AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0261480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261480 MtrunA17_Chr2g0323661 95.122 82 4 0 1 82 1 82 1.87e-51 162
Msa0261480 MtrunA17_Chr2g0323661 60.000 80 27 1 161 240 10 84 7.00e-26 96.7
Msa0261480 MtrunA17_Chr2g0323661 63.014 73 21 3 87 159 10 76 4.00e-20 81.6
Msa0261480 MtrunA17_Chr2g0323611 90.361 83 8 0 1 83 1 83 4.37e-49 155
Msa0261480 MtrunA17_Chr2g0323611 58.750 80 28 1 161 240 10 84 8.10e-25 94.0
Msa0261480 MtrunA17_Chr2g0323611 61.644 73 22 3 87 159 10 76 7.47e-20 80.9
Msa0261480 MtrunA17_Chr2g0323571 93.590 78 5 0 82 159 6 83 3.64e-46 149
Msa0261480 MtrunA17_Chr2g0323571 65.854 82 27 1 160 240 10 91 3.41e-30 108
Msa0261480 MtrunA17_Chr2g0323571 65.432 81 22 3 10 84 11 91 7.75e-27 99.4
Msa0261480 MtrunA17_Chr2g0323631 92.308 78 6 0 82 159 6 83 5.27e-46 148
Msa0261480 MtrunA17_Chr2g0323631 61.176 85 32 1 157 240 7 91 3.44e-29 105
Msa0261480 MtrunA17_Chr2g0323631 67.089 79 20 3 10 82 11 89 2.31e-26 98.2
Msa0261480 MtrunA17_Chr2g0323671 92.308 78 6 0 82 159 6 83 1.12e-45 147
Msa0261480 MtrunA17_Chr2g0323671 65.854 82 27 1 160 240 10 91 4.60e-30 107
Msa0261480 MtrunA17_Chr2g0323671 65.432 81 22 3 10 84 11 91 1.71e-26 98.6
Msa0261480 MtrunA17_Chr2g0323601 88.372 86 5 2 160 240 7 92 2.38e-42 139
Msa0261480 MtrunA17_Chr2g0323601 52.128 94 33 2 1 84 1 92 2.38e-23 90.5
Msa0261480 MtrunA17_Chr2g0323601 57.831 83 29 3 82 159 3 84 7.26e-19 78.6
Msa0261480 MtrunA17_Chr2g0323651 83.529 85 10 1 160 240 7 91 9.29e-40 132
Msa0261480 MtrunA17_Chr2g0323651 54.839 93 31 2 1 84 1 91 1.06e-23 91.3
Msa0261480 MtrunA17_Chr2g0323651 58.537 82 29 2 82 159 3 83 4.81e-18 76.6
Msa0261480 MtrunA17_Chr2g0323711 83.529 85 10 1 160 240 7 91 9.29e-40 132
Msa0261480 MtrunA17_Chr2g0323711 54.839 93 31 2 1 84 1 91 1.06e-23 91.3
Msa0261480 MtrunA17_Chr2g0323711 58.537 82 29 2 82 159 3 83 4.81e-18 76.6
Msa0261480 MtrunA17_Chr2g0323681 76.667 90 12 1 160 240 7 96 3.35e-36 123
Msa0261480 MtrunA17_Chr2g0323681 51.020 98 32 2 1 84 1 96 7.03e-22 86.7
Msa0261480 MtrunA17_Chr2g0323681 51.724 87 32 2 82 159 3 88 9.94e-17 73.2
Msa0261480 MtrunA17_Chr4g0022611 74.699 83 19 2 160 240 7 89 4.15e-32 112
Msa0261480 MtrunA17_Chr4g0022611 60.440 91 27 3 1 84 1 89 1.01e-27 101
Msa0261480 MtrunA17_Chr4g0022611 68.831 77 21 2 85 159 6 81 1.33e-25 96.3
Msa0261480 MtrunA17_Chr2g0323701 67.073 82 25 1 161 240 8 89 5.02e-32 112
Msa0261480 MtrunA17_Chr2g0323701 62.500 80 23 1 10 82 8 87 6.86e-29 104
Msa0261480 MtrunA17_Chr2g0323701 62.821 78 24 3 85 159 6 81 8.70e-23 89.0
Msa0261480 MtrunA17_Chr2g0323721 65.854 82 26 1 161 240 8 89 1.68e-30 108
Msa0261480 MtrunA17_Chr2g0323721 59.551 89 27 3 1 82 1 87 1.19e-26 99.0
Msa0261480 MtrunA17_Chr2g0323721 60.526 76 25 3 87 159 8 81 1.01e-20 83.6
Msa0261480 MtrunA17_Chr2g0318611 62.195 82 25 3 160 239 7 84 6.29e-23 89.4
Msa0261480 MtrunA17_Chr2g0318611 56.410 78 31 1 82 159 3 77 7.14e-19 78.6
Msa0261480 MtrunA17_Chr2g0318611 49.438 89 40 3 1 86 1 87 1.61e-17 75.1
Msa0261480 MtrunA17_Chr2g0318601 58.025 81 30 2 160 239 7 84 1.49e-22 88.2
Msa0261480 MtrunA17_Chr2g0318601 46.939 98 29 4 1 86 1 87 5.75e-18 76.3
Msa0261480 MtrunA17_Chr2g0318601 51.282 78 35 1 82 159 3 77 3.32e-17 74.3
Msa0261480 MtrunA17_Chr2g0323551 48.780 82 41 1 160 240 7 88 5.78e-19 79.0
Msa0261480 MtrunA17_Chr2g0323551 54.545 77 29 2 12 82 10 86 2.20e-18 77.4
Msa0261480 MtrunA17_Chr2g0323551 52.500 80 34 4 82 159 3 80 3.33e-14 66.2
Msa0261480 MtrunA17_Chr2g0318641 49.451 91 39 3 70 159 24 108 6.09e-19 79.7
Msa0261480 MtrunA17_Chr2g0318641 51.163 86 32 5 157 239 37 115 7.82e-18 76.6
Msa0261480 MtrunA17_Chr2g0318641 46.512 86 41 4 1 84 34 116 1.13e-14 68.6
Msa0261480 MtrunA17_Chr2g0318591 54.217 83 34 2 158 239 5 84 5.66e-14 65.5
Msa0261480 MtrunA17_Chr2g0318591 54.348 46 21 0 82 127 3 48 3.70e-12 60.8
Msa0261480 MtrunA17_Chr2g0318591 45.977 87 42 3 1 84 1 85 7.44e-12 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261480 AT4G10265.1 65.789 76 21 1 84 159 5 75 1.37e-26 99.0
Msa0261480 AT4G10265.1 58.750 80 27 2 161 239 8 82 3.70e-26 97.8
Msa0261480 AT4G10265.1 60.000 85 31 2 1 84 1 83 1.06e-25 96.7
Msa0261480 AT4G10270.1 59.524 84 31 2 160 240 7 90 4.08e-25 95.1
Msa0261480 AT4G10270.1 65.000 80 26 1 82 159 3 82 2.18e-24 93.2
Msa0261480 AT4G10270.1 50.000 92 36 3 1 84 1 90 3.75e-22 87.4

Find 53 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTGCTACCAAATTTA+AGG 0.083204 2_2:+59923940 Msa0261480:CDS
CTTCTTCTCATCCTTAAATT+TGG 0.217937 2_2:-59923951 None:intergenic
CAAAGACTCCTCTGCCTGTT+TGG 0.289223 2_2:-59923975 None:intergenic
CAAAGATTCCTCCGACTGTT+TGG 0.315084 2_2:-59921924 None:intergenic
AGCAATCAGAGGAATCTTTA+AGG 0.315897 2_2:+59927371 Msa0261480:CDS
CTGTCATGTTCTTGAGCTGC+TGG 0.343401 2_2:+59921951 Msa0261480:CDS
AGTTATGTACTTGAGTTGTT+GGG 0.380679 2_2:+59927396 Msa0261480:CDS
TTCATCTTCTTCTTCTCCTA+TGG 0.383759 2_2:+59927321 Msa0261480:CDS
AAGTTATGTACTTGAGTTGT+TGG 0.395020 2_2:+59927395 Msa0261480:CDS
CAACCAAAGCTCCTCTTAGT+TGG 0.412441 2_2:-59927422 None:intergenic
GGATGAGAAGAAGGCCAAAC+AGG 0.421065 2_2:+59923961 Msa0261480:CDS
TTCTAATTCTAGACAACAAA+AGG 0.422761 2_2:+59927345 Msa0261480:CDS
AATTTCTTCAACAAAATTGA+AGG 0.427677 2_2:+59921892 Msa0261480:CDS
TGTCATGTTCTTGAGCTGCT+GGG 0.448867 2_2:+59921952 Msa0261480:CDS
AACAGGCAGAGGAGTCTTTG+AGG 0.455186 2_2:+59923978 Msa0261480:CDS
GGCTGCAAGTGTTGGAGTTG+TGG 0.471925 2_2:+59923799 Msa0261480:CDS
AACATGCTAAACATAATATC+AGG 0.478609 2_2:+59921846 Msa0261480:CDS
TGGAGTGGTGGAGGCATTGA+AGG 0.481220 2_2:+59921778 Msa0261480:CDS
AACCAAAGCTCCTCTTAGTT+GGG 0.489304 2_2:-59927421 None:intergenic
CAAATTTAAGGATGAGAAGA+AGG 0.489333 2_2:+59923952 Msa0261480:CDS
AGCAGAGCATGGGTAGCTGC+AGG 0.497606 2_2:+59927178 Msa0261480:intron
GTGGAAGCATTGAAAGATCA+AGG 0.506795 2_2:+59927214 Msa0261480:CDS
TTTGAACTGACTTTAGGGTA+TGG 0.511934 2_2:-59927252 None:intergenic
GAAGAAGGCCAAACAGGCAG+AGG 0.519704 2_2:+59923967 Msa0261480:CDS
AGCAACAAGCAAAGCATGGA+TGG 0.538950 2_2:+59923775 Msa0261480:intron
GTGGAGGCATTGAAGGATCA+AGG 0.544470 2_2:+59921785 Msa0261480:CDS
CCACACTCCATGTCCATGCT+CGG 0.550816 2_2:-59921745 None:intergenic
GTTATGTACTTGAGTTGTTG+GGG 0.552188 2_2:+59927397 Msa0261480:CDS
CAAGAAGCCGAGCATGGACA+TGG 0.553815 2_2:+59921738 Msa0261480:CDS
GTCATGTTCTTGAGCTGCTG+GGG 0.555931 2_2:+59921953 Msa0261480:CDS
TGCAGGCAGTGTTGCAGTTG+TGG 0.558647 2_2:+59927195 Msa0261480:CDS
AACAAGTGTTGGAGTGGTGG+AGG 0.565147 2_2:+59921769 Msa0261480:CDS
CTTGAGAAACTGATCTAACA+CGG 0.566307 2_2:-59923895 None:intergenic
GGCAACAAGTGTTGGAGTGG+TGG 0.567978 2_2:+59921766 Msa0261480:CDS
ATAGTTCCACCTACAGATAC+CGG 0.568375 2_2:-59923840 None:intergenic
CAACAGCAACAAGCAAAGCA+TGG 0.569709 2_2:+59923771 Msa0261480:intron
TGGAGTGTGGCAACAAGTGT+TGG 0.572395 2_2:+59921758 Msa0261480:CDS
TGGATGGTGGCTGCAAGTGT+TGG 0.573709 2_2:+59923791 Msa0261480:CDS
TGCAAGTGTTGGAGTTGTGG+AGG 0.587512 2_2:+59923802 Msa0261480:CDS
GAGTTCAACAAGCAGAGCAT+GGG 0.590239 2_2:+59927168 Msa0261480:intron
TGAGTTCAAGAAGCCGAGCA+TGG 0.595479 2_2:+59921732 Msa0261480:CDS
TGTCTAGAATTAGAAACCAT+AGG 0.610973 2_2:-59927337 None:intergenic
AAGATCAAGGAATATGCAGA+TGG 0.613727 2_2:+59927227 Msa0261480:CDS
GGATGAGAAATCCAAACAGT+CGG 0.614147 2_2:+59921913 Msa0261480:CDS
AGGATCAAGGAATATGCAGA+TGG 0.620547 2_2:+59921798 Msa0261480:CDS
CCGAGCATGGACATGGAGTG+TGG 0.625487 2_2:+59921745 Msa0261480:CDS
AAGATCAAGCCGGTATCTGT+AGG 0.628254 2_2:+59923831 Msa0261480:CDS
ATCAAGCCGGTATCTGTAGG+TGG 0.630665 2_2:+59923834 Msa0261480:CDS
AACAAGCAAAGCATGGATGG+TGG 0.650577 2_2:+59923778 Msa0261480:CDS
ACAAAAGGCAAAGCAATCAG+AGG 0.651467 2_2:+59927360 Msa0261480:CDS
TGAGAAATCCAAACAGTCGG+AGG 0.652041 2_2:+59921916 Msa0261480:CDS
TGTGGCAACAAGTGTTGGAG+TGG 0.655283 2_2:+59921763 Msa0261480:CDS
GAGGCTTTGAAAGATCAAGC+CGG 0.680929 2_2:+59923821 Msa0261480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAATAAATTTTTTTT+TGG - chr2_2:59923426-59923445 None:intergenic 0.0%
!!! TTTTCAAAGATATTATATTT+TGG - chr2_2:59922985-59923004 None:intergenic 10.0%
!!! TATGGATAATTTTTTTTTTA+CGG - chr2_2:59924186-59924205 None:intergenic 10.0%
!!! TGATGTTTTTTTTTTATTTG+TGG + chr2_2:59922186-59922205 Msa0261480:intron 15.0%
!! ATTATTAATCTAACAAATTG+TGG - chr2_2:59922384-59922403 None:intergenic 15.0%
!! TGTAACTTATAATTTAATCA+GGG + chr2_2:59922664-59922683 Msa0261480:intron 15.0%
!!! ATTTTGATATTCCTATAAAA+TGG + chr2_2:59922922-59922941 Msa0261480:intron 15.0%
!! CTAATCAAATAAGATTAAAT+AGG - chr2_2:59923059-59923078 None:intergenic 15.0%
!!! ATTTAATCTTATTTGATTAG+AGG + chr2_2:59923059-59923078 Msa0261480:intron 15.0%
!!! AACATCAAAACAAATTTTTT+AGG + chr2_2:59923448-59923467 Msa0261480:intron 15.0%
!!! TTTTATTTAATTTCCAAAAC+CGG + chr2_2:59923550-59923569 Msa0261480:intron 15.0%
!! TATGTACAAATTAATCAATT+GGG - chr2_2:59924031-59924050 None:intergenic 15.0%
!!! TGTTGTTATTCTATTTAATT+AGG + chr2_2:59925180-59925199 Msa0261480:intron 15.0%
!! GCAAAAAGAAAATAAAAATT+AGG + chr2_2:59925529-59925548 Msa0261480:intron 15.0%
!!! CAAGTTATTATAATTTGTTT+AGG - chr2_2:59926579-59926598 None:intergenic 15.0%
!! ACAAGTTAAAATAGTTAAAA+AGG + chr2_2:59926678-59926697 Msa0261480:intron 15.0%
!! TAATAAGATTAGATGAATAT+TGG + chr2_2:59926817-59926836 Msa0261480:intron 15.0%
!! AATTTCTTCAACAAAATTGA+AGG + chr2_2:59921892-59921911 Msa0261480:CDS 20.0%
!!! AAATGTTGATTTCTTTAGTT+GGG - chr2_2:59921980-59921999 None:intergenic 20.0%
!!! TTTATGAGATGTATTTTACA+TGG + chr2_2:59922213-59922232 Msa0261480:intron 20.0%
!!! TCTTTTTAAACTTTTATTCG+TGG + chr2_2:59922243-59922262 Msa0261480:intron 20.0%
!!! TATATGAGATTAAGCTTTTT+AGG - chr2_2:59922502-59922521 None:intergenic 20.0%
!! AAAACATATGAGATTTCATT+TGG + chr2_2:59922523-59922542 Msa0261480:intron 20.0%
!! AAACATATGAGATTTCATTT+GGG + chr2_2:59922524-59922543 Msa0261480:intron 20.0%
!! CTTGACAAAAAAAACATAAA+AGG - chr2_2:59922559-59922578 None:intergenic 20.0%
!! GTGTAACTTATAATTTAATC+AGG + chr2_2:59922663-59922682 Msa0261480:intron 20.0%
!! AGAACATTCAAATAACTAAA+AGG - chr2_2:59922737-59922756 None:intergenic 20.0%
!! ACTTAACAGTTAGTATTATA+TGG - chr2_2:59922892-59922911 None:intergenic 20.0%
!!! TTTGTTGAATATTTGACTTA+AGG + chr2_2:59923087-59923106 Msa0261480:intron 20.0%
!!! TTGTTGAATATTTGACTTAA+GGG + chr2_2:59923088-59923107 Msa0261480:intron 20.0%
!!! TAAAATGAAGTCTTGTTAAT+AGG + chr2_2:59923145-59923164 Msa0261480:intron 20.0%
!! ATTAAAATGAATACTTCATC+CGG + chr2_2:59923228-59923247 Msa0261480:intron 20.0%
!! TAAAACAAAATAATCTACCT+TGG - chr2_2:59923535-59923554 None:intergenic 20.0%
!! CTATGTACAAATTAATCAAT+TGG - chr2_2:59924032-59924051 None:intergenic 20.0%
!! GTAAAGTTTGTAATATCAAA+CGG + chr2_2:59924077-59924096 Msa0261480:intron 20.0%
!!! TTTACTTGATTAGTTCAAAA+AGG + chr2_2:59924229-59924248 Msa0261480:intron 20.0%
!!! TTGTTGATAGTACATTTAAT+TGG + chr2_2:59924373-59924392 Msa0261480:intron 20.0%
!!! TAAATTTGATAATGTGAAGT+TGG + chr2_2:59924464-59924483 Msa0261480:intron 20.0%
!! AAACCTTCATATATAACATA+TGG - chr2_2:59924617-59924636 None:intergenic 20.0%
!!! TATTTAATTAGGTGATTTGT+TGG + chr2_2:59925191-59925210 Msa0261480:intron 20.0%
!!! TCTTAGCATTTTAAGAAAAA+AGG - chr2_2:59925406-59925425 None:intergenic 20.0%
!! ATATTAATAGTGAAAACATG+TGG - chr2_2:59926107-59926126 None:intergenic 20.0%
!!! TGGCTTTTAAAAAAAATCAT+TGG + chr2_2:59926837-59926856 Msa0261480:intron 20.0%
! AACATGCTAAACATAATATC+AGG + chr2_2:59921846-59921865 Msa0261480:CDS 25.0%
!!! TGTTGAAGAAATTTTGTTGT+TGG - chr2_2:59921885-59921904 None:intergenic 25.0%
!!! GAAATGTTGATTTCTTTAGT+TGG - chr2_2:59921981-59922000 None:intergenic 25.0%
! TCAACATTTCATTTATGCAA+AGG + chr2_2:59921991-59922010 Msa0261480:intron 25.0%
! GTAGAGATTTGTGTATATAT+AGG + chr2_2:59922133-59922152 Msa0261480:intron 25.0%
! CAGGCAATATATAAGAATAT+TGG + chr2_2:59922347-59922366 Msa0261480:intron 25.0%
! CTCTACTTTAATTATGTTCA+AGG - chr2_2:59922443-59922462 None:intergenic 25.0%
! TGAACATAATTAAAGTAGAG+AGG + chr2_2:59922443-59922462 Msa0261480:intron 25.0%
! ATTCCTATAAAATGGTATCT+TGG + chr2_2:59922930-59922949 Msa0261480:intron 25.0%
!! AATCCAAGATACCATTTTAT+AGG - chr2_2:59922936-59922955 None:intergenic 25.0%
!! TGTTGAATATTTGACTTAAG+GGG + chr2_2:59923089-59923108 Msa0261480:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr2_2:59923285-59923304 None:intergenic 25.0%
!! AGTAGATGATAAGTATTGTT+TGG - chr2_2:59923717-59923736 None:intergenic 25.0%
!! ATTTGTTGCTACCAAATTTA+AGG + chr2_2:59923940-59923959 Msa0261480:CDS 25.0%
!! CAAGTTGTGATAAGTTTTTA+TGG - chr2_2:59924204-59924223 None:intergenic 25.0%
!! AAGAGTTAATTTGGTATCAT+TGG - chr2_2:59924544-59924563 None:intergenic 25.0%
!! ACATGATTGTGTAAATTTTG+TGG - chr2_2:59925491-59925510 None:intergenic 25.0%
!! TTATTTTCTTTTTGCTGCAT+GGG - chr2_2:59925524-59925543 None:intergenic 25.0%
!!! TTTATTTTCTTTTTGCTGCA+TGG - chr2_2:59925525-59925544 None:intergenic 25.0%
! TTCATTAACTGAAAAGGTTA+AGG - chr2_2:59925654-59925673 None:intergenic 25.0%
! TCTTCATTCATTAACTGAAA+AGG - chr2_2:59925660-59925679 None:intergenic 25.0%
! TTTCAGTTAATGAATGAAGA+AGG + chr2_2:59925660-59925679 Msa0261480:intron 25.0%
!!! ATTTTATTTAGACTCGTGTT+TGG - chr2_2:59925821-59925840 None:intergenic 25.0%
! AACTAATTAACAACAGTGTT+GGG + chr2_2:59925851-59925870 Msa0261480:intron 25.0%
!!! TTCGTAACTTTTGAAGAATT+CGG - chr2_2:59926207-59926226 None:intergenic 25.0%
! TCATATAGATTTCTGTACAA+AGG - chr2_2:59926322-59926341 None:intergenic 25.0%
! TCTATATGATGTTAAAAGCT+AGG + chr2_2:59926333-59926352 Msa0261480:intron 25.0%
!! TTTGAGATGCTAAAGTTAAT+AGG - chr2_2:59927006-59927025 None:intergenic 25.0%
! TTCTAATTCTAGACAACAAA+AGG + chr2_2:59927345-59927364 Msa0261480:CDS 25.0%
! AATCATGCCTTTTATTGCTT+TGG + chr2_2:59922071-59922090 Msa0261480:intron 30.0%
TCATGATCCAAAGCAATAAA+AGG - chr2_2:59922081-59922100 None:intergenic 30.0%
ACTTCACGTATTCATCTTAA+AGG - chr2_2:59922603-59922622 None:intergenic 30.0%
ACACATTGCATAATATATGC+TGG - chr2_2:59922647-59922666 None:intergenic 30.0%
AGCATCAAAAAACTTAAGAC+GGG - chr2_2:59922690-59922709 None:intergenic 30.0%
GAGCATCAAAAAACTTAAGA+CGG - chr2_2:59922691-59922710 None:intergenic 30.0%
!!! CTTAAGTTTTTTGATGCTCT+TGG + chr2_2:59922692-59922711 Msa0261480:intron 30.0%
!!! GATATTATATTTTGGCCTAG+AGG - chr2_2:59922977-59922996 None:intergenic 30.0%
! GTTGAATATTTGACTTAAGG+GGG + chr2_2:59923090-59923109 Msa0261480:intron 30.0%
! CTTTTGCTTATAATAGTGAC+CGG - chr2_2:59923250-59923269 None:intergenic 30.0%
!! AGTTAAAAAAGTACTTCCTC+CGG - chr2_2:59923380-59923399 None:intergenic 30.0%
!! TTTTAGGCACGTTTAAGATA+AGG + chr2_2:59923464-59923483 Msa0261480:intron 30.0%
AACCATTAAAGTGAGTTAGA+CGG + chr2_2:59923487-59923506 Msa0261480:intron 30.0%
! ATAAGTAACACACTTGGTTT+TGG - chr2_2:59923597-59923616 None:intergenic 30.0%
! GATGGTCGATCTTATTTATA+TGG - chr2_2:59923649-59923668 None:intergenic 30.0%
CTTCTTCTCATCCTTAAATT+TGG - chr2_2:59923954-59923973 None:intergenic 30.0%
CAAATTTAAGGATGAGAAGA+AGG + chr2_2:59923952-59923971 Msa0261480:CDS 30.0%
AACGGCAATATTATTCAATG+AGG + chr2_2:59924095-59924114 Msa0261480:intron 30.0%
! TACCTGATCAGTATTGAATT+TGG + chr2_2:59924155-59924174 Msa0261480:intron 30.0%
TACCAAATTCAATACTGATC+AGG - chr2_2:59924160-59924179 None:intergenic 30.0%
! TTAGTTCAAAAAGGTCGTTT+TGG + chr2_2:59924238-59924257 Msa0261480:intron 30.0%
TCTAAGAATGACATGTAATG+AGG - chr2_2:59924415-59924434 None:intergenic 30.0%
TGATACCAAATTAACTCTTG+AGG + chr2_2:59924545-59924564 Msa0261480:intron 30.0%
CCACTAAAAATAAATTCAGC+TGG - chr2_2:59924594-59924613 None:intergenic 30.0%
!!! CCAGCTGAATTTATTTTTAG+TGG + chr2_2:59924591-59924610 Msa0261480:intron 30.0%
TGGCCATATGTTATATATGA+AGG + chr2_2:59924611-59924630 Msa0261480:intron 30.0%
AAAAACAAAAAAGAGCAGCA+AGG + chr2_2:59924658-59924677 Msa0261480:intron 30.0%
AAAACAAAAAAGAGCAGCAA+GGG + chr2_2:59924659-59924678 Msa0261480:intron 30.0%
GAAAAGAAAACTAAAGCGTA+GGG + chr2_2:59924681-59924700 Msa0261480:intron 30.0%
GATGACTTCATGACAAAATT+AGG - chr2_2:59924797-59924816 None:intergenic 30.0%
TTCCTTCTTTGATTGTATGA+TGG + chr2_2:59924825-59924844 Msa0261480:intron 30.0%
!! TATGATGGACAAAGTAGTTT+CGG + chr2_2:59924840-59924859 Msa0261480:intron 30.0%
! TGCAATATGTCATTTGAATG+AGG + chr2_2:59925034-59925053 Msa0261480:intron 30.0%
! GCAATATGTCATTTGAATGA+GGG + chr2_2:59925035-59925054 Msa0261480:intron 30.0%
TCACAACCTTTGTAACATAA+GGG - chr2_2:59925380-59925399 None:intergenic 30.0%
ACTGCATTTAAACACATCAA+AGG + chr2_2:59925554-59925573 Msa0261480:intron 30.0%
AGGTTAAGGTTTAGATGTAT+TGG - chr2_2:59925640-59925659 None:intergenic 30.0%
GAACTAATTAACAACAGTGT+TGG + chr2_2:59925850-59925869 Msa0261480:intron 30.0%
! TGAGAGGATTTTCAATCATA+AGG - chr2_2:59926292-59926311 None:intergenic 30.0%
! AAAAGCTAGGCGATAATTTT+TGG + chr2_2:59926346-59926365 Msa0261480:intron 30.0%
ACATTTCATCACAGTAACAA+CGG - chr2_2:59926419-59926438 None:intergenic 30.0%
!!! TGACTTTGGAGTCATATTTT+TGG - chr2_2:59926458-59926477 None:intergenic 30.0%
!! AGTTTTATGATTGTTGCAAG+AGG + chr2_2:59926629-59926648 Msa0261480:intron 30.0%
!! GTTAGTTGTTTTCTAGACTA+TGG - chr2_2:59926933-59926952 None:intergenic 30.0%
TGAAGGAGGTTGTTATATAT+AGG - chr2_2:59927033-59927052 None:intergenic 30.0%
!!! ATGTATCTTGTGTTTTTGGT+TGG - chr2_2:59927070-59927089 None:intergenic 30.0%
! GTGTATGTATCTTGTGTTTT+TGG - chr2_2:59927074-59927093 None:intergenic 30.0%
!! GTGATTTTGAACTGACTTTA+GGG - chr2_2:59927260-59927279 None:intergenic 30.0%
! TGTCTAGAATTAGAAACCAT+AGG - chr2_2:59927340-59927359 None:intergenic 30.0%
! AAGTTATGTACTTGAGTTGT+TGG + chr2_2:59927395-59927414 Msa0261480:CDS 30.0%
! AGTTATGTACTTGAGTTGTT+GGG + chr2_2:59927396-59927415 Msa0261480:CDS 30.0%
! TGATCAAAAGCTTGCTTGAT+TGG - chr2_2:59922022-59922041 None:intergenic 35.0%
! TATTGCTTTGGATCATGAAG+TGG + chr2_2:59922083-59922102 Msa0261480:intron 35.0%
! GAAGTGATCAACTTTTGCAT+GGG + chr2_2:59922111-59922130 Msa0261480:intron 35.0%
AAGTGTTCACAGTTCAAATC+CGG + chr2_2:59922619-59922638 Msa0261480:intron 35.0%
TGCATAATATATGCTGGATC+CGG - chr2_2:59922641-59922660 None:intergenic 35.0%
!!! TTATATTTTGGCCTAGAGGA+TGG - chr2_2:59922973-59922992 None:intergenic 35.0%
CCTTTGCTTATAATAGTGAC+CGG + chr2_2:59923358-59923377 Msa0261480:intron 35.0%
AGCTAGATAAGTAACACACT+TGG - chr2_2:59923603-59923622 None:intergenic 35.0%
TTACTTATCTAGCTAGCTCA+TGG + chr2_2:59923609-59923628 Msa0261480:intron 35.0%
GTTGATTGATGAATGAAGAG+AGG - chr2_2:59923675-59923694 None:intergenic 35.0%
! GTTGCACGATTCATGATTTT+TGG - chr2_2:59923755-59923774 None:intergenic 35.0%
! CTGATCTAACACGGTTTTTA+AGG - chr2_2:59923889-59923908 None:intergenic 35.0%
CTTGAGAAACTGATCTAACA+CGG - chr2_2:59923898-59923917 None:intergenic 35.0%
CACTGAGAAACATAGATATG+TGG - chr2_2:59924133-59924152 None:intergenic 35.0%
AATTCAGATGAAGATCGTGT+TGG + chr2_2:59924300-59924319 Msa0261480:intron 35.0%
GAATGTTCCTTAAAGTGTGT+TGG + chr2_2:59924492-59924511 Msa0261480:intron 35.0%
CACATCCTCAAGAGTTAATT+TGG - chr2_2:59924553-59924572 None:intergenic 35.0%
GGAAAAGAAAACTAAAGCGT+AGG + chr2_2:59924680-59924699 Msa0261480:intron 35.0%
TTGTCATGAAGTCATCACTA+TGG + chr2_2:59924801-59924820 Msa0261480:intron 35.0%
GTCCATCATACAATCAAAGA+AGG - chr2_2:59924830-59924849 None:intergenic 35.0%
!! ATGATGGACAAAGTAGTTTC+GGG + chr2_2:59924841-59924860 Msa0261480:intron 35.0%
CTCTCAATCAATCTCATCTT+GGG - chr2_2:59924929-59924948 None:intergenic 35.0%
TCTCTCAATCAATCTCATCT+TGG - chr2_2:59924930-59924949 None:intergenic 35.0%
AGATGAGATTGATTGAGAGA+AGG + chr2_2:59924930-59924949 Msa0261480:intron 35.0%
GATGAGATTGATTGAGAGAA+GGG + chr2_2:59924931-59924950 Msa0261480:intron 35.0%
TGTTCCATTCTCAATGTTGA+TGG - chr2_2:59925152-59925171 None:intergenic 35.0%
CTCACAACCTTTGTAACATA+AGG - chr2_2:59925381-59925400 None:intergenic 35.0%
TTGATTGTGATTGTCTCACT+TGG - chr2_2:59925589-59925608 None:intergenic 35.0%
CACATAATTCGTGTGATTTG+AGG + chr2_2:59925687-59925706 Msa0261480:intron 35.0%
TTATTTAGACTCGTGTTTGG+TGG - chr2_2:59925818-59925837 None:intergenic 35.0%
AATTATCTCTTCCCAACAGT+GGG - chr2_2:59925896-59925915 None:intergenic 35.0%
TAATTATCTCTTCCCAACAG+TGG - chr2_2:59925897-59925916 None:intergenic 35.0%
GGAAGAGATAATTAAATCCC+TGG + chr2_2:59925903-59925922 Msa0261480:intron 35.0%
GACAATTCTTGCATATGGAA+AGG - chr2_2:59926015-59926034 None:intergenic 35.0%
!!! GTTTTTTGATAGTCCCACAT+CGG - chr2_2:59926037-59926056 None:intergenic 35.0%
!! TTTTGAAGAATTCGGTACGT+GGG - chr2_2:59926199-59926218 None:intergenic 35.0%
TAGATTTCTGTACAAAGGAG+AGG - chr2_2:59926317-59926336 None:intergenic 35.0%
ATCATCTCCTTCAGTTTGAT+GGG - chr2_2:59926385-59926404 None:intergenic 35.0%
!!! AGTCATATTTTTGGCTGGTT+AGG - chr2_2:59926449-59926468 None:intergenic 35.0%
!!! TTTGGAGTCATATTTTTGGC+TGG - chr2_2:59926454-59926473 None:intergenic 35.0%
GACTTTATTACAGGTGACTT+TGG - chr2_2:59926472-59926491 None:intergenic 35.0%
TTTCAACGCGACTTTATTAC+AGG - chr2_2:59926481-59926500 None:intergenic 35.0%
TTTCAAACAACGACATTCAG+TGG + chr2_2:59926519-59926538 Msa0261480:intron 35.0%
TATATAGAAGACAGTGACAG+TGG - chr2_2:59926793-59926812 None:intergenic 35.0%
AAAGAATAGGAAAATACCGG+GGG - chr2_2:59926969-59926988 None:intergenic 35.0%
CAAAGAATAGGAAAATACCG+GGG - chr2_2:59926970-59926989 None:intergenic 35.0%
CCAAAGAATAGGAAAATACC+GGG - chr2_2:59926971-59926990 None:intergenic 35.0%
CCCAAAGAATAGGAAAATAC+CGG - chr2_2:59926972-59926991 None:intergenic 35.0%
! CCGGTATTTTCCTATTCTTT+GGG + chr2_2:59926969-59926988 Msa0261480:intron 35.0%
AAGATCAAGGAATATGCAGA+TGG + chr2_2:59927227-59927246 Msa0261480:CDS 35.0%
!! TTTGAACTGACTTTAGGGTA+TGG - chr2_2:59927255-59927274 None:intergenic 35.0%
!! CGTGATTTTGAACTGACTTT+AGG - chr2_2:59927261-59927280 None:intergenic 35.0%
TTCATCTTCTTCTTCTCCTA+TGG + chr2_2:59927321-59927340 Msa0261480:CDS 35.0%
AGCAATCAGAGGAATCTTTA+AGG + chr2_2:59927371-59927390 Msa0261480:CDS 35.0%
! GTTATGTACTTGAGTTGTTG+GGG + chr2_2:59927397-59927416 Msa0261480:CDS 35.0%
AGGATCAAGGAATATGCAGA+TGG + chr2_2:59921798-59921817 Msa0261480:CDS 40.0%
GGATGAGAAATCCAAACAGT+CGG + chr2_2:59921913-59921932 Msa0261480:CDS 40.0%
TTTGGATCATGAAGTGGTCT+TGG + chr2_2:59922089-59922108 Msa0261480:intron 40.0%
! GGAAGTGATCAACTTTTGCA+TGG + chr2_2:59922110-59922129 Msa0261480:intron 40.0%
CCGGTCACTATTATAAGCAA+AGG - chr2_2:59923247-59923266 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr2_2:59923361-59923380 Msa0261480:intron 40.0%
CTCCGTCTAACTCACTTTAA+TGG - chr2_2:59923492-59923511 None:intergenic 40.0%
AAACCATAGGCTATGTCTAC+CGG - chr2_2:59923572-59923591 None:intergenic 40.0%
!!! CTTGGTTTTGGAGAAACCAT+AGG - chr2_2:59923585-59923604 None:intergenic 40.0%
ATGAATGAAGAGAGGAGTGA+TGG - chr2_2:59923667-59923686 None:intergenic 40.0%
ATAGTTCCACCTACAGATAC+CGG - chr2_2:59923843-59923862 None:intergenic 40.0%
!! AAGGTCGTTTTGGTGAAAGA+AGG + chr2_2:59924248-59924267 Msa0261480:intron 40.0%
!! TCCTTAAAGTGTGTTGGCTT+TGG + chr2_2:59924498-59924517 Msa0261480:intron 40.0%
TCCAAAGCCAACACACTTTA+AGG - chr2_2:59924502-59924521 None:intergenic 40.0%
!! TGGCTTTGGAGAGGTTAATT+TGG + chr2_2:59924512-59924531 Msa0261480:intron 40.0%
GATGACAAACAGATCATCTG+CGG + chr2_2:59924766-59924785 Msa0261480:intron 40.0%
TCAGGACATCAAAGACCTTA+TGG - chr2_2:59924870-59924889 None:intergenic 40.0%
CATTTACGCTGTTCTTGTTC+AGG - chr2_2:59924888-59924907 None:intergenic 40.0%
GAACAAGAACAGCGTAAATG+TGG + chr2_2:59924888-59924907 Msa0261480:intron 40.0%
!! TACCCATGTTGATAGCCATA+TGG + chr2_2:59924981-59925000 Msa0261480:intron 40.0%
CACCATATGGCTATCAACAT+GGG - chr2_2:59924986-59925005 None:intergenic 40.0%
TGCATATGCATGTATCTCAC+AGG - chr2_2:59925076-59925095 None:intergenic 40.0%
! AATGTTGATGGAGCTGCAAT+GGG - chr2_2:59925140-59925159 None:intergenic 40.0%
AGCTCCATCAACATTGAGAA+TGG + chr2_2:59925145-59925164 Msa0261480:intron 40.0%
GTAACCAAGTCTCGTTGTTA+AGG + chr2_2:59925291-59925310 Msa0261480:intron 40.0%
CTTTGTAACATAAGGGCTCT+TGG - chr2_2:59925373-59925392 None:intergenic 40.0%
CAAGAGCCCTTATGTTACAA+AGG + chr2_2:59925371-59925390 Msa0261480:intron 40.0%
TTCTCTGATACACATTGTGC+TGG - chr2_2:59925458-59925477 None:intergenic 40.0%
ATTGTGATTGTCTCACTTGG+AGG - chr2_2:59925586-59925605 None:intergenic 40.0%
GTTGGGTAGTGATAAATCAC+TGG + chr2_2:59925868-59925887 Msa0261480:intron 40.0%
ATTATCTCTTCCCAACAGTG+GGG - chr2_2:59925895-59925914 None:intergenic 40.0%
TGCATATGGAAAGGAAGAAG+TGG - chr2_2:59926006-59926025 None:intergenic 40.0%
CATCGGACAATTCTTGCATA+TGG - chr2_2:59926020-59926039 None:intergenic 40.0%
TATGCAAGAATTGTCCGATG+TGG + chr2_2:59926020-59926039 Msa0261480:intron 40.0%
ATGCAAGAATTGTCCGATGT+GGG + chr2_2:59926021-59926040 Msa0261480:intron 40.0%
ATACTTAGTCGGTACGCTAT+GGG - chr2_2:59926172-59926191 None:intergenic 40.0%
TATACTTAGTCGGTACGCTA+TGG - chr2_2:59926173-59926192 None:intergenic 40.0%
TTTGAAGAATTCGGTACGTG+GGG - chr2_2:59926198-59926217 None:intergenic 40.0%
!! CTTTTGAAGAATTCGGTACG+TGG - chr2_2:59926200-59926219 None:intergenic 40.0%
AATTGCGAACCATGTGACTA+TGG + chr2_2:59926261-59926280 Msa0261480:intron 40.0%
ATTGCGAACCATGTGACTAT+GGG + chr2_2:59926262-59926281 Msa0261480:intron 40.0%
GATCATCTCCTTCAGTTTGA+TGG - chr2_2:59926386-59926405 None:intergenic 40.0%
CAGTAACAACGGTAACATTC+TGG - chr2_2:59926408-59926427 None:intergenic 40.0%
! CGAAGTGTTCACAGTTTACA+TGG + chr2_2:59926654-59926673 Msa0261480:intron 40.0%
AAGAATAGGAAAATACCGGG+GGG - chr2_2:59926968-59926987 None:intergenic 40.0%
! CCCGGTATTTTCCTATTCTT+TGG + chr2_2:59926968-59926987 Msa0261480:intron 40.0%
TGATGAAACGCCCAAAGAAT+AGG - chr2_2:59926982-59927001 None:intergenic 40.0%
TTGATGAAGAAGAGTGAAGG+AGG - chr2_2:59927047-59927066 None:intergenic 40.0%
!! TGGTTGATGAAGAAGAGTGA+AGG - chr2_2:59927050-59927069 None:intergenic 40.0%
!! GTGGAAGCATTGAAAGATCA+AGG + chr2_2:59927214-59927233 Msa0261480:CDS 40.0%
ACAAAAGGCAAAGCAATCAG+AGG + chr2_2:59927360-59927379 Msa0261480:CDS 40.0%
TGAGAAATCCAAACAGTCGG+AGG + chr2_2:59921916-59921935 Msa0261480:CDS 45.0%
CAAAGATTCCTCCGACTGTT+TGG - chr2_2:59921927-59921946 None:intergenic 45.0%
TGTCATGTTCTTGAGCTGCT+GGG + chr2_2:59921952-59921971 Msa0261480:CDS 45.0%
!! CAAGCGTTGAAGACGAAACT+TGG + chr2_2:59922324-59922343 Msa0261480:intron 45.0%
!! ATTTTGGCCTAGAGGATGGA+TGG - chr2_2:59922969-59922988 None:intergenic 45.0%
GTTAGACGGAGTGAACGTAA+TGG + chr2_2:59923501-59923520 Msa0261480:intron 45.0%
GGAGTGAACGTAATGGCAAA+TGG + chr2_2:59923508-59923527 Msa0261480:intron 45.0%
ACGTAATGGCAAATGGTCCA+AGG + chr2_2:59923515-59923534 Msa0261480:intron 45.0%
!!! TAGGCTATGTCTACCGGTTT+TGG - chr2_2:59923566-59923585 None:intergenic 45.0%
AAACCGGTAGACATAGCCTA+TGG + chr2_2:59923566-59923585 Msa0261480:intron 45.0%
CAACAGCAACAAGCAAAGCA+TGG + chr2_2:59923771-59923790 Msa0261480:intron 45.0%
AGCAACAAGCAAAGCATGGA+TGG + chr2_2:59923775-59923794 Msa0261480:intron 45.0%
AACAAGCAAAGCATGGATGG+TGG + chr2_2:59923778-59923797 Msa0261480:CDS 45.0%
!! GAGGCTTTGAAAGATCAAGC+CGG + chr2_2:59923821-59923840 Msa0261480:CDS 45.0%
AAGATCAAGCCGGTATCTGT+AGG + chr2_2:59923831-59923850 Msa0261480:CDS 45.0%
TGTCATGTACTTGAGCTGCT+GGG + chr2_2:59924003-59924022 Msa0261480:intron 45.0%
!! AAAGTGTGTTGGCTTTGGAG+AGG + chr2_2:59924503-59924522 Msa0261480:intron 45.0%
! TCTTCTCAGGATGGATTCGA+TGG - chr2_2:59924717-59924736 None:intergenic 45.0%
ATCGAATCCATCCTGAGAAG+AGG + chr2_2:59924716-59924735 Msa0261480:intron 45.0%
AATCCATCCTGAGAAGAGGA+AGG + chr2_2:59924720-59924739 Msa0261480:intron 45.0%
TGTCATCCATTCTTCTCCAC+CGG - chr2_2:59924753-59924772 None:intergenic 45.0%
! AGTAGTTTCGGGTAGCCATA+AGG + chr2_2:59924852-59924871 Msa0261480:intron 45.0%
ACAGCGTAAATGTGGTACTG+CGG + chr2_2:59924896-59924915 Msa0261480:intron 45.0%
CCACCATATGGCTATCAACA+TGG - chr2_2:59924987-59925006 None:intergenic 45.0%
!! CCATGTTGATAGCCATATGG+TGG + chr2_2:59924984-59925003 Msa0261480:intron 45.0%
GTACACCATCAAAACCTGCT+CGG + chr2_2:59925106-59925125 Msa0261480:intron 45.0%
! ATGTTGATGGAGCTGCAATG+GGG - chr2_2:59925139-59925158 None:intergenic 45.0%
! CAATGTTGATGGAGCTGCAA+TGG - chr2_2:59925141-59925160 None:intergenic 45.0%
TCTCTCGTGTTGAAAGCTCA+AGG + chr2_2:59925223-59925242 Msa0261480:intron 45.0%
TGTGCCTTAACAACGAGACT+TGG - chr2_2:59925298-59925317 None:intergenic 45.0%
GATATCTCTAAACCCACTCG+AGG + chr2_2:59925327-59925346 Msa0261480:intron 45.0%
TGGTGGAATATCTTCCTTGC+CGG - chr2_2:59925353-59925372 None:intergenic 45.0%
TGTAACATAAGGGCTCTTGG+TGG - chr2_2:59925370-59925389 None:intergenic 45.0%
TGATACACATTGTGCTGGAG+GGG - chr2_2:59925453-59925472 None:intergenic 45.0%
CTGATACACATTGTGCTGGA+GGG - chr2_2:59925454-59925473 None:intergenic 45.0%
TCTGATACACATTGTGCTGG+AGG - chr2_2:59925455-59925474 None:intergenic 45.0%
! TTTTTGCTGCATGGGCAACA+TGG - chr2_2:59925516-59925535 None:intergenic 45.0%
! CCCAGTTCTGACGAATTCTT+GGG - chr2_2:59925779-59925798 None:intergenic 45.0%
CCCAAGAATTCGTCAGAACT+GGG + chr2_2:59925776-59925795 Msa0261480:intron 45.0%
! TCCCAGTTCTGACGAATTCT+TGG - chr2_2:59925780-59925799 None:intergenic 45.0%
!!! GTTTGGTGGTGTGGTTTTTG+CGG - chr2_2:59925804-59925823 None:intergenic 45.0%
TTGAAGAATTCGGTACGTGG+GGG - chr2_2:59926197-59926216 None:intergenic 45.0%
AAGGTTGACCCATAGTCACA+TGG - chr2_2:59926273-59926292 None:intergenic 45.0%
GTACAAAGGAGAGGAATGAG+AGG - chr2_2:59926308-59926327 None:intergenic 45.0%
TGAGTTCAACAAGCAGAGCA+TGG + chr2_2:59927167-59927186 Msa0261480:intron 45.0%
GAGTTCAACAAGCAGAGCAT+GGG + chr2_2:59927168-59927187 Msa0261480:intron 45.0%
TGAGTTCAAGAAGCCGAGCA+TGG + chr2_2:59921732-59921751 Msa0261480:CDS 50.0%
TGGAGTGTGGCAACAAGTGT+TGG + chr2_2:59921758-59921777 Msa0261480:CDS 50.0%
!! TGTGGCAACAAGTGTTGGAG+TGG + chr2_2:59921763-59921782 Msa0261480:CDS 50.0%
!! AACAAGTGTTGGAGTGGTGG+AGG + chr2_2:59921769-59921788 Msa0261480:CDS 50.0%
!! GTGGAGGCATTGAAGGATCA+AGG + chr2_2:59921785-59921804 Msa0261480:CDS 50.0%
CTGTCATGTTCTTGAGCTGC+TGG + chr2_2:59921951-59921970 Msa0261480:CDS 50.0%
GTCATGTTCTTGAGCTGCTG+GGG + chr2_2:59921953-59921972 Msa0261480:CDS 50.0%
CGTTGAAGACGAAACTTGGC+AGG + chr2_2:59922328-59922347 Msa0261480:intron 50.0%
!! TGCAAGTGTTGGAGTTGTGG+AGG + chr2_2:59923802-59923821 Msa0261480:CDS 50.0%
ATCAAGCCGGTATCTGTAGG+TGG + chr2_2:59923834-59923853 Msa0261480:CDS 50.0%
GGATGAGAAGAAGGCCAAAC+AGG + chr2_2:59923961-59923980 Msa0261480:CDS 50.0%
CAAAGACTCCTCTGCCTGTT+TGG - chr2_2:59923978-59923997 None:intergenic 50.0%
AACAGGCAGAGGAGTCTTTG+AGG + chr2_2:59923978-59923997 Msa0261480:CDS 50.0%
CTGTCATGTACTTGAGCTGC+TGG + chr2_2:59924002-59924021 Msa0261480:intron 50.0%
GTCATGTACTTGAGCTGCTG+GGG + chr2_2:59924004-59924023 Msa0261480:intron 50.0%
TTGACCTCCTTCCTCTTCTC+AGG - chr2_2:59924730-59924749 None:intergenic 50.0%
AGAAGAGGAAGGAGGTCAAC+CGG + chr2_2:59924731-59924750 Msa0261480:intron 50.0%
GAGCTCACAACTACTCACTG+CGG - chr2_2:59925010-59925029 None:intergenic 50.0%
!! CCAATCCGAGCAGGTTTTGA+TGG - chr2_2:59925114-59925133 None:intergenic 50.0%
CCATCAAAACCTGCTCGGAT+TGG + chr2_2:59925111-59925130 Msa0261480:intron 50.0%
CTCGTGTTGAAAGCTCAAGG+TGG + chr2_2:59925226-59925245 Msa0261480:intron 50.0%
GTGTTGAAAGCTCAAGGTGG+TGG + chr2_2:59925229-59925248 Msa0261480:intron 50.0%
! ATTTGAGGTGAACCGCGAAC+TGG + chr2_2:59925702-59925721 Msa0261480:intron 50.0%
TTGGGCGAATTGTAGCGAAC+CGG - chr2_2:59925761-59925780 None:intergenic 50.0%
GCCCAAGAATTCGTCAGAAC+TGG + chr2_2:59925775-59925794 Msa0261480:intron 50.0%
!! TAGACTCGTGTTTGGTGGTG+TGG - chr2_2:59925813-59925832 None:intergenic 50.0%
AAATCACTGGTCCCCACTGT+TGG + chr2_2:59925881-59925900 Msa0261480:intron 50.0%
AATCACTGGTCCCCACTGTT+GGG + chr2_2:59925882-59925901 Msa0261480:intron 50.0%
! ATGGTTACTTGGTGGGACCA+GGG - chr2_2:59925923-59925942 None:intergenic 50.0%
TCCCACCAAGTAACCATGCT+AGG + chr2_2:59925926-59925945 Msa0261480:intron 50.0%
GCCTAGCATGGTTACTTGGT+GGG - chr2_2:59925930-59925949 None:intergenic 50.0%
! ACGTGGGGGGTATACTTAGT+CGG - chr2_2:59926183-59926202 None:intergenic 50.0%
TGAAGAATTCGGTACGTGGG+GGG - chr2_2:59926196-59926215 None:intergenic 50.0%
ACATGGTTCGCAATTCGCTC+CGG - chr2_2:59926256-59926275 None:intergenic 50.0%
!! CTTCAGTTTGATGGGCTAGG+TGG - chr2_2:59926377-59926396 None:intergenic 50.0%
CACCTAGCCCATCAAACTGA+AGG + chr2_2:59926375-59926394 Msa0261480:intron 50.0%
!! CTCCTTCAGTTTGATGGGCT+AGG - chr2_2:59926380-59926399 None:intergenic 50.0%
AGACAGTGACAGTGGCAAGA+TGG - chr2_2:59926785-59926804 None:intergenic 50.0%
AACAATAGCTTTCAGCCCCC+CGG + chr2_2:59926950-59926969 Msa0261480:intron 50.0%
CAAGAAGCCGAGCATGGACA+TGG + chr2_2:59921738-59921757 Msa0261480:CDS 55.0%
CCACACTCCATGTCCATGCT+CGG - chr2_2:59921748-59921767 None:intergenic 55.0%
!! GGCAACAAGTGTTGGAGTGG+TGG + chr2_2:59921766-59921785 Msa0261480:CDS 55.0%
!! TGGAGTGGTGGAGGCATTGA+AGG + chr2_2:59921778-59921797 Msa0261480:CDS 55.0%
GTCGCTTCCATCCATCCTCT+AGG + chr2_2:59922959-59922978 Msa0261480:intron 55.0%
! TGGATGGTGGCTGCAAGTGT+TGG + chr2_2:59923791-59923810 Msa0261480:CDS 55.0%
!! GGCTGCAAGTGTTGGAGTTG+TGG + chr2_2:59923799-59923818 Msa0261480:CDS 55.0%
GAAGAAGGCCAAACAGGCAG+AGG + chr2_2:59923967-59923986 Msa0261480:CDS 55.0%
CCTCCTTCCTCTTCTCAGGA+TGG - chr2_2:59924726-59924745 None:intergenic 55.0%
CCATCCTGAGAAGAGGAAGG+AGG + chr2_2:59924723-59924742 Msa0261480:intron 55.0%
GGTCAACCGGTGGAGAAGAA+TGG + chr2_2:59924744-59924763 Msa0261480:intron 55.0%
TACTCACTGCGGCCACCATA+TGG - chr2_2:59924999-59925018 None:intergenic 55.0%
AATGGGGTTCCAATCCGAGC+AGG - chr2_2:59925123-59925142 None:intergenic 55.0%
TCTCTAAACCCACTCGAGGC+CGG + chr2_2:59925331-59925350 Msa0261480:intron 55.0%
GGTACGTACGAACCAGTTCG+CGG - chr2_2:59925717-59925736 None:intergenic 55.0%
!! GCGAACTGGTTCGTACGTAC+CGG + chr2_2:59925716-59925735 Msa0261480:intron 55.0%
!! TACTCCGAAGTACCGCGAAC+CGG - chr2_2:59925738-59925757 None:intergenic 55.0%
TTCGCGGTACTTCGGAGTAC+CGG + chr2_2:59925739-59925758 Msa0261480:intron 55.0%
! CATGGTTACTTGGTGGGACC+AGG - chr2_2:59925924-59925943 None:intergenic 55.0%
CGCCTAGCATGGTTACTTGG+TGG - chr2_2:59925931-59925950 None:intergenic 55.0%
ACGCGCCTAGCATGGTTACT+TGG - chr2_2:59925934-59925953 None:intergenic 55.0%
AAGTAACCATGCTAGGCGCG+TGG + chr2_2:59925933-59925952 Msa0261480:intron 55.0%
AGTAACCATGCTAGGCGCGT+GGG + chr2_2:59925934-59925953 Msa0261480:intron 55.0%
ATTCGCTCCGGTACGTGGTA+CGG - chr2_2:59926244-59926263 None:intergenic 55.0%
TGCAGGCAGTGTTGCAGTTG+TGG + chr2_2:59927195-59927214 Msa0261480:CDS 55.0%
CCGAGCATGGACATGGAGTG+TGG + chr2_2:59921745-59921764 Msa0261480:CDS 60.0%
AGAGGAAGGAGGTCAACCGG+TGG + chr2_2:59924734-59924753 Msa0261480:intron 60.0%
!! GGTTCGTACGTACCGGTTCG+CGG + chr2_2:59925723-59925742 Msa0261480:intron 60.0%
!! CGTACCGGTTCGCGGTACTT+CGG + chr2_2:59925731-59925750 Msa0261480:intron 60.0%
CAAAACCCACGCGCCTAGCA+TGG - chr2_2:59925942-59925961 None:intergenic 60.0%
! CATGCTAGGCGCGTGGGTTT+TGG + chr2_2:59925940-59925959 Msa0261480:intron 60.0%
TCCGGTACGTGGTACGGGTT+CGG - chr2_2:59926238-59926257 None:intergenic 60.0%
TTCGCTCCGGTACGTGGTAC+GGG - chr2_2:59926243-59926262 None:intergenic 60.0%
TCGCAATTCGCTCCGGTACG+TGG - chr2_2:59926249-59926268 None:intergenic 60.0%
AGCAGAGCATGGGTAGCTGC+AGG + chr2_2:59927178-59927197 Msa0261480:intron 60.0%
AAACCCACTCGAGGCCGGCA+AGG + chr2_2:59925336-59925355 Msa0261480:intron 65.0%
CTTCCTTGCCGGCCTCGAGT+GGG - chr2_2:59925342-59925361 None:intergenic 65.0%
TCTTCCTTGCCGGCCTCGAG+TGG - chr2_2:59925343-59925362 None:intergenic 65.0%
GTGGTACGGGTTCGGGTACG+CGG - chr2_2:59926230-59926249 None:intergenic 65.0%
CCGGTACGTGGTACGGGTTC+GGG - chr2_2:59926237-59926256 None:intergenic 65.0%
CCCGAACCCGTACCACGTAC+CGG + chr2_2:59926234-59926253 Msa0261480:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 59921731 59927429 59921731 ID=Msa0261480;Name=Msa0261480
chr2_2 mRNA 59921731 59927429 59921731 ID=Msa0261480-mRNA-1;Parent=Msa0261480;Name=Msa0261480-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|0|0|3|0|240
chr2_2 exon 59921731 59921974 59921731 ID=Msa0261480-mRNA-1:exon:18458;Parent=Msa0261480-mRNA-1
chr2_2 exon 59923777 59924008 59923777 ID=Msa0261480-mRNA-1:exon:18459;Parent=Msa0261480-mRNA-1
chr2_2 exon 59927183 59927429 59927183 ID=Msa0261480-mRNA-1:exon:18460;Parent=Msa0261480-mRNA-1
chr2_2 CDS 59921731 59921974 59921731 ID=Msa0261480-mRNA-1:cds;Parent=Msa0261480-mRNA-1
chr2_2 CDS 59923777 59924008 59923777 ID=Msa0261480-mRNA-1:cds;Parent=Msa0261480-mRNA-1
chr2_2 CDS 59927183 59927429 59927183 ID=Msa0261480-mRNA-1:cds;Parent=Msa0261480-mRNA-1
Gene Sequence

>Msa0261480

ATGAGTTCAAGAAGCCGAGCATGGACATGGAGTGTGGCAACAAGTGTTGGAGTGGTGGAGGCATTGAAGGATCAAGGAATATGCAGATGGAACAGTGTTATAAGATCAGCACAACAACATGCTAAACATAATATCAGGTCTCTGTCTCATGCCAACAACAAAATTTCTTCAACAAAATTGAAGGATGAGAAATCCAAACAGTCGGAGGAATCTTTGAGAACTGTCATGTTCTTGAGCTGCTGGGCAACAAGCAAAGCATGGATGGTGGCTGCAAGTGTTGGAGTTGTGGAGGCTTTGAAAGATCAAGCCGGTATCTGTAGGTGGAACTATGCTTTAAGACAAGCTCAACAACACCTTAAAAACCGTGTTAGATCAGTTTCTCAAGCAAAGAATTTCTCTTCTTCTTCATTTGTTGCTACCAAATTTAAGGATGAGAAGAAGGCCAAACAGGCAGAGGAGTCTTTGAGGACTGTCATAGCATGGGTAGCTGCAGGCAGTGTTGCAGTTGTGGAAGCATTGAAAGATCAAGGAATATGCAGATGGAACCATACCCTAAAGTCAGTTCAAAATCACGTGAAAAATAATGTCAGATCGTTTTCTCAAGCAAAGAAACTTTCATCTTCTTCTTCTCCTATGGTTTCTAATTCTAGACAACAAAAGGCAAAGCAATCAGAGGAATCTTTAAGGAAAGTTATGTACTTGAGTTGTTGGGGTCCCAACTAA

Protein sequence

>Msa0261480

MSSRSRAWTWSVATSVGVVEALKDQGICRWNSVIRSAQQHAKHNIRSLSHANNKISSTKLKDEKSKQSEESLRTVMFLSCWATSKAWMVAASVGVVEALKDQAGICRWNYALRQAQQHLKNRVRSVSQAKNFSSSSFVATKFKDEKKAKQAEESLRTVIAWVAAGSVAVVEALKDQGICRWNHTLKSVQNHVKNNVRSFSQAKKLSSSSSPMVSNSRQQKAKQSEESLRKVMYLSCWGPN*