AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236730 MtrunA17_Chr8g0347251 92.571 350 20 3 1 346 1 348 0.0 621
Msa1236730 MtrunA17_Chr7g0275531 43.514 370 136 14 1 343 1 324 3.12e-77 240
Msa1236730 MtrunA17_Chr3g0126391 35.714 350 182 13 12 340 7 334 1.33e-51 174
Msa1236730 MtrunA17_Chr8g0387981 33.690 374 189 11 1 340 1 349 2.34e-50 171
Msa1236730 MtrunA17_Chr7g0244971 32.984 191 100 5 12 197 15 182 1.55e-22 95.9
Msa1236730 MtrunA17_Chr7g0244981 33.690 187 104 4 12 197 14 181 3.05e-22 94.7
Msa1236730 MtrunA17_Chr3g0128671 55.224 67 30 0 131 197 120 186 4.57e-20 89.4
Msa1236730 MtrunA17_Chr8g0350621 31.148 183 104 4 15 197 10 170 4.96e-19 85.5
Msa1236730 MtrunA17_Chr7g0270051 40.972 144 66 6 93 231 3 132 1.27e-18 84.3
Msa1236730 MtrunA17_Chr5g0428351 47.222 72 38 0 131 202 176 247 1.23e-17 82.4
Msa1236730 MtrunA17_Chr8g0334541 44.444 90 43 1 112 201 84 166 1.49e-17 81.6
Msa1236730 MtrunA17_Chr2g0315361 43.158 95 45 2 107 200 124 210 2.19e-17 81.6
Msa1236730 MtrunA17_Chr2g0315381 34.783 138 78 3 112 245 125 254 6.69e-17 80.1
Msa1236730 MtrunA17_Chr7g0224801 56.667 60 23 1 137 196 92 148 9.81e-17 77.0
Msa1236730 MtrunA17_Chr2g0315371 26.471 204 113 6 15 200 19 203 6.29e-16 77.4
Msa1236730 MtrunA17_Chr4g0071521 41.935 93 51 2 108 200 216 305 6.82e-16 77.4
Msa1236730 MtrunA17_Chr8g0387501 43.836 73 39 1 131 203 122 192 1.09e-15 76.3
Msa1236730 MtrunA17_Chr1g0147881 42.697 89 48 2 110 198 235 320 1.30e-15 77.0
Msa1236730 MtrunA17_Chr2g0293481 32.857 140 75 4 107 237 239 368 4.39e-15 76.3
Msa1236730 MtrunA17_Chr7g0270191 29.508 183 98 6 113 292 119 273 1.29e-14 73.6
Msa1236730 MtrunA17_Chr4g0042831 51.724 58 25 1 138 195 145 199 1.58e-14 73.9
Msa1236730 MtrunA17_Chr4g0042831 45.763 59 29 1 137 195 277 332 2.55e-11 64.3
Msa1236730 MtrunA17_Chr5g0401821 44.186 86 45 2 110 195 172 254 2.56e-14 72.4
Msa1236730 MtrunA17_Chr8g0379461 30.348 201 109 10 113 297 45 230 2.73e-14 71.6
Msa1236730 MtrunA17_Chr8g0386241 47.458 59 28 1 137 195 102 157 2.93e-14 70.5
Msa1236730 MtrunA17_Chr7g0249311 35.537 121 60 4 80 195 125 232 4.83e-14 73.2
Msa1236730 MtrunA17_Chr2g0284321 31.624 117 73 2 112 228 9 118 5.36e-14 70.5
Msa1236730 MtrunA17_Chr7g0248691 28.358 201 122 5 98 287 114 303 5.62e-14 72.0
Msa1236730 MtrunA17_Chr7g0218081 41.304 92 42 5 137 226 227 308 5.88e-14 72.8
Msa1236730 MtrunA17_Chr7g0218081 44.068 59 30 1 137 195 409 464 3.93e-11 63.9
Msa1236730 MtrunA17_Chr8g0348311 38.000 100 60 1 97 196 114 211 9.98e-14 71.2
Msa1236730 MtrunA17_Chr5g0431811 47.619 63 33 0 138 200 672 734 1.21e-13 72.4
Msa1236730 MtrunA17_Chr1g0202461 40.476 84 43 2 112 195 240 316 1.72e-13 70.9
Msa1236730 MtrunA17_Chr5g0443131 49.153 59 27 1 137 195 156 211 1.93e-13 70.1
Msa1236730 MtrunA17_Chr3g0079691 53.448 58 23 2 138 195 280 333 2.03e-13 71.2
Msa1236730 MtrunA17_Chr4g0053281 43.678 87 45 3 110 195 238 321 2.08e-13 70.5
Msa1236730 MtrunA17_Chr1g0194481 38.298 94 50 2 103 196 128 213 2.67e-13 69.7
Msa1236730 MtrunA17_Chr5g0418781 50.847 59 26 1 137 195 123 178 4.20e-13 68.9
Msa1236730 MtrunA17_Chr2g0294231 48.333 60 28 1 137 196 202 258 5.25e-13 69.3
Msa1236730 MtrunA17_Chr7g0238921 31.646 158 83 5 56 195 28 178 5.93e-13 68.9
Msa1236730 MtrunA17_Chr4g0051881 49.153 59 27 1 137 195 177 232 6.23e-13 68.9
Msa1236730 MtrunA17_Chr5g0445311 48.571 70 30 3 128 195 188 253 6.85e-13 69.7
Msa1236730 MtrunA17_Chr5g0445311 44.068 59 30 1 137 195 363 418 3.73e-11 64.3
Msa1236730 MtrunA17_Chr3g0101131 49.231 65 29 2 131 195 236 296 1.08e-12 68.9
Msa1236730 MtrunA17_Chr3g0101131 38.462 91 46 3 112 195 382 469 3.69e-11 64.3
Msa1236730 MtrunA17_Chr8g0383351 42.466 73 39 1 137 209 159 228 1.12e-12 67.0
Msa1236730 MtrunA17_Chr7g0270831 49.275 69 28 2 137 205 215 276 1.46e-12 68.2
Msa1236730 MtrunA17_Chr5g0418191 42.045 88 42 3 137 224 150 228 1.64e-12 68.2
Msa1236730 MtrunA17_Chr5g0418191 44.068 59 30 1 137 195 319 374 2.01e-11 64.7
Msa1236730 MtrunA17_Chr7g0248721 40.964 83 40 3 113 195 121 194 2.14e-12 65.9
Msa1236730 MtrunA17_Chr2g0288871 49.275 69 28 2 137 205 304 365 2.50e-12 67.8
Msa1236730 MtrunA17_Chr3g0129361 42.466 73 39 1 137 209 143 212 2.62e-12 65.5
Msa1236730 MtrunA17_Chr2g0322391 52.542 59 26 1 137 195 348 404 2.68e-12 67.8
Msa1236730 MtrunA17_Chr7g0263531 50.877 57 24 2 139 195 190 242 3.40e-12 67.0
Msa1236730 MtrunA17_Chr2g0319961 36.082 97 52 3 102 195 46 135 4.85e-12 65.5
Msa1236730 MtrunA17_Chr4g0075201 51.667 60 27 1 137 196 266 323 6.38e-12 66.6
Msa1236730 MtrunA17_Chr4g0068541 45.763 59 29 1 137 195 207 262 6.91e-12 66.2
Msa1236730 MtrunA17_Chr7g0228941 44.595 74 38 2 122 195 37 107 7.41e-12 62.0
Msa1236730 MtrunA17_Chr8g0335811 45.588 68 31 2 137 201 153 217 8.45e-12 64.3
Msa1236730 MtrunA17_Chr5g0447701 46.154 65 32 1 131 195 245 306 9.30e-12 65.9
Msa1236730 MtrunA17_Chr4g0004911 36.364 110 51 4 109 211 152 249 1.04e-11 65.9
Msa1236730 MtrunA17_Chr7g0243891 47.222 72 32 3 138 207 216 283 1.22e-11 65.9
Msa1236730 MtrunA17_Chr3g0139021 48.387 62 30 1 139 200 315 374 1.38e-11 65.1
Msa1236730 MtrunA17_Chr3g0136961 47.458 59 29 1 137 195 137 193 1.46e-11 64.3
Msa1236730 MtrunA17_Chr1g0184691 47.368 57 28 1 139 195 294 348 1.54e-11 64.7
Msa1236730 MtrunA17_Chr3g0106491 45.000 60 30 1 137 196 364 420 2.17e-11 64.7
Msa1236730 MtrunA17_Chr3g0106491 34.146 123 65 4 138 260 198 304 8.00e-11 63.2
Msa1236730 MtrunA17_Chr1g0150281 50.847 59 27 1 137 195 139 195 2.25e-11 63.9
Msa1236730 MtrunA17_Chr7g0249301 35.000 100 57 3 129 224 53 148 2.82e-11 64.3
Msa1236730 MtrunA17_Chr5g0432161 48.276 58 26 2 138 195 244 297 5.26e-11 63.9
Msa1236730 MtrunA17_Chr1g0150801 36.709 79 44 2 121 196 82 157 5.89e-11 60.5
Msa1236730 MtrunA17_Chr2g0333851 35.955 89 52 2 126 211 154 240 7.91e-11 62.4
Msa1236730 MtrunA17_Chr4g0051181 46.479 71 31 2 135 205 240 303 8.81e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236730 AT4G23810.1 37.931 232 106 6 2 205 4 225 1.91e-40 145
Msa1236730 AT2G46400.1 35.125 279 135 8 8 274 4 248 8.68e-39 140
Msa1236730 AT5G24110.1 37.778 180 96 4 95 271 72 238 2.38e-38 139
Msa1236730 AT4G11070.1 38.683 243 110 6 3 224 2 226 3.35e-38 139
Msa1236730 AT4G11070.2 51.493 134 58 3 95 224 64 194 3.50e-37 135
Msa1236730 AT2G40750.1 49.020 102 46 2 113 209 122 222 1.32e-23 100
Msa1236730 AT3G56400.1 30.435 207 119 3 6 208 5 190 1.87e-23 99.0
Msa1236730 AT2G40740.1 53.968 63 29 0 138 200 173 235 7.11e-20 89.0
Msa1236730 AT2G40740.3 53.968 63 29 0 138 200 182 244 8.84e-20 88.6
Msa1236730 AT5G45260.1 34.682 173 93 4 52 220 1129 1285 8.90e-19 88.2
Msa1236730 AT2G23320.1 35.897 117 64 3 79 195 190 295 1.96e-15 76.6
Msa1236730 AT4G24240.1 34.524 168 86 7 31 195 190 336 2.61e-15 76.6
Msa1236730 AT2G30590.1 40.404 99 52 3 110 208 286 377 6.50e-15 75.5
Msa1236730 AT4G31550.1 40.594 101 57 2 100 200 209 306 1.13e-14 74.3
Msa1236730 AT2G24570.1 41.121 107 57 3 110 213 216 319 1.48e-14 73.9
Msa1236730 AT5G52830.1 43.529 85 41 2 112 196 144 221 1.51e-14 74.3
Msa1236730 AT4G23550.1 33.051 118 72 2 104 221 106 216 1.63e-14 73.6
Msa1236730 AT1G66550.1 32.335 167 97 4 51 214 33 186 3.23e-14 72.0
Msa1236730 AT4G01250.1 44.048 84 39 2 112 195 108 183 3.37e-14 72.8
Msa1236730 AT2G03340.1 46.667 75 31 3 133 207 245 310 3.37e-14 73.9
Msa1236730 AT4G31550.2 44.318 88 46 2 113 200 221 305 3.48e-14 72.8
Msa1236730 AT5G28650.1 44.186 86 45 2 110 195 235 317 5.83e-14 72.4
Msa1236730 AT1G69310.4 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1236730 AT1G69310.2 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1236730 AT1G69310.1 36.893 103 56 3 98 200 112 205 7.28e-14 71.6
Msa1236730 AT1G66550.2 43.590 78 42 1 139 214 104 181 7.83e-14 70.9
Msa1236730 AT3G58710.2 42.157 102 51 4 99 195 27 125 1.29e-13 70.5
Msa1236730 AT5G49520.1 48.333 60 28 1 137 196 220 276 1.34e-13 71.6
Msa1236730 AT1G29280.1 35.897 117 58 4 82 195 27 129 1.49e-13 70.1
Msa1236730 AT1G66600.1 39.726 73 44 0 125 197 90 162 1.51e-13 70.1
Msa1236730 AT2G34830.2 33.577 137 80 3 68 195 145 279 1.95e-13 71.2
Msa1236730 AT3G58710.1 40.196 102 54 3 99 195 27 126 2.17e-13 70.1
Msa1236730 AT2G34830.1 33.577 137 80 3 68 195 136 270 2.26e-13 71.2
Msa1236730 AT2G37260.3 40.244 82 46 1 114 195 245 323 2.42e-13 70.5
Msa1236730 AT2G37260.3 40.659 91 46 4 118 208 69 151 6.36e-12 66.2
Msa1236730 AT1G30650.1 40.449 89 48 2 107 195 189 272 2.59e-13 70.9
Msa1236730 AT4G18170.1 42.045 88 47 2 109 195 142 226 2.74e-13 70.1
Msa1236730 AT2G37260.2 40.244 82 46 1 114 195 243 321 2.75e-13 70.5
Msa1236730 AT2G37260.2 40.659 91 46 4 118 208 67 149 7.29e-12 66.2
Msa1236730 AT1G13960.1 46.575 73 30 3 137 209 228 291 2.92e-13 70.9
Msa1236730 AT1G13960.1 44.068 59 30 1 137 195 408 463 2.43e-11 65.1
Msa1236730 AT2G37260.1 40.244 82 46 1 114 195 325 403 3.02e-13 70.9
Msa1236730 AT2G37260.1 40.659 91 46 4 118 208 149 231 5.72e-12 67.0
Msa1236730 AT5G13080.1 50.000 60 27 1 137 196 66 122 3.32e-13 66.6
Msa1236730 AT4G01720.1 39.823 113 58 4 95 205 195 299 3.71e-13 70.9
Msa1236730 AT1G29860.1 40.909 88 43 3 123 209 120 199 4.22e-13 69.3
Msa1236730 AT3G04670.1 43.023 86 46 2 110 195 235 317 4.47e-13 69.7
Msa1236730 AT1G13960.2 46.575 73 30 3 137 209 75 138 4.80e-13 69.7
Msa1236730 AT1G13960.2 44.068 59 30 1 137 195 255 310 3.97e-11 63.9
Msa1236730 AT3G01970.1 50.000 60 27 1 137 196 64 120 5.04e-13 66.2
Msa1236730 AT1G66560.1 38.158 76 47 0 122 197 87 162 6.25e-13 68.2
Msa1236730 AT2G04880.2 47.458 59 28 1 137 195 282 337 7.58e-13 69.7
Msa1236730 AT2G04880.1 47.458 59 28 1 137 195 306 361 9.00e-13 69.3
Msa1236730 AT2G47260.1 40.476 84 47 1 137 220 173 253 1.93e-12 67.8
Msa1236730 AT4G26640.7 38.889 90 39 3 137 226 340 413 1.98e-12 68.6
Msa1236730 AT4G26640.7 49.153 59 26 2 137 195 170 224 1.22e-11 66.2
Msa1236730 AT3G01080.3 50.847 59 25 2 137 195 204 258 2.08e-12 67.8
Msa1236730 AT4G26440.1 42.045 88 41 4 137 224 177 254 2.27e-12 68.6
Msa1236730 AT4G26440.1 48.333 60 28 1 137 196 371 427 1.98e-11 65.5
Msa1236730 AT4G26640.2 38.889 90 39 3 137 226 380 453 2.28e-12 68.6
Msa1236730 AT4G26640.2 49.153 59 26 2 137 195 210 264 1.40e-11 65.9
Msa1236730 AT4G26640.1 38.889 90 39 3 137 226 308 381 2.54e-12 68.2
Msa1236730 AT4G26640.1 49.153 59 26 2 137 195 138 192 1.58e-11 65.9
Msa1236730 AT2G46130.1 47.458 59 28 1 137 195 29 84 2.66e-12 63.2
Msa1236730 AT4G26640.5 38.889 90 39 3 137 226 204 277 2.98e-12 67.4
Msa1236730 AT4G26640.5 49.153 59 26 2 137 195 34 88 1.79e-11 65.1
Msa1236730 AT4G26640.6 38.889 90 39 3 137 226 204 277 2.98e-12 67.4
Msa1236730 AT4G26640.6 49.153 59 26 2 137 195 34 88 1.79e-11 65.1
Msa1236730 AT4G26640.4 38.889 90 39 3 137 226 204 277 2.98e-12 67.4
Msa1236730 AT4G26640.4 49.153 59 26 2 137 195 34 88 1.79e-11 65.1
Msa1236730 AT4G26640.3 38.889 90 39 3 137 226 204 277 2.98e-12 67.4
Msa1236730 AT4G26640.3 49.153 59 26 2 137 195 34 88 1.79e-11 65.1
Msa1236730 AT2G25000.3 38.298 94 50 2 136 229 123 208 3.72e-12 65.9
Msa1236730 AT2G25000.2 38.298 94 50 2 136 229 101 186 3.83e-12 65.5
Msa1236730 AT2G25000.4 38.298 94 50 2 136 229 101 186 3.83e-12 65.5
Msa1236730 AT5G46350.1 37.363 91 47 3 137 225 182 264 4.00e-12 66.6
Msa1236730 AT3G01080.2 50.847 59 25 2 137 195 204 258 4.27e-12 67.4
Msa1236730 AT4G04450.2 49.275 69 28 2 137 205 197 258 4.70e-12 67.0
Msa1236730 AT4G39410.1 38.202 89 52 1 113 201 198 283 4.97e-12 66.2
Msa1236730 AT2G25000.1 38.298 94 50 2 136 229 144 229 5.25e-12 65.9
Msa1236730 AT5G56270.1 48.438 64 29 2 132 195 267 326 5.27e-12 67.4
Msa1236730 AT3G01080.1 50.847 59 25 2 137 195 166 220 5.53e-12 67.0
Msa1236730 AT2G30250.1 52.632 57 24 1 139 195 329 382 6.18e-12 66.6
Msa1236730 AT1G62300.1 49.275 69 28 2 137 205 311 372 6.48e-12 67.0
Msa1236730 AT4G04450.1 49.275 69 28 2 137 205 291 352 7.40e-12 66.6
Msa1236730 AT2G44745.1 47.458 59 28 1 137 195 144 199 9.08e-12 64.3
Msa1236730 AT4G22070.4 42.553 94 44 3 112 205 274 357 1.23e-11 66.2
Msa1236730 AT4G22070.3 42.553 94 44 3 112 205 274 357 1.23e-11 66.2
Msa1236730 AT4G22070.2 42.553 94 44 3 112 205 274 357 1.23e-11 66.2
Msa1236730 AT4G22070.1 42.553 94 44 3 112 205 274 357 1.23e-11 66.2
Msa1236730 AT1G80590.1 29.333 150 84 3 139 287 86 214 2.74e-11 63.2
Msa1236730 AT5G01900.1 45.000 60 33 0 138 197 110 169 4.93e-11 62.8
Msa1236730 AT4G12020.3 49.153 59 26 2 137 195 467 521 6.38e-11 64.3
Msa1236730 AT4G12020.10 49.153 59 26 2 137 195 467 521 6.43e-11 64.3
Msa1236730 AT4G12020.6 49.153 59 26 2 137 195 467 521 6.44e-11 64.3
Msa1236730 AT4G12020.8 49.153 59 26 2 137 195 467 521 6.44e-11 64.3
Msa1236730 AT1G80840.1 38.298 94 48 3 126 216 131 217 6.52e-11 62.8
Msa1236730 AT5G15130.2 49.180 61 29 1 136 196 183 241 6.54e-11 63.9
Msa1236730 AT2G38470.1 51.724 58 24 2 138 195 184 237 6.59e-11 63.9
Msa1236730 AT4G12020.4 49.153 59 26 2 137 195 467 521 6.85e-11 64.3
Msa1236730 AT4G12020.1 49.153 59 26 2 137 195 467 521 6.87e-11 64.3
Msa1236730 AT4G12020.9 49.153 59 26 2 137 195 467 521 6.87e-11 64.3
Msa1236730 AT4G12020.7 49.153 59 26 2 137 195 467 521 6.99e-11 64.3
Msa1236730 AT4G12020.2 49.153 59 26 2 137 195 467 521 7.04e-11 64.3
Msa1236730 AT5G15130.1 49.180 61 29 1 136 196 225 283 7.14e-11 63.9
Msa1236730 AT1G68150.1 50.820 61 28 1 135 195 232 290 7.14e-11 63.2
Msa1236730 AT4G12020.5 49.153 59 26 2 137 195 400 454 7.20e-11 64.3
Msa1236730 AT1G64000.1 45.763 59 29 1 137 195 113 168 7.88e-11 61.2
Msa1236730 AT3G62340.1 46.667 60 29 1 137 196 117 173 9.55e-11 62.4

Find 72 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGAATTGGCAATAGAATT+TGG 0.147921 8_2:-15916683 None:intergenic
GTAGATCAGGATTAGTAAAA+TGG 0.232043 8_2:+15916834 Msa1236730:three_prime_UTR
CTGCTTGTCACTATTGGATA+TGG 0.238656 8_2:+15916616 Msa1236730:CDS
TGAGTCTTGGACCTCACTTT+TGG 0.250506 8_2:-15914490 None:intergenic
ATGAGTGAGGAGGAGATATA+AGG 0.253287 8_2:-15914010 None:intergenic
ATCAAAATCCATTGGGGAAT+TGG 0.278398 8_2:-15916696 None:intergenic
AAAGGGATATTTGGTAAAAT+AGG 0.282474 8_2:-15914149 None:intergenic
GCATGTGTGTCTTCCTTTGT+AGG 0.282849 8_2:-15916312 None:intergenic
CATGATTGAAAATGATTTCA+TGG 0.299823 8_2:+15916553 Msa1236730:CDS
TAGCACAAGAAAGGGATATT+TGG 0.338760 8_2:-15914158 None:intergenic
GAGCAAGTGAAGGTTTATTC+TGG 0.340277 8_2:+15914710 Msa1236730:CDS
ATGGGAGTTTCTTGTTAGAT+TGG 0.341676 8_2:-15916337 None:intergenic
ACTTCCTTCCCACGTTAGTT+AGG 0.345213 8_2:+15916920 Msa1236730:three_prime_UTR
AACATTAAGTGTGAAGAAAT+TGG 0.349506 8_2:+15914210 Msa1236730:CDS
TGAGTGAGGAGGAGATATAA+GGG 0.350623 8_2:-15914009 None:intergenic
AGTGAGACTGAGATAATTTC+AGG 0.355518 8_2:+15916659 Msa1236730:CDS
GGGAATTGGCAATAGAATTT+GGG 0.359861 8_2:-15916682 None:intergenic
TATGGACAAAAGGATATTCT+TGG 0.372931 8_2:+15914779 Msa1236730:CDS
GGTTATAGCTGGAGAAAGTA+TGG 0.376671 8_2:+15914761 Msa1236730:CDS
ATGAATTCTCATTGTTCAAA+TGG 0.381161 8_2:+15914462 Msa1236730:CDS
TGTGCTTGAACTTTGAGTCT+TGG 0.395293 8_2:-15914503 None:intergenic
GTGATGATGGAGAGAAAATT+TGG 0.413042 8_2:-15914284 None:intergenic
TATAGAGATCAAAATCCATT+GGG 0.432731 8_2:-15916703 None:intergenic
TGGGAGTTTCTTGTTAGATT+GGG 0.445225 8_2:-15916336 None:intergenic
CTGGAGAAAGTATGGACAAA+AGG 0.452781 8_2:+15914769 Msa1236730:CDS
AAATGATTTCATGGAAAATG+AGG 0.458182 8_2:+15916562 Msa1236730:CDS
GATGATGATGATGGTGATGA+TGG 0.459828 8_2:-15914297 None:intergenic
TCCCTCATTACCCTTTGCCA+TGG 0.480628 8_2:-15914412 None:intergenic
TGTGAAGAAATTGGTCTCAT+TGG 0.485916 8_2:+15914219 Msa1236730:CDS
AACCATGGCAAAGGGTAATG+AGG 0.498135 8_2:+15914410 Msa1236730:CDS
CATGGTTATTGCTGTCTCAA+TGG 0.498462 8_2:-15914394 None:intergenic
TAATTATGATAGCACAAGAA+AGG 0.499097 8_2:-15914167 None:intergenic
GAAATTATCTCAGTCTCACT+TGG 0.500825 8_2:-15916656 None:intergenic
ACAAACATGTGTCCAAGAAA+AGG 0.507877 8_2:+15914523 Msa1236730:CDS
AAAGCTAATGAAATGCCAAA+TGG 0.511471 8_2:-15914093 None:intergenic
CTGTTGAGGATGGTTATAGC+TGG 0.522098 8_2:+15914750 Msa1236730:CDS
AATTATGATAGCACAAGAAA+GGG 0.523403 8_2:-15914166 None:intergenic
TTCAGACCCTATTGATGGAG+AGG 0.523902 8_2:-15916501 None:intergenic
TTCTTGGAGCTAAGTTTCCA+AGG 0.535081 8_2:+15914795 Msa1236730:CDS
TTCTATTGCCAATTCCCCAA+TGG 0.537538 8_2:+15916688 Msa1236730:CDS
CTCTCCTAACTAACGTGGGA+AGG 0.552757 8_2:-15916924 None:intergenic
TTATAGAGATCAAAATCCAT+TGG 0.559577 8_2:-15916704 None:intergenic
TTCACTTGCTCTGTCCACTT+AGG 0.560248 8_2:-15914698 None:intergenic
TCTTTGTTCTGTTGTAACGT+AGG 0.571267 8_2:+15917026 Msa1236730:three_prime_UTR
GATATGGACAGCACTGGACT+AGG 0.571491 8_2:+15916632 Msa1236730:CDS
GTCAATTAAGACTTCATGTG+AGG 0.572810 8_2:-15914358 None:intergenic
GACAGCAATAACCATGGCAA+AGG 0.573478 8_2:+15914401 Msa1236730:CDS
ACAGCAATAACCATGGCAAA+GGG 0.573968 8_2:+15914402 Msa1236730:CDS
TATTCTGGAACAGCAGCTGA+AGG 0.574098 8_2:+15914725 Msa1236730:CDS
ACCATGGCAAAGGGTAATGA+GGG 0.583479 8_2:+15914411 Msa1236730:CDS
ACTAGCACATGAAGAACAAG+TGG 0.596225 8_2:-15914117 None:intergenic
GAGTGAGGAGGAGATATAAG+GGG 0.596537 8_2:-15914008 None:intergenic
TTGCTCTGTCCACTTAGGCA+CGG 0.602998 8_2:-15914693 None:intergenic
TTAGTAAAATGGCAAAGAGG+AGG 0.606211 8_2:+15916845 Msa1236730:three_prime_UTR
GCTGAAGGATCTGTTGAGGA+TGG 0.616817 8_2:+15914740 Msa1236730:CDS
CTATTGGATATGGACAGCAC+TGG 0.619978 8_2:+15916626 Msa1236730:CDS
AGCAGCTGAAGGATCTGTTG+AGG 0.621900 8_2:+15914736 Msa1236730:CDS
TGTTGAGGAAGTGATGAGTG+AGG 0.632535 8_2:-15914023 None:intergenic
AAAAGCTCTCCTAACTAACG+TGG 0.634073 8_2:-15916929 None:intergenic
AAATTTGAGTGGGATTGTTG+AGG 0.634323 8_2:-15914038 None:intergenic
AAATTATCTCAGTCTCACTT+GGG 0.640870 8_2:-15916655 None:intergenic
AAATGGAAGTCCCAAAAGTG+AGG 0.645726 8_2:+15914479 Msa1236730:CDS
ATATGTGAGATAACCTACAA+AGG 0.649008 8_2:+15916299 Msa1236730:CDS
TAATGACATAAATTTCGACA+TGG 0.657601 8_2:+15916724 Msa1236730:CDS
GGATTAGTAAAATGGCAAAG+AGG 0.662048 8_2:+15916842 Msa1236730:three_prime_UTR
TAAGTGGACAGAGCAAGTGA+AGG 0.673359 8_2:+15914700 Msa1236730:CDS
TGAGGAAGTGATGAGTGAGG+AGG 0.682822 8_2:-15914020 None:intergenic
AAAGCTCTCCTAACTAACGT+GGG 0.695138 8_2:-15916928 None:intergenic
CTCATTGGTGAACTAATGCA+AGG 0.698867 8_2:+15914234 Msa1236730:CDS
CATTGAGACAGCAATAACCA+TGG 0.699108 8_2:+15914395 Msa1236730:CDS
ATAGAGATCAAAATCCATTG+GGG 0.717113 8_2:-15916702 None:intergenic
TGCACACATAGACATGCACA+AGG 0.724252 8_2:+15916230 Msa1236730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGGTTTTTATTTATTATAT+AGG + chr8_2:15915147-15915166 Msa1236730:intron 10.0%
!!! AATGATATTAAAATTTTTTG+TGG - chr8_2:15916086-15916105 None:intergenic 10.0%
!!! TTTTTTTTTGAAATTTGAGT+GGG - chr8_2:15914051-15914070 None:intergenic 15.0%
!!! TTTTTTTTTTGAAATTTGAG+TGG - chr8_2:15914052-15914071 None:intergenic 15.0%
!!! TCATAATTTTCATTATTCTT+TGG + chr8_2:15914650-15914669 Msa1236730:intron 15.0%
!!! AAGTTTTATTTGTTCTATTT+AGG + chr8_2:15915128-15915147 Msa1236730:intron 15.0%
!!! ATATAGGAATTTTTTTTGAT+TGG + chr8_2:15915163-15915182 Msa1236730:intron 15.0%
!! AAAAATACTATATCAGATAA+TGG + chr8_2:15915269-15915288 Msa1236730:intron 15.0%
!! AAAATACTATATCAGATAAT+GGG + chr8_2:15915270-15915289 Msa1236730:intron 15.0%
!! AAAAATAAAAAATTGTCCTT+TGG - chr8_2:15915334-15915353 None:intergenic 15.0%
!!! ATTTTTTTTTAAGAATCCAA+AGG + chr8_2:15915348-15915367 Msa1236730:intron 15.0%
!! AAATTAGAAAGATTTAATTC+TGG + chr8_2:15915374-15915393 Msa1236730:intron 15.0%
!! TATTTAATGCTAACTTATAT+TGG - chr8_2:15915514-15915533 None:intergenic 15.0%
!! ATTGTGTGAATTTATATTAA+TGG - chr8_2:15915627-15915646 None:intergenic 15.0%
!! AATATAAATTCACACAATTA+TGG + chr8_2:15915629-15915648 Msa1236730:intron 15.0%
!!! ATTTCTTTTAATTCTCCATT+TGG + chr8_2:15914078-15914097 Msa1236730:five_prime_UTR 20.0%
!!! TTCAAGGTTCATTTTTTTAT+AGG + chr8_2:15914600-15914619 Msa1236730:intron 20.0%
!!! ATAGGAATTTTTTTTTTCCA+AGG + chr8_2:15914618-15914637 Msa1236730:intron 20.0%
!!! GTAATTTTGTCAAATTTACT+AGG - chr8_2:15914888-15914907 None:intergenic 20.0%
!!! AAGAGTTTTGTTATTCATTA+TGG + chr8_2:15914911-15914930 Msa1236730:intron 20.0%
!!! AATTTAATTACTTTTGCTTG+AGG + chr8_2:15915004-15915023 Msa1236730:intron 20.0%
!!! TTTAGACATTATTGGTTAAT+TGG - chr8_2:15915231-15915250 None:intergenic 20.0%
!! CATTGGAAAAATTTAACAAT+TGG + chr8_2:15915454-15915473 Msa1236730:intron 20.0%
!! AATCTGACAATTTAAACTAA+TGG - chr8_2:15915657-15915676 None:intergenic 20.0%
!! ATAGAAACTTTAGATTTCAA+TGG + chr8_2:15915819-15915838 Msa1236730:intron 20.0%
!!! AAAGAGAATTTTTTTTCTTG+AGG - chr8_2:15916443-15916462 None:intergenic 20.0%
!!! AGTTTCATTGTTCTTATTTT+TGG - chr8_2:15916903-15916922 None:intergenic 20.0%
!!! TATTGTATTTCACTATTTTG+AGG + chr8_2:15917001-15917020 Msa1236730:three_prime_UTR 20.0%
! AAAGGGATATTTGGTAAAAT+AGG - chr8_2:15914152-15914171 None:intergenic 25.0%
! AATTATGATAGCACAAGAAA+GGG - chr8_2:15914169-15914188 None:intergenic 25.0%
! TAATTATGATAGCACAAGAA+AGG - chr8_2:15914170-15914189 None:intergenic 25.0%
! AACATTAAGTGTGAAGAAAT+TGG + chr8_2:15914210-15914229 Msa1236730:CDS 25.0%
! ATGAATTCTCATTGTTCAAA+TGG + chr8_2:15914462-15914481 Msa1236730:CDS 25.0%
!! TAATCCAATATACCTTTTCT+TGG - chr8_2:15914538-15914557 None:intergenic 25.0%
!! TTATTGTTTCCTTTTGAACT+TGG + chr8_2:15914568-15914587 Msa1236730:intron 25.0%
!!! CATTATTCTTTGGAATTTTG+TGG + chr8_2:15914660-15914679 Msa1236730:intron 25.0%
! GTAAAAAATGATTGTTACCT+TGG - chr8_2:15914815-15914834 None:intergenic 25.0%
! AGGAATTTAAAGATGCATTA+TGG - chr8_2:15914868-15914887 None:intergenic 25.0%
! TATATATTAATCTCCTGAGT+CGG - chr8_2:15914943-15914962 None:intergenic 25.0%
! ATCAACAGAATATTCGTTAT+GGG - chr8_2:15914972-15914991 None:intergenic 25.0%
! TATCAACAGAATATTCGTTA+TGG - chr8_2:15914973-15914992 None:intergenic 25.0%
!! AAAAAAGTTATTTGCTGCAT+GGG - chr8_2:15915042-15915061 None:intergenic 25.0%
!! AAAAAAAGTTATTTGCTGCA+TGG - chr8_2:15915043-15915062 None:intergenic 25.0%
! ACCAATAATGTCTAAAAAAG+AGG + chr8_2:15915235-15915254 Msa1236730:intron 25.0%
! CCAATAATGTCTAAAAAAGA+GGG + chr8_2:15915236-15915255 Msa1236730:intron 25.0%
!! ATCTTTCTAATTTTGTCCTT+TGG - chr8_2:15915367-15915386 None:intergenic 25.0%
! TAGAAAGATTTAATTCTGGT+AGG + chr8_2:15915378-15915397 Msa1236730:intron 25.0%
!! GTACTAATGTGTTATTACTT+AGG + chr8_2:15915402-15915421 Msa1236730:intron 25.0%
! TACTACTATTCACACAATTA+TGG + chr8_2:15915599-15915618 Msa1236730:intron 25.0%
!!! TCTTCTTTTTTAAGGAAATC+AGG - chr8_2:15915764-15915783 None:intergenic 25.0%
!!! GCATATCATCTTCTTTTTTA+AGG - chr8_2:15915772-15915791 None:intergenic 25.0%
! GTGAATCACAAATTTAATTC+AGG - chr8_2:15915794-15915813 None:intergenic 25.0%
! ATTATGGAACATATCAAGTA+GGG - chr8_2:15915909-15915928 None:intergenic 25.0%
! AATTATGGAACATATCAAGT+AGG - chr8_2:15915910-15915929 None:intergenic 25.0%
!!! GATGGATTATCTTCAAATTA+TGG - chr8_2:15915925-15915944 None:intergenic 25.0%
! TAATTTGAAGATAATCCATC+TGG + chr8_2:15915925-15915944 Msa1236730:intron 25.0%
! CAAAATAACCTTAGATTCTA+TGG - chr8_2:15916128-15916147 None:intergenic 25.0%
!!! ATCTCAACTTTGTTTTTGAT+GGG - chr8_2:15916358-15916377 None:intergenic 25.0%
!!! AATCTCAACTTTGTTTTTGA+TGG - chr8_2:15916359-15916378 None:intergenic 25.0%
! TCAAAAACAAAGTTGAGATT+TGG + chr8_2:15916359-15916378 Msa1236730:CDS 25.0%
!! AAAATTCTCTTTTGACAACA+AGG + chr8_2:15916451-15916470 Msa1236730:CDS 25.0%
!! CATGAAATCATTTTCAATCA+TGG - chr8_2:15916555-15916574 None:intergenic 25.0%
! CATGATTGAAAATGATTTCA+TGG + chr8_2:15916553-15916572 Msa1236730:CDS 25.0%
! AAATGATTTCATGGAAAATG+AGG + chr8_2:15916562-15916581 Msa1236730:CDS 25.0%
! TATAGAGATCAAAATCCATT+GGG - chr8_2:15916706-15916725 None:intergenic 25.0%
! TTATAGAGATCAAAATCCAT+TGG - chr8_2:15916707-15916726 None:intergenic 25.0%
! TAATGACATAAATTTCGACA+TGG + chr8_2:15916724-15916743 Msa1236730:CDS 25.0%
AAAGCTAATGAAATGCCAAA+TGG - chr8_2:15914096-15914115 None:intergenic 30.0%
TATGGACAAAAGGATATTCT+TGG + chr8_2:15914779-15914798 Msa1236730:CDS 30.0%
! AAAAAGTTATTTGCTGCATG+GGG - chr8_2:15915041-15915060 None:intergenic 30.0%
AAGTTATAAAGTTTGTCGCT+TGG + chr8_2:15915090-15915109 Msa1236730:intron 30.0%
!!! TTTTTTTTGATTGGTGCAAG+TGG + chr8_2:15915172-15915191 Msa1236730:intron 30.0%
!!! CAATGATATTTTAGTGAGTG+GGG - chr8_2:15915207-15915226 None:intergenic 30.0%
!!! CCAATGATATTTTAGTGAGT+GGG - chr8_2:15915208-15915227 None:intergenic 30.0%
!!! CCCTCTTTTTTAGACATTAT+TGG - chr8_2:15915239-15915258 None:intergenic 30.0%
ATAATGTCTAAAAAAGAGGG+AGG + chr8_2:15915239-15915258 Msa1236730:intron 30.0%
TAATGTCTAAAAAAGAGGGA+GGG + chr8_2:15915240-15915259 Msa1236730:intron 30.0%
!! ACTATATCAGATAATGGGAA+AGG + chr8_2:15915275-15915294 Msa1236730:intron 30.0%
AGACGATAAAAGTTATCCAA+AGG + chr8_2:15915315-15915334 Msa1236730:intron 30.0%
TACTAAAAGAGAAAGGACAT+TGG + chr8_2:15915437-15915456 Msa1236730:intron 30.0%
AACTTATATTGGTGCATGAA+TGG - chr8_2:15915503-15915522 None:intergenic 30.0%
GTTGTCTATAACAGTGAATT+TGG - chr8_2:15915558-15915577 None:intergenic 30.0%
CTAACCTAAAGTCAAAATGT+AGG + chr8_2:15915712-15915731 Msa1236730:intron 30.0%
!!! ATGACCTACATTTTGACTTT+AGG - chr8_2:15915719-15915738 None:intergenic 30.0%
TCAATGGAGATTTCAAATAG+AGG + chr8_2:15915835-15915854 Msa1236730:intron 30.0%
TTGTTTGTGGTCGAATAATT+AGG + chr8_2:15915950-15915969 Msa1236730:intron 30.0%
ATATGTGAGATAACCTACAA+AGG + chr8_2:15916299-15916318 Msa1236730:CDS 30.0%
!!! TTGGGGTTGAATATTTTGAT+TGG - chr8_2:15916402-15916421 None:intergenic 30.0%
! TGGTTGTATTTTCTCTTCTT+GGG - chr8_2:15916420-15916439 None:intergenic 30.0%
!!! GAGAATTTTTTTTCTTGAGG+TGG - chr8_2:15916440-15916459 None:intergenic 30.0%
! AATTTTTCCTCTCCATCAAT+AGG + chr8_2:15916494-15916513 Msa1236730:CDS 30.0%
! ATTTTTCCTCTCCATCAATA+GGG + chr8_2:15916495-15916514 Msa1236730:CDS 30.0%
AAATTATCTCAGTCTCACTT+GGG - chr8_2:15916658-15916677 None:intergenic 30.0%
ATAGAGATCAAAATCCATTG+GGG - chr8_2:15916705-15916724 None:intergenic 30.0%
! GTAGATCAGGATTAGTAAAA+TGG + chr8_2:15916834-15916853 Msa1236730:three_prime_UTR 30.0%
AAATTTGAGTGGGATTGTTG+AGG - chr8_2:15914041-15914060 None:intergenic 35.0%
TAGCACAAGAAAGGGATATT+TGG - chr8_2:15914161-15914180 None:intergenic 35.0%
! TGTGAAGAAATTGGTCTCAT+TGG + chr8_2:15914219-15914238 Msa1236730:CDS 35.0%
!! GTGATGATGGAGAGAAAATT+TGG - chr8_2:15914287-15914306 None:intergenic 35.0%
!! GATGTTGATGATGATGATGA+TGG - chr8_2:15914309-15914328 None:intergenic 35.0%
GTCAATTAAGACTTCATGTG+AGG - chr8_2:15914361-15914380 None:intergenic 35.0%
ACAAACATGTGTCCAAGAAA+AGG + chr8_2:15914523-15914542 Msa1236730:CDS 35.0%
! GTGTCCAAGAAAAGGTATAT+TGG + chr8_2:15914531-15914550 Msa1236730:intron 35.0%
! TTGTTTCCTTTTGAACTTGG+TGG + chr8_2:15914571-15914590 Msa1236730:intron 35.0%
AATTCACCACCAAGTTCAAA+AGG - chr8_2:15914580-15914599 None:intergenic 35.0%
!!! AACTTGGTGGTGAATTTTCA+AGG + chr8_2:15914584-15914603 Msa1236730:intron 35.0%
AATTATGAGATCGTGAACCT+TGG - chr8_2:15914638-15914657 None:intergenic 35.0%
ATTATGGTATTATCCGACTC+AGG + chr8_2:15914927-15914946 Msa1236730:intron 35.0%
CCCACTCACTAAAATATCAT+TGG + chr8_2:15915205-15915224 Msa1236730:intron 35.0%
!!! GCCAATGATATTTTAGTGAG+TGG - chr8_2:15915209-15915228 None:intergenic 35.0%
! TTCTCTTTTAGTACAGTGCA+CGG - chr8_2:15915430-15915449 None:intergenic 35.0%
TGCACTGTACTAAAAGAGAA+AGG + chr8_2:15915430-15915449 Msa1236730:intron 35.0%
! AATCCATCTGGATTTGTTTG+TGG + chr8_2:15915937-15915956 Msa1236730:intron 35.0%
CTTAGATTCTATGGTCATGT+AGG - chr8_2:15916119-15916138 None:intergenic 35.0%
CTACATGACCATAGAATCTA+AGG + chr8_2:15916117-15916136 Msa1236730:intron 35.0%
! AATTGTGATTTGCAATGCAG+AGG + chr8_2:15916197-15916216 Msa1236730:intron 35.0%
TGGGAGTTTCTTGTTAGATT+GGG - chr8_2:15916339-15916358 None:intergenic 35.0%
ATGGGAGTTTCTTGTTAGAT+TGG - chr8_2:15916340-15916359 None:intergenic 35.0%
! GGTTGTATTTTCTCTTCTTG+GGG - chr8_2:15916419-15916438 None:intergenic 35.0%
! GTGGTTGTATTTTCTCTTCT+TGG - chr8_2:15916421-15916440 None:intergenic 35.0%
! ATTCTCTTTTGACAACAAGG+AGG + chr8_2:15916454-15916473 Msa1236730:CDS 35.0%
! TCATTTTCAGACCCTATTGA+TGG - chr8_2:15916509-15916528 None:intergenic 35.0%
! CATTTTCTGCTTGTCACTAT+TGG + chr8_2:15916610-15916629 Msa1236730:CDS 35.0%
GAAATTATCTCAGTCTCACT+TGG - chr8_2:15916659-15916678 None:intergenic 35.0%
AGTGAGACTGAGATAATTTC+AGG + chr8_2:15916659-15916678 Msa1236730:CDS 35.0%
GGGAATTGGCAATAGAATTT+GGG - chr8_2:15916685-15916704 None:intergenic 35.0%
ATCAAAATCCATTGGGGAAT+TGG - chr8_2:15916699-15916718 None:intergenic 35.0%
! GCACTTAGAAATTTTGTGCA+TGG + chr8_2:15916794-15916813 Msa1236730:three_prime_UTR 35.0%
!! ACTTGTGAGTTTTGTAGATC+AGG + chr8_2:15916821-15916840 Msa1236730:three_prime_UTR 35.0%
! GGATTAGTAAAATGGCAAAG+AGG + chr8_2:15916842-15916861 Msa1236730:three_prime_UTR 35.0%
TTAGTAAAATGGCAAAGAGG+AGG + chr8_2:15916845-15916864 Msa1236730:three_prime_UTR 35.0%
TCTTTGTTCTGTTGTAACGT+AGG + chr8_2:15917026-15917045 Msa1236730:three_prime_UTR 35.0%
TGAGTGAGGAGGAGATATAA+GGG - chr8_2:15914012-15914031 None:intergenic 40.0%
ATGAGTGAGGAGGAGATATA+AGG - chr8_2:15914013-15914032 None:intergenic 40.0%
ACTAGCACATGAAGAACAAG+TGG - chr8_2:15914120-15914139 None:intergenic 40.0%
CTCATTGGTGAACTAATGCA+AGG + chr8_2:15914234-15914253 Msa1236730:CDS 40.0%
!! GATGATGATGATGGTGATGA+TGG - chr8_2:15914300-15914319 None:intergenic 40.0%
CATGGTTATTGCTGTCTCAA+TGG - chr8_2:15914397-15914416 None:intergenic 40.0%
CATTGAGACAGCAATAACCA+TGG + chr8_2:15914395-15914414 Msa1236730:CDS 40.0%
ACAGCAATAACCATGGCAAA+GGG + chr8_2:15914402-15914421 Msa1236730:CDS 40.0%
AAATGGAAGTCCCAAAAGTG+AGG + chr8_2:15914479-15914498 Msa1236730:CDS 40.0%
TGTGCTTGAACTTTGAGTCT+TGG - chr8_2:15914506-15914525 None:intergenic 40.0%
GAGCAAGTGAAGGTTTATTC+TGG + chr8_2:15914710-15914729 Msa1236730:CDS 40.0%
GGTTATAGCTGGAGAAAGTA+TGG + chr8_2:15914761-15914780 Msa1236730:CDS 40.0%
! CTGGAGAAAGTATGGACAAA+AGG + chr8_2:15914769-15914788 Msa1236730:CDS 40.0%
TTCTTGGAGCTAAGTTTCCA+AGG + chr8_2:15914795-15914814 Msa1236730:CDS 40.0%
AGACTCACACACTATAAGTG+TGG + chr8_2:15915975-15915994 Msa1236730:intron 40.0%
TTCATGGACACAGAAATGCA+GGG - chr8_2:15916033-15916052 None:intergenic 40.0%
TTTCATGGACACAGAAATGC+AGG - chr8_2:15916034-15916053 None:intergenic 40.0%
!! CACTTCAGTTGGTAGTTTCA+TGG - chr8_2:15916049-15916068 None:intergenic 40.0%
AAACTACCAACTGAAGTGCA+GGG + chr8_2:15916051-15916070 Msa1236730:intron 40.0%
CTGCTTGTCACTATTGGATA+TGG + chr8_2:15916616-15916635 Msa1236730:CDS 40.0%
GGGGAATTGGCAATAGAATT+TGG - chr8_2:15916686-15916705 None:intergenic 40.0%
TTCTATTGCCAATTCCCCAA+TGG + chr8_2:15916688-15916707 Msa1236730:CDS 40.0%
AAAGCTCTCCTAACTAACGT+GGG - chr8_2:15916931-15916950 None:intergenic 40.0%
AAAAGCTCTCCTAACTAACG+TGG - chr8_2:15916932-15916951 None:intergenic 40.0%
! CGTTAGTTAGGAGAGCTTTT+CGG + chr8_2:15916932-15916951 Msa1236730:three_prime_UTR 40.0%
! GTTAGTTAGGAGAGCTTTTC+GGG + chr8_2:15916933-15916952 Msa1236730:three_prime_UTR 40.0%
! TTAGTTAGGAGAGCTTTTCG+GGG + chr8_2:15916934-15916953 Msa1236730:three_prime_UTR 40.0%
GAGTGAGGAGGAGATATAAG+GGG - chr8_2:15914011-15914030 None:intergenic 45.0%
TGTTGAGGAAGTGATGAGTG+AGG - chr8_2:15914026-15914045 None:intergenic 45.0%
GACAGCAATAACCATGGCAA+AGG + chr8_2:15914401-15914420 Msa1236730:CDS 45.0%
AACCATGGCAAAGGGTAATG+AGG + chr8_2:15914410-15914429 Msa1236730:CDS 45.0%
ACCATGGCAAAGGGTAATGA+GGG + chr8_2:15914411-15914430 Msa1236730:CDS 45.0%
!! GAGTCTTGGACCTCACTTTT+GGG - chr8_2:15914492-15914511 None:intergenic 45.0%
! TGAGTCTTGGACCTCACTTT+TGG - chr8_2:15914493-15914512 None:intergenic 45.0%
TTCACTTGCTCTGTCCACTT+AGG - chr8_2:15914701-15914720 None:intergenic 45.0%
TAAGTGGACAGAGCAAGTGA+AGG + chr8_2:15914700-15914719 Msa1236730:CDS 45.0%
!! TATTCTGGAACAGCAGCTGA+AGG + chr8_2:15914725-15914744 Msa1236730:CDS 45.0%
CTGTTGAGGATGGTTATAGC+TGG + chr8_2:15914750-15914769 Msa1236730:CDS 45.0%
TTGATTGGTGCAAGTGGCTT+TGG + chr8_2:15915178-15915197 Msa1236730:intron 45.0%
TGATTGGTGCAAGTGGCTTT+GGG + chr8_2:15915179-15915198 Msa1236730:intron 45.0%
CGACCACAAACAAATCCAGA+TGG - chr8_2:15915943-15915962 None:intergenic 45.0%
GTGTGGAGAAGTGAGAAATC+CGG + chr8_2:15915992-15916011 Msa1236730:intron 45.0%
TGTGGAGAAGTGAGAAATCC+GGG + chr8_2:15915993-15916012 Msa1236730:intron 45.0%
TCATGGACACAGAAATGCAG+GGG - chr8_2:15916032-15916051 None:intergenic 45.0%
GAAACTACCAACTGAAGTGC+AGG + chr8_2:15916050-15916069 Msa1236730:intron 45.0%
TGCACACATAGACATGCACA+AGG + chr8_2:15916230-15916249 Msa1236730:CDS 45.0%
GCATGTGTGTCTTCCTTTGT+AGG - chr8_2:15916315-15916334 None:intergenic 45.0%
TTCAGACCCTATTGATGGAG+AGG - chr8_2:15916504-15916523 None:intergenic 45.0%
CTATTGGATATGGACAGCAC+TGG + chr8_2:15916626-15916645 Msa1236730:CDS 45.0%
ACTTCCTTCCCACGTTAGTT+AGG + chr8_2:15916920-15916939 Msa1236730:three_prime_UTR 45.0%
TGAGGAAGTGATGAGTGAGG+AGG - chr8_2:15914023-15914042 None:intergenic 50.0%
TCCCTCATTACCCTTTGCCA+TGG - chr8_2:15914415-15914434 None:intergenic 50.0%
GCAGAAAAACCGTGCCTAAG+TGG + chr8_2:15914684-15914703 Msa1236730:intron 50.0%
TTGCTCTGTCCACTTAGGCA+CGG - chr8_2:15914696-15914715 None:intergenic 50.0%
AGCAGCTGAAGGATCTGTTG+AGG + chr8_2:15914736-15914755 Msa1236730:CDS 50.0%
GCTGAAGGATCTGTTGAGGA+TGG + chr8_2:15914740-15914759 Msa1236730:CDS 50.0%
GTGGAGAAGTGAGAAATCCG+GGG + chr8_2:15915994-15916013 Msa1236730:intron 50.0%
TGATAGCCCTGCACTTCAGT+TGG - chr8_2:15916060-15916079 None:intergenic 50.0%
! GATATGGACAGCACTGGACT+AGG + chr8_2:15916632-15916651 Msa1236730:CDS 50.0%
CTCTCCTAACTAACGTGGGA+AGG - chr8_2:15916927-15916946 None:intergenic 50.0%
!! GAGAGCTTTTCGGGGTAGTT+AGG + chr8_2:15916942-15916961 Msa1236730:three_prime_UTR 50.0%
AGGGGTCGGAATTCAAACCC+CGG - chr8_2:15916014-15916033 None:intergenic 55.0%
GGACACAGAAATGCAGGGGT+CGG - chr8_2:15916028-15916047 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 15913991 15917051 15913991 ID=Msa1236730;Name=Msa1236730
chr8_2 mRNA 15913991 15917051 15913991 ID=Msa1236730-mRNA-1;Parent=Msa1236730;Name=Msa1236730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=210|1|1|1|1|1|3|267|346
chr8_2 exon 15913991 15914544 15913991 ID=Msa1236730-mRNA-1:exon:5944;Parent=Msa1236730-mRNA-1
chr8_2 exon 15914688 15914816 15914688 ID=Msa1236730-mRNA-1:exon:5945;Parent=Msa1236730-mRNA-1
chr8_2 exon 15916217 15917051 15916217 ID=Msa1236730-mRNA-1:exon:5946;Parent=Msa1236730-mRNA-1
chr8_2 five_prime_UTR 15913991 15914200 15913991 ID=Msa1236730-mRNA-1:five_prime_utr;Parent=Msa1236730-mRNA-1
chr8_2 CDS 15914201 15914544 15914201 ID=Msa1236730-mRNA-1:cds;Parent=Msa1236730-mRNA-1
chr8_2 CDS 15914688 15914816 15914688 ID=Msa1236730-mRNA-1:cds;Parent=Msa1236730-mRNA-1
chr8_2 CDS 15916217 15916784 15916217 ID=Msa1236730-mRNA-1:cds;Parent=Msa1236730-mRNA-1
chr8_2 three_prime_UTR 15916785 15917051 15916785 ID=Msa1236730-mRNA-1:three_prime_utr;Parent=Msa1236730-mRNA-1
Gene Sequence

>Msa1236730

ATGAAAGAGAACATTAAGTGTGAAGAAATTGGTCTCATTGGTGAACTAATGCAAGGTGAAGAGCTAGCAAAGAAGCTTTATGACCAAATTTTCTCTCCATCATCACCATCATCATCATCATCAACATCATCATCATCATCAACATCAACATCAACTTCCTCACATGAAGTCTTAATTGACAAATTAATTTTGTCCATTGAGACAGCAATAACCATGGCAAAGGGTAATGAGGGAAAAATTAAGACAAACAATGTCAACATGATGAATTCTCATTGTTCAAATGGAAGTCCCAAAAGTGAGGTCCAAGACTCAAAGTTCAAGCACAAACATGTGTCCAAGAAAAGAAAAACCGTGCCTAAGTGGACAGAGCAAGTGAAGGTTTATTCTGGAACAGCAGCTGAAGGATCTGTTGAGGATGGTTATAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGACATGCACAAGGTTGTCTAGCTACTAAGCAAGTGCAAAAATCAGATGAAGATGAAATGATATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAATCTAACAAGAAACTCCCATCAAAAACAAAGTTGAGATTTGGACAAAATAAATCACAATCCAATCAAAATATTCAACCCCAAGAAGAGAAAATACAACCACCTCAAGAAAAAAAATTCTCTTTTGACAACAAGGAGGATATATTTCAATCATTCAATTTTTCCTCTCCATCAATAGGGTCTGAAAATGAAGATAACAACATATTTTTAGAGACCATGATTGAAAATGATTTCATGGAAAATGAGGATAACAATATATTCTCAGAATCAAACATTTTCTGCTTGTCACTATTGGATATGGACAGCACTGGACTAGGCCCAAGTGAGACTGAGATAATTTCAGGCCCAAATTCTATTGCCAATTCCCCAATGGATTTTGATCTCTATAATGACATAAATTTCGACATGGATGATTTCTCTATCAACACACAAGAACTTTGCTATTGA
Protein sequence

>Msa1236730

MKENIKCEEIGLIGELMQGEELAKKLYDQIFSPSSPSSSSSTSSSSSTSTSTSSHEVLIDKLILSIETAITMAKGNEGKIKTNNVNMMNSHCSNGSPKSEVQDSKFKHKHVSKKRKTVPKWTEQVKVYSGTAAEGSVEDGYSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEDEMICEITYKGRHTCTQSNKKLPSKTKLRFGQNKSQSNQNIQPQEEKIQPPQEKKFSFDNKEDIFQSFNFSSPSIGSENEDNNIFLETMIENDFMENEDNNIFSESNIFCLSLLDMDSTGLGPSETEIISGPNSIANSPMDFDLYNDINFDMDDFSINTQELCY*