AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220170 MtrunA17_Chr2g0323611 93.151 73 4 1 39 111 5 76 9.81e-41 135
Msa0220170 MtrunA17_Chr2g0323611 43.119 109 27 3 165 272 10 84 2.08e-17 75.1
Msa0220170 MtrunA17_Chr2g0323661 91.781 73 5 1 39 111 5 76 1.31e-40 135
Msa0220170 MtrunA17_Chr2g0323661 43.519 108 28 2 165 272 10 84 1.07e-18 78.6
Msa0220170 MtrunA17_Chr2g0323601 62.162 111 15 2 164 272 7 92 4.54e-34 119
Msa0220170 MtrunA17_Chr2g0323601 51.282 78 29 1 44 112 8 85 1.11e-17 76.3
Msa0220170 MtrunA17_Chr2g0323651 59.292 113 14 2 164 272 7 91 6.67e-31 110
Msa0220170 MtrunA17_Chr2g0323651 54.545 77 27 1 44 112 8 84 1.01e-16 73.6
Msa0220170 MtrunA17_Chr2g0323711 59.292 113 14 2 164 272 7 91 6.67e-31 110
Msa0220170 MtrunA17_Chr2g0323711 54.545 77 27 1 44 112 8 84 1.01e-16 73.6
Msa0220170 MtrunA17_Chr2g0323631 52.893 121 8 2 44 163 11 83 1.01e-30 110
Msa0220170 MtrunA17_Chr2g0323631 44.545 110 32 2 164 272 10 91 3.15e-21 85.5
Msa0220170 MtrunA17_Chr2g0323571 52.893 121 8 2 44 163 11 83 6.64e-30 108
Msa0220170 MtrunA17_Chr2g0323571 47.273 110 29 2 164 272 10 91 3.32e-22 88.2
Msa0220170 MtrunA17_Chr2g0323671 52.066 121 9 2 44 163 11 83 1.89e-29 107
Msa0220170 MtrunA17_Chr2g0323671 47.273 110 29 2 164 272 10 91 4.32e-22 87.8
Msa0220170 MtrunA17_Chr2g0323681 55.963 109 29 1 164 272 7 96 6.70e-28 103
Msa0220170 MtrunA17_Chr2g0323681 48.780 82 29 1 44 112 8 89 6.24e-15 68.9
Msa0220170 MtrunA17_Chr4g0022611 51.818 110 25 2 164 272 7 89 3.55e-25 95.9
Msa0220170 MtrunA17_Chr4g0022611 61.333 75 23 2 44 112 8 82 2.29e-20 83.2
Msa0220170 MtrunA17_Chr2g0323701 61.333 75 23 1 44 112 8 82 1.37e-24 94.4
Msa0220170 MtrunA17_Chr2g0323701 47.273 110 28 2 165 272 8 89 5.38e-24 92.8
Msa0220170 MtrunA17_Chr2g0323721 57.333 75 26 1 44 112 8 82 2.14e-22 88.6
Msa0220170 MtrunA17_Chr2g0323721 46.364 110 29 2 165 272 8 89 2.23e-22 88.6
Msa0220170 MtrunA17_Chr2g0323551 45.946 111 31 4 164 273 7 89 2.44e-18 77.8
Msa0220170 MtrunA17_Chr2g0323551 54.167 72 28 2 46 112 10 81 1.30e-15 70.5
Msa0220170 MtrunA17_Chr2g0318611 61.644 73 22 3 164 234 7 75 6.49e-17 73.9
Msa0220170 MtrunA17_Chr2g0318611 54.286 70 30 2 44 111 8 77 1.15e-14 68.2
Msa0220170 MtrunA17_Chr2g0318601 40.541 111 34 2 164 273 7 86 4.83e-16 71.6
Msa0220170 MtrunA17_Chr2g0318601 51.429 70 32 2 44 111 8 77 3.58e-14 66.6
Msa0220170 MtrunA17_Chr2g0318641 47.368 76 30 5 164 236 40 108 2.82e-11 59.7
Msa0220170 MtrunA17_Chr2g0318591 51.429 70 32 2 44 111 8 77 4.42e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220170 AT4G10265.1 61.429 70 25 2 44 112 8 76 2.44e-20 83.2
Msa0220170 AT4G10265.1 39.815 108 31 2 165 271 8 82 3.99e-19 80.1
Msa0220170 AT4G10270.1 43.636 110 35 2 164 272 7 90 7.09e-19 79.7
Msa0220170 AT4G10270.1 47.368 76 33 2 44 112 8 83 1.58e-15 70.9

Find 50 sgRNAs with CRISPR-Local

Find 662 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTGCTACCAAATTTA+AGG 0.083204 2_1:+68365294 Msa0220170:CDS
CTTCTTGTCATCCTTAAATT+TGG 0.215497 2_1:-68365305 None:intergenic
CAATTTCTCATCCCTCAATT+TGG 0.225445 2_1:-68361707 None:intergenic
TCATCACTCATGAGTTCTTT+TGG 0.230370 2_1:-68358380 None:intergenic
TCATCACTCATGAGTTCTTT+TGG 0.230370 2_1:-68368749 None:intergenic
CATCATGTTCTTGAGCATAT+TGG 0.265049 2_1:+68368805 Msa0220170:CDS
CAAAGACTCCTCTGCCTGTT+TGG 0.289223 2_1:-68365329 None:intergenic
ATCATGTTCTTGAGCATATT+GGG 0.310940 2_1:+68368806 Msa0220170:CDS
AGCAATCAGAGGAATCTTTA+AGG 0.315897 2_1:+68368569 Msa0220170:CDS
TTCATCTTCTTCTTCTCCTA+TGG 0.383759 2_1:+68368519 Msa0220170:CDS
TTTGGAATTGTTGAAGAAGT+AGG 0.403030 2_1:-68358362 None:intergenic
TTTGGAATTGTTGAAGAAGT+AGG 0.403030 2_1:-68368731 None:intergenic
TGGAGTGGTGGAGGCTTTGA+AGG 0.421743 2_1:+68361579 Msa0220170:CDS
TTCTAATTCTAGACAACAAA+AGG 0.422761 2_1:+68368543 Msa0220170:CDS
TTTCTTCTTCAACCAAATTG+AGG 0.427146 2_1:+68361695 Msa0220170:CDS
CAAGAAGCCGAGCATGGAAA+TGG 0.438064 2_1:+68361539 Msa0220170:intron
GGATGACAAGAAGGCCAAAC+AGG 0.439731 2_1:+68365315 Msa0220170:CDS
TTCTTCTTCAACCAAATTGA+GGG 0.442795 2_1:+68361696 Msa0220170:CDS
CCACACTCCATTTCCATGCT+CGG 0.447669 2_1:-68361546 None:intergenic
AACAGGCAGAGGAGTCTTTG+AGG 0.481417 2_1:+68365332 Msa0220170:CDS
AGCAGAGCATGGGTAGCTGC+AGG 0.497606 2_1:+68368376 Msa0220170:intron
CAAGAAGGCCAAACAGGCAG+AGG 0.502891 2_1:+68365321 Msa0220170:CDS
GTGGAAGCATTGAAAGATCA+AGG 0.506795 2_1:+68368412 Msa0220170:CDS
TTTGAACTGACTTTAGGGTA+TGG 0.511934 2_1:-68368450 None:intergenic
CAAATTTAAGGATGACAAGA+AGG 0.525172 2_1:+68365306 Msa0220170:CDS
TCATGAGTGATGAGAAGAAG+AGG 0.538035 2_1:+68358390 Msa0220170:CDS
GTGGAGGCTTTGAAGGATCA+AGG 0.541801 2_1:+68361586 Msa0220170:CDS
CTTGAGACATTGATCTAACA+CGG 0.543910 2_1:-68365249 None:intergenic
AACAAGTGTTGGAGTGGTGG+AGG 0.544249 2_1:+68361570 Msa0220170:CDS
GAGTTCAACAAGCAGAGCAT+GGG 0.554434 2_1:+68368366 Msa0220170:intron
TGGAGTGTGGCAACAAGTGT+TGG 0.555767 2_1:+68361559 Msa0220170:CDS
TGCAGGCAGTGTTGCAGTTG+TGG 0.558647 2_1:+68368393 Msa0220170:CDS
TAGCTTCTGTGCATGAGCTA+AGG 0.562919 2_1:-68358336 None:intergenic
GGCAACAAGTGTTGGAGTGG+TGG 0.567978 2_1:+68361567 Msa0220170:CDS
TCATGAGTGATGAGGAGAAG+AGG 0.572849 2_1:+68368759 Msa0220170:CDS
TGAGTTCAAGAAGCCGAGCA+TGG 0.587196 2_1:+68361533 Msa0220170:intron
AAGAACATGATGGTTCTCAA+TGG 0.587690 2_1:-68358425 None:intergenic
TGAGGAGAAGAGGAAAGCAG+AGG 0.595179 2_1:+68368769 Msa0220170:CDS
GGATGAGAAATTGAAGCAGT+CGG 0.598265 2_1:+68361717 Msa0220170:CDS
TGTCTAGAATTAGAAACCAT+AGG 0.610973 2_1:-68368535 None:intergenic
AAGATCAAGGAATATGCAGA+TGG 0.613727 2_1:+68368425 Msa0220170:CDS
CAATATGCTCAAGAACATGA+TGG 0.616449 2_1:-68368804 None:intergenic
AGGATCAAGGAATATGCAGA+TGG 0.620547 2_1:+68361599 Msa0220170:CDS
AAAAGAACTCATGAGTGATG+AGG 0.622390 2_1:+68368751 Msa0220170:CDS
GGAAAGCAGAGGAATCATTG+AGG 0.640093 2_1:+68368780 Msa0220170:CDS
ACAAAAGGCAAAGCAATCAG+AGG 0.651467 2_1:+68368558 Msa0220170:CDS
TGTGGCAACAAGTGTTGGAG+TGG 0.655283 2_1:+68361564 Msa0220170:CDS
CCGAGCATGGAAATGGAGTG+TGG 0.657391 2_1:+68361546 Msa0220170:CDS
TGAGAAATTGAAGCAGTCGG+AGG 0.666305 2_1:+68361720 Msa0220170:CDS
TGAGAAGAAGAGGAAAGCAG+AGG 0.676830 2_1:+68358400 Msa0220170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTAATAAAAAAT+AGG - chr2_1:68359068-68359087 None:intergenic 0.0%
!!! TAAAAACTTTTTTAAGTTAT+TGG + chr2_1:68358844-68358863 Msa0220170:intron 10.0%
!! ATATAATTAATTAAACATGT+AGG - chr2_1:68359387-68359406 None:intergenic 10.0%
!! AAAATATAATATTTCCATTA+TGG - chr2_1:68360552-68360571 None:intergenic 10.0%
!!! ATAGGATTTTTTTTTTTTTT+TGG + chr2_1:68361994-68362013 Msa0220170:intron 10.0%
!!! TAGGATTTTTTTTTTTTTTT+GGG + chr2_1:68361995-68362014 Msa0220170:intron 10.0%
!!! TCTAAATAAAGATTTTATTT+GGG + chr2_1:68362348-68362367 Msa0220170:intron 10.0%
!! AAAAAAAAATCATTACTATA+CGG - chr2_1:68362668-68362687 None:intergenic 10.0%
!!! TTTTAAATTCATTTAATGAA+TGG + chr2_1:68362769-68362788 Msa0220170:intron 10.0%
!! TTTAAATTCATTTAATGAAT+GGG + chr2_1:68362770-68362789 Msa0220170:intron 10.0%
!!! TTATTTTGAGAATTTTTTTT+TGG - chr2_1:68362844-68362863 None:intergenic 10.0%
!!! AATAATTAAGAGTATAATAA+TGG - chr2_1:68362914-68362933 None:intergenic 10.0%
!! CCAAAAAAATAATTATATTA+TGG - chr2_1:68364648-68364667 None:intergenic 10.0%
!!! CCATAATATAATTATTTTTT+TGG + chr2_1:68364645-68364664 Msa0220170:intron 10.0%
!!! AATGTGAAAATAAATTTTTT+AGG + chr2_1:68364789-68364808 Msa0220170:intron 10.0%
!! TTTATGGATAAAAAAATTTA+CGG - chr2_1:68365538-68365557 None:intergenic 10.0%
!!! TTTTTAAGTTATTGGATTTA+TGG + chr2_1:68358852-68358871 Msa0220170:intron 15.0%
!!! AATTTTACACAATTAGTAAA+TGG + chr2_1:68359518-68359537 Msa0220170:intron 15.0%
!!! AAAATTTTGTTTTTTCAGAT+TGG + chr2_1:68359890-68359909 Msa0220170:intron 15.0%
!! AATATCATAACTTATTGTAA+TGG + chr2_1:68359948-68359967 Msa0220170:intron 15.0%
!! ATATCATAACTTATTGTAAT+GGG + chr2_1:68359949-68359968 Msa0220170:intron 15.0%
!!! ATTTTAATATATTTCCAGTA+AGG - chr2_1:68360763-68360782 None:intergenic 15.0%
!! AAATGTTAATTTCTTTAGTT+GGG - chr2_1:68361784-68361803 None:intergenic 15.0%
!! ATAGAAATTTGTGTATATAT+AGG + chr2_1:68361976-68361995 Msa0220170:intron 15.0%
!!! GTCTAAATAAAGATTTTATT+TGG + chr2_1:68362347-68362366 Msa0220170:intron 15.0%
!!! TTTATATGTTATTAGCATTT+TGG + chr2_1:68362383-68362402 Msa0220170:intron 15.0%
!! AAAAAAAATCATTACTATAC+GGG - chr2_1:68362667-68362686 None:intergenic 15.0%
!! TTAAATTCATTTAATGAATG+GGG + chr2_1:68362771-68362790 Msa0220170:intron 15.0%
!!! CTTAAGATTTTTTTATGATA+TGG + chr2_1:68364344-68364363 Msa0220170:intron 15.0%
!!! ATTTTGATGTTTCTAAAAAA+TGG + chr2_1:68364541-68364560 Msa0220170:intron 15.0%
!! ACTTTATATCATTAAATTCA+GGG - chr2_1:68364613-68364632 None:intergenic 15.0%
!! AACTTTATATCATTAAATTC+AGG - chr2_1:68364614-68364633 None:intergenic 15.0%
!!! GTTTTCAAGATATTATATTT+TGG - chr2_1:68364677-68364696 None:intergenic 15.0%
!!! TATGTTTTATAGTTGATTTT+TGG - chr2_1:68365091-68365110 None:intergenic 15.0%
!! AAAATTTATCACACAAATTA+TGG - chr2_1:68365712-68365731 None:intergenic 15.0%
!!! TGTTGTTATTCTATTTAATT+AGG + chr2_1:68366981-68367000 Msa0220170:intron 15.0%
!! GCAAAAAGAAAATAAAAATT+AGG + chr2_1:68367325-68367344 Msa0220170:intron 15.0%
!!! CAAGTTATTATAATTTGTTT+AGG - chr2_1:68367773-68367792 None:intergenic 15.0%
!! ACAAGTTAAAATAGTTAAAA+AGG + chr2_1:68367872-68367891 Msa0220170:intron 15.0%
!! TAATAAGATTAGATGAATAT+TGG + chr2_1:68368014-68368033 Msa0220170:intron 15.0%
!! CAAATTCTTAGAACAAAAAA+CGG + chr2_1:68358462-68358481 Msa0220170:intron 20.0%
!! GATAGCAAATTTACATATAA+TGG - chr2_1:68358593-68358612 None:intergenic 20.0%
!!! TTTTCATCAATAAATTAAGC+TGG - chr2_1:68358628-68358647 None:intergenic 20.0%
!!! TTGATTGTTGATAGAAAATT+GGG - chr2_1:68358905-68358924 None:intergenic 20.0%
!!! TTTGATTGTTGATAGAAAAT+TGG - chr2_1:68358906-68358925 None:intergenic 20.0%
!!! ATTTAAAACGATGCTAAATA+GGG - chr2_1:68359276-68359295 None:intergenic 20.0%
!!! TATTTAAAACGATGCTAAAT+AGG - chr2_1:68359277-68359296 None:intergenic 20.0%
!! TAATTGTGTAAAATTTCCAA+CGG - chr2_1:68359513-68359532 None:intergenic 20.0%
!!! ATTCTGTTTTAGAAGAAATT+TGG + chr2_1:68359548-68359567 Msa0220170:intron 20.0%
!! ATTAAAAAACGACTTGAAAA+TGG + chr2_1:68359594-68359613 Msa0220170:intron 20.0%
!!! AGATGCAAATATTTTAAAGA+TGG + chr2_1:68359810-68359829 Msa0220170:intron 20.0%
!! CAATATTAAATCGAATACAA+GGG - chr2_1:68359985-68360004 None:intergenic 20.0%
!!! GTATTTAGGATAATACTTTA+TGG + chr2_1:68360049-68360068 Msa0220170:intron 20.0%
!! TAATATTTCCATTATGGAAT+TGG - chr2_1:68360546-68360565 None:intergenic 20.0%
!! TAATAAGGTGAGAATTTAAT+TGG - chr2_1:68360954-68360973 None:intergenic 20.0%
!! AATATAAAGTGTGGATAATA+AGG - chr2_1:68360969-68360988 None:intergenic 20.0%
!!! AAAGTGACAATAATTAGTTT+GGG - chr2_1:68361376-68361395 None:intergenic 20.0%
!! AAAAGTGACAATAATTAGTT+TGG - chr2_1:68361377-68361396 None:intergenic 20.0%
!! AGTGTTAATATATAGTGTTT+GGG - chr2_1:68361405-68361424 None:intergenic 20.0%
!! TAGTGTTAATATATAGTGTT+TGG - chr2_1:68361406-68361425 None:intergenic 20.0%
!!! ATATTGATTAATTGTTGATG+AGG - chr2_1:68361460-68361479 None:intergenic 20.0%
!! AATGTTAATTTCTTTAGTTG+GGG - chr2_1:68361783-68361802 None:intergenic 20.0%
!! GAAATGTTAATTTCTTTAGT+TGG - chr2_1:68361785-68361804 None:intergenic 20.0%
!! ATTATTTGATTATTTCAGCA+GGG - chr2_1:68362531-68362550 None:intergenic 20.0%
!! TATTATTTGATTATTTCAGC+AGG - chr2_1:68362532-68362551 None:intergenic 20.0%
!! TTCACTAACTACAATTAATA+AGG + chr2_1:68362956-68362975 Msa0220170:intron 20.0%
!! TCACTAACTACAATTAATAA+GGG + chr2_1:68362957-68362976 Msa0220170:intron 20.0%
!!! ATTTATTGTGTTGATTTTGA+TGG - chr2_1:68363010-68363029 None:intergenic 20.0%
!! AAACGACTATTATTTAGATA+CGG + chr2_1:68363059-68363078 Msa0220170:intron 20.0%
!!! TATTCATTGATAGTTATTGA+TGG + chr2_1:68363218-68363237 Msa0220170:intron 20.0%
!!! ATTCATTGATAGTTATTGAT+GGG + chr2_1:68363219-68363238 Msa0220170:intron 20.0%
!! TTATGTTCAACTTCAATAAT+CGG + chr2_1:68363804-68363823 Msa0220170:intron 20.0%
!! TCTATAACATCTATCAATAA+CGG - chr2_1:68364239-68364258 None:intergenic 20.0%
!! TTGATAGATGTTATAGAATT+TGG + chr2_1:68364242-68364261 Msa0220170:intron 20.0%
!! TGATAGATGTTATAGAATTT+GGG + chr2_1:68364243-68364262 Msa0220170:intron 20.0%
!! CTTTATATCATTAAATTCAG+GGG - chr2_1:68364612-68364631 None:intergenic 20.0%
!! TAAAACAAAATAATCTAGCT+TGG - chr2_1:68364877-68364896 None:intergenic 20.0%
!!! AATGTTCGATCTTATTTATA+TGG - chr2_1:68364991-68365010 None:intergenic 20.0%
!! TATGTACAAATGAATCAATT+GGG - chr2_1:68365385-68365404 None:intergenic 20.0%
!! GTAAAGTTTGTAATATCAAA+CGG + chr2_1:68365429-68365448 Msa0220170:intron 20.0%
!! TTCAAAATTTGAGGAAAATT+TGG - chr2_1:68365753-68365772 None:intergenic 20.0%
!! TCAATCAAATTCAAAATTTG+AGG - chr2_1:68365762-68365781 None:intergenic 20.0%
!!! TGTTTGTTTCTTTCTTAAAA+AGG + chr2_1:68366022-68366041 Msa0220170:intron 20.0%
!!! TAAATTTGATAATGTGAAGT+TGG + chr2_1:68366253-68366272 Msa0220170:intron 20.0%
!! AAACCTTCATATATAACATA+TGG - chr2_1:68366406-68366425 None:intergenic 20.0%
!!! TATTTAATTAGGTGATTTGT+TGG + chr2_1:68366992-68367011 Msa0220170:intron 20.0%
!!! TCTTAGCATTTTAAGAAAAA+AGG - chr2_1:68367206-68367225 None:intergenic 20.0%
!!! GGCTTTTAAAAAAAAATCAT+TGG + chr2_1:68368035-68368054 Msa0220170:intron 20.0%
!!! CGTTTTTTGTTCTAAGAATT+TGG - chr2_1:68358464-68358483 None:intergenic 25.0%
! TTCTCACTCAAATTCAAAAT+TGG - chr2_1:68358688-68358707 None:intergenic 25.0%
! TGTTCAAATCCTTGTAAAAT+GGG + chr2_1:68359020-68359039 Msa0220170:intron 25.0%
! TTATACCGAAATGGAAATAA+TGG + chr2_1:68359182-68359201 Msa0220170:intron 25.0%
! TATTCATTGATGTCATAATG+AGG - chr2_1:68359305-68359324 None:intergenic 25.0%
! CATTATGACATCAATGAATA+TGG + chr2_1:68359305-68359324 Msa0220170:intron 25.0%
!!! TTCTGTTTTAGAAGAATTCT+TGG + chr2_1:68359625-68359644 Msa0220170:intron 25.0%
! TCATGGTTTATAAGTGAAAA+AGG + chr2_1:68359859-68359878 Msa0220170:intron 25.0%
! CATGGTTTATAAGTGAAAAA+GGG + chr2_1:68359860-68359879 Msa0220170:intron 25.0%
! ATGGTTTATAAGTGAAAAAG+GGG + chr2_1:68359861-68359880 Msa0220170:intron 25.0%
!!! ATTTTGTTTTTTCAGATTGG+TGG + chr2_1:68359893-68359912 Msa0220170:intron 25.0%
! GCAATATTAAATCGAATACA+AGG - chr2_1:68359986-68360005 None:intergenic 25.0%
! AATAAGTAAATCCTAGTCAA+TGG + chr2_1:68360734-68360753 Msa0220170:intron 25.0%
!!! AACTTATTCCGTTTTTTCTT+TGG + chr2_1:68360808-68360827 Msa0220170:intron 25.0%
! AAGTTCTTCCAAAGAAAAAA+CGG - chr2_1:68360819-68360838 None:intergenic 25.0%
! TTATACGATGCTTATACAAA+CGG - chr2_1:68360845-68360864 None:intergenic 25.0%
! TTACAAATTAAGTCCAAATG+CGG + chr2_1:68361207-68361226 Msa0220170:intron 25.0%
! TTAGGTGAATTGAATAGATA+CGG - chr2_1:68361265-68361284 None:intergenic 25.0%
! AAATAAAAAAATGGGGAACA+TGG - chr2_1:68361315-68361334 None:intergenic 25.0%
!!! TGAAGAAGAAATTTTGTTGT+TGG - chr2_1:68361686-68361705 None:intergenic 25.0%
! GGTCAAGTGTATATATATAT+AGG + chr2_1:68362016-68362035 Msa0220170:intron 25.0%
! TGATATGATATGATGAATGA+TGG + chr2_1:68362052-68362071 Msa0220170:intron 25.0%
! GATATGATATGATGAATGAT+GGG + chr2_1:68362053-68362072 Msa0220170:intron 25.0%
!!! TGATGGGTTTTTTTTATTTG+TGG + chr2_1:68362069-68362088 Msa0220170:intron 25.0%
!!! TAATAGCTTTGAACATAAAG+TGG + chr2_1:68362265-68362284 Msa0220170:intron 25.0%
! AGCATAAACTCATCTAAATA+AGG + chr2_1:68362313-68362332 Msa0220170:intron 25.0%
! ATTAATTGTAGTTAGTGAAG+TGG - chr2_1:68362955-68362974 None:intergenic 25.0%
! ATGATATGAAAGTTTCAGAT+TGG + chr2_1:68363171-68363190 Msa0220170:intron 25.0%
! TGATATGAAAGTTTCAGATT+GGG + chr2_1:68363172-68363191 Msa0220170:intron 25.0%
! AACTATCAATGAATATTCCA+AGG - chr2_1:68363213-68363232 None:intergenic 25.0%
! AAACCATTAGATGTACTTAA+TGG + chr2_1:68363594-68363613 Msa0220170:intron 25.0%
! AAACCATTAAGTACATCTAA+TGG - chr2_1:68363600-68363619 None:intergenic 25.0%
!! TTAAGTACATCTAATGGTTT+TGG - chr2_1:68363594-68363613 None:intergenic 25.0%
! AAACCATTAGATGTACTTAA+TGG + chr2_1:68363594-68363613 Msa0220170:intron 25.0%
! AAACCATTAAGTACATCTAA+TGG - chr2_1:68363600-68363619 None:intergenic 25.0%
! CTATAACATCTATCAATAAC+GGG - chr2_1:68364238-68364257 None:intergenic 25.0%
! GATAGATGTTATAGAATTTG+GGG + chr2_1:68364244-68364263 Msa0220170:intron 25.0%
! ATAGATGTTATAGAATTTGG+GGG + chr2_1:68364245-68364264 Msa0220170:intron 25.0%
! TTGTGGCTTATAATTTAATC+AGG + chr2_1:68364315-68364334 Msa0220170:intron 25.0%
! TGTGGCTTATAATTTAATCA+GGG + chr2_1:68364316-68364335 Msa0220170:intron 25.0%
!!! TTTCTAAAAAATGGTGTCAT+GGG + chr2_1:68364550-68364569 Msa0220170:intron 25.0%
! CTAATCAAACACGATTAAAT+TGG - chr2_1:68364724-68364743 None:intergenic 25.0%
! ATTTAATCGTGTTTGATTAG+AGG + chr2_1:68364724-68364743 Msa0220170:intron 25.0%
!!! TAAATTTTTTAGGCACGTTT+AGG + chr2_1:68364799-68364818 Msa0220170:intron 25.0%
!!! TTTTAATTAATTCCCGAAAC+CGG + chr2_1:68364892-68364911 Msa0220170:intron 25.0%
!! AAAATGAGATTGTTGATTGA+TGG - chr2_1:68365027-68365046 None:intergenic 25.0%
!! ATTTGTTGCTACCAAATTTA+AGG + chr2_1:68365294-68365313 Msa0220170:CDS 25.0%
! CTATGTACAAATGAATCAAT+TGG - chr2_1:68365386-68365405 None:intergenic 25.0%
!! CAAGTTGTGATAAGTTTTTA+TGG - chr2_1:68365554-68365573 None:intergenic 25.0%
! ATGATATAGTTGTTGATCAA+CGG + chr2_1:68365874-68365893 Msa0220170:intron 25.0%
!! ATACATTGGTTACTGAATTA+AGG + chr2_1:68365922-68365941 Msa0220170:intron 25.0%
!! TACATTGGTTACTGAATTAA+GGG + chr2_1:68365923-68365942 Msa0220170:intron 25.0%
! TAAAAAGGTGAATGAATTGA+AGG + chr2_1:68366037-68366056 Msa0220170:intron 25.0%
!! TAGAGTTAATTTGGTATCAT+TGG - chr2_1:68366333-68366352 None:intergenic 25.0%
!! GATTGTGTAATGTAATTTTG+TGG - chr2_1:68367291-68367310 None:intergenic 25.0%
!! TTATTTTCTTTTTGCTGCAT+GGG - chr2_1:68367320-68367339 None:intergenic 25.0%
!!! TTTATTTTCTTTTTGCTGCA+TGG - chr2_1:68367321-68367340 None:intergenic 25.0%
! TTCATTAACTGAAAAGGTTA+AGG - chr2_1:68367450-68367469 None:intergenic 25.0%
! TCTTCATTCATTAACTGAAA+AGG - chr2_1:68367456-68367475 None:intergenic 25.0%
! TTTCAGTTAATGAATGAAGA+AGG + chr2_1:68367456-68367475 Msa0220170:intron 25.0%
! TCATATAGATTTCTGTACAA+AGG - chr2_1:68367516-68367535 None:intergenic 25.0%
! TCTATATGATGTTAAAAGCT+AGG + chr2_1:68367527-68367546 Msa0220170:intron 25.0%
! AGATAAGTTTAATGTGTCAA+TGG + chr2_1:68368086-68368105 Msa0220170:intron 25.0%
!! TTTGAGATGCTAAAGTTAAT+AGG - chr2_1:68368203-68368222 None:intergenic 25.0%
! TTCTAATTCTAGACAACAAA+AGG + chr2_1:68368543-68368562 Msa0220170:CDS 25.0%
! TTTGGAATTGTTGAAGAAGT+AGG - chr2_1:68358365-68358384 None:intergenic 30.0%
ATCATGTTCTTGAGCATATT+GGG + chr2_1:68358437-68358456 Msa0220170:intron 30.0%
ATCAGCATCACAGAAAAATA+TGG + chr2_1:68358502-68358521 Msa0220170:intron 30.0%
TCACTCAAATTCAAAATTGG+AGG - chr2_1:68358685-68358704 None:intergenic 30.0%
GAATCTTGGGAATCATATAT+TGG + chr2_1:68358778-68358797 Msa0220170:intron 30.0%
AAACATCAAACATGTGACAA+AGG + chr2_1:68358923-68358942 Msa0220170:intron 30.0%
GTGTTCAAATCCTTGTAAAA+TGG + chr2_1:68359019-68359038 Msa0220170:intron 30.0%
AAACAGGAACAATTAGAAGT+GGG + chr2_1:68359106-68359125 Msa0220170:intron 30.0%
TATTCTTAGACCATCTACAA+TGG + chr2_1:68359247-68359266 Msa0220170:intron 30.0%
CAATGAATATGGTGCTTATA+AGG + chr2_1:68359316-68359335 Msa0220170:intron 30.0%
AATGAATAACATGAGAGAGA+GGG - chr2_1:68359361-68359380 None:intergenic 30.0%
GAAGAAATTTGGAAGCAAAT+TGG + chr2_1:68359559-68359578 Msa0220170:intron 30.0%
!! TTTTAGAAGAATTCTTGGCT+AGG + chr2_1:68359630-68359649 Msa0220170:intron 30.0%
TTTAGAAGAATTCTTGGCTA+GGG + chr2_1:68359631-68359650 Msa0220170:intron 30.0%
CAAAGGGAAAAAGAAGAAAA+AGG + chr2_1:68359713-68359732 Msa0220170:intron 30.0%
CATCTTATATGCTTTACAAC+AGG + chr2_1:68359741-68359760 Msa0220170:intron 30.0%
TGGTTTATAAGTGAAAAAGG+GGG + chr2_1:68359862-68359881 Msa0220170:intron 30.0%
TAAATACATTACTATCCGAG+TGG - chr2_1:68360036-68360055 None:intergenic 30.0%
ACTCGGATAGTAATGTATTT+AGG + chr2_1:68360035-68360054 Msa0220170:intron 30.0%
TGAGAAAAAGAGATATCTGA+CGG - chr2_1:68360126-68360145 None:intergenic 30.0%
!! AGGATTAGTGTTAGTCATTT+TGG - chr2_1:68360162-68360181 None:intergenic 30.0%
TAATCCTTGAAATAAGTCAC+CGG + chr2_1:68360175-68360194 Msa0220170:intron 30.0%
CTTTACTACCAATTCCATAA+TGG + chr2_1:68360535-68360554 Msa0220170:intron 30.0%
ACGTGCAAACTCATTATTTA+CGG - chr2_1:68360588-68360607 None:intergenic 30.0%
GTGTGGATAAATATAAAGTG+TGG - chr2_1:68360978-68360997 None:intergenic 30.0%
TTATCCACACATATTCACAT+AGG + chr2_1:68360988-68361007 Msa0220170:intron 30.0%
!!! TGGTTTTTTACAACAAACGA+TGG + chr2_1:68361058-68361077 Msa0220170:intron 30.0%
! TTACAACAAACGATGGTTTT+AGG + chr2_1:68361065-68361084 Msa0220170:intron 30.0%
TAGAATCGTTTAGTACTGTA+CGG - chr2_1:68361123-68361142 None:intergenic 30.0%
!! TGGACTTAATTTGTAACAGT+AGG - chr2_1:68361203-68361222 None:intergenic 30.0%
TACAAATTAAGTCCAAATGC+GGG + chr2_1:68361208-68361227 Msa0220170:intron 30.0%
!!! GAACATGGTTTTTGTTTTGT+GGG - chr2_1:68361300-68361319 None:intergenic 30.0%
TGGGTGGGAAATAAAAAAAT+GGG - chr2_1:68361323-68361342 None:intergenic 30.0%
GTAGTAGTGATGTAGAAAAT+AGG - chr2_1:68361438-68361457 None:intergenic 30.0%
GTATTAGTTGTTGAGAAGAA+AGG - chr2_1:68361511-68361530 None:intergenic 30.0%
TTTCTTCTTCAACCAAATTG+AGG + chr2_1:68361695-68361714 Msa0220170:CDS 30.0%
TTCTTCTTCAACCAAATTGA+GGG + chr2_1:68361696-68361715 Msa0220170:CDS 30.0%
TTCTGATTGAATTCCTTCAA+TGG - chr2_1:68361830-68361849 None:intergenic 30.0%
TGAAGGAATTCAATCAGAAA+AGG + chr2_1:68361831-68361850 Msa0220170:intron 30.0%
! AATCATGCCTTTTATTGCTT+TGG + chr2_1:68361914-68361933 Msa0220170:intron 30.0%
TCATGATCCAAAGCAATAAA+AGG - chr2_1:68361924-68361943 None:intergenic 30.0%
! ACAAGCATTGTAACAAAACT+TGG + chr2_1:68362160-68362179 Msa0220170:intron 30.0%
ATAGAAGAACACCTAAAGTT+TGG - chr2_1:68362644-68362663 None:intergenic 30.0%
AAGAGACAATTATTGTGAGA+CGG - chr2_1:68362819-68362838 None:intergenic 30.0%
ATGTTTATGCACGGTTATTA+AGG - chr2_1:68363038-68363057 None:intergenic 30.0%
AGTCGTTTAATGTTTATGCA+CGG - chr2_1:68363047-68363066 None:intergenic 30.0%
GACTATTATTTAGATACGGA+GGG + chr2_1:68363063-68363082 Msa0220170:intron 30.0%
GGACAATTAATAACTAACCT+TGG + chr2_1:68363193-68363212 Msa0220170:intron 30.0%
! TTTCCACAACAAAATGGTTT+TGG - chr2_1:68363436-68363455 None:intergenic 30.0%
!! AAACCATTTTGTTGTGGAAA+TGG + chr2_1:68363436-68363455 Msa0220170:intron 30.0%
AAACCATTTCCACAACAAAA+TGG - chr2_1:68363442-68363461 None:intergenic 30.0%
!! CTTTATAGAGTACTGATTTC+CGG - chr2_1:68363703-68363722 None:intergenic 30.0%
GAGAAATGGAAAATTCTAGA+AGG + chr2_1:68364130-68364149 Msa0220170:intron 30.0%
GAATTCAATTGTGTGTAGAA+TGG + chr2_1:68364157-68364176 Msa0220170:intron 30.0%
! GGAAAATTTGAGTTTATGCA+TGG + chr2_1:68364178-68364197 Msa0220170:intron 30.0%
! ATCAATAACGGGAAAAGTTA+TGG - chr2_1:68364227-68364246 None:intergenic 30.0%
! GTTTCTAAAAAATGGTGTCA+TGG + chr2_1:68364549-68364568 Msa0220170:intron 30.0%
! ATAAGTAACACACTTGGTTT+TGG - chr2_1:68364939-68364958 None:intergenic 30.0%
AAGATGTAGATAGAGTTGTT+TGG - chr2_1:68365058-68365077 None:intergenic 30.0%
CTTCTTGTCATCCTTAAATT+TGG - chr2_1:68365308-68365327 None:intergenic 30.0%
CAAATTTAAGGATGACAAGA+AGG + chr2_1:68365306-68365325 Msa0220170:CDS 30.0%
AACGGCAATATTATTCAATG+AGG + chr2_1:68365447-68365466 Msa0220170:intron 30.0%
! TACCTGATCAGTATTGAATT+TGG + chr2_1:68365507-68365526 Msa0220170:intron 30.0%
TACCAAATTCAATACTGATC+AGG - chr2_1:68365512-68365531 None:intergenic 30.0%
AGAAAGATGCTTAGTTATTG+TGG + chr2_1:68365795-68365814 Msa0220170:intron 30.0%
GAAAGATGCTTAGTTATTGT+GGG + chr2_1:68365796-68365815 Msa0220170:intron 30.0%
TGATCAACAACTATATCATC+TGG - chr2_1:68365873-68365892 None:intergenic 30.0%
! ACATTGGTTACTGAATTAAG+GGG + chr2_1:68365924-68365943 Msa0220170:intron 30.0%
TGAAAATGGGCATATTCAAA+AGG + chr2_1:68365998-68366017 Msa0220170:intron 30.0%
TCTAAGAATGACATGTAATG+AGG - chr2_1:68366204-68366223 None:intergenic 30.0%
TGATACCAAATTAACTCTAG+AGG + chr2_1:68366334-68366353 Msa0220170:intron 30.0%
CCACTAAAAATAAATTCAGC+TGG - chr2_1:68366383-68366402 None:intergenic 30.0%
!!! CCAGCTGAATTTATTTTTAG+TGG + chr2_1:68366380-68366399 Msa0220170:intron 30.0%
TGGCCATATGTTATATATGA+AGG + chr2_1:68366400-68366419 Msa0220170:intron 30.0%
AAAACAAAAAAGAGCAGCAA+GGG + chr2_1:68366454-68366473 Msa0220170:intron 30.0%
GAAAAGAAAACTAAAGCGTA+GGG + chr2_1:68366476-68366495 Msa0220170:intron 30.0%
GATGACTTCATGACAAAATT+AGG - chr2_1:68366592-68366611 None:intergenic 30.0%
TTCCTTCTTTGATTGTATGA+TGG + chr2_1:68366620-68366639 Msa0220170:intron 30.0%
!! TATGATGGACAAAGTAGTTT+CGG + chr2_1:68366635-68366654 Msa0220170:intron 30.0%
! TCCAATATGTCATTTGAATG+AGG + chr2_1:68366829-68366848 Msa0220170:intron 30.0%
! CCAATATGTCATTTGAATGA+GGG + chr2_1:68366830-68366849 Msa0220170:intron 30.0%
TCACAACCTTTGTAACATAA+GGG - chr2_1:68367180-68367199 None:intergenic 30.0%
ACTGCATTTAAACACATCAA+AGG + chr2_1:68367350-68367369 Msa0220170:intron 30.0%
AGGTTAAGGTTTAGATGTAT+CGG - chr2_1:68367436-68367455 None:intergenic 30.0%
! TGAGAGAATTTTCAGTCATA+AGG - chr2_1:68367486-68367505 None:intergenic 30.0%
! AAAAGCTAGGCGATAATTTT+TGG + chr2_1:68367540-68367559 Msa0220170:intron 30.0%
ACATTTCATCACAGTAACAA+CGG - chr2_1:68367613-68367632 None:intergenic 30.0%
! TGACATTGGAGTCATATTTT+TGG - chr2_1:68367652-68367671 None:intergenic 30.0%
!! AGTTTTATGATTGTTGCAAG+AGG + chr2_1:68367823-68367842 Msa0220170:intron 30.0%
!! GTTAGTTGTTTTCTAGACTA+TGG - chr2_1:68368131-68368150 None:intergenic 30.0%
!!! ATGTATCTTGTGTTTTTGGT+TGG - chr2_1:68368271-68368290 None:intergenic 30.0%
! GTGTATGTATCTTGTGTTTT+TGG - chr2_1:68368275-68368294 None:intergenic 30.0%
!! GTGATTTTGAACTGACTTTA+GGG - chr2_1:68368458-68368477 None:intergenic 30.0%
! TGTCTAGAATTAGAAACCAT+AGG - chr2_1:68368538-68368557 None:intergenic 30.0%
! AAGTTATGTACTTGAGTTGT+TGG + chr2_1:68368593-68368612 Msa0220170:intron 30.0%
! AGTTATGTACTTGAGTTGTT+GGG + chr2_1:68368594-68368613 Msa0220170:intron 30.0%
! TTTGGAATTGTTGAAGAAGT+AGG - chr2_1:68358365-68358384 None:intergenic 30.0%
ATCATGTTCTTGAGCATATT+GGG + chr2_1:68358437-68358456 Msa0220170:intron 30.0%
! TCATCACTCATGAGTTCTTT+TGG - chr2_1:68358383-68358402 None:intergenic 35.0%
AAGAACATGATGGTTCTCAA+TGG - chr2_1:68358428-68358447 None:intergenic 35.0%
CAATATGCTCAAGAACATGA+TGG - chr2_1:68358438-68358457 None:intergenic 35.0%
CATCATGTTCTTGAGCATAT+TGG + chr2_1:68358436-68358455 Msa0220170:intron 35.0%
! AAGGCAGATCATTTTGCTTA+GGG + chr2_1:68358737-68358756 Msa0220170:intron 35.0%
ATTTGTCAAGAGGGAATCTT+GGG + chr2_1:68358765-68358784 Msa0220170:intron 35.0%
TGAATATGATCGATCATGCT+AGG - chr2_1:68358960-68358979 None:intergenic 35.0%
! AAAGAGTGACCCATTTTACA+AGG - chr2_1:68359032-68359051 None:intergenic 35.0%
TACTAGAAGTTCATGCAAAC+AGG + chr2_1:68359090-68359109 Msa0220170:intron 35.0%
CAAACAGGAACAATTAGAAG+TGG + chr2_1:68359105-68359124 Msa0220170:intron 35.0%
TACCGAAATGGAAATAATGG+TGG + chr2_1:68359185-68359204 Msa0220170:intron 35.0%
CACCACCATTATTTCCATTT+CGG - chr2_1:68359190-68359209 None:intergenic 35.0%
CAATATTTGTCGTCAACATG+CGG - chr2_1:68359222-68359241 None:intergenic 35.0%
CAATGAATAACATGAGAGAG+AGG - chr2_1:68359362-68359381 None:intergenic 35.0%
CTCTCTCTCATGTTATTCAT+TGG + chr2_1:68359360-68359379 Msa0220170:intron 35.0%
!!! AAGTCGTTTTTTAATCGCGT+TGG - chr2_1:68359589-68359608 None:intergenic 35.0%
TTAGAAGAATTCTTGGCTAG+GGG + chr2_1:68359632-68359651 Msa0220170:intron 35.0%
!!! TCCTCAACTTTTTCGTATTG+CGG + chr2_1:68359677-68359696 Msa0220170:intron 35.0%
TATATGCTTTACAACAGGCA+TGG + chr2_1:68359746-68359765 Msa0220170:intron 35.0%
ATCGCATAAAACGTCTATTG+TGG + chr2_1:68359836-68359855 Msa0220170:intron 35.0%
TAAAACGTCTATTGTGGTCA+TGG + chr2_1:68359842-68359861 Msa0220170:intron 35.0%
TAGCAAAACTTGATTCCACT+CGG + chr2_1:68360018-68360037 Msa0220170:intron 35.0%
TTTACCGGTGACTTATTTCA+AGG - chr2_1:68360182-68360201 None:intergenic 35.0%
TGGAGAGGAAAAATATTGCA+TGG - chr2_1:68360239-68360258 None:intergenic 35.0%
AGCGAAAATAAACATAGCAG+AGG + chr2_1:68360275-68360294 Msa0220170:intron 35.0%
!! AATTGAATGGCCTTATGGAT+AGG - chr2_1:68360396-68360415 None:intergenic 35.0%
CATTCAATTACGACTATCGA+CGG + chr2_1:68360407-68360426 Msa0220170:intron 35.0%
AAAACAAACAGGTTGCAGAA+AGG + chr2_1:68360456-68360475 Msa0220170:intron 35.0%
! AATACATGAGCACTGCTAAA+TGG - chr2_1:68360654-68360673 None:intergenic 35.0%
!! AATTTGGTGCAGCTGAAATT+TGG - chr2_1:68361022-68361041 None:intergenic 35.0%
! GCAGGTGATGATGTATAATT+TGG - chr2_1:68361038-68361057 None:intergenic 35.0%
AATTATACATCATCACCTGC+TGG + chr2_1:68361038-68361057 Msa0220170:intron 35.0%
!! GTTTGTTGTAAAAAACCAGC+AGG - chr2_1:68361056-68361075 None:intergenic 35.0%
ACAAATTAAGTCCAAATGCG+GGG + chr2_1:68361209-68361228 Msa0220170:intron 35.0%
AATATATCAATCCCCGCATT+TGG - chr2_1:68361223-68361242 None:intergenic 35.0%
! TGTGGGTTATTTGTGTTGTT+AGG - chr2_1:68361283-68361302 None:intergenic 35.0%
!!! GGAACATGGTTTTTGTTTTG+TGG - chr2_1:68361301-68361320 None:intergenic 35.0%
GGGTGGGAAATAAAAAAATG+GGG - chr2_1:68361322-68361341 None:intergenic 35.0%
GTGGGTGGGAAATAAAAAAA+TGG - chr2_1:68361324-68361343 None:intergenic 35.0%
! GTGACAATAATTAGTTTGGG+AGG - chr2_1:68361373-68361392 None:intergenic 35.0%
CAATTTCTCATCCCTCAATT+TGG - chr2_1:68361710-68361729 None:intergenic 35.0%
! ATTTTCAGTCGAACCATTGA+AGG + chr2_1:68361814-68361833 Msa0220170:intron 35.0%
! TATTGCTTTGGATCATGAAG+TGG + chr2_1:68361926-68361945 Msa0220170:intron 35.0%
!! TAGCTTTGAACATAAAGTGG+AGG + chr2_1:68362268-68362287 Msa0220170:intron 35.0%
CATGAAGATGTCCAAACTTT+AGG + chr2_1:68362630-68362649 Msa0220170:intron 35.0%
AGTTAGTGAAGTGGTTAAGT+TGG - chr2_1:68362946-68362965 None:intergenic 35.0%
CGACTATTATTTAGATACGG+AGG + chr2_1:68363062-68363081 Msa0220170:intron 35.0%
! TTGATAGTTATTGATGGGAG+TGG + chr2_1:68363224-68363243 Msa0220170:intron 35.0%
GAATTTATGCACTGTGCATA+AGG - chr2_1:68363269-68363288 None:intergenic 35.0%
!! TTCAGTTTGTTTTCGCGTTT+GGG - chr2_1:68363314-68363333 None:intergenic 35.0%
!! ATTCAGTTTGTTTTCGCGTT+TGG - chr2_1:68363315-68363334 None:intergenic 35.0%
!!! ACAAAATGGTTTTGGCATTC+CGG - chr2_1:68363428-68363447 None:intergenic 35.0%
! ATGCCAAAACCATTTTGTTG+TGG + chr2_1:68363430-68363449 Msa0220170:intron 35.0%
AACCATTTCCACAGCAAAAT+GGG - chr2_1:68363484-68363503 None:intergenic 35.0%
AAACCATTTCCACAGCAAAA+TGG - chr2_1:68363485-68363504 None:intergenic 35.0%
! TTTCCACAGCAAAATGGTTT+TGG - chr2_1:68363576-68363595 None:intergenic 35.0%
! AATGGTTTTCCACAGCAAAA+TGG - chr2_1:68363582-68363601 None:intergenic 35.0%
CGGAAATCAGTACTCTATAA+AGG + chr2_1:68363701-68363720 Msa0220170:intron 35.0%
ATACATGGCGATGATGAAAA+CGG + chr2_1:68364085-68364104 Msa0220170:intron 35.0%
GAGAGAACAAAGATGAGAAA+TGG + chr2_1:68364116-68364135 Msa0220170:intron 35.0%
!! TTTTAGGCACGTTTAGGATA+AGG + chr2_1:68364805-68364824 Msa0220170:intron 35.0%
AAGGACCTATTAAAGTGAGT+TGG + chr2_1:68364824-68364843 Msa0220170:intron 35.0%
! ACCTATTAAAGTGAGTTGGA+TGG + chr2_1:68364828-68364847 Msa0220170:intron 35.0%
TCCATCCAACTCACTTTAAT+AGG - chr2_1:68364832-68364851 None:intergenic 35.0%
AGCTAGATAAGTAACACACT+TGG - chr2_1:68364945-68364964 None:intergenic 35.0%
TTACTTATCTAGCTAGCTCA+TGG + chr2_1:68364951-68364970 Msa0220170:intron 35.0%
! TGTTGATTGATGGAGTAGAA+AGG - chr2_1:68365017-68365036 None:intergenic 35.0%
CTTGAGACATTGATCTAACA+CGG - chr2_1:68365252-68365271 None:intergenic 35.0%
! AGTCATGTACTTGAGTTGTT+GGG + chr2_1:68365357-68365376 Msa0220170:intron 35.0%
CACTGAGAAACATAGATATG+TGG - chr2_1:68365485-68365504 None:intergenic 35.0%
AATTTGAGCTGAGAGCTTAA+AGG + chr2_1:68365592-68365611 Msa0220170:intron 35.0%
GTGTATTACGATCGAATAGA+TGG + chr2_1:68365644-68365663 Msa0220170:intron 35.0%
ACCCTATTACACAATAGATC+TGG + chr2_1:68365897-68365916 Msa0220170:intron 35.0%
CCCAGATCTATTGTGTAATA+GGG - chr2_1:68365901-68365920 None:intergenic 35.0%
CCCTATTACACAATAGATCT+GGG + chr2_1:68365898-68365917 Msa0220170:intron 35.0%
CCTATTACACAATAGATCTG+GGG + chr2_1:68365899-68365918 Msa0220170:intron 35.0%
! TACATCAGTAGTGCTGAAAA+TGG + chr2_1:68365984-68366003 Msa0220170:intron 35.0%
! ACATCAGTAGTGCTGAAAAT+GGG + chr2_1:68365985-68366004 Msa0220170:intron 35.0%
AATTCAGATGAAGATCGTGT+TGG + chr2_1:68366089-68366108 Msa0220170:intron 35.0%
!! CACATCCTCTAGAGTTAATT+TGG - chr2_1:68366342-68366361 None:intergenic 35.0%
CAAAACAAAAAAGAGCAGCA+AGG + chr2_1:68366453-68366472 Msa0220170:intron 35.0%
GGAAAAGAAAACTAAAGCGT+AGG + chr2_1:68366475-68366494 Msa0220170:intron 35.0%
TTGTCATGAAGTCATCACTA+TGG + chr2_1:68366596-68366615 Msa0220170:intron 35.0%
GTCCATCATACAATCAAAGA+AGG - chr2_1:68366625-68366644 None:intergenic 35.0%
!! ATGATGGACAAAGTAGTTTC+GGG + chr2_1:68366636-68366655 Msa0220170:intron 35.0%
CTCTCAATCAATCTCATCTT+GGG - chr2_1:68366724-68366743 None:intergenic 35.0%
TCTCTCAATCAATCTCATCT+TGG - chr2_1:68366725-68366744 None:intergenic 35.0%
AGATGAGATTGATTGAGAGA+AGG + chr2_1:68366725-68366744 Msa0220170:intron 35.0%
GATGAGATTGATTGAGAGAA+GGG + chr2_1:68366726-68366745 Msa0220170:intron 35.0%
CCCTCATTCAAATGACATAT+TGG - chr2_1:68366833-68366852 None:intergenic 35.0%
TGTTCCATTCTCAATGTTGA+TGG - chr2_1:68366953-68366972 None:intergenic 35.0%
CTCACAACCTTTGTAACATA+AGG - chr2_1:68367181-68367200 None:intergenic 35.0%
TTGATTGTGATTGTCTCACT+TGG - chr2_1:68367385-68367404 None:intergenic 35.0%
!!! AGTCATATTTTTGGCTGGTT+AGG - chr2_1:68367643-68367662 None:intergenic 35.0%
!!! ATTGGAGTCATATTTTTGGC+TGG - chr2_1:68367648-68367667 None:intergenic 35.0%
GACTTTATTACAGGTGACAT+TGG - chr2_1:68367666-68367685 None:intergenic 35.0%
TTTCAACGCGACTTTATTAC+AGG - chr2_1:68367675-68367694 None:intergenic 35.0%
TTTCAAACAACGACATTCAG+TGG + chr2_1:68367713-68367732 Msa0220170:intron 35.0%
TATATAGAAGACAGTGACAG+TGG - chr2_1:68367990-68368009 None:intergenic 35.0%
AAAGAATAGGAAAATACCGG+GGG - chr2_1:68368166-68368185 None:intergenic 35.0%
CAAAGAATAGGAAAATACCG+GGG - chr2_1:68368167-68368186 None:intergenic 35.0%
CCAAAGAATAGGAAAATACC+GGG - chr2_1:68368168-68368187 None:intergenic 35.0%
CCCAAAGAATAGGAAAATAC+CGG - chr2_1:68368169-68368188 None:intergenic 35.0%
! CCGGTATTTTCCTATTCTTT+GGG + chr2_1:68368166-68368185 Msa0220170:intron 35.0%
AGATGAAAAGCCCAAAGAAT+AGG - chr2_1:68368179-68368198 None:intergenic 35.0%
AAGATCAAGGAATATGCAGA+TGG + chr2_1:68368425-68368444 Msa0220170:CDS 35.0%
!! TTTGAACTGACTTTAGGGTA+TGG - chr2_1:68368453-68368472 None:intergenic 35.0%
!! CGTGATTTTGAACTGACTTT+AGG - chr2_1:68368459-68368478 None:intergenic 35.0%
TTCATCTTCTTCTTCTCCTA+TGG + chr2_1:68368519-68368538 Msa0220170:CDS 35.0%
AGCAATCAGAGGAATCTTTA+AGG + chr2_1:68368569-68368588 Msa0220170:CDS 35.0%
! GTTATGTACTTGAGTTGTTG+GGG + chr2_1:68368595-68368614 Msa0220170:intron 35.0%
! TCATCACTCATGAGTTCTTT+TGG - chr2_1:68358383-68358402 None:intergenic 35.0%
AAAAGAACTCATGAGTGATG+AGG + chr2_1:68358382-68358401 Msa0220170:CDS 35.0%
CAATATGCTCAAGAACATGA+TGG - chr2_1:68358438-68358457 None:intergenic 35.0%
CATCATGTTCTTGAGCATAT+TGG + chr2_1:68358436-68358455 Msa0220170:intron 35.0%
TCATGAGTGATGAGAAGAAG+AGG + chr2_1:68358390-68358409 Msa0220170:CDS 40.0%
AACTCTTGCATTGAGTACCA+TGG + chr2_1:68358714-68358733 Msa0220170:intron 40.0%
! GAAGGCAGATCATTTTGCTT+AGG + chr2_1:68358736-68358755 Msa0220170:intron 40.0%
! TAGGGTTGTCATTTGTCAAG+AGG + chr2_1:68358755-68358774 Msa0220170:intron 40.0%
! AGGGTTGTCATTTGTCAAGA+GGG + chr2_1:68358756-68358775 Msa0220170:intron 40.0%
CATTTGTCAAGAGGGAATCT+TGG + chr2_1:68358764-68358783 Msa0220170:intron 40.0%
GGTCATAGAGCAAGAAAACA+AGG + chr2_1:68358799-68358818 Msa0220170:intron 40.0%
TCAAACATGTGACAAAGGCA+AGG + chr2_1:68358928-68358947 Msa0220170:intron 40.0%
CAAACATGTGACAAAGGCAA+GGG + chr2_1:68358929-68358948 Msa0220170:intron 40.0%
GGTATAACGTCAGAAGATAC+GGG - chr2_1:68359169-68359188 None:intergenic 40.0%
CGGTATAACGTCAGAAGATA+CGG - chr2_1:68359170-68359189 None:intergenic 40.0%
CTTCTGACGTTATACCGAAA+TGG + chr2_1:68359173-68359192 Msa0220170:intron 40.0%
CGCATGTTGACGACAAATAT+TGG + chr2_1:68359220-68359239 Msa0220170:intron 40.0%
AATAGGGAAGCCATTGTAGA+TGG - chr2_1:68359260-68359279 None:intergenic 40.0%
TTCTTGTAGCATATAGCCGT+TGG + chr2_1:68359494-68359513 Msa0220170:intron 40.0%
TCCGCAATACGAAAAAGTTG+AGG - chr2_1:68359681-68359700 None:intergenic 40.0%
CGGAAAACAATGCATGCAAA+GGG + chr2_1:68359697-68359716 Msa0220170:intron 40.0%
ACAACAGCACAACGATTTAC+CGG - chr2_1:68360197-68360216 None:intergenic 40.0%
! CTTGTTGTCAATTAGTGGAG+AGG - chr2_1:68360254-68360273 None:intergenic 40.0%
TGATAGTCTCTACAACACTG+CGG + chr2_1:68360301-68360320 Msa0220170:intron 40.0%
GGTTGTAGTGATAGTAACCA+CGG + chr2_1:68360325-68360344 Msa0220170:intron 40.0%
GTTGCAACAACCTATCCATA+AGG + chr2_1:68360383-68360402 Msa0220170:intron 40.0%
! GTCGTAATTGAATGGCCTTA+TGG - chr2_1:68360401-68360420 None:intergenic 40.0%
CGTCGATAGTCGTAATTGAA+TGG - chr2_1:68360409-68360428 None:intergenic 40.0%
!!! TTTGTTTTTGTTGCCGCCAT+CGG - chr2_1:68360444-68360463 None:intergenic 40.0%
! CAGTAAGGTTACCATTGACT+AGG - chr2_1:68360748-68360767 None:intergenic 40.0%
CTAGTCAATGGTAACCTTAC+TGG + chr2_1:68360746-68360765 Msa0220170:intron 40.0%
TGGACCTATGTGAATATGTG+TGG - chr2_1:68360995-68361014 None:intergenic 40.0%
TGCAGCTGAAATTTGGTACT+TGG - chr2_1:68361015-68361034 None:intergenic 40.0%
GTGATGTAGAAAATAGGCTC+AGG - chr2_1:68361432-68361451 None:intergenic 40.0%
AGGATCAAGGAATATGCAGA+TGG + chr2_1:68361599-68361618 Msa0220170:CDS 40.0%
GGATGAGAAATTGAAGCAGT+CGG + chr2_1:68361717-68361736 Msa0220170:CDS 40.0%
GGAAGATTCAATCAAGCACA+AGG + chr2_1:68361852-68361871 Msa0220170:intron 40.0%
! GGACGTGATTAACTTTTGCA+TGG + chr2_1:68361953-68361972 Msa0220170:intron 40.0%
TTCTATCCAATCTCCCAATG+AGG + chr2_1:68362598-68362617 Msa0220170:intron 40.0%
CATGTTGTTCTCACCTCATT+GGG - chr2_1:68362614-68362633 None:intergenic 40.0%
TCATGTTGTTCTCACCTCAT+TGG - chr2_1:68362615-68362634 None:intergenic 40.0%
GACAATTATTGTGAGACGGA+GGG - chr2_1:68362815-68362834 None:intergenic 40.0%
AGACAATTATTGTGAGACGG+AGG - chr2_1:68362816-68362835 None:intergenic 40.0%
GTTATTGATGGGAGTGGTTA+TGG + chr2_1:68363230-68363249 Msa0220170:intron 40.0%
GGTGTAGGAAGCAATTATGT+TGG - chr2_1:68363291-68363310 None:intergenic 40.0%
!! TCAGTTTGTTTTCGCGTTTG+GGG - chr2_1:68363313-68363332 None:intergenic 40.0%
GATGAGATTGAAGATTCCAG+TGG - chr2_1:68363362-68363381 None:intergenic 40.0%
! TTTCCACAGCAAAATGGGTT+TGG - chr2_1:68363479-68363498 None:intergenic 40.0%
!! AACCCATTTTGCTGTGGAAA+TGG + chr2_1:68363479-68363498 Msa0220170:intron 40.0%
! ACGGTGATGATGATGAACAA+CGG - chr2_1:68363535-68363554 None:intergenic 40.0%
!!! GCAAAATGGTTTTGGCATTC+CGG - chr2_1:68363568-68363587 None:intergenic 40.0%
! ATGCCAAAACCATTTTGCTG+TGG + chr2_1:68363570-68363589 Msa0220170:intron 40.0%
! TGGTTTTCTTTGATCCAGCA+TGG + chr2_1:68363657-68363676 Msa0220170:intron 40.0%
! TGTTTTCAATTGCACCATGC+TGG - chr2_1:68363674-68363693 None:intergenic 40.0%
!! TATAGAGTACTGATTTCCGG+CGG - chr2_1:68363700-68363719 None:intergenic 40.0%
GGTTCTGTTTCCAATTTCAC+TGG - chr2_1:68363741-68363760 None:intergenic 40.0%
GTTGAAACTTAGCCAGAAAC+TGG + chr2_1:68363834-68363853 Msa0220170:intron 40.0%
ACGACAGATGGAATAACATC+AGG + chr2_1:68363861-68363880 Msa0220170:intron 40.0%
ACATCAGGAACTTCAACAGA+AGG + chr2_1:68363876-68363895 Msa0220170:intron 40.0%
AACTTCAACAGAAGGAGAAG+CGG + chr2_1:68363884-68363903 Msa0220170:intron 40.0%
! AGTGTTGGAACAATCGACAT+TGG + chr2_1:68363966-68363985 Msa0220170:intron 40.0%
GTGTTGGAACAATCGACATT+GGG + chr2_1:68363967-68363986 Msa0220170:intron 40.0%
ACAATCGACATTGGGAATGA+TGG + chr2_1:68363975-68363994 Msa0220170:intron 40.0%
GAGTTTATGCATGGTGCATA+AGG + chr2_1:68364187-68364206 Msa0220170:intron 40.0%
AAACCATAGGCTATGTCTAC+CGG - chr2_1:68364914-68364933 None:intergenic 40.0%
!!! CTTGGTTTTGGAGAAACCAT+AGG - chr2_1:68364927-68364946 None:intergenic 40.0%
AAGATCAAGCTGGTATTTGC+AGG + chr2_1:68365185-68365204 Msa0220170:intron 40.0%
! CAGTCATGTACTTGAGTTGT+TGG + chr2_1:68365356-68365375 Msa0220170:intron 40.0%
! GTCATGTACTTGAGTTGTTG+GGG + chr2_1:68365358-68365377 Msa0220170:intron 40.0%
CCCCAGATCTATTGTGTAAT+AGG - chr2_1:68365902-68365921 None:intergenic 40.0%
CAATAGATCTGGGGATACAT+TGG + chr2_1:68365908-68365927 Msa0220170:intron 40.0%
GAATGCTCCTTAAAGTGTGT+TGG + chr2_1:68366281-68366300 Msa0220170:intron 40.0%
!! TCCTTAAAGTGTGTTGGCTT+TGG + chr2_1:68366287-68366306 Msa0220170:intron 40.0%
TCCAAAGCCAACACACTTTA+AGG - chr2_1:68366291-68366310 None:intergenic 40.0%
!! TGGCTTTGGAGAGGTTAATT+TGG + chr2_1:68366301-68366320 Msa0220170:intron 40.0%
GATGACAAACAGATCATCTG+CGG + chr2_1:68366561-68366580 Msa0220170:intron 40.0%
TCAGGACATCAAAGACCTTA+TGG - chr2_1:68366665-68366684 None:intergenic 40.0%
CATTTACGCTGTTCTTGTTC+AGG - chr2_1:68366683-68366702 None:intergenic 40.0%
GAACAAGAACAGCGTAAATG+TGG + chr2_1:68366683-68366702 Msa0220170:intron 40.0%
!! TACCCATGTTGATAGCCATA+TGG + chr2_1:68366776-68366795 Msa0220170:intron 40.0%
CACCATATGGCTATCAACAT+GGG - chr2_1:68366781-68366800 None:intergenic 40.0%
! AATGTTGATGGAGCTGCAAT+GGG - chr2_1:68366941-68366960 None:intergenic 40.0%
AGCTCCATCAACATTGAGAA+TGG + chr2_1:68366946-68366965 Msa0220170:intron 40.0%
AGTAACAAGTCTCGTCGTTA+AGG + chr2_1:68367091-68367110 Msa0220170:intron 40.0%
CTTTGTAACATAAGGGCTCT+TGG - chr2_1:68367173-68367192 None:intergenic 40.0%
CAAGAGCCCTTATGTTACAA+AGG + chr2_1:68367171-68367190 Msa0220170:intron 40.0%
ATTGTGATTGTCTCACTTGG+AGG - chr2_1:68367382-68367401 None:intergenic 40.0%
ATCATCTCCTTCAGCTTGAT+GGG - chr2_1:68367579-68367598 None:intergenic 40.0%
! CGAAGTGTTCACAGTTTACA+TGG + chr2_1:68367848-68367867 Msa0220170:intron 40.0%
! CCCGGTATTTTCCTATTCTT+TGG + chr2_1:68368165-68368184 Msa0220170:intron 40.0%
TTGATGAAGAAGAGTGAAGG+AGG - chr2_1:68368248-68368267 None:intergenic 40.0%
!! TGGTTGATGAAGAAGAGTGA+AGG - chr2_1:68368251-68368270 None:intergenic 40.0%
!! GTGGAAGCATTGAAAGATCA+AGG + chr2_1:68368412-68368431 Msa0220170:CDS 40.0%
ACAAAAGGCAAAGCAATCAG+AGG + chr2_1:68368558-68368577 Msa0220170:CDS 40.0%
AACGAAAGCTCCTCTTAGTT+GGG - chr2_1:68368622-68368641 None:intergenic 40.0%
CTTTCGTTGTTGCAACAAAG+TGG + chr2_1:68368634-68368653 Msa0220170:intron 40.0%
GTTGTTGCAACAAAGTGGAA+TGG + chr2_1:68368639-68368658 Msa0220170:intron 40.0%
TGGATACATCGAAGGATCAA+GGG + chr2_1:68368662-68368681 Msa0220170:intron 40.0%
AGAAGTAGGAGATAGCTTCT+GGG - chr2_1:68358351-68358370 None:intergenic 40.0%
AAGAAGTAGGAGATAGCTTC+TGG - chr2_1:68358352-68358371 None:intergenic 40.0%
TAGCTTCTGTGCATGAGCTA+AGG - chr2_1:68358339-68358358 None:intergenic 45.0%
TGAGAAGAAGAGGAAAGCAG+AGG + chr2_1:68358400-68358419 Msa0220170:CDS 45.0%
CTTGCATTGAGTACCATGGA+AGG + chr2_1:68358718-68358737 Msa0220170:intron 45.0%
GCAAAATGATCTGCCTTCCA+TGG - chr2_1:68358734-68358753 None:intergenic 45.0%
AAGGATTTGAACACCGTCCA+GGG - chr2_1:68359013-68359032 None:intergenic 45.0%
ATTTGTCGTCAACATGCGGA+TGG - chr2_1:68359218-68359237 None:intergenic 45.0%
TGAGGAAACCTGAAGCATAG+TGG - chr2_1:68359663-68359682 None:intergenic 45.0%
GCGGAAAACAATGCATGCAA+AGG + chr2_1:68359696-68359715 Msa0220170:intron 45.0%
TTGCATGGTGAACAGTGAAG+CGG - chr2_1:68360224-68360243 None:intergenic 45.0%
!! CGCTGCTTGTTGTCAATTAG+TGG - chr2_1:68360259-68360278 None:intergenic 45.0%
TGGCGGCAACAAAAACAAAC+AGG + chr2_1:68360445-68360464 Msa0220170:intron 45.0%
AATCTAGCAGCCATGCAAAG+AGG + chr2_1:68360493-68360512 Msa0220170:intron 45.0%
TCCATAACTGCCTCTTTGCA+TGG - chr2_1:68360506-68360525 None:intergenic 45.0%
TAGTACTGTACGGAACCACA+CGG - chr2_1:68361113-68361132 None:intergenic 45.0%
AGCACCTAGTGCAATTTGCA+TGG + chr2_1:68361176-68361195 Msa0220170:intron 45.0%
AGGACCATGCAAATTGCACT+AGG - chr2_1:68361183-68361202 None:intergenic 45.0%
TGAGAAATTGAAGCAGTCGG+AGG + chr2_1:68361720-68361739 Msa0220170:CDS 45.0%
TGTCATGTTCTTGAGCTGCA+GGG + chr2_1:68361756-68361775 Msa0220170:intron 45.0%
TTTGGATCATGAAGTGGTCG+TGG + chr2_1:68361932-68361951 Msa0220170:intron 45.0%
TTCTCACCTCATTGGGAGAT+TGG - chr2_1:68362607-68362626 None:intergenic 45.0%
!! CAGTTTGTTTTCGCGTTTGG+GGG - chr2_1:68363312-68363331 None:intergenic 45.0%
! GTGGTGATGATGATGAACGA+CGG - chr2_1:68363343-68363362 None:intergenic 45.0%
TCGTTCATCATCATCACCAC+TGG + chr2_1:68363343-68363362 Msa0220170:intron 45.0%
!!! ATGGTTTTGGCATTCCGGTA+CGG - chr2_1:68363423-68363442 None:intergenic 45.0%
! ACTCCAAACCCATTTTGCTG+TGG + chr2_1:68363473-68363492 Msa0220170:intron 45.0%
!!! ATGGTTTTGGCATTCCGGTA+TGG - chr2_1:68363423-68363442 None:intergenic 45.0%
GCAATTGAAAACAGAACCGC+CGG + chr2_1:68363681-68363700 Msa0220170:intron 45.0%
ATGAGCTTCGCCAGTGAAAT+TGG + chr2_1:68363728-68363747 Msa0220170:intron 45.0%
GAAATTGGAAACAGAACCGC+CGG + chr2_1:68363743-68363762 Msa0220170:intron 45.0%
ACTCCTCCGATTCTGATTTC+CGG - chr2_1:68363765-68363784 None:intergenic 45.0%
TGAACAGAAACTTCCGACTC+CGG - chr2_1:68363925-68363944 None:intergenic 45.0%
CGGAAGTTTCTGTTCAGCTT+CGG + chr2_1:68363929-68363948 Msa0220170:intron 45.0%
TGTTCCAACACTTCCTTCTC+CGG - chr2_1:68363958-68363977 None:intergenic 45.0%
! CATTGGGAATGATGGAACAG+TGG + chr2_1:68363983-68364002 Msa0220170:intron 45.0%
! AATGATGGAACAGTGGTGAC+CGG + chr2_1:68363990-68364009 Msa0220170:intron 45.0%
!! ACGGTGACAGAAGTTTGTTG+CGG + chr2_1:68364059-68364078 Msa0220170:intron 45.0%
!! AGTTTGTTGCGGTGGATACA+TGG + chr2_1:68364070-68364089 Msa0220170:intron 45.0%
GCGATGATGAAAACGGTTAG+AGG + chr2_1:68364092-68364111 Msa0220170:intron 45.0%
GTTGGATGGAGTGAACGTAA+TGG + chr2_1:68364842-68364861 Msa0220170:intron 45.0%
GAGTGAACGTAATGGCAAAG+TGG + chr2_1:68364850-68364869 Msa0220170:intron 45.0%
!! TAGGCTATGTCTACCGGTTT+CGG - chr2_1:68364908-68364927 None:intergenic 45.0%
AAACCGGTAGACATAGCCTA+TGG + chr2_1:68364908-68364927 Msa0220170:intron 45.0%
CAACAGCAACAAGCAAAGCA+TGG + chr2_1:68365125-68365144 Msa0220170:intron 45.0%
AGCAACAAGCAAAGCATGGA+TGG + chr2_1:68365129-68365148 Msa0220170:intron 45.0%
AACAAGCAAAGCATGGATGG+TGG + chr2_1:68365132-68365151 Msa0220170:intron 45.0%
!! GAGGCTTTGAAAGATCAAGC+TGG + chr2_1:68365175-68365194 Msa0220170:intron 45.0%
ATCAAGCTGGTATTTGCAGG+TGG + chr2_1:68365188-68365207 Msa0220170:intron 45.0%
!! AAAGTGTGTTGGCTTTGGAG+AGG + chr2_1:68366292-68366311 Msa0220170:intron 45.0%
! CTTCTCAGGATGGATTCGAT+GGG - chr2_1:68366511-68366530 None:intergenic 45.0%
! TCTTCTCAGGATGGATTCGA+TGG - chr2_1:68366512-68366531 None:intergenic 45.0%
ATCGAATCCATCCTGAGAAG+AGG + chr2_1:68366511-68366530 Msa0220170:intron 45.0%
AATCCATCCTGAGAAGAGGA+AGG + chr2_1:68366515-68366534 Msa0220170:intron 45.0%
TGTCATCCATTCTTCTCCAC+CGG - chr2_1:68366548-68366567 None:intergenic 45.0%
! AGTAGTTTCGGGTAGCCATA+AGG + chr2_1:68366647-68366666 Msa0220170:intron 45.0%
ACAGCGTAAATGTGGTACTG+CGG + chr2_1:68366691-68366710 Msa0220170:intron 45.0%
CCACCATATGGCTATCAACA+TGG - chr2_1:68366782-68366801 None:intergenic 45.0%
!! CCATGTTGATAGCCATATGG+TGG + chr2_1:68366779-68366798 Msa0220170:intron 45.0%
TGTGCATGCATGTATCTCAC+AGG - chr2_1:68366871-68366890 None:intergenic 45.0%
GTACACCATCAAAACCTGCT+CGG + chr2_1:68366907-68366926 Msa0220170:intron 45.0%
! ATGTTGATGGAGCTGCAATG+GGG - chr2_1:68366940-68366959 None:intergenic 45.0%
! CAATGTTGATGGAGCTGCAA+TGG - chr2_1:68366942-68366961 None:intergenic 45.0%
TCTCTCGTGTTGAAAGCTCA+AGG + chr2_1:68367024-68367043 Msa0220170:intron 45.0%
GATATCTCTAAACCCACTCG+AGG + chr2_1:68367127-68367146 Msa0220170:intron 45.0%
TGTAACATAAGGGCTCTTGG+TGG - chr2_1:68367170-68367189 None:intergenic 45.0%
TTCTCTGATACACATCGTGC+TGG - chr2_1:68367258-68367277 None:intergenic 45.0%
GATCATCTCCTTCAGCTTGA+TGG - chr2_1:68367580-68367599 None:intergenic 45.0%
TAACAATAGCTTTCAGCCCC+CGG + chr2_1:68368147-68368166 Msa0220170:intron 45.0%
TGAGTTCAACAAGCAGAGCA+TGG + chr2_1:68368365-68368384 Msa0220170:intron 45.0%
GAGTTCAACAAGCAGAGCAT+GGG + chr2_1:68368366-68368385 Msa0220170:intron 45.0%
CAACGAAAGCTCCTCTTAGT+TGG - chr2_1:68368623-68368642 None:intergenic 45.0%
GTTGCAACAAAGTGGAATGG+TGG + chr2_1:68368642-68368661 Msa0220170:intron 45.0%
!! TGGAATGGTGGATACATCGA+AGG + chr2_1:68368654-68368673 Msa0220170:intron 45.0%
GTGGATACATCGAAGGATCA+AGG + chr2_1:68368661-68368680 Msa0220170:intron 45.0%
TCATGAGTGATGAGGAGAAG+AGG + chr2_1:68368759-68368778 Msa0220170:CDS 45.0%
GGAAAGCAGAGGAATCATTG+AGG + chr2_1:68368780-68368799 Msa0220170:CDS 45.0%
!!! AATTTTTAATTAATAATTTG+TGG + chr2_1:68364298-68364317 Msa0220170:intron 5.0%
!!! AAACTTTTAAATAATTAAAA+AGG - chr2_1:68364389-68364408 None:intergenic 5.0%
!! CAAAAAAATAATTATATTAT+GGG - chr2_1:68364647-68364666 None:intergenic 5.0%
!!! CATAATATAATTATTTTTTT+GGG + chr2_1:68364646-68364665 Msa0220170:intron 5.0%
!! TAAAAAATATATAAATAAGA+TGG + chr2_1:68368063-68368082 Msa0220170:intron 5.0%
CAAGGATTTGAACACCGTCC+AGG - chr2_1:68359014-68359033 None:intergenic 50.0%
! TTTTCGCACAATCCACGCGA+AGG + chr2_1:68360083-68360102 Msa0220170:intron 50.0%
TGCATGGTGAACAGTGAAGC+GGG - chr2_1:68360223-68360242 None:intergenic 50.0%
TAGTCTCTACAACACTGCGG+TGG + chr2_1:68360304-68360323 Msa0220170:intron 50.0%
GATAGTAACCACGGTGACGA+CGG + chr2_1:68360334-68360353 Msa0220170:intron 50.0%
CGACGGATAGCGCAATCAAT+AGG + chr2_1:68360351-68360370 Msa0220170:intron 50.0%
CGGATAGCGCAATCAATAGG+CGG + chr2_1:68360354-68360373 Msa0220170:intron 50.0%
ACAGGTTGCAGAAAGGCTAC+AGG + chr2_1:68360463-68360482 Msa0220170:intron 50.0%
GCCATGCAAAGAGGCAGTTA+TGG + chr2_1:68360502-68360521 Msa0220170:intron 50.0%
CTCACACATTCCAAACCGTG+TGG + chr2_1:68361095-68361114 Msa0220170:intron 50.0%
ATGCTGAGTGGAGTACGTGT+GGG - chr2_1:68361342-68361361 None:intergenic 50.0%
GAGGAAAACCAGATGCTGAG+TGG - chr2_1:68361354-68361373 None:intergenic 50.0%
TGAGTTCAAGAAGCCGAGCA+TGG + chr2_1:68361533-68361552 Msa0220170:intron 50.0%
CAAGAAGCCGAGCATGGAAA+TGG + chr2_1:68361539-68361558 Msa0220170:intron 50.0%
CCACACTCCATTTCCATGCT+CGG - chr2_1:68361549-68361568 None:intergenic 50.0%
TGGAGTGTGGCAACAAGTGT+TGG + chr2_1:68361559-68361578 Msa0220170:CDS 50.0%
!! TGTGGCAACAAGTGTTGGAG+TGG + chr2_1:68361564-68361583 Msa0220170:CDS 50.0%
!! AACAAGTGTTGGAGTGGTGG+AGG + chr2_1:68361570-68361589 Msa0220170:CDS 50.0%
!! GTGGAGGCTTTGAAGGATCA+AGG + chr2_1:68361586-68361605 Msa0220170:CDS 50.0%
CTGTCATGTTCTTGAGCTGC+AGG + chr2_1:68361755-68361774 Msa0220170:intron 50.0%
GTCATGTTCTTGAGCTGCAG+GGG + chr2_1:68361757-68361776 Msa0220170:intron 50.0%
GGGAGTGGTTATGGTGCATA+AGG + chr2_1:68363239-68363258 Msa0220170:intron 50.0%
! TTCCGGTACGGTGATGATGA+CGG - chr2_1:68363411-68363430 None:intergenic 50.0%
CATCACCGTCATCACCATAC+CGG + chr2_1:68363546-68363565 Msa0220170:intron 50.0%
! GCATTCCGGTATGGTGATGA+CGG - chr2_1:68363554-68363573 None:intergenic 50.0%
GAACCGCCGGAAATCAGAAT+CGG + chr2_1:68363756-68363775 Msa0220170:intron 50.0%
ATCGGAGGAGTAGCGATGAT+CGG + chr2_1:68363774-68363793 Msa0220170:intron 50.0%
TCTGTCGTTGCACCAGTTTC+TGG - chr2_1:68363849-68363868 None:intergenic 50.0%
GAAACTGGTGCAACGACAGA+TGG + chr2_1:68363849-68363868 Msa0220170:intron 50.0%
TTCAACAGAAGGAGAAGCGG+TGG + chr2_1:68363887-68363906 Msa0220170:intron 50.0%
!! GTGACAGAAGTTTGTTGCGG+TGG + chr2_1:68364062-68364081 Msa0220170:intron 50.0%
!! AGGCTATGTCTACCGGTTTC+GGG - chr2_1:68364907-68364926 None:intergenic 50.0%
!! TGCAAGTGTTGGAGTTGTGG+AGG + chr2_1:68365156-68365175 Msa0220170:intron 50.0%
GGATGACAAGAAGGCCAAAC+AGG + chr2_1:68365315-68365334 Msa0220170:CDS 50.0%
CAAAGACTCCTCTGCCTGTT+TGG - chr2_1:68365332-68365351 None:intergenic 50.0%
AACAGGCAGAGGAGTCTTTG+AGG + chr2_1:68365332-68365351 Msa0220170:CDS 50.0%
TTGACCTCCTTCCTCTTCTC+AGG - chr2_1:68366525-68366544 None:intergenic 50.0%
AGAAGAGGAAGGAGGTCAAC+CGG + chr2_1:68366526-68366545 Msa0220170:intron 50.0%
GAGCTCACAACTACTCACTG+CGG - chr2_1:68366805-68366824 None:intergenic 50.0%
!! CCAATCCGAGCAGGTTTTGA+TGG - chr2_1:68366915-68366934 None:intergenic 50.0%
CCATCAAAACCTGCTCGGAT+TGG + chr2_1:68366912-68366931 Msa0220170:intron 50.0%
CTCGTGTTGAAAGCTCAAGG+TGG + chr2_1:68367027-68367046 Msa0220170:intron 50.0%
GTGTTGAAAGCTCAAGGTGG+TGG + chr2_1:68367030-68367049 Msa0220170:intron 50.0%
TGATACACATCGTGCTGGAG+GGG - chr2_1:68367253-68367272 None:intergenic 50.0%
CTGATACACATCGTGCTGGA+GGG - chr2_1:68367254-68367273 None:intergenic 50.0%
TCTGATACACATCGTGCTGG+AGG - chr2_1:68367255-68367274 None:intergenic 50.0%
AGACAGTGACAGTGGCAAGA+TGG - chr2_1:68367982-68368001 None:intergenic 50.0%
TTGTTGGGGTCCCAACTAAG+AGG + chr2_1:68368609-68368628 Msa0220170:intron 50.0%
TAGCTTCTGGGCATGAGCTA+AGG - chr2_1:68368708-68368727 None:intergenic 50.0%
TGAGGAGAAGAGGAAAGCAG+AGG + chr2_1:68368769-68368788 Msa0220170:CDS 50.0%
GGGCAGAGGATGATCTGTTC+TGG - chr2_1:68359149-68359168 None:intergenic 55.0%
ACGTCAGAAGATACGGGCAG+AGG - chr2_1:68359163-68359182 None:intergenic 55.0%
AATGCTACACCTCCTTCGCG+TGG - chr2_1:68360098-68360117 None:intergenic 55.0%
GCATGGTGAACAGTGAAGCG+GGG - chr2_1:68360222-68360241 None:intergenic 55.0%
GGTTGCAGAAAGGCTACAGG+TGG + chr2_1:68360466-68360485 Msa0220170:intron 55.0%
TGCAGAAAGGCTACAGGTGG+TGG + chr2_1:68360469-68360488 Msa0220170:intron 55.0%
CTGTACGGAACCACACGGTT+TGG - chr2_1:68361108-68361127 None:intergenic 55.0%
TGAGTGGAGTACGTGTGGGT+GGG - chr2_1:68361338-68361357 None:intergenic 55.0%
GATGCTGAGTGGAGTACGTG+TGG - chr2_1:68361343-68361362 None:intergenic 55.0%
CACGTACTCCACTCAGCATC+TGG + chr2_1:68361343-68361362 Msa0220170:intron 55.0%
CCGAGCATGGAAATGGAGTG+TGG + chr2_1:68361546-68361565 Msa0220170:CDS 55.0%
!! GGCAACAAGTGTTGGAGTGG+TGG + chr2_1:68361567-68361586 Msa0220170:CDS 55.0%
! TGGAGTGGTGGAGGCTTTGA+AGG + chr2_1:68361579-68361598 Msa0220170:CDS 55.0%
!! GTTTTCGCGTTTGGGGGTGT+AGG - chr2_1:68363306-68363325 None:intergenic 55.0%
CACCGTCATCATCACCGTAC+CGG + chr2_1:68363406-68363425 Msa0220170:intron 55.0%
CCTCCGATTCTGATTTCCGG+CGG - chr2_1:68363762-68363781 None:intergenic 55.0%
GAAACTTCCGACTCCGGTGA+CGG - chr2_1:68363919-68363938 None:intergenic 55.0%
TTCTGTTCAGCTTCGGTCGC+CGG + chr2_1:68363936-68363955 Msa0220170:intron 55.0%
!! CGGAAGGATTGGTGCTGCAA+CGG + chr2_1:68364040-68364059 Msa0220170:intron 55.0%
TAAATTCAGGGGTTGCCCCG+AGG - chr2_1:68364601-68364620 None:intergenic 55.0%
! TGGATGGTGGCTGCAAGTGT+TGG + chr2_1:68365145-68365164 Msa0220170:intron 55.0%
!! GGCTGCAAGTGTTGGAGTTG+TGG + chr2_1:68365153-68365172 Msa0220170:intron 55.0%
CAAGAAGGCCAAACAGGCAG+AGG + chr2_1:68365321-68365340 Msa0220170:CDS 55.0%
CCTCCTTCCTCTTCTCAGGA+TGG - chr2_1:68366521-68366540 None:intergenic 55.0%
CCATCCTGAGAAGAGGAAGG+AGG + chr2_1:68366518-68366537 Msa0220170:intron 55.0%
GGTCAACCGGTGGAGAAGAA+TGG + chr2_1:68366539-68366558 Msa0220170:intron 55.0%
TACTCACTGCGGCCACCATA+TGG - chr2_1:68366794-68366813 None:intergenic 55.0%
AATGGGGTTCCAATCCGAGC+AGG - chr2_1:68366924-68366943 None:intergenic 55.0%
TCTCTAAACCCACTCGAGGC+TGG + chr2_1:68367131-68367150 Msa0220170:intron 55.0%
!! CTTCAGCTTGATGGGCTAGG+AGG - chr2_1:68367571-68367590 None:intergenic 55.0%
CTCCTAGCCCATCAAGCTGA+AGG + chr2_1:68367569-68367588 Msa0220170:intron 55.0%
!! CTCCTTCAGCTTGATGGGCT+AGG - chr2_1:68367574-68367593 None:intergenic 55.0%
TGCAGGCAGTGTTGCAGTTG+TGG + chr2_1:68368393-68368412 Msa0220170:CDS 55.0%
AGCTAGTCCACGAGTGTCCC+TGG + chr2_1:68358993-68359012 Msa0220170:intron 60.0%
AGTCCACGAGTGTCCCTGGA+CGG + chr2_1:68358997-68359016 Msa0220170:intron 60.0%
GGGAGCAGCCACTATGCTTC+AGG + chr2_1:68359652-68359671 Msa0220170:intron 60.0%
TCGCACAATCCACGCGAAGG+AGG + chr2_1:68360086-68360105 Msa0220170:intron 60.0%
ACGACTATCGACGGCAGCGA+CGG + chr2_1:68360416-68360435 Msa0220170:intron 60.0%
CTGAGTGGAGTACGTGTGGG+TGG - chr2_1:68361339-68361358 None:intergenic 60.0%
CCGCCGGAAATCAGAATCGG+AGG + chr2_1:68363759-68363778 Msa0220170:intron 60.0%
! GTCGCCGGAGAAGGAAGTGT+TGG + chr2_1:68363951-68363970 Msa0220170:intron 60.0%
GATGGAACAGTGGTGACCGG+AGG + chr2_1:68363993-68364012 Msa0220170:intron 60.0%
GACCGGAGGAGATGCATGCA+CGG + chr2_1:68364007-68364026 Msa0220170:intron 60.0%
AGATGCATGCACGGCGGAAG+AGG + chr2_1:68364016-68364035 Msa0220170:intron 60.0%
GCGGAAGAGGACGGAAGGAT+TGG + chr2_1:68364029-68364048 Msa0220170:intron 60.0%
AGAGGAAGGAGGTCAACCGG+TGG + chr2_1:68366529-68366548 Msa0220170:intron 60.0%
AAACCCACTCGAGGCTGGCA+AGG + chr2_1:68367136-68367155 Msa0220170:intron 60.0%
CTTCCTTGCCAGCCTCGAGT+GGG - chr2_1:68367142-68367161 None:intergenic 60.0%
TCTTCCTTGCCAGCCTCGAG+TGG - chr2_1:68367143-68367162 None:intergenic 60.0%
AGCAGAGCATGGGTAGCTGC+AGG + chr2_1:68368376-68368395 Msa0220170:intron 60.0%
ACACCGTCCAGGGACACTCG+TGG - chr2_1:68359003-68359022 None:intergenic 65.0%
TGCGCTATCCGTCGTCACCG+TGG - chr2_1:68360345-68360364 None:intergenic 65.0%
!! TCCGACTCCGGTGACGGAGA+CGG - chr2_1:68363913-68363932 None:intergenic 65.0%
TCAGCTTCGGTCGCCGGAGA+AGG + chr2_1:68363942-68363961 Msa0220170:intron 65.0%
CGCCGTGCATGCATCTCCTC+CGG - chr2_1:68364012-68364031 None:intergenic 65.0%
CGGAGGAGATGCATGCACGG+CGG + chr2_1:68364010-68364029 Msa0220170:intron 65.0%
GCATGCACGGCGGAAGAGGA+CGG + chr2_1:68364020-68364039 Msa0220170:intron 65.0%
GTGGACGGGAGAGGCGACAT+CGG - chr2_1:68364579-68364598 None:intergenic 65.0%
ATTCAGGGGTTGCCCCGAGG+TGG - chr2_1:68364598-68364617 None:intergenic 65.0%
GCCGTCTCCGTCACCGGAGT+CGG + chr2_1:68363909-68363928 Msa0220170:intron 70.0%
GCACGGCGGAAGAGGACGGA+AGG + chr2_1:68364024-68364043 Msa0220170:intron 70.0%
GTCGCCTCTCCCGTCCACCT+CGG + chr2_1:68364581-68364600 Msa0220170:intron 70.0%
TCGCCTCTCCCGTCCACCTC+GGG + chr2_1:68364582-68364601 Msa0220170:intron 70.0%
AGGGGTTGCCCCGAGGTGGA+CGG - chr2_1:68364594-68364613 None:intergenic 70.0%
! GACGGCAGCGACGGTGCCGA+TGG + chr2_1:68360425-68360444 Msa0220170:intron 75.0%
!! GGCAGCGACGGTGCCGATGG+CGG + chr2_1:68360428-68360447 Msa0220170:intron 75.0%
GCGGTGGCCGTCTCCGTCAC+CGG + chr2_1:68363903-68363922 Msa0220170:intron 75.0%
CGCCTCTCCCGTCCACCTCG+GGG + chr2_1:68364583-68364602 Msa0220170:intron 75.0%
TGCCCCGAGGTGGACGGGAG+AGG - chr2_1:68364588-68364607 None:intergenic 75.0%
GGGGTTGCCCCGAGGTGGAC+GGG - chr2_1:68364593-68364612 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 68358329 68368841 68358329 ID=Msa0220170;Name=Msa0220170
chr2_1 mRNA 68358329 68368841 68358329 ID=Msa0220170-mRNA-1;Parent=Msa0220170;Name=Msa0220170-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0.25|0.2|5|0|273
chr2_1 exon 68358329 68358441 68358329 ID=Msa0220170-mRNA-1:exon:19315;Parent=Msa0220170-mRNA-1
chr2_1 exon 68361543 68361761 68361543 ID=Msa0220170-mRNA-1:exon:19316;Parent=Msa0220170-mRNA-1
chr2_1 exon 68365207 68365362 68365207 ID=Msa0220170-mRNA-1:exon:19317;Parent=Msa0220170-mRNA-1
chr2_1 exon 68368381 68368594 68368381 ID=Msa0220170-mRNA-1:exon:19318;Parent=Msa0220170-mRNA-1
chr2_1 exon 68368722 68368841 68368722 ID=Msa0220170-mRNA-1:exon:19319;Parent=Msa0220170-mRNA-1
chr2_1 CDS 68358329 68358441 68358329 ID=Msa0220170-mRNA-1:cds;Parent=Msa0220170-mRNA-1
chr2_1 CDS 68361543 68361761 68361543 ID=Msa0220170-mRNA-1:cds;Parent=Msa0220170-mRNA-1
chr2_1 CDS 68365207 68365362 68365207 ID=Msa0220170-mRNA-1:cds;Parent=Msa0220170-mRNA-1
chr2_1 CDS 68368381 68368594 68368381 ID=Msa0220170-mRNA-1:cds;Parent=Msa0220170-mRNA-1
chr2_1 CDS 68368722 68368841 68368722 ID=Msa0220170-mRNA-1:cds;Parent=Msa0220170-mRNA-1
Gene Sequence

>Msa0220170

ATGAGTTCCTTAGCTCATGCACAGAAGCTATCTCCTACTTCTTCAACAATTCCAAAAGAACTCATGAGTGATGAGAAGAAGAGGAAAGCAGAGGAACCATTGAGAACCATCATAAGCCGAGCATGGAAATGGAGTGTGGCAACAAGTGTTGGAGTGGTGGAGGCTTTGAAGGATCAAGGAATATGCAGATGGAACAGTGTTATAAGATCAGCACAACAGCATGCTAAACATAATATGAGATCATTGTCTCATGCCAACAACAAAATTTCTTCTTCAACCAAATTGAGGGATGAGAAATTGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTGGAACTATGCTTTAAGACAAGCTCAACAACATCTTAAAAACCGTGTTAGATCAATGTCTCAAGCAAAGAATTTCTCTTCTTCTTCATTTGTTGCTACCAAATTTAAGGATGACAAGAAGGCCAAACAGGCAGAGGAGTCTTTGAGGACAGTCATAGCATGGGTAGCTGCAGGCAGTGTTGCAGTTGTGGAAGCATTGAAAGATCAAGGAATATGCAGATGGAACCATACCCTAAAGTCAGTTCAAAATCACGTGAAAAATAATGTCAGATCGTTTTCTCAAGCAAAGAAACTTTCATCTTCTTCTTCTCCTATGGTTTCTAATTCTAGACAACAAAAGGCAAAGCAATCAGAGGAATCTTTAAGGAAAAAGCTATCTCCTACTTCTTCAACAATTCCAAAAGAACTCATGAGTGATGAGGAGAAGAGGAAAGCAGAGGAATCATTGAGGACCATCATGTTCTTGAGCATATTGGGTCCAAATTCTTAG

Protein sequence

>Msa0220170

MSSLAHAQKLSPTSSTIPKELMSDEKKRKAEEPLRTIISRAWKWSVATSVGVVEALKDQGICRWNSVIRSAQQHAKHNMRSLSHANNKISSSTKLRDEKLKQSEESLRTVMWNYALRQAQQHLKNRVRSMSQAKNFSSSSFVATKFKDDKKAKQAEESLRTVIAWVAAGSVAVVEALKDQGICRWNHTLKSVQNHVKNNVRSFSQAKKLSSSSSPMVSNSRQQKAKQSEESLRKKLSPTSSTIPKELMSDEEKRKAEESLRTIMFLSILGPNS*