951e-49 | -8.615850e-47 |
| Msa0865330 | Msa1436600 | 0.800712 | 1.267398e-48 | -8.615850e-47 |
| Msa0865330 | Msa1437210 | 0.807548 | 4.791248e-50 | -8.615850e-47 |
| Msa0865330 | Msa1457160 | 0.824907 | 6.259318e-54 | -8.615850e-47 |
| Msa0865330 | Msa1461550 | 0.801831 | 7.479139e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865330 | MtrunA17_Chr5g0448291 | 72.414 | 203 | 29 | 3 | 41 | 241 | 34 | 211 | 7.06e-89 | 261 |
| Msa0865330 | MtrunA17_Chr5g0448311 | 84.127 | 189 | 24 | 2 | 41 | 223 | 25 | 213 | 1.08e-78 | 236 |
| Msa0865330 | MtrunA17_Chr5g0448321 | 42.029 | 207 | 67 | 9 | 42 | 242 | 32 | 191 | 3.35e-32 | 116 |
| Msa0865330 | MtrunA17_Chr7g0252101 | 75.000 | 40 | 10 | 0 | 1 | 40 | 338 | 377 | 1.21e-13 | 69.7 |
| Msa0865330 | MtrunA17_Chr1g0209051 | 67.500 | 40 | 13 | 0 | 1 | 40 | 177 | 216 | 1.47e-11 | 62.8 |
| Msa0865330 | MtrunA17_Chr1g0202841 | 62.500 | 40 | 15 | 0 | 1 | 40 | 83 | 122 | 1.69e-11 | 61.2 |
| Msa0865330 | MtrunA17_Chr3g0093911 | 67.500 | 40 | 13 | 0 | 1 | 40 | 256 | 295 | 2.24e-11 | 62.8 |
| Msa0865330 | MtrunA17_Chr1g0209191 | 72.500 | 40 | 8 | 1 | 1 | 40 | 1 | 37 | 6.07e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATTACAGAACCAATTTA+TGG | 0.198507 | 5_4:-65973890 | Msa0865330:CDS |
| ATAACGTTATCACCATAAAT+TGG | 0.281020 | 5_4:+65973878 | None:intergenic |
| CTCTCATATTCCCACCTGCT+TGG | 0.343963 | 5_4:+65975465 | None:intergenic |
| AGAAGAGGGAAATGCTCTTA+TGG | 0.351628 | 5_4:-65973768 | Msa0865330:CDS |
| TCTCATATTCCCACCTGCTT+GGG | 0.377138 | 5_4:+65975466 | None:intergenic |
| AATTTATGGTGATAACGTTA+TGG | 0.395413 | 5_4:-65973876 | Msa0865330:CDS |
| AACCATGAGTTATGTCAAAC+TGG | 0.399495 | 5_4:-65975559 | None:intergenic |
| CTCAATGCATAACAACTTCC+CGG | 0.409606 | 5_4:+65975492 | None:intergenic |
| TATGTCAAACTGGAAACTTT+AGG | 0.412133 | 5_4:-65975549 | Msa0865330:CDS |
| AGTGAAGAGTTTCGTGATAG+TGG | 0.437310 | 5_4:-65973714 | Msa0865330:CDS |
| CTGATATGTAAAATTCGAAC+CGG | 0.464643 | 5_4:+65973918 | None:intergenic |
| TTGCATAAGGAATGGCTTCA+AGG | 0.464946 | 5_4:+65974090 | None:intergenic |
| CAAGAAGGATATTGCAGAGA+AGG | 0.490364 | 5_4:+65974032 | None:intergenic |
| TGATGAGTGGTTGATGAAGA+GGG | 0.490655 | 5_4:+65973977 | None:intergenic |
| AGAAGATGAAGGAAAAGAAG+AGG | 0.503671 | 5_4:-65973783 | Msa0865330:CDS |
| GAAGATGAAGGAAAAGAAGA+GGG | 0.505978 | 5_4:-65973782 | Msa0865330:CDS |
| TGTAGCTAAAGAATTGCATA+AGG | 0.524182 | 5_4:+65974077 | None:intergenic |
| TCGACAGCGACAAGAGTAAC+CGG | 0.524574 | 5_4:-65973937 | Msa0865330:CDS |
| ATGCATTGAGCAACCCAAGC+AGG | 0.531702 | 5_4:-65975479 | Msa0865330:CDS |
| TTCCAGTTTGACATAACTCA+TGG | 0.536068 | 5_4:+65975557 | None:intergenic |
| ATTGAAGCAGAAGAAGATGA+AGG | 0.541164 | 5_4:-65973794 | Msa0865330:CDS |
| CTAAAGAATTGCATAAGGAA+TGG | 0.544450 | 5_4:+65974082 | None:intergenic |
| TAGTGCTGCGAATATGATGC+CGG | 0.548464 | 5_4:-65975511 | Msa0865330:CDS |
| TTGATGAGTGGTTGATGAAG+AGG | 0.572497 | 5_4:+65973976 | None:intergenic |
| CATTGAGCAACCCAAGCAGG+TGG | 0.585820 | 5_4:-65975476 | Msa0865330:CDS |
| AGTGCTGCGAATATGATGCC+GGG | 0.588436 | 5_4:-65975510 | Msa0865330:CDS |
| ATAATGCAATAAAAGCAAGA+AGG | 0.623530 | 5_4:+65974017 | None:intergenic |
| GGTTACTCTTGTCGCTGTCG+AGG | 0.630249 | 5_4:+65973939 | None:intergenic |
| GATAGTGAAACCAGAAAATG+TGG | 0.638900 | 5_4:-65973819 | Msa0865330:CDS |
| GAAACTAAACAAGAAATGTG+AGG | 0.665023 | 5_4:-65973606 | Msa0865330:CDS |
| ATTGAGCAACCCAAGCAGGT+GGG | 0.670746 | 5_4:-65975475 | Msa0865330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATTTAATTAAAATCATA+AGG | + | chr5_4:65974538-65974557 | None:intergenic | 10.0% |
| !! | ATCATTTAATTAAAATCATA+AGG | + | chr5_4:65974538-65974557 | None:intergenic | 10.0% |
| !! | TAATAATAGTATTATACTTG+TGG | + | chr5_4:65974004-65974023 | None:intergenic | 15.0% |
| !!! | ATTTGAAGCTTTAAATTAAT+AGG | - | chr5_4:65974277-65974296 | Msa0865330:intron | 15.0% |
| !!! | TTAATAGATTGATGTTTTTA+AGG | - | chr5_4:65974358-65974377 | Msa0865330:intron | 15.0% |
| !!! | TAATAGATTGATGTTTTTAA+GGG | - | chr5_4:65974359-65974378 | Msa0865330:intron | 15.0% |
| !! | TAATAATAGTATTATACTTG+TGG | + | chr5_4:65974004-65974023 | None:intergenic | 15.0% |
| !!! | ATTTGAAGCTTTAAATTAAT+AGG | - | chr5_4:65974277-65974296 | Msa0865330:intron | 15.0% |
| !!! | TTAATAGATTGATGTTTTTA+AGG | - | chr5_4:65974358-65974377 | Msa0865330:intron | 15.0% |
| !!! | TAATAGATTGATGTTTTTAA+GGG | - | chr5_4:65974359-65974378 | Msa0865330:intron | 15.0% |
| !!! | GCTTATTTTTATCTAATTAG+AGG | + | chr5_4:65973962-65973981 | None:intergenic | 20.0% |
| !!! | TTTTGCGAGATAAATTAAAT+TGG | + | chr5_4:65974104-65974123 | None:intergenic | 20.0% |
| !! | AACAAAAAAAAACTTGCATA+TGG | - | chr5_4:65974184-65974203 | Msa0865330:intron | 20.0% |
| !!! | TTTCATCTTGAAAGAATTTT+AGG | - | chr5_4:65974240-65974259 | Msa0865330:intron | 20.0% |
| !!! | ATTTTCCAAGTAATTTCTAT+GGG | - | chr5_4:65974753-65974772 | Msa0865330:intron | 20.0% |
| !!! | TTCTTCATTTTCTTCTATTT+GGG | + | chr5_4:65975327-65975346 | None:intergenic | 20.0% |
| !! | TTTATCAAAAAAATGAAAGC+TGG | - | chr5_4:65975479-65975498 | Msa0865330:CDS | 20.0% |
| !!! | GCTTATTTTTATCTAATTAG+AGG | + | chr5_4:65973962-65973981 | None:intergenic | 20.0% |
| !!! | TTTTGCGAGATAAATTAAAT+TGG | + | chr5_4:65974104-65974123 | None:intergenic | 20.0% |
| !! | AACAAAAAAAAACTTGCATA+TGG | - | chr5_4:65974184-65974203 | Msa0865330:intron | 20.0% |
| !!! | TTTCATCTTGAAAGAATTTT+AGG | - | chr5_4:65974240-65974259 | Msa0865330:intron | 20.0% |
| !!! | ATTTTCCAAGTAATTTCTAT+GGG | - | chr5_4:65974753-65974772 | Msa0865330:intron | 20.0% |
| !!! | TTCTTCATTTTCTTCTATTT+GGG | + | chr5_4:65975327-65975346 | None:intergenic | 20.0% |
| !! | TTTATCAAAAAAATGAAAGC+TGG | - | chr5_4:65975479-65975498 | Msa0865330:CDS | 20.0% |
| ! | AAAATACCAATCAAACATGA+AGG | + | chr5_4:65973735-65973754 | None:intergenic | 25.0% |
| ! | GACTATTAGTATATTGTTAG+CGG | + | chr5_4:65973927-65973946 | None:intergenic | 25.0% |
| ! | TTTATATGATTCTCTACTTG+TGG | - | chr5_4:65974026-65974045 | Msa0865330:CDS | 25.0% |
| ! | TATGGATGAACCAAAAAAAA+AGG | - | chr5_4:65974202-65974221 | Msa0865330:intron | 25.0% |
| !!! | ATCTCTCACAATTTTGATTA+GGG | + | chr5_4:65974661-65974680 | None:intergenic | 25.0% |
| !!! | TATCTCTCACAATTTTGATT+AGG | + | chr5_4:65974662-65974681 | None:intergenic | 25.0% |
| !! | CATTTTCCAAGTAATTTCTA+TGG | - | chr5_4:65974752-65974771 | Msa0865330:intron | 25.0% |
| ! | ATAATGCAATAAAAGCAAGA+AGG | + | chr5_4:65975046-65975065 | None:intergenic | 25.0% |
| ! | ATAACGTTATCACCATAAAT+TGG | + | chr5_4:65975185-65975204 | None:intergenic | 25.0% |
| !! | AATTTATGGTGATAACGTTA+TGG | - | chr5_4:65975184-65975203 | Msa0865330:intron | 25.0% |
| !! | CAAACTATTTTCTTCTTCTT+GGG | + | chr5_4:65975219-65975238 | None:intergenic | 25.0% |
| !! | TCAAACTATTTTCTTCTTCT+TGG | + | chr5_4:65975220-65975239 | None:intergenic | 25.0% |
| !! | CTTCTTCATTTTCTTCTATT+TGG | + | chr5_4:65975328-65975347 | None:intergenic | 25.0% |
| ! | AAAATACCAATCAAACATGA+AGG | + | chr5_4:65973735-65973754 | None:intergenic | 25.0% |
| ! | GACTATTAGTATATTGTTAG+CGG | + | chr5_4:65973927-65973946 | None:intergenic | 25.0% |
| ! | TTTATATGATTCTCTACTTG+TGG | - | chr5_4:65974026-65974045 | Msa0865330:CDS | 25.0% |
| ! | TATGGATGAACCAAAAAAAA+AGG | - | chr5_4:65974202-65974221 | Msa0865330:intron | 25.0% |
| !!! | ATCTCTCACAATTTTGATTA+GGG | + | chr5_4:65974661-65974680 | None:intergenic | 25.0% |
| !!! | TATCTCTCACAATTTTGATT+AGG | + | chr5_4:65974662-65974681 | None:intergenic | 25.0% |
| !! | CATTTTCCAAGTAATTTCTA+TGG | - | chr5_4:65974752-65974771 | Msa0865330:intron | 25.0% |
| ! | ATAATGCAATAAAAGCAAGA+AGG | + | chr5_4:65975046-65975065 | None:intergenic | 25.0% |
| ! | ATAACGTTATCACCATAAAT+TGG | + | chr5_4:65975185-65975204 | None:intergenic | 25.0% |
| !! | AATTTATGGTGATAACGTTA+TGG | - | chr5_4:65975184-65975203 | Msa0865330:intron | 25.0% |
| !! | CAAACTATTTTCTTCTTCTT+GGG | + | chr5_4:65975219-65975238 | None:intergenic | 25.0% |
| !! | TCAAACTATTTTCTTCTTCT+TGG | + | chr5_4:65975220-65975239 | None:intergenic | 25.0% |
| !! | CTTCTTCATTTTCTTCTATT+TGG | + | chr5_4:65975328-65975347 | None:intergenic | 25.0% |
| TATGTCAAACTGGAAACTTT+AGG | - | chr5_4:65973511-65973530 | Msa0865330:CDS | 30.0% | |
| CAATTTCCTTCATGTTTGAT+TGG | - | chr5_4:65973726-65973745 | Msa0865330:CDS | 30.0% | |
| ! | ATTGTACACAATGTTACTTG+TGG | - | chr5_4:65973804-65973823 | Msa0865330:CDS | 30.0% |
| CAAATTATTGGGAAGCAAAA+AGG | + | chr5_4:65973851-65973870 | None:intergenic | 30.0% | |
| CCTACTCTAGTCAAATTATT+GGG | + | chr5_4:65973862-65973881 | None:intergenic | 30.0% | |
| TCCTACTCTAGTCAAATTAT+TGG | + | chr5_4:65973863-65973882 | None:intergenic | 30.0% | |
| TTAGCGGAATATTAGTCAAT+AGG | + | chr5_4:65973911-65973930 | None:intergenic | 30.0% | |
| TCTATATGCAAGTCAAGATT+TGG | + | chr5_4:65974162-65974181 | None:intergenic | 30.0% | |
| !!! | GTGTATGAGACCTTTTTTTT+TGG | + | chr5_4:65974215-65974234 | None:intergenic | 30.0% |
| ! | CATCTTGAAAGAATTTTAGG+TGG | - | chr5_4:65974243-65974262 | Msa0865330:intron | 30.0% |
| !! | TTTCTAAGATCTTCTGTTCA+TGG | + | chr5_4:65974307-65974326 | None:intergenic | 30.0% |
| ATGAACAGAAGATCTTAGAA+AGG | - | chr5_4:65974306-65974325 | Msa0865330:intron | 30.0% | |
| !!! | TGTTTTTAAGGGTGCTTAAT+AGG | - | chr5_4:65974370-65974389 | Msa0865330:intron | 30.0% |
| !!! | ACTTGGGATTTTTTTTCACT+CGG | - | chr5_4:65974577-65974596 | Msa0865330:intron | 30.0% |
| !!! | TCTCTCACAATTTTGATTAG+GGG | + | chr5_4:65974660-65974679 | None:intergenic | 30.0% |
| ! | CAATCTTGATGACTTAGATT+GGG | + | chr5_4:65974725-65974744 | None:intergenic | 30.0% |
| ! | ACAATCTTGATGACTTAGAT+TGG | + | chr5_4:65974726-65974745 | None:intergenic | 30.0% |
| CTATATATAGTGAAAGGTAG+GGG | + | chr5_4:65974797-65974816 | None:intergenic | 30.0% | |
| GCTATATATAGTGAAAGGTA+GGG | + | chr5_4:65974798-65974817 | None:intergenic | 30.0% | |
| TGCTATATATAGTGAAAGGT+AGG | + | chr5_4:65974799-65974818 | None:intergenic | 30.0% | |
| TTGCTGCTATATATAGTGAA+AGG | + | chr5_4:65974803-65974822 | None:intergenic | 30.0% | |
| GGTTAAAACAACATAAGACA+TGG | - | chr5_4:65974851-65974870 | Msa0865330:intron | 30.0% | |
| CTAAAGAATTGCATAAGGAA+TGG | + | chr5_4:65974981-65975000 | None:intergenic | 30.0% | |
| TGTAGCTAAAGAATTGCATA+AGG | + | chr5_4:65974986-65975005 | None:intergenic | 30.0% | |
| !!! | ATGTTCAATGTTTTGATGAG+TGG | + | chr5_4:65975099-65975118 | None:intergenic | 30.0% |
| CTGATATGTAAAATTCGAAC+CGG | + | chr5_4:65975145-65975164 | None:intergenic | 30.0% | |
| GAGATTACAGAACCAATTTA+TGG | - | chr5_4:65975170-65975189 | Msa0865330:intron | 30.0% | |
| ! | AGAAGAAGAAGTACAAAAAG+AGG | - | chr5_4:65975394-65975413 | Msa0865330:intron | 30.0% |
| ! | GAAGAAGAAGTACAAAAAGA+GGG | - | chr5_4:65975395-65975414 | Msa0865330:intron | 30.0% |
| GAAACTAAACAAGAAATGTG+AGG | - | chr5_4:65975454-65975473 | Msa0865330:intron | 30.0% | |
| TATGTCAAACTGGAAACTTT+AGG | - | chr5_4:65973511-65973530 | Msa0865330:CDS | 30.0% | |
| CAATTTCCTTCATGTTTGAT+TGG | - | chr5_4:65973726-65973745 | Msa0865330:CDS | 30.0% | |
| ! | ATTGTACACAATGTTACTTG+TGG | - | chr5_4:65973804-65973823 | Msa0865330:CDS | 30.0% |
| CAAATTATTGGGAAGCAAAA+AGG | + | chr5_4:65973851-65973870 | None:intergenic | 30.0% | |
| CCTACTCTAGTCAAATTATT+GGG | + | chr5_4:65973862-65973881 | None:intergenic | 30.0% | |
| TCCTACTCTAGTCAAATTAT+TGG | + | chr5_4:65973863-65973882 | None:intergenic | 30.0% | |
| TTAGCGGAATATTAGTCAAT+AGG | + | chr5_4:65973911-65973930 | None:intergenic | 30.0% | |
| TCTATATGCAAGTCAAGATT+TGG | + | chr5_4:65974162-65974181 | None:intergenic | 30.0% | |
| !!! | GTGTATGAGACCTTTTTTTT+TGG | + | chr5_4:65974215-65974234 | None:intergenic | 30.0% |
| ! | CATCTTGAAAGAATTTTAGG+TGG | - | chr5_4:65974243-65974262 | Msa0865330:intron | 30.0% |
| !! | TTTCTAAGATCTTCTGTTCA+TGG | + | chr5_4:65974307-65974326 | None:intergenic | 30.0% |
| ATGAACAGAAGATCTTAGAA+AGG | - | chr5_4:65974306-65974325 | Msa0865330:intron | 30.0% | |
| !!! | TGTTTTTAAGGGTGCTTAAT+AGG | - | chr5_4:65974370-65974389 | Msa0865330:intron | 30.0% |
| !!! | ACTTGGGATTTTTTTTCACT+CGG | - | chr5_4:65974577-65974596 | Msa0865330:intron | 30.0% |
| !!! | TCTCTCACAATTTTGATTAG+GGG | + | chr5_4:65974660-65974679 | None:intergenic | 30.0% |
| ! | CAATCTTGATGACTTAGATT+GGG | + | chr5_4:65974725-65974744 | None:intergenic | 30.0% |
| ! | ACAATCTTGATGACTTAGAT+TGG | + | chr5_4:65974726-65974745 | None:intergenic | 30.0% |
| CTATATATAGTGAAAGGTAG+GGG | + | chr5_4:65974797-65974816 | None:intergenic | 30.0% | |
| GCTATATATAGTGAAAGGTA+GGG | + | chr5_4:65974798-65974817 | None:intergenic | 30.0% | |
| TGCTATATATAGTGAAAGGT+AGG | + | chr5_4:65974799-65974818 | None:intergenic | 30.0% | |
| TTGCTGCTATATATAGTGAA+AGG | + | chr5_4:65974803-65974822 | None:intergenic | 30.0% | |
| GGTTAAAACAACATAAGACA+TGG | - | chr5_4:65974851-65974870 | Msa0865330:intron | 30.0% | |
| CTAAAGAATTGCATAAGGAA+TGG | + | chr5_4:65974981-65975000 | None:intergenic | 30.0% | |
| TGTAGCTAAAGAATTGCATA+AGG | + | chr5_4:65974986-65975005 | None:intergenic | 30.0% | |
| !!! | ATGTTCAATGTTTTGATGAG+TGG | + | chr5_4:65975099-65975118 | None:intergenic | 30.0% |
| CTGATATGTAAAATTCGAAC+CGG | + | chr5_4:65975145-65975164 | None:intergenic | 30.0% | |
| GAGATTACAGAACCAATTTA+TGG | - | chr5_4:65975170-65975189 | Msa0865330:intron | 30.0% | |
| ! | AGAAGAAGAAGTACAAAAAG+AGG | - | chr5_4:65975394-65975413 | Msa0865330:intron | 30.0% |
| ! | GAAGAAGAAGTACAAAAAGA+GGG | - | chr5_4:65975395-65975414 | Msa0865330:intron | 30.0% |
| GAAACTAAACAAGAAATGTG+AGG | - | chr5_4:65975454-65975473 | Msa0865330:intron | 30.0% | |
| ACAAAATGTTGCGTGTATTC+AGG | - | chr5_4:65973647-65973666 | Msa0865330:CDS | 35.0% | |
| CAAAATGTTGCGTGTATTCA+GGG | - | chr5_4:65973648-65973667 | Msa0865330:CDS | 35.0% | |
| AAAATGTTGCGTGTATTCAG+GGG | - | chr5_4:65973649-65973668 | Msa0865330:CDS | 35.0% | |
| ATTGTTCCATCATGAAGAGT+TGG | + | chr5_4:65973710-65973729 | None:intergenic | 35.0% | |
| TTGGGAAGCAAAAAGGAAAT+AGG | + | chr5_4:65973844-65973863 | None:intergenic | 35.0% | |
| CCCAATAATTTGACTAGAGT+AGG | - | chr5_4:65973859-65973878 | Msa0865330:CDS | 35.0% | |
| TATCTCGCAAAATTGCTCTT+TGG | - | chr5_4:65974112-65974131 | Msa0865330:intron | 35.0% | |
| ! | TTAGAAAGGCACACATGTTT+AGG | - | chr5_4:65974320-65974339 | Msa0865330:intron | 35.0% |
| GGCTGATTAGTGAATACAAT+TGG | - | chr5_4:65974391-65974410 | Msa0865330:intron | 35.0% | |
| AAAATGCTAGTTGACTGACT+TGG | - | chr5_4:65974560-65974579 | Msa0865330:intron | 35.0% | |
| ! | AAATGCTAGTTGACTGACTT+GGG | - | chr5_4:65974561-65974580 | Msa0865330:intron | 35.0% |
| AAAAAGCTAGTTGACTGACT+TGG | - | chr5_4:65974626-65974645 | Msa0865330:intron | 35.0% | |
| ! | AAAAGCTAGTTGACTGACTT+GGG | - | chr5_4:65974627-65974646 | Msa0865330:intron | 35.0% |
| ATGACTTAGATTGGGTGAAA+AGG | + | chr5_4:65974717-65974736 | None:intergenic | 35.0% | |
| CACAGCATATTCAAGGTTTA+AGG | - | chr5_4:65974830-65974849 | Msa0865330:intron | 35.0% | |
| GATAGTGAAACCAGAAAATG+TGG | - | chr5_4:65975241-65975260 | Msa0865330:intron | 35.0% | |
| ! | GCTTCAATAACCACATTTTC+TGG | + | chr5_4:65975254-65975273 | None:intergenic | 35.0% |
| ATTGAAGCAGAAGAAGATGA+AGG | - | chr5_4:65975266-65975285 | Msa0865330:intron | 35.0% | |
| AGAAGATGAAGGAAAAGAAG+AGG | - | chr5_4:65975277-65975296 | Msa0865330:intron | 35.0% | |
| GAAGATGAAGGAAAAGAAGA+GGG | - | chr5_4:65975278-65975297 | Msa0865330:intron | 35.0% | |
| ACAAAATGTTGCGTGTATTC+AGG | - | chr5_4:65973647-65973666 | Msa0865330:CDS | 35.0% | |
| CAAAATGTTGCGTGTATTCA+GGG | - | chr5_4:65973648-65973667 | Msa0865330:CDS | 35.0% | |
| AAAATGTTGCGTGTATTCAG+GGG | - | chr5_4:65973649-65973668 | Msa0865330:CDS | 35.0% | |
| ATTGTTCCATCATGAAGAGT+TGG | + | chr5_4:65973710-65973729 | None:intergenic | 35.0% | |
| TTGGGAAGCAAAAAGGAAAT+AGG | + | chr5_4:65973844-65973863 | None:intergenic | 35.0% | |
| CCCAATAATTTGACTAGAGT+AGG | - | chr5_4:65973859-65973878 | Msa0865330:CDS | 35.0% | |
| TATCTCGCAAAATTGCTCTT+TGG | - | chr5_4:65974112-65974131 | Msa0865330:intron | 35.0% | |
| ! | TTAGAAAGGCACACATGTTT+AGG | - | chr5_4:65974320-65974339 | Msa0865330:intron | 35.0% |
| GGCTGATTAGTGAATACAAT+TGG | - | chr5_4:65974391-65974410 | Msa0865330:intron | 35.0% | |
| AAAATGCTAGTTGACTGACT+TGG | - | chr5_4:65974560-65974579 | Msa0865330:intron | 35.0% | |
| ! | AAATGCTAGTTGACTGACTT+GGG | - | chr5_4:65974561-65974580 | Msa0865330:intron | 35.0% |
| AAAAAGCTAGTTGACTGACT+TGG | - | chr5_4:65974626-65974645 | Msa0865330:intron | 35.0% | |
| ! | AAAAGCTAGTTGACTGACTT+GGG | - | chr5_4:65974627-65974646 | Msa0865330:intron | 35.0% |
| ATGACTTAGATTGGGTGAAA+AGG | + | chr5_4:65974717-65974736 | None:intergenic | 35.0% | |
| CACAGCATATTCAAGGTTTA+AGG | - | chr5_4:65974830-65974849 | Msa0865330:intron | 35.0% | |
| GATAGTGAAACCAGAAAATG+TGG | - | chr5_4:65975241-65975260 | Msa0865330:intron | 35.0% | |
| ! | GCTTCAATAACCACATTTTC+TGG | + | chr5_4:65975254-65975273 | None:intergenic | 35.0% |
| ATTGAAGCAGAAGAAGATGA+AGG | - | chr5_4:65975266-65975285 | Msa0865330:intron | 35.0% | |
| AGAAGATGAAGGAAAAGAAG+AGG | - | chr5_4:65975277-65975296 | Msa0865330:intron | 35.0% | |
| GAAGATGAAGGAAAAGAAGA+GGG | - | chr5_4:65975278-65975297 | Msa0865330:intron | 35.0% | |
| CTCAATGCATAACAACTTCC+CGG | + | chr5_4:65973571-65973590 | None:intergenic | 40.0% | |
| ACACTTCCAACTCTTCATGA+TGG | - | chr5_4:65973701-65973720 | Msa0865330:CDS | 40.0% | |
| ! | AGATTTGGAATGACAGCGAA+CGG | + | chr5_4:65974147-65974166 | None:intergenic | 40.0% |
| TTGGGTGAAAAGGAACATGT+GGG | + | chr5_4:65974707-65974726 | None:intergenic | 40.0% | |
| ATTGGGTGAAAAGGAACATG+TGG | + | chr5_4:65974708-65974727 | None:intergenic | 40.0% | |
| GACATGTCACAGCATATTCA+AGG | - | chr5_4:65974823-65974842 | Msa0865330:intron | 40.0% | |
| TTCAAGGACTGAGAGAGTAA+AGG | + | chr5_4:65974957-65974976 | None:intergenic | 40.0% | |
| TTGCATAAGGAATGGCTTCA+AGG | + | chr5_4:65974973-65974992 | None:intergenic | 40.0% | |
| CAAGAAGGATATTGCAGAGA+AGG | + | chr5_4:65975031-65975050 | None:intergenic | 40.0% | |
| !! | TGATGAGTGGTTGATGAAGA+GGG | + | chr5_4:65975086-65975105 | None:intergenic | 40.0% |
| !! | TTGATGAGTGGTTGATGAAG+AGG | + | chr5_4:65975087-65975106 | None:intergenic | 40.0% |
| AGAAGAGGGAAATGCTCTTA+TGG | - | chr5_4:65975292-65975311 | Msa0865330:intron | 40.0% | |
| AGTGAAGAGTTTCGTGATAG+TGG | - | chr5_4:65975346-65975365 | Msa0865330:intron | 40.0% | |
| CTCAATGCATAACAACTTCC+CGG | + | chr5_4:65973571-65973590 | None:intergenic | 40.0% | |
| ACACTTCCAACTCTTCATGA+TGG | - | chr5_4:65973701-65973720 | Msa0865330:CDS | 40.0% | |
| ! | AGATTTGGAATGACAGCGAA+CGG | + | chr5_4:65974147-65974166 | None:intergenic | 40.0% |
| TTGGGTGAAAAGGAACATGT+GGG | + | chr5_4:65974707-65974726 | None:intergenic | 40.0% | |
| ATTGGGTGAAAAGGAACATG+TGG | + | chr5_4:65974708-65974727 | None:intergenic | 40.0% | |
| GACATGTCACAGCATATTCA+AGG | - | chr5_4:65974823-65974842 | Msa0865330:intron | 40.0% | |
| TTCAAGGACTGAGAGAGTAA+AGG | + | chr5_4:65974957-65974976 | None:intergenic | 40.0% | |
| TTGCATAAGGAATGGCTTCA+AGG | + | chr5_4:65974973-65974992 | None:intergenic | 40.0% | |
| CAAGAAGGATATTGCAGAGA+AGG | + | chr5_4:65975031-65975050 | None:intergenic | 40.0% | |
| !! | TGATGAGTGGTTGATGAAGA+GGG | + | chr5_4:65975086-65975105 | None:intergenic | 40.0% |
| !! | TTGATGAGTGGTTGATGAAG+AGG | + | chr5_4:65975087-65975106 | None:intergenic | 40.0% |
| AGAAGAGGGAAATGCTCTTA+TGG | - | chr5_4:65975292-65975311 | Msa0865330:intron | 40.0% | |
| AGTGAAGAGTTTCGTGATAG+TGG | - | chr5_4:65975346-65975365 | Msa0865330:intron | 40.0% | |
| TAGTGCTGCGAATATGATGC+CGG | - | chr5_4:65973549-65973568 | Msa0865330:CDS | 45.0% | |
| TCTCATATTCCCACCTGCTT+GGG | + | chr5_4:65973597-65973616 | None:intergenic | 45.0% | |
| GTGGGCACGAAGAAATTACT+TGG | + | chr5_4:65974689-65974708 | None:intergenic | 45.0% | |
| GTGGGCCCATAGAAATTACT+TGG | + | chr5_4:65974761-65974780 | None:intergenic | 45.0% | |
| AGGGGTGAAAATGAACGTGT+GGG | + | chr5_4:65974779-65974798 | None:intergenic | 45.0% | |
| TAGGGGTGAAAATGAACGTG+TGG | + | chr5_4:65974780-65974799 | None:intergenic | 45.0% | |
| TAGTGCTGCGAATATGATGC+CGG | - | chr5_4:65973549-65973568 | Msa0865330:CDS | 45.0% | |
| TCTCATATTCCCACCTGCTT+GGG | + | chr5_4:65973597-65973616 | None:intergenic | 45.0% | |
| GTGGGCACGAAGAAATTACT+TGG | + | chr5_4:65974689-65974708 | None:intergenic | 45.0% | |
| GTGGGCCCATAGAAATTACT+TGG | + | chr5_4:65974761-65974780 | None:intergenic | 45.0% | |
| AGGGGTGAAAATGAACGTGT+GGG | + | chr5_4:65974779-65974798 | None:intergenic | 45.0% | |
| TAGGGGTGAAAATGAACGTG+TGG | + | chr5_4:65974780-65974799 | None:intergenic | 45.0% | |
| AGTGCTGCGAATATGATGCC+GGG | - | chr5_4:65973550-65973569 | Msa0865330:CDS | 50.0% | |
| ATGCATTGAGCAACCCAAGC+AGG | - | chr5_4:65973581-65973600 | Msa0865330:CDS | 50.0% | |
| ATTGAGCAACCCAAGCAGGT+GGG | - | chr5_4:65973585-65973604 | Msa0865330:CDS | 50.0% | |
| CTCTCATATTCCCACCTGCT+TGG | + | chr5_4:65973598-65973617 | None:intergenic | 50.0% | |
| ! | TTTGGAATGACAGCGAACGG+TGG | + | chr5_4:65974144-65974163 | None:intergenic | 50.0% |
| TCGACAGCGACAAGAGTAAC+CGG | - | chr5_4:65975123-65975142 | Msa0865330:intron | 50.0% | |
| AGTGCTGCGAATATGATGCC+GGG | - | chr5_4:65973550-65973569 | Msa0865330:CDS | 50.0% | |
| ATGCATTGAGCAACCCAAGC+AGG | - | chr5_4:65973581-65973600 | Msa0865330:CDS | 50.0% | |
| ATTGAGCAACCCAAGCAGGT+GGG | - | chr5_4:65973585-65973604 | Msa0865330:CDS | 50.0% | |
| CTCTCATATTCCCACCTGCT+TGG | + | chr5_4:65973598-65973617 | None:intergenic | 50.0% | |
| ! | TTTGGAATGACAGCGAACGG+TGG | + | chr5_4:65974144-65974163 | None:intergenic | 50.0% |
| TCGACAGCGACAAGAGTAAC+CGG | - | chr5_4:65975123-65975142 | Msa0865330:intron | 50.0% | |
| CATTGAGCAACCCAAGCAGG+TGG | - | chr5_4:65973584-65973603 | Msa0865330:CDS | 55.0% | |
| GGTTACTCTTGTCGCTGTCG+AGG | + | chr5_4:65975124-65975143 | None:intergenic | 55.0% | |
| CATTGAGCAACCCAAGCAGG+TGG | - | chr5_4:65973584-65973603 | Msa0865330:CDS | 55.0% | |
| GGTTACTCTTGTCGCTGTCG+AGG | + | chr5_4:65975124-65975143 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 65973505 | 65975577 | 65973505 | ID=Msa0865330;Name=Msa0865330 |
| chr5_4 | mRNA | 65973505 | 65975577 | 65973505 | ID=Msa0865330-mRNA-1;Parent=Msa0865330;Name=Msa0865330-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|2|0|242 |
| chr5_4 | exon | 65975458 | 65975577 | 65975458 | ID=Msa0865330-mRNA-1:exon:20852;Parent=Msa0865330-mRNA-1 |
| chr5_4 | exon | 65973505 | 65974113 | 65973505 | ID=Msa0865330-mRNA-1:exon:20851;Parent=Msa0865330-mRNA-1 |
| chr5_4 | CDS | 65975458 | 65975577 | 65975458 | ID=Msa0865330-mRNA-1:cds;Parent=Msa0865330-mRNA-1 |
| chr5_4 | CDS | 65973505 | 65974113 | 65973505 | ID=Msa0865330-mRNA-1:cds;Parent=Msa0865330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
