Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401060 | XP_013443065.1 | 99.183 | 367 | 3 | 0 | 1 | 367 | 1 | 367 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401060 | A0A072TU53 | 99.183 | 367 | 3 | 0 | 1 | 367 | 1 | 367 | 0.0 | 746 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0401060 | 0.825193 | 5.355984e-54 | -8.615850e-47 |
| Msa0014770 | Msa0401060 | 0.815425 | 9.307090e-52 | -8.615850e-47 |
| Msa0015570 | Msa0401060 | 0.800536 | 1.376250e-48 | -8.615850e-47 |
| Msa0025160 | Msa0401060 | 0.825304 | 5.043342e-54 | -8.615850e-47 |
| Msa0030070 | Msa0401060 | 0.826835 | 2.181066e-54 | -8.615850e-47 |
| Msa0032130 | Msa0401060 | 0.813933 | 1.992068e-51 | -8.615850e-47 |
| Msa0032390 | Msa0401060 | 0.812601 | 3.904667e-51 | -8.615850e-47 |
| Msa0032980 | Msa0401060 | 0.814555 | 1.451590e-51 | -8.615850e-47 |
| Msa0038530 | Msa0401060 | 0.818954 | 1.497103e-52 | -8.615850e-47 |
| Msa0040200 | Msa0401060 | 0.815260 | 1.012805e-51 | -8.615850e-47 |
| Msa0045620 | Msa0401060 | 0.840260 | 9.677939e-58 | -8.615850e-47 |
| Msa0045810 | Msa0401060 | 0.809603 | 1.743706e-50 | -8.615850e-47 |
| Msa0050150 | Msa0401060 | 0.829505 | 4.957729e-55 | -8.615850e-47 |
| Msa0050530 | Msa0401060 | 0.834016 | 3.824975e-56 | -8.615850e-47 |
| Msa0063190 | Msa0401060 | 0.891291 | 4.542270e-74 | -8.615850e-47 |
| Msa0072520 | Msa0401060 | 0.848168 | 7.277630e-60 | -8.615850e-47 |
| Msa0078500 | Msa0401060 | 0.840241 | 9.790550e-58 | -8.615850e-47 |
| Msa0080370 | Msa0401060 | 0.846599 | 1.962695e-59 | -8.615850e-47 |
| Msa0080440 | Msa0401060 | 0.828818 | 7.277015e-55 | -8.615850e-47 |
| Msa0091350 | Msa0401060 | 0.842594 | 2.350342e-58 | -8.615850e-47 |
| Msa0093860 | Msa0401060 | 0.812720 | 3.677799e-51 | -8.615850e-47 |
| Msa0094180 | Msa0401060 | 0.805506 | 1.291514e-49 | -8.615850e-47 |
| Msa0100600 | Msa0401060 | 0.853866 | 1.799573e-61 | -8.615850e-47 |
| Msa0100890 | Msa0401060 | 0.837635 | 4.628119e-57 | -8.615850e-47 |
| Msa0106630 | Msa0401060 | 0.809479 | 1.853982e-50 | -8.615850e-47 |
| Msa0108630 | Msa0401060 | 0.903351 | 3.796674e-79 | -8.615850e-47 |
| Msa0125590 | Msa0401060 | 0.841356 | 4.993891e-58 | -8.615850e-47 |
| Msa0126210 | Msa0401060 | 0.843958 | 1.017249e-58 | -8.615850e-47 |
| Msa0127340 | Msa0401060 | 0.822743 | 2.012087e-53 | -8.615850e-47 |
| Msa0131810 | Msa0401060 | 0.834872 | 2.330973e-56 | -8.615850e-47 |
| Msa0132700 | Msa0401060 | 0.816796 | 4.596894e-52 | -8.615850e-47 |
| Msa0141750 | Msa0401060 | 0.800535 | 1.377068e-48 | -8.615850e-47 |
| Msa0153210 | Msa0401060 | 0.811622 | 6.386520e-51 | -8.615850e-47 |
| Msa0156090 | Msa0401060 | 0.801686 | 8.009880e-49 | -8.615850e-47 |
| Msa0165640 | Msa0401060 | 0.802780 | 4.768140e-49 | -8.615850e-47 |
| Msa0165830 | Msa0401060 | 0.805950 | 1.042402e-49 | -8.615850e-47 |
| Msa0168380 | Msa0401060 | 0.831834 | 1.333603e-55 | -8.615850e-47 |
| Msa0170070 | Msa0401060 | 0.811476 | 6.869357e-51 | -8.615850e-47 |
| Msa0173250 | Msa0401060 | 0.870737 | 1.163757e-66 | -8.615850e-47 |
| Msa0176060 | Msa0401060 | 0.811916 | 5.509448e-51 | -8.615850e-47 |
| Msa0183710 | Msa0401060 | 0.815001 | 1.155939e-51 | -8.615850e-47 |
| Msa0185690 | Msa0401060 | 0.818906 | 1.535276e-52 | -8.615850e-47 |
| Msa0186180 | Msa0401060 | 0.800268 | 1.560947e-48 | -8.615850e-47 |
| Msa0187040 | Msa0401060 | 0.810845 | 9.412261e-51 | -8.615850e-47 |
| Msa0203080 | Msa0401060 | 0.848966 | 4.376003e-60 | -8.615850e-47 |
| Msa0204970 | Msa0401060 | 0.823207 | 1.568487e-53 | -8.615850e-47 |
| Msa0205210 | Msa0401060 | 0.809113 | 2.221122e-50 | -8.615850e-47 |
| Msa0206370 | Msa0401060 | 0.859262 | 4.672130e-63 | -8.615850e-47 |
| Msa0218020 | Msa0401060 | 0.807167 | 5.768823e-50 | -8.615850e-47 |
| Msa0221180 | Msa0401060 | 0.814857 | 1.244564e-51 | -8.615850e-47 |
| Msa0225800 | Msa0401060 | 0.812409 | 4.302546e-51 | -8.615850e-47 |
| Msa0226640 | Msa0401060 | 0.803815 | 2.911774e-49 | -8.615850e-47 |
| Msa0237240 | Msa0401060 | 0.805339 | 1.400016e-49 | -8.615850e-47 |
| Msa0368920 | Msa0401060 | 0.829552 | 4.828456e-55 | -8.615850e-47 |
| Msa0372100 | Msa0401060 | 0.817125 | 3.878348e-52 | -8.615850e-47 |
| Msa0373170 | Msa0401060 | 0.835232 | 1.891764e-56 | -8.615850e-47 |
| Msa0373590 | Msa0401060 | 0.802676 | 5.009604e-49 | -8.615850e-47 |
| Msa0382230 | Msa0401060 | 0.810271 | 1.252107e-50 | -8.615850e-47 |
| Msa0386540 | Msa0401060 | 0.808708 | 2.711505e-50 | -8.615850e-47 |
| Msa0388250 | Msa0401060 | 0.815375 | 9.545418e-52 | -8.615850e-47 |
| Msa0396000 | Msa0401060 | 0.813557 | 2.410084e-51 | -8.615850e-47 |
| Msa0401060 | Msa0413170 | 0.807788 | 4.259290e-50 | -8.615850e-47 |
| Msa0401060 | Msa0416210 | 0.851989 | 6.195076e-61 | -8.615850e-47 |
| Msa0401060 | Msa0421130 | 0.822082 | 2.865630e-53 | -8.615850e-47 |
| Msa0401060 | Msa0421750 | 0.836173 | 1.093056e-56 | -8.615850e-47 |
| Msa0401060 | Msa0431200 | 0.807228 | 5.599719e-50 | -8.615850e-47 |
| Msa0401060 | Msa0432010 | 0.803586 | 3.247571e-49 | -8.615850e-47 |
| Msa0401060 | Msa0433630 | 0.862914 | 3.616216e-64 | -8.615850e-47 |
| Msa0401060 | Msa0437480 | 0.846669 | 1.878279e-59 | -8.615850e-47 |
| Msa0401060 | Msa0440350 | 0.834891 | 2.305491e-56 | -8.615850e-47 |
| Msa0401060 | Msa0447870 | 0.915816 | 3.754487e-85 | -8.615850e-47 |
| Msa0401060 | Msa0458100 | 0.841286 | 5.208781e-58 | -8.615850e-47 |
| Msa0401060 | Msa0466520 | 0.818144 | 2.284216e-52 | -8.615850e-47 |
| Msa0401060 | Msa0466880 | 0.826913 | 2.089334e-54 | -8.615850e-47 |
| Msa0401060 | Msa0467690 | 0.837465 | 5.115845e-57 | -8.615850e-47 |
| Msa0401060 | Msa0468700 | 0.811114 | 8.232429e-51 | -8.615850e-47 |
| Msa0401060 | Msa0478140 | 0.808030 | 3.782720e-50 | -8.615850e-47 |
| Msa0401060 | Msa0478200 | 0.800982 | 1.115975e-48 | -8.615850e-47 |
| Msa0401060 | Msa0495620 | 0.883395 | 4.651349e-71 | -8.615850e-47 |
| Msa0401060 | Msa0500920 | 0.819071 | 1.408039e-52 | -8.615850e-47 |
| Msa0401060 | Msa0504720 | 0.852576 | 4.215735e-61 | -8.615850e-47 |
| Msa0401060 | Msa0513640 | 0.816573 | 5.158315e-52 | -8.615850e-47 |
| Msa0401060 | Msa0514020 | 0.843716 | 1.180745e-58 | -8.615850e-47 |
| Msa0401060 | Msa0514580 | 0.807890 | 4.052984e-50 | -8.615850e-47 |
| Msa0401060 | Msa0520260 | 0.803806 | 2.924211e-49 | -8.615850e-47 |
| Msa0401060 | Msa0520680 | 0.808306 | 3.304330e-50 | -8.615850e-47 |
| Msa0401060 | Msa0521510 | 0.858623 | 7.255842e-63 | -8.615850e-47 |
| Msa0401060 | Msa0521530 | 0.824933 | 6.171873e-54 | -8.615850e-47 |
| Msa0401060 | Msa0527850 | 0.829632 | 4.617328e-55 | -8.615850e-47 |
| Msa0401060 | Msa0530660 | 0.804360 | 2.242120e-49 | -8.615850e-47 |
| Msa0401060 | Msa0533990 | 0.823528 | 1.319519e-53 | -8.615850e-47 |
| Msa0401060 | Msa0541740 | 0.816826 | 4.526865e-52 | -8.615850e-47 |
| Msa0401060 | Msa0553750 | 0.862921 | 3.597585e-64 | -8.615850e-47 |
| Msa0401060 | Msa0554300 | 0.813814 | 2.115028e-51 | -8.615850e-47 |
| Msa0401060 | Msa0561560 | 0.812067 | 5.107343e-51 | -8.615850e-47 |
| Msa0401060 | Msa0567570 | 0.802784 | 4.758946e-49 | -8.615850e-47 |
| Msa0401060 | Msa0568290 | -0.802607 | 5.177940e-49 | -8.615850e-47 |
| Msa0401060 | Msa0572830 | 0.858586 | 7.441693e-63 | -8.615850e-47 |
| Msa0401060 | Msa0574660 | 0.843468 | 1.375447e-58 | -8.615850e-47 |
| Msa0401060 | Msa0576330 | 0.825797 | 3.853741e-54 | -8.615850e-47 |
| Msa0401060 | Msa0580940 | 0.842566 | 2.390813e-58 | -8.615850e-47 |
| Msa0401060 | Msa0582460 | 0.827251 | 1.734641e-54 | -8.615850e-47 |
| Msa0401060 | Msa0586200 | 0.829045 | 6.412597e-55 | -8.615850e-47 |
| Msa0401060 | Msa0587180 | 0.804510 | 2.086500e-49 | -8.615850e-47 |
| Msa0401060 | Msa0590000 | 0.843632 | 1.243620e-58 | -8.615850e-47 |
| Msa0401060 | Msa0605520 | 0.807384 | 5.190423e-50 | -8.615850e-47 |
| Msa0401060 | Msa0607800 | 0.848926 | 4.487874e-60 | -8.615850e-47 |
| Msa0401060 | Msa0615630 | 0.818680 | 1.727641e-52 | -8.615850e-47 |
| Msa0401060 | Msa0619320 | -0.812850 | 3.444603e-51 | -8.615850e-47 |
| Msa0401060 | Msa0619710 | 0.808119 | 3.622719e-50 | -8.615850e-47 |
| Msa0401060 | Msa0620500 | 0.835671 | 1.464659e-56 | -8.615850e-47 |
| Msa0401060 | Msa0620510 | 0.836024 | 1.192419e-56 | -8.615850e-47 |
| Msa0401060 | Msa0623310 | 0.840428 | 8.747520e-58 | -8.615850e-47 |
| Msa0401060 | Msa0625620 | 0.823469 | 1.361944e-53 | -8.615850e-47 |
| Msa0401060 | Msa0626980 | 0.807003 | 6.249925e-50 | -8.615850e-47 |
| Msa0401060 | Msa0627360 | 0.803148 | 4.003180e-49 | -8.615850e-47 |
| Msa0401060 | Msa0630440 | 0.877140 | 7.975762e-69 | -8.615850e-47 |
| Msa0401060 | Msa0647440 | 0.842551 | 2.412745e-58 | -8.615850e-47 |
| Msa0401060 | Msa0648040 | 0.855442 | 6.293528e-62 | -8.615850e-47 |
| Msa0401060 | Msa0648760 | 0.812107 | 5.006357e-51 | -8.615850e-47 |
| Msa0401060 | Msa0657210 | 0.812453 | 4.207626e-51 | -8.615850e-47 |
| Msa0401060 | Msa0660090 | 0.808664 | 2.770926e-50 | -8.615850e-47 |
| Msa0401060 | Msa0660260 | 0.807064 | 6.065894e-50 | -8.615850e-47 |
| Msa0401060 | Msa0663290 | 0.815532 | 8.810605e-52 | -8.615850e-47 |
| Msa0401060 | Msa0664070 | 0.823154 | 1.613362e-53 | -8.615850e-47 |
| Msa0401060 | Msa0673940 | 0.815198 | 1.045089e-51 | -8.615850e-47 |
| Msa0401060 | Msa0685390 | -0.804978 | 1.665923e-49 | -8.615850e-47 |
| Msa0401060 | Msa0687090 | 0.856293 | 3.547293e-62 | -8.615850e-47 |
| Msa0401060 | Msa0687370 | 0.836768 | 7.711960e-57 | -8.615850e-47 |
| Msa0401060 | Msa0688380 | 0.844171 | 8.920188e-59 | -8.615850e-47 |
| Msa0401060 | Msa0689660 | 0.817544 | 3.120681e-52 | -8.615850e-47 |
| Msa0401060 | Msa0689830 | 0.842476 | 2.526633e-58 | -8.615850e-47 |
| Msa0401060 | Msa0690320 | 0.822981 | 1.770877e-53 | -8.615850e-47 |
| Msa0401060 | Msa0690740 | 0.859200 | 4.875047e-63 | -8.615850e-47 |
| Msa0401060 | Msa0701250 | 0.815437 | 9.247314e-52 | -8.615850e-47 |
| Msa0401060 | Msa0706150 | 0.809430 | 1.899773e-50 | -8.615850e-47 |
| Msa0401060 | Msa0707260 | 0.868231 | 7.614750e-66 | -8.615850e-47 |
| Msa0401060 | Msa0708020 | 0.826694 | 2.357349e-54 | -8.615850e-47 |
| Msa0401060 | Msa0714520 | 0.807017 | 6.208125e-50 | -8.615850e-47 |
| Msa0401060 | Msa0717900 | 0.828349 | 9.446468e-55 | -8.615850e-47 |
| Msa0401060 | Msa0735010 | 0.806042 | 9.967797e-50 | -8.615850e-47 |
| Msa0401060 | Msa0747000 | 0.804074 | 2.571529e-49 | -8.615850e-47 |
| Msa0401060 | Msa0751720 | 0.829317 | 5.506730e-55 | -8.615850e-47 |
| Msa0401060 | Msa0752780 | 0.819983 | 8.720223e-53 | -8.615850e-47 |
| Msa0401060 | Msa0756330 | 0.836365 | 9.768268e-57 | -8.615850e-47 |
| Msa0401060 | Msa0766860 | 0.834270 | 3.303558e-56 | -8.615850e-47 |
| Msa0401060 | Msa0771910 | 0.802877 | 4.554199e-49 | -8.615850e-47 |
| Msa0401060 | Msa0774060 | 0.840238 | 9.804901e-58 | -8.615850e-47 |
| Msa0401060 | Msa0811690 | 0.805221 | 1.482046e-49 | -8.615850e-47 |
| Msa0401060 | Msa0816080 | 0.847620 | 1.030415e-59 | -8.615850e-47 |
| Msa0401060 | Msa0821160 | 0.815396 | 9.446551e-52 | -8.615850e-47 |
| Msa0401060 | Msa0831620 | 0.802588 | 5.224603e-49 | -8.615850e-47 |
| Msa0401060 | Msa0831820 | 0.815287 | 9.988479e-52 | -8.615850e-47 |
| Msa0401060 | Msa0835750 | 0.825532 | 4.453466e-54 | -8.615850e-47 |
| Msa0401060 | Msa0837680 | 0.838726 | 2.423220e-57 | -8.615850e-47 |
| Msa0401060 | Msa0846900 | 0.826203 | 3.085448e-54 | -8.615850e-47 |
| Msa0401060 | Msa0861440 | 0.829157 | 6.023480e-55 | -8.615850e-47 |
| Msa0401060 | Msa0866460 | 0.808719 | 2.697825e-50 | -8.615850e-47 |
| Msa0401060 | Msa0876630 | 0.824313 | 8.636454e-54 | -8.615850e-47 |
| Msa0401060 | Msa0900090 | 0.843349 | 1.480380e-58 | -8.615850e-47 |
| Msa0401060 | Msa0903340 | 0.816135 | 6.464253e-52 | -8.615850e-47 |
| Msa0401060 | Msa0925330 | 0.863667 | 2.113470e-64 | -8.615850e-47 |
| Msa0401060 | Msa0926310 | 0.827333 | 1.657836e-54 | -8.615850e-47 |
| Msa0401060 | Msa0926760 | 0.817534 | 3.137256e-52 | -8.615850e-47 |
| Msa0401060 | Msa0930040 | 0.808462 | 3.060575e-50 | -8.615850e-47 |
| Msa0401060 | Msa0945900 | 0.822685 | 2.075032e-53 | -8.615850e-47 |
| Msa0401060 | Msa0956350 | 0.828325 | 9.570862e-55 | -8.615850e-47 |
| Msa0401060 | Msa0966120 | 0.865559 | 5.409216e-65 | -8.615850e-47 |
| Msa0401060 | Msa0967780 | 0.809026 | 2.318676e-50 | -8.615850e-47 |
| Msa0401060 | Msa0976380 | 0.822543 | 2.239756e-53 | -8.615850e-47 |
| Msa0401060 | Msa0978980 | 0.800808 | 1.211094e-48 | -8.615850e-47 |
| Msa0401060 | Msa0999950 | 0.815804 | 7.661797e-52 | -8.615850e-47 |
| Msa0401060 | Msa1000780 | 0.816752 | 4.702625e-52 | -8.615850e-47 |
| Msa0401060 | Msa1002640 | 0.808886 | 2.484619e-50 | -8.615850e-47 |
| Msa0401060 | Msa1008850 | 0.821865 | 3.217446e-53 | -8.615850e-47 |
| Msa0401060 | Msa1019180 | 0.839125 | 1.910030e-57 | -8.615850e-47 |
| Msa0401060 | Msa1019200 | 0.840670 | 7.562507e-58 | -8.615850e-47 |
| Msa0401060 | Msa1021560 | 0.857065 | 2.103278e-62 | -8.615850e-47 |
| Msa0401060 | Msa1025200 | 0.827618 | 1.416510e-54 | -8.615850e-47 |
| Msa0401060 | Msa1025220 | 0.811146 | 8.102476e-51 | -8.615850e-47 |
| Msa0401060 | Msa1038860 | 0.835077 | 2.069683e-56 | -8.615850e-47 |
| Msa0401060 | Msa1050260 | 0.836195 | 1.078796e-56 | -8.615850e-47 |
| Msa0401060 | Msa1076020 | 0.802966 | 4.365135e-49 | -8.615850e-47 |
| Msa0401060 | Msa1078080 | 0.839095 | 1.945151e-57 | -8.615850e-47 |
| Msa0401060 | Msa1085680 | 0.830635 | 2.628759e-55 | -8.615850e-47 |
| Msa0401060 | Msa1104110 | 0.852530 | 4.345551e-61 | -8.615850e-47 |
| Msa0401060 | Msa1105540 | 0.805668 | 1.194582e-49 | -8.615850e-47 |
| Msa0401060 | Msa1105580 | 0.803411 | 3.530905e-49 | -8.615850e-47 |
| Msa0401060 | Msa1106220 | 0.820509 | 6.605178e-53 | -8.615850e-47 |
| Msa0401060 | Msa1124210 | 0.809627 | 1.723716e-50 | -8.615850e-47 |
| Msa0401060 | Msa1138800 | 0.814196 | 1.742188e-51 | -8.615850e-47 |
| Msa0401060 | Msa1144990 | 0.817901 | 2.592426e-52 | -8.615850e-47 |
| Msa0401060 | Msa1147700 | 0.862603 | 4.507276e-64 | -8.615850e-47 |
| Msa0401060 | Msa1148930 | 0.846888 | 1.636764e-59 | -8.615850e-47 |
| Msa0401060 | Msa1163180 | 0.811545 | 6.636046e-51 | -8.615850e-47 |
| Msa0401060 | Msa1166290 | 0.803620 | 3.195750e-49 | -8.615850e-47 |
| Msa0401060 | Msa1168310 | 0.802387 | 5.748126e-49 | -8.615850e-47 |
| Msa0401060 | Msa1180840 | 0.820263 | 7.524648e-53 | -8.615850e-47 |
| Msa0401060 | Msa1188340 | 0.876333 | 1.517411e-68 | -8.615850e-47 |
| Msa0401060 | Msa1191000 | 0.804810 | 1.806649e-49 | -8.615850e-47 |
| Msa0401060 | Msa1201780 | 0.830683 | 2.557298e-55 | -8.615850e-47 |
| Msa0401060 | Msa1206040 | 0.837833 | 4.114923e-57 | -8.615850e-47 |
| Msa0401060 | Msa1215980 | 0.835539 | 1.582011e-56 | -8.615850e-47 |
| Msa0401060 | Msa1215990 | 0.835015 | 2.145928e-56 | -8.615850e-47 |
| Msa0401060 | Msa1216340 | 0.838448 | 2.858889e-57 | -8.615850e-47 |
| Msa0401060 | Msa1217890 | 0.822748 | 2.006930e-53 | -8.615850e-47 |
| Msa0401060 | Msa1219930 | 0.806223 | 9.131127e-50 | -8.615850e-47 |
| Msa0401060 | Msa1220580 | 0.849060 | 4.119367e-60 | -8.615850e-47 |
| Msa0401060 | Msa1223390 | 0.824359 | 8.426167e-54 | -8.615850e-47 |
| Msa0401060 | Msa1226370 | 0.831497 | 1.614105e-55 | -8.615850e-47 |
| Msa0401060 | Msa1231490 | 0.802726 | 4.893254e-49 | -8.615850e-47 |
| Msa0401060 | Msa1240940 | 0.883583 | 3.967714e-71 | -8.615850e-47 |
| Msa0401060 | Msa1242160 | 0.801176 | 1.018545e-48 | -8.615850e-47 |
| Msa0401060 | Msa1250660 | 0.803291 | 3.738968e-49 | -8.615850e-47 |
| Msa0401060 | Msa1254100 | 0.813729 | 2.209136e-51 | -8.615850e-47 |
| Msa0401060 | Msa1254420 | 0.856762 | 2.583108e-62 | -8.615850e-47 |
| Msa0401060 | Msa1254540 | 0.832889 | 7.306483e-56 | -8.615850e-47 |
| Msa0401060 | Msa1255710 | 0.810903 | 9.143808e-51 | -8.615850e-47 |
| Msa0401060 | Msa1261160 | 0.808526 | 2.965926e-50 | -8.615850e-47 |
| Msa0401060 | Msa1262590 | 0.855579 | 5.737921e-62 | -8.615850e-47 |
| Msa0401060 | Msa1263740 | 0.822704 | 2.054056e-53 | -8.615850e-47 |
| Msa0401060 | Msa1263780 | 0.811342 | 7.345778e-51 | -8.615850e-47 |
| Msa0401060 | Msa1267930 | 0.814712 | 1.339644e-51 | -8.615850e-47 |
| Msa0401060 | Msa1278030 | 0.809014 | 2.332749e-50 | -8.615850e-47 |
| Msa0401060 | Msa1282300 | 0.868672 | 5.486354e-66 | -8.615850e-47 |
| Msa0401060 | Msa1294280 | 0.814920 | 1.204991e-51 | -8.615850e-47 |
| Msa0401060 | Msa1294460 | 0.825696 | 4.071026e-54 | -8.615850e-47 |
| Msa0401060 | Msa1294790 | 0.839113 | 1.924190e-57 | -8.615850e-47 |
| Msa0401060 | Msa1296860 | 0.825407 | 4.767703e-54 | -8.615850e-47 |
| Msa0401060 | Msa1297070 | 0.840156 | 1.030526e-57 | -8.615850e-47 |
| Msa0401060 | Msa1306570 | 0.820277 | 7.469056e-53 | -8.615850e-47 |
| Msa0401060 | Msa1308850 | 0.806750 | 7.067925e-50 | -8.615850e-47 |
| Msa0401060 | Msa1321530 | 0.845500 | 3.908209e-59 | -8.615850e-47 |
| Msa0401060 | Msa1322960 | 0.801746 | 7.783901e-49 | -8.615850e-47 |
| Msa0401060 | Msa1328280 | 0.802564 | 5.284102e-49 | -8.615850e-47 |
| Msa0401060 | Msa1328870 | 0.836222 | 1.062232e-56 | -8.615850e-47 |
| Msa0401060 | Msa1332650 | 0.800258 | 1.568109e-48 | -8.615850e-47 |
| Msa0401060 | Msa1332950 | 0.819082 | 1.399980e-52 | -8.615850e-47 |
| Msa0401060 | Msa1333500 | 0.848529 | 5.784697e-60 | -8.615850e-47 |
| Msa0401060 | Msa1334560 | 0.851806 | 6.981837e-61 | -8.615850e-47 |
| Msa0401060 | Msa1339170 | 0.800236 | 1.584419e-48 | -8.615850e-47 |
| Msa0401060 | Msa1342810 | 0.827309 | 1.680214e-54 | -8.615850e-47 |
| Msa0401060 | Msa1349690 | 0.810448 | 1.146715e-50 | -8.615850e-47 |
| Msa0401060 | Msa1352580 | 0.821339 | 4.256225e-53 | -8.615850e-47 |
| Msa0401060 | Msa1362590 | 0.816545 | 5.234105e-52 | -8.615850e-47 |
| Msa0401060 | Msa1363010 | 0.825021 | 5.883622e-54 | -8.615850e-47 |
| Msa0401060 | Msa1364680 | 0.803417 | 3.521526e-49 | -8.615850e-47 |
| Msa0401060 | Msa1368170 | 0.866222 | 3.338692e-65 | -8.615850e-47 |
| Msa0401060 | Msa1368750 | 0.804680 | 1.922868e-49 | -8.615850e-47 |
| Msa0401060 | Msa1371800 | 0.840552 | 8.118010e-58 | -8.615850e-47 |
| Msa0401060 | Msa1372030 | 0.807208 | 5.656331e-50 | -8.615850e-47 |
| Msa0401060 | Msa1374790 | 0.807419 | 5.100787e-50 | -8.615850e-47 |
| Msa0401060 | Msa1375350 | 0.819346 | 1.218653e-52 | -8.615850e-47 |
| Msa0401060 | Msa1376310 | 0.840180 | 1.015583e-57 | -8.615850e-47 |
| Msa0401060 | Msa1381030 | 0.803102 | 4.092067e-49 | -8.615850e-47 |
| Msa0401060 | Msa1383310 | 0.806117 | 9.609703e-50 | -8.615850e-47 |
| Msa0401060 | Msa1385570 | 0.865418 | 5.989926e-65 | -8.615850e-47 |
| Msa0401060 | Msa1387500 | 0.820129 | 8.076041e-53 | -8.615850e-47 |
| Msa0401060 | Msa1389820 | 0.848972 | 4.359287e-60 | -8.615850e-47 |
| Msa0401060 | Msa1393560 | 0.853515 | 2.270554e-61 | -8.615850e-47 |
| Msa0401060 | Msa1398490 | 0.809754 | 1.618334e-50 | -8.615850e-47 |
| Msa0401060 | Msa1399190 | 0.811694 | 6.158762e-51 | -8.615850e-47 |
| Msa0401060 | Msa1400780 | 0.817057 | 4.017052e-52 | -8.615850e-47 |
| Msa0401060 | Msa1402010 | 0.862893 | 3.669589e-64 | -8.615850e-47 |
| Msa0401060 | Msa1406720 | 0.817145 | 3.838835e-52 | -8.615850e-47 |
| Msa0401060 | Msa1407810 | 0.800524 | 1.384413e-48 | -8.615850e-47 |
| Msa0401060 | Msa1408160 | 0.844685 | 6.487704e-59 | -8.615850e-47 |
| Msa0401060 | Msa1410160 | 0.811481 | 6.852996e-51 | -8.615850e-47 |
| Msa0401060 | Msa1419900 | 0.840947 | 6.394663e-58 | -8.615850e-47 |
| Msa0401060 | Msa1420830 | 0.814506 | 1.487852e-51 | -8.615850e-47 |
| Msa0401060 | Msa1424590 | 0.805359 | 1.387035e-49 | -8.615850e-47 |
| Msa0401060 | Msa1426320 | 0.832370 | 9.825560e-56 | -8.615850e-47 |
| Msa0401060 | Msa1428000 | 0.806239 | 9.058907e-50 | -8.615850e-47 |
| Msa0401060 | Msa1433360 | 0.809204 | 2.123504e-50 | -8.615850e-47 |
| Msa0401060 | Msa1435100 | 0.801951 | 7.066370e-49 | -8.615850e-47 |
| Msa0401060 | Msa1437780 | 0.800816 | 1.206876e-48 | -8.615850e-47 |
| Msa0401060 | Msa1438510 | 0.837140 | 6.194801e-57 | -8.615850e-47 |
| Msa0401060 | Msa1439730 | 0.803002 | 4.291717e-49 | -8.615850e-47 |
| Msa0401060 | Msa1440430 | 0.803630 | 3.181149e-49 | -8.615850e-47 |
| Msa0401060 | Msa1447100 | 0.811067 | 8.425123e-51 | -8.615850e-47 |
| Msa0401060 | Msa1448960 | 0.837887 | 3.985732e-57 | -8.615850e-47 |
| Msa0401060 | Msa1451820 | 0.810251 | 1.264661e-50 | -8.615850e-47 |
| Msa0241040 | Msa0401060 | 0.807164 | 5.778697e-50 | -8.615850e-47 |
| Msa0246210 | Msa0401060 | 0.820001 | 8.636069e-53 | -8.615850e-47 |
| Msa0248100 | Msa0401060 | 0.820673 | 6.058211e-53 | -8.615850e-47 |
| Msa0249870 | Msa0401060 | 0.821423 | 4.069929e-53 | -8.615850e-47 |
| Msa0260570 | Msa0401060 | 0.813072 | 3.079481e-51 | -8.615850e-47 |
| Msa0260630 | Msa0401060 | 0.820737 | 5.855754e-53 | -8.615850e-47 |
| Msa0260980 | Msa0401060 | 0.811365 | 7.262659e-51 | -8.615850e-47 |
| Msa0262750 | Msa0401060 | 0.819362 | 1.208840e-52 | -8.615850e-47 |
| Msa0276850 | Msa0401060 | 0.832405 | 9.633155e-56 | -8.615850e-47 |
| Msa0276860 | Msa0401060 | 0.826905 | 2.099077e-54 | -8.615850e-47 |
| Msa0281540 | Msa0401060 | 0.810318 | 1.223212e-50 | -8.615850e-47 |
| Msa0284800 | Msa0401060 | 0.827551 | 1.469891e-54 | -8.615850e-47 |
| Msa0300470 | Msa0401060 | 0.817308 | 3.528358e-52 | -8.615850e-47 |
| Msa0304250 | Msa0401060 | 0.806125 | 9.573808e-50 | -8.615850e-47 |
| Msa0307280 | Msa0401060 | 0.805981 | 1.026641e-49 | -8.615850e-47 |
| Msa0320580 | Msa0401060 | 0.809311 | 2.014991e-50 | -8.615850e-47 |
| Msa0325350 | Msa0401060 | 0.806184 | 9.305645e-50 | -8.615850e-47 |
| Msa0330520 | Msa0401060 | 0.809923 | 1.488255e-50 | -8.615850e-47 |
| Msa0331110 | Msa0401060 | 0.870370 | 1.536069e-66 | -8.615850e-47 |
| Msa0334660 | Msa0401060 | 0.810427 | 1.158986e-50 | -8.615850e-47 |
| Msa0336430 | Msa0401060 | 0.825798 | 3.850939e-54 | -8.615850e-47 |
| Msa0336460 | Msa0401060 | 0.841683 | 4.095082e-58 | -8.615850e-47 |
| Msa0336520 | Msa0401060 | 0.815225 | 1.030897e-51 | -8.615850e-47 |
| Msa0337970 | Msa0401060 | 0.814641 | 1.389101e-51 | -8.615850e-47 |
| Msa0341680 | Msa0401060 | 0.802185 | 6.325543e-49 | -8.615850e-47 |
| Msa0344110 | Msa0401060 | 0.814028 | 1.897866e-51 | -8.615850e-47 |
| Msa0349550 | Msa0401060 | 0.812213 | 4.747460e-51 | -8.615850e-47 |
| Msa0354840 | Msa0401060 | 0.840829 | 6.870925e-58 | -8.615850e-47 |
| Msa0356640 | Msa0401060 | 0.875341 | 3.325978e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401060 | MtrunA17_Chr3g0089391 | 99.183 | 367 | 3 | 0 | 1 | 367 | 1 | 367 | 0.0 | 746 |
| Msa0401060 | MtrunA17_Chr4g0019581 | 78.804 | 368 | 77 | 1 | 1 | 367 | 72 | 439 | 0.0 | 631 |
| Msa0401060 | MtrunA17_Chr4g0019571 | 80.654 | 367 | 71 | 0 | 1 | 367 | 4 | 370 | 0.0 | 626 |
| Msa0401060 | MtrunA17_Chr4g0019601 | 78.474 | 367 | 79 | 0 | 1 | 367 | 4 | 370 | 0.0 | 621 |
| Msa0401060 | MtrunA17_Chr1g0149051 | 56.325 | 332 | 143 | 2 | 32 | 361 | 37 | 368 | 2.98e-133 | 385 |
| Msa0401060 | MtrunA17_Chr2g0332541 | 50.595 | 336 | 160 | 2 | 32 | 361 | 26 | 361 | 3.07e-119 | 350 |
| Msa0401060 | MtrunA17_Chr2g0286051 | 42.416 | 356 | 196 | 2 | 9 | 363 | 18 | 365 | 2.52e-93 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401060 | AT3G08030.1 | 67.816 | 348 | 111 | 1 | 21 | 367 | 18 | 365 | 4.81e-177 | 496 |
| Msa0401060 | AT3G08030.2 | 69.040 | 323 | 99 | 1 | 46 | 367 | 1 | 323 | 2.93e-168 | 473 |
| Msa0401060 | AT2G41800.1 | 61.960 | 347 | 128 | 3 | 22 | 364 | 21 | 367 | 6.52e-155 | 441 |
| Msa0401060 | AT2G41810.1 | 58.242 | 364 | 151 | 1 | 1 | 363 | 3 | 366 | 1.08e-152 | 435 |
| Msa0401060 | AT5G25460.1 | 54.571 | 350 | 158 | 1 | 13 | 361 | 12 | 361 | 1.47e-140 | 404 |
| Msa0401060 | AT5G11420.1 | 56.193 | 331 | 144 | 1 | 32 | 361 | 28 | 358 | 2.81e-139 | 400 |
| Msa0401060 | AT4G32460.2 | 55.589 | 331 | 146 | 1 | 32 | 361 | 27 | 357 | 1.27e-134 | 389 |
| Msa0401060 | AT4G32460.1 | 55.589 | 331 | 146 | 1 | 32 | 361 | 27 | 357 | 1.27e-134 | 389 |
| Msa0401060 | AT4G32460.4 | 55.836 | 317 | 139 | 1 | 46 | 361 | 1 | 317 | 1.84e-130 | 377 |
| Msa0401060 | AT4G32460.3 | 55.836 | 317 | 139 | 1 | 46 | 361 | 1 | 317 | 1.84e-130 | 377 |
| Msa0401060 | AT1G80240.1 | 51.964 | 331 | 158 | 1 | 32 | 361 | 30 | 360 | 3.08e-121 | 355 |
| Msa0401060 | AT1G29980.1 | 41.834 | 349 | 193 | 2 | 25 | 363 | 34 | 382 | 5.37e-94 | 286 |
| Msa0401060 | AT1G29980.2 | 42.647 | 340 | 185 | 2 | 34 | 363 | 7 | 346 | 7.05e-94 | 285 |
| Msa0401060 | AT2G34510.1 | 43.155 | 336 | 185 | 2 | 34 | 363 | 43 | 378 | 1.44e-93 | 285 |
| Msa0401060 | AT2G34510.2 | 45.205 | 292 | 154 | 2 | 78 | 363 | 1 | 292 | 2.02e-85 | 261 |
| Msa0401060 | AT5G14150.2 | 28.933 | 356 | 218 | 11 | 31 | 367 | 22 | 361 | 5.24e-31 | 121 |
| Msa0401060 | AT5G14150.1 | 28.933 | 356 | 218 | 11 | 31 | 367 | 22 | 361 | 5.24e-31 | 121 |
Find 108 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTTGGTTGAGTTGAAAAT+TGG | 0.160332 | 3_2:+25946622 | None:intergenic |
| TTGGTATTCTTTAGGTCTTT+AGG | 0.165937 | 3_2:+25948075 | None:intergenic |
| ACCCTTCCCTTCGGATTTAA+AGG | 0.170947 | 3_2:+25946315 | None:intergenic |
| CAACTCTATGCTTTAATTCT+TGG | 0.196335 | 3_2:-25947883 | Msa0401060:CDS |
| TGGTATTCTTTAGGTCTTTA+GGG | 0.221241 | 3_2:+25948076 | None:intergenic |
| AAACCATTGATTTCCCATTT+TGG | 0.221713 | 3_2:+25948030 | None:intergenic |
| TTTGCAGTTTATCTTCAAAA+TGG | 0.237288 | 3_2:-25948120 | Msa0401060:intron |
| TTCAATTTCTCAAACAATTA+AGG | 0.237533 | 3_2:-25947917 | Msa0401060:CDS |
| CAATGAGCTTGGTATTCTTT+AGG | 0.255171 | 3_2:+25948067 | None:intergenic |
| ATGGTCTATTGCAGTTAATT+TGG | 0.269737 | 3_2:-25946677 | Msa0401060:intron |
| TTCTTTAGGTCTTTAGGGTT+TGG | 0.285094 | 3_2:+25948081 | None:intergenic |
| GTATCACCTTCTGGTATTCT+AGG | 0.307765 | 3_2:+25949171 | None:intergenic |
| AAATAAGGGACCAGTTGTTT+TGG | 0.332997 | 3_2:+25945892 | None:intergenic |
| AAGCAAAGAACAAAGCTAAA+AGG | 0.333487 | 3_2:+25949217 | None:intergenic |
| CATACTAGAATCGATGATTA+TGG | 0.335052 | 3_2:-25946217 | Msa0401060:CDS |
| CAATGGTGATGTTATTGCTT+GGG | 0.353561 | 3_2:-25947770 | Msa0401060:CDS |
| ACAAGCAGGAGAAATCTTAA+AGG | 0.362453 | 3_2:+25946009 | None:intergenic |
| AGATAGATAGATAGAGAGGT+TGG | 0.363091 | 3_2:+25949351 | None:intergenic |
| CGTTGGTTGAGTTGAAAATT+GGG | 0.367643 | 3_2:+25946623 | None:intergenic |
| CTGTGGTCCTGTTCTTGATC+AGG | 0.368709 | 3_2:-25946188 | Msa0401060:CDS |
| TTACCTCTTGTTGGCATTGG+AGG | 0.374908 | 3_2:+25947637 | None:intergenic |
| AGCATGTAACTATCAAATTA+TGG | 0.378122 | 3_2:+25945860 | None:intergenic |
| GGAGCAGTTGAGCTTGTTGC+TGG | 0.378795 | 3_2:-25946481 | Msa0401060:CDS |
| TATGTTTCATTACCTCTTGT+TGG | 0.381703 | 3_2:+25947628 | None:intergenic |
| CTCTAGGTTGTTTATGTTGT+GGG | 0.384003 | 3_2:-25945932 | Msa0401060:three_prime_UTR |
| CCCTTCCCTTCGGATTTAAA+GGG | 0.386595 | 3_2:+25946316 | None:intergenic |
| AAGCAGAGCTAAGCTAAGTA+TGG | 0.396146 | 3_2:+25949310 | None:intergenic |
| TCATTACCTCTTGTTGGCAT+TGG | 0.396260 | 3_2:+25947634 | None:intergenic |
| GAAAGAGTGTGAAGAGGGTT+TGG | 0.399098 | 3_2:+25949274 | None:intergenic |
| AAGGAAATCTAAATAATAGT+TGG | 0.406389 | 3_2:+25946028 | None:intergenic |
| TTCAATGTCCCATTCGGACT+TGG | 0.408118 | 3_2:-25946502 | Msa0401060:CDS |
| CTAAAGAATACCAAGCTCAT+TGG | 0.415170 | 3_2:-25948066 | Msa0401060:CDS |
| GATCTCTACTCACCACTTCC+TGG | 0.417720 | 3_2:-25946574 | Msa0401060:CDS |
| ATCTCTGTGCCTCCACAAAC+TGG | 0.418520 | 3_2:-25947823 | Msa0401060:CDS |
| TCTTCAAAATGGAAACTTTG+AGG | 0.422549 | 3_2:-25948109 | Msa0401060:CDS |
| CTTTGAGTCGATGAATTTCA+CGG | 0.423150 | 3_2:+25946528 | None:intergenic |
| ATAGATAGAGAGGTTGGGTT+GGG | 0.426656 | 3_2:+25949357 | None:intergenic |
| CAAACATTGTATAGTCTCAA+TGG | 0.435698 | 3_2:-25947787 | Msa0401060:CDS |
| AGGAAATCTAAATAATAGTT+GGG | 0.447042 | 3_2:+25946029 | None:intergenic |
| AAAATGGGAAATCAATGGTT+TGG | 0.448163 | 3_2:-25948028 | Msa0401060:CDS |
| CTTTAATTCTTGGTGCATCA+AGG | 0.450617 | 3_2:-25947873 | Msa0401060:CDS |
| CAAATTCATATTTAAGCCAC+AGG | 0.459329 | 3_2:+25946154 | None:intergenic |
| CACACTCTTTCAACTTCCAA+TGG | 0.466396 | 3_2:-25949262 | Msa0401060:exon |
| TATGAATTTACCCTTCCCTT+CGG | 0.469027 | 3_2:+25946306 | None:intergenic |
| CTACCAAAATGGGAAATCAA+TGG | 0.469575 | 3_2:-25948033 | Msa0401060:CDS |
| AAGCATTTCAATGTCCCATT+CGG | 0.485220 | 3_2:-25946508 | Msa0401060:CDS |
| GATAGATAGATAGAGAGGTT+GGG | 0.490768 | 3_2:+25949352 | None:intergenic |
| TCTACTCACCACTTCCTGGT+TGG | 0.493609 | 3_2:-25946570 | Msa0401060:CDS |
| AGAACCAGAACCAAAACAAC+TGG | 0.496168 | 3_2:-25945902 | Msa0401060:three_prime_UTR |
| GATAGATAGAGAGGTTGGGT+TGG | 0.496585 | 3_2:+25949356 | None:intergenic |
| AAAGTTCCCTTTAAATCCGA+AGG | 0.502674 | 3_2:-25946322 | Msa0401060:CDS |
| ACTATAACCTGATCAAGAAC+AGG | 0.503775 | 3_2:+25946181 | None:intergenic |
| AAGTTGAAAGAGTGTGAAGA+GGG | 0.511651 | 3_2:+25949269 | None:intergenic |
| AGAGATCTTCTTGTTGTGGT+GGG | 0.513960 | 3_2:+25946590 | None:intergenic |
| TACCTCTTGTTGGCATTGGA+GGG | 0.518654 | 3_2:+25947638 | None:intergenic |
| GTTGAGTTGAAAATTGGGAA+TGG | 0.524305 | 3_2:+25946628 | None:intergenic |
| CCCTTTAAATCCGAAGGGAA+GGG | 0.525840 | 3_2:-25946316 | Msa0401060:CDS |
| TCCCTTTAAATCCGAAGGGA+AGG | 0.529224 | 3_2:-25946317 | Msa0401060:CDS |
| CAACTGCTCCAAGTCCGAAT+GGG | 0.529354 | 3_2:+25946494 | None:intergenic |
| AATGGACCCTCTTCAAAGCT+AGG | 0.531679 | 3_2:+25946646 | None:intergenic |
| AATGGTGATGTTATTGCTTG+GGG | 0.532837 | 3_2:-25947769 | Msa0401060:CDS |
| AGAGAGAAGGGAAATTATGA+TGG | 0.536229 | 3_2:+25949391 | None:intergenic |
| GCATGTGTTCCATGAGTCAC+TGG | 0.536293 | 3_2:+25947961 | None:intergenic |
| GAGCTAAGCTAAGTATGGAA+TGG | 0.538288 | 3_2:+25949315 | None:intergenic |
| ATTAAAGCATAGAGTTGACC+AGG | 0.539744 | 3_2:+25947889 | None:intergenic |
| TCAACCATGATTTGAACTCT+AGG | 0.541126 | 3_2:-25945948 | Msa0401060:three_prime_UTR |
| GTGACTGGTGGTCCTCAACC+AGG | 0.542126 | 3_2:-25947997 | Msa0401060:CDS |
| TAGAGATCTTCTTGTTGTGG+TGG | 0.543583 | 3_2:+25946589 | None:intergenic |
| ACTCTAGGTTGTTTATGTTG+TGG | 0.543719 | 3_2:-25945933 | Msa0401060:three_prime_UTR |
| AGATAGATAGATAGATAGAG+AGG | 0.544206 | 3_2:+25949347 | None:intergenic |
| TCAACTGCTCCAAGTCCGAA+TGG | 0.550994 | 3_2:+25946493 | None:intergenic |
| CAAACAATTAAGGTCAAACC+TGG | 0.553729 | 3_2:-25947907 | Msa0401060:CDS |
| GAAAAGAGAGACACCGCCAT+TGG | 0.555042 | 3_2:+25949246 | None:intergenic |
| GAGTAGAGATCTTCTTGTTG+TGG | 0.568431 | 3_2:+25946586 | None:intergenic |
| TAGAATGTGAGTCTAGTCCT+TGG | 0.569730 | 3_2:+25946253 | None:intergenic |
| AAAGGAACATCACCAGTTTG+TGG | 0.572851 | 3_2:+25947811 | None:intergenic |
| TCAACAATCCAACCAGGAAG+TGG | 0.573834 | 3_2:+25946562 | None:intergenic |
| GAAGTTGAAAGAGTGTGAAG+AGG | 0.573948 | 3_2:+25949268 | None:intergenic |
| TGTTCTGAGAATTTGTGCAA+TGG | 0.574231 | 3_2:+25946447 | None:intergenic |
| TACCCTCCAATGCCAACAAG+AGG | 0.574406 | 3_2:-25947640 | Msa0401060:intron |
| GTAGGATCTTCTTGAACACC+AGG | 0.574842 | 3_2:+25947703 | None:intergenic |
| AGCTTTAAACTTGAAACTCA+CGG | 0.576730 | 3_2:+25946282 | None:intergenic |
| AGACTATACAATGTTTGCAA+AGG | 0.576811 | 3_2:+25947793 | None:intergenic |
| GGAACACATGCTGTGAGACT+AGG | 0.586124 | 3_2:-25947949 | Msa0401060:CDS |
| ATAGCAATTGCATCAAGAAG+TGG | 0.589206 | 3_2:+25947673 | None:intergenic |
| TCAATGGTGATGTTATTGCT+TGG | 0.590856 | 3_2:-25947771 | Msa0401060:CDS |
| ACAACCTAGAGTTCAAATCA+TGG | 0.593725 | 3_2:+25945944 | None:intergenic |
| TACAAGATCACATTCTCAGT+CGG | 0.599440 | 3_2:-25946409 | Msa0401060:CDS |
| AAACATACAAAAGAACAAGC+AGG | 0.602357 | 3_2:+25945995 | None:intergenic |
| GATGATTATGGTTCTCTCTG+TGG | 0.604613 | 3_2:-25946205 | Msa0401060:CDS |
| TCAAGAAGTGGACCACAAGT+AGG | 0.610501 | 3_2:+25947685 | None:intergenic |
| AAGTTCCCTTTAAATCCGAA+GGG | 0.616315 | 3_2:-25946321 | Msa0401060:CDS |
| TGGTTGTCACGGATCAATGA+TGG | 0.626197 | 3_2:-25946374 | Msa0401060:CDS |
| TAGTTACATGCTATGAAGCA+CGG | 0.642487 | 3_2:-25945849 | Msa0401060:three_prime_UTR |
| GTTCAAGAAGATCCTACTTG+TGG | 0.647438 | 3_2:-25947697 | Msa0401060:CDS |
| ACTCTTTCAACTTCCAATGG+CGG | 0.651205 | 3_2:-25949259 | Msa0401060:exon |
| AGTTTAAAGCTATCGCACCA+AGG | 0.662461 | 3_2:-25946270 | Msa0401060:CDS |
| GGTTTGGTAGAGTATGTGAC+TGG | 0.663787 | 3_2:-25948012 | Msa0401060:CDS |
| TTGGTAGAGTATGTGACTGG+TGG | 0.665537 | 3_2:-25948009 | Msa0401060:CDS |
| TGGTGGGAGTAAAACGCCGT+TGG | 0.674376 | 3_2:+25946606 | None:intergenic |
| CTTCAGCCTAGAATACCAGA+AGG | 0.676116 | 3_2:-25949177 | Msa0401060:intron |
| AAATTCATATTTAAGCCACA+GGG | 0.678492 | 3_2:+25946155 | None:intergenic |
| GGAACATCACCAGTTTGTGG+AGG | 0.688731 | 3_2:+25947814 | None:intergenic |
| TCAGGTTATAGTGTCCCCTG+TGG | 0.698590 | 3_2:-25946170 | Msa0401060:CDS |
| TAGGATCTTCTTGAACACCA+GGG | 0.704341 | 3_2:+25947704 | None:intergenic |
| AGAGACTCAACAATCCAACC+AGG | 0.715135 | 3_2:+25946556 | None:intergenic |
| AATTCATATTTAAGCCACAG+GGG | 0.736491 | 3_2:+25946156 | None:intergenic |
| ACTGGTGGTCCTCAACCAGG+AGG | 0.747255 | 3_2:-25947994 | Msa0401060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATAATAAATAAATGAAA+TGG | + | chr3_2:25946094-25946113 | None:intergenic | 10.0% |
| !!! | ATAAATAACGATTAATTTTT+TGG | + | chr3_2:25948062-25948081 | None:intergenic | 10.0% |
| !! | AATAAAAAATTTCTAAGCTA+AGG | + | chr3_2:25946245-25946264 | None:intergenic | 15.0% |
| !! | TTTAATAATAATGAATTTGG+TGG | - | chr3_2:25946562-25946581 | Msa0401060:CDS | 15.0% |
| !! | AACCAAAAAATTAATTGAAA+AGG | - | chr3_2:25948118-25948137 | Msa0401060:intron | 15.0% |
| !! | ACCAAAAAATTAATTGAAAA+GGG | - | chr3_2:25948119-25948138 | Msa0401060:intron | 15.0% |
| !!! | TTTTGTATGTTTCAAAAAAT+AGG | - | chr3_2:25949243-25949262 | Msa0401060:CDS | 15.0% |
| !! | ATCAAAGTATAGTGAAAAAT+AGG | + | chr3_2:25946412-25946431 | None:intergenic | 20.0% |
| !!! | ATCAGTAAAATTTTCCTATT+TGG | - | chr3_2:25946699-25946718 | Msa0401060:intron | 20.0% |
| !!! | TCAGTAAAATTTTCCTATTT+GGG | - | chr3_2:25946700-25946719 | Msa0401060:intron | 20.0% |
| !! | TTCAATTTCTCAAACAATTA+AGG | - | chr3_2:25947310-25947329 | Msa0401060:intron | 20.0% |
| !! | TTAATAACCAAGTATGTATT+TGG | - | chr3_2:25948156-25948175 | Msa0401060:intron | 20.0% |
| !!! | ATCGACTTCAAATATTTATT+TGG | - | chr3_2:25948186-25948205 | Msa0401060:intron | 20.0% |
| !!! | ATTTTTCTTAGCATTTCTTT+TGG | - | chr3_2:25948478-25948497 | Msa0401060:intron | 20.0% |
| !!! | AGTTATAGAGTTTTAATGTA+AGG | - | chr3_2:25949096-25949115 | Msa0401060:intron | 20.0% |
| !! | AGGAAATCTAAATAATAGTT+GGG | + | chr3_2:25949201-25949220 | None:intergenic | 20.0% |
| !! | AAGGAAATCTAAATAATAGT+TGG | + | chr3_2:25949202-25949221 | None:intergenic | 20.0% |
| !! | TATGGTCGAAAAATAAATAA+GGG | + | chr3_2:25949352-25949371 | None:intergenic | 20.0% |
| !! | TTATGGTCGAAAAATAAATA+AGG | + | chr3_2:25949353-25949372 | None:intergenic | 20.0% |
| ! | TATACTTTGATCTAGTTGTT+AGG | - | chr3_2:25946421-25946440 | Msa0401060:CDS | 25.0% |
| ! | ATACTTTGATCTAGTTGTTA+GGG | - | chr3_2:25946422-25946441 | Msa0401060:CDS | 25.0% |
| ! | ATGGGTTCATTAAAAAATTG+TGG | - | chr3_2:25946452-25946471 | Msa0401060:CDS | 25.0% |
| ! | GTTCATTAAAAAATTGTGGT+TGG | - | chr3_2:25946456-25946475 | Msa0401060:CDS | 25.0% |
| ! | ACAAACAATACCTTAACAAA+GGG | + | chr3_2:25946743-25946762 | None:intergenic | 25.0% |
| ! | AACAAACAATACCTTAACAA+AGG | + | chr3_2:25946744-25946763 | None:intergenic | 25.0% |
| ! | TTCTATGTAATCATATGTGT+CGG | - | chr3_2:25946851-25946870 | Msa0401060:intron | 25.0% |
| ! | TTTGCAGTTTATCTTCAAAA+TGG | - | chr3_2:25947107-25947126 | Msa0401060:intron | 25.0% |
| !! | AAAATTTTCCCTACCAAAAT+GGG | - | chr3_2:25947184-25947203 | Msa0401060:intron | 25.0% |
| ! | AGTATTTAACAAAACTGATG+TGG | + | chr3_2:25947626-25947645 | None:intergenic | 25.0% |
| ! | ATGTCAAATAGTAACTATAG+TGG | - | chr3_2:25947836-25947855 | Msa0401060:CDS | 25.0% |
| ! | ATATGATAGATCAAAGAACA+TGG | + | chr3_2:25948028-25948047 | None:intergenic | 25.0% |
| !!! | TATTTGAAAGTGTTTTGCTA+AGG | - | chr3_2:25948079-25948098 | Msa0401060:CDS | 25.0% |
| !! | GCCCTTTTCAATTAATTTTT+TGG | + | chr3_2:25948123-25948142 | None:intergenic | 25.0% |
| ! | GCAAAAAAACATACATTTGA+GGG | + | chr3_2:25948213-25948232 | None:intergenic | 25.0% |
| ! | TGCAAAAAAACATACATTTG+AGG | + | chr3_2:25948214-25948233 | None:intergenic | 25.0% |
| ! | GATAAAGCCATTAATGATTA+TGG | - | chr3_2:25948531-25948550 | Msa0401060:intron | 25.0% |
| ! | CAATAGACCATAATCATTAA+TGG | + | chr3_2:25948541-25948560 | None:intergenic | 25.0% |
| ! | AAATTCATATTTAAGCCACA+GGG | + | chr3_2:25949075-25949094 | None:intergenic | 25.0% |
| !!! | TAGAGTTTTAATGTAAGGTA+TGG | - | chr3_2:25949101-25949120 | Msa0401060:intron | 25.0% |
| ! | AGCATGTAACTATCAAATTA+TGG | + | chr3_2:25949370-25949389 | None:intergenic | 25.0% |
| ! | GTTTTATATTGGAGAGAGAA+GGG | + | chr3_2:25945851-25945870 | None:intergenic | 30.0% |
| AGATAGATAGATAGATAGAG+AGG | + | chr3_2:25945883-25945902 | None:intergenic | 30.0% | |
| AAGCAAAGAACAAAGCTAAA+AGG | + | chr3_2:25946013-25946032 | None:intergenic | 30.0% | |
| ACTTTCATATGTTCCATTGT+TGG | - | chr3_2:25946143-25946162 | Msa0401060:three_prime_UTR | 30.0% | |
| GAGAAAAATGTATCCAACAA+TGG | + | chr3_2:25946159-25946178 | None:intergenic | 30.0% | |
| ! | GTTAATTTAGCTTCTTCAGA+AGG | + | chr3_2:25946300-25946319 | None:intergenic | 30.0% |
| TAGGACTTAATATGTCACAT+TGG | + | chr3_2:25946393-25946412 | None:intergenic | 30.0% | |
| !! | GCTTTAAGATCTGTCATTTA+TGG | - | chr3_2:25946478-25946497 | Msa0401060:CDS | 30.0% |
| !!! | ATTTATGGTGAAGTTTTGAG+TGG | - | chr3_2:25946493-25946512 | Msa0401060:CDS | 30.0% |
| !!! | TTTATGGTGAAGTTTTGAGT+GGG | - | chr3_2:25946494-25946513 | Msa0401060:CDS | 30.0% |
| !!! | GTGGTACCTTTTTTTTTATG+AGG | - | chr3_2:25946581-25946600 | Msa0401060:CDS | 30.0% |
| CTGAGACCTCATAAAAAAAA+AGG | + | chr3_2:25946590-25946609 | None:intergenic | 30.0% | |
| TACAACTATGTCGGATAAAT+TGG | + | chr3_2:25946656-25946675 | None:intergenic | 30.0% | |
| TATCCGACATAGTTGTAAAA+TGG | - | chr3_2:25946659-25946678 | Msa0401060:CDS | 30.0% | |
| ! | TGACCATTTTACAACTATGT+CGG | + | chr3_2:25946665-25946684 | None:intergenic | 30.0% |
| !! | TGCTTTTTAACGAAGGAAAA+AGG | + | chr3_2:25946973-25946992 | None:intergenic | 30.0% |
| TCTTCAAAATGGAAACTTTG+AGG | - | chr3_2:25947118-25947137 | Msa0401060:intron | 30.0% | |
| TGGTATTCTTTAGGTCTTTA+GGG | + | chr3_2:25947154-25947173 | None:intergenic | 30.0% | |
| TTGGTATTCTTTAGGTCTTT+AGG | + | chr3_2:25947155-25947174 | None:intergenic | 30.0% | |
| ! | GAAAATTTTCCCTACCAAAA+TGG | - | chr3_2:25947183-25947202 | Msa0401060:intron | 30.0% |
| !! | ATTGATTTCCCATTTTGGTA+GGG | + | chr3_2:25947195-25947214 | None:intergenic | 30.0% |
| !!! | AAACCATTGATTTCCCATTT+TGG | + | chr3_2:25947200-25947219 | None:intergenic | 30.0% |
| AAAATGGGAAATCAATGGTT+TGG | - | chr3_2:25947199-25947218 | Msa0401060:intron | 30.0% | |
| CAACTCTATGCTTTAATTCT+TGG | - | chr3_2:25947344-25947363 | Msa0401060:intron | 30.0% | |
| AGACTATACAATGTTTGCAA+AGG | + | chr3_2:25947437-25947456 | None:intergenic | 30.0% | |
| CAAACATTGTATAGTCTCAA+TGG | - | chr3_2:25947440-25947459 | Msa0401060:intron | 30.0% | |
| TATGTTTCATTACCTCTTGT+TGG | + | chr3_2:25947602-25947621 | None:intergenic | 30.0% | |
| ACAAGCACTAAATAGCATAT+TGG | + | chr3_2:25947690-25947709 | None:intergenic | 30.0% | |
| TTAGTGCTTGTTTGATATCA+TGG | - | chr3_2:25947699-25947718 | Msa0401060:CDS | 30.0% | |
| ! | GTATAGTTTTTGCAAAACCA+CGG | + | chr3_2:25947736-25947755 | None:intergenic | 30.0% |
| ACTGATAGGTCTAATTATGT+AGG | + | chr3_2:25947938-25947957 | None:intergenic | 30.0% | |
| TAACCAAGTATGTATTTGGT+TGG | - | chr3_2:25948160-25948179 | Msa0401060:intron | 30.0% | |
| ! | ACTCTATTTAGTTCCTTTGA+AGG | - | chr3_2:25948271-25948290 | Msa0401060:intron | 30.0% |
| ! | TTAGTTCCTTTGAAGGATAT+TGG | - | chr3_2:25948278-25948297 | Msa0401060:intron | 30.0% |
| TATATGTGTCCATGTTTCAT+AGG | + | chr3_2:25948311-25948330 | None:intergenic | 30.0% | |
| ATGGTCTATTGCAGTTAATT+TGG | - | chr3_2:25948550-25948569 | Msa0401060:intron | 30.0% | |
| !! | AAAAATCCTAGCTTTGAAGA+GGG | - | chr3_2:25948575-25948594 | Msa0401060:intron | 30.0% |
| !! | AGCTTTAAACTTGAAACTCA+CGG | + | chr3_2:25948948-25948967 | None:intergenic | 30.0% |
| CATACTAGAATCGATGATTA+TGG | - | chr3_2:25949010-25949029 | Msa0401060:intron | 30.0% | |
| AATTCATATTTAAGCCACAG+GGG | + | chr3_2:25949074-25949093 | None:intergenic | 30.0% | |
| CAAATTCATATTTAAGCCAC+AGG | + | chr3_2:25949076-25949095 | None:intergenic | 30.0% | |
| !! | GTTTTAATGTAAGGTATGGT+TGG | - | chr3_2:25949105-25949124 | Msa0401060:intron | 30.0% |
| AAACATACAAAAGAACAAGC+AGG | + | chr3_2:25949235-25949254 | None:intergenic | 30.0% | |
| AGAGAGAAGGGAAATTATGA+TGG | + | chr3_2:25945839-25945858 | None:intergenic | 35.0% | |
| !! | GGTTTTATATTGGAGAGAGA+AGG | + | chr3_2:25945852-25945871 | None:intergenic | 35.0% |
| GATAGATAGATAGAGAGGTT+GGG | + | chr3_2:25945878-25945897 | None:intergenic | 35.0% | |
| AGATAGATAGATAGAGAGGT+TGG | + | chr3_2:25945879-25945898 | None:intergenic | 35.0% | |
| ! | AAGTTGAAAGAGTGTGAAGA+GGG | + | chr3_2:25945961-25945980 | None:intergenic | 35.0% |
| TAGATATGAGTATCACCTTC+TGG | + | chr3_2:25946068-25946087 | None:intergenic | 35.0% | |
| TCTAAGCTAAGGTACATGAA+AGG | + | chr3_2:25946234-25946253 | None:intergenic | 35.0% | |
| ! | GAATTGAATCTGAAACCTTG+AGG | - | chr3_2:25946343-25946362 | Msa0401060:CDS | 35.0% |
| ! | TAGTTGTTAGGGTCACTTTA+TGG | - | chr3_2:25946433-25946452 | Msa0401060:CDS | 35.0% |
| ! | AGTTGTTAGGGTCACTTTAT+GGG | - | chr3_2:25946434-25946453 | Msa0401060:CDS | 35.0% |
| ! | ATCTCTGCTTTGTAGGTTTT+TGG | - | chr3_2:25946929-25946948 | Msa0401060:intron | 35.0% |
| TTAAAAAGCAACCTCGATTG+AGG | - | chr3_2:25946983-25947002 | Msa0401060:intron | 35.0% | |
| AACAACTTTAGATCCTGTTC+CGG | + | chr3_2:25947060-25947079 | None:intergenic | 35.0% | |
| ! | GAACAGGATCTAAAGTTGTT+TGG | - | chr3_2:25947060-25947079 | Msa0401060:intron | 35.0% |
| !! | TTCTTTAGGTCTTTAGGGTT+TGG | + | chr3_2:25947149-25947168 | None:intergenic | 35.0% |
| CAATGAGCTTGGTATTCTTT+AGG | + | chr3_2:25947163-25947182 | None:intergenic | 35.0% | |
| CTAAAGAATACCAAGCTCAT+TGG | - | chr3_2:25947161-25947180 | Msa0401060:intron | 35.0% | |
| ! | GGAAAATTTTCCAATGAGCT+TGG | + | chr3_2:25947174-25947193 | None:intergenic | 35.0% |
| !!! | CATTGATTTCCCATTTTGGT+AGG | + | chr3_2:25947196-25947215 | None:intergenic | 35.0% |
| CTACCAAAATGGGAAATCAA+TGG | - | chr3_2:25947194-25947213 | Msa0401060:intron | 35.0% | |
| !!! | ATGTTTTTTCCAGTGACTCA+TGG | - | chr3_2:25947257-25947276 | Msa0401060:intron | 35.0% |
| CAAACAATTAAGGTCAAACC+TGG | - | chr3_2:25947320-25947339 | Msa0401060:intron | 35.0% | |
| ATTAAAGCATAGAGTTGACC+AGG | + | chr3_2:25947341-25947360 | None:intergenic | 35.0% | |
| ! | CTTTAATTCTTGGTGCATCA+AGG | - | chr3_2:25947354-25947373 | Msa0401060:intron | 35.0% |
| ! | TCAATGGTGATGTTATTGCT+TGG | - | chr3_2:25947456-25947475 | Msa0401060:intron | 35.0% |
| ! | CAATGGTGATGTTATTGCTT+GGG | - | chr3_2:25947457-25947476 | Msa0401060:intron | 35.0% |
| ! | AATGGTGATGTTATTGCTTG+GGG | - | chr3_2:25947458-25947477 | Msa0401060:intron | 35.0% |
| ! | AAAGTGACTTTTCATAACCC+TGG | - | chr3_2:25947506-25947525 | Msa0401060:intron | 35.0% |
| ATAGCAATTGCATCAAGAAG+TGG | + | chr3_2:25947557-25947576 | None:intergenic | 35.0% | |
| TTGTAGCTTCGACAAAATCA+TGG | - | chr3_2:25947757-25947776 | Msa0401060:CDS | 35.0% | |
| ! | GCTAAGGAGTTTGTTTGTTA+TGG | - | chr3_2:25948095-25948114 | Msa0401060:CDS | 35.0% |
| ATGCCAACCAAATACATACT+TGG | + | chr3_2:25948166-25948185 | None:intergenic | 35.0% | |
| ! | TTCAGAGATGAAAGTGTGTT+TGG | + | chr3_2:25948245-25948264 | None:intergenic | 35.0% |
| AAGGATCCAATATCCTTCAA+AGG | + | chr3_2:25948287-25948306 | None:intergenic | 35.0% | |
| TCAGTCTCTCAAATCATTAG+CGG | + | chr3_2:25948369-25948388 | None:intergenic | 35.0% | |
| GATTGAATGTAACCATGTGT+TGG | - | chr3_2:25948392-25948411 | Msa0401060:intron | 35.0% | |
| !! | GAAAAATCCTAGCTTTGAAG+AGG | - | chr3_2:25948574-25948593 | Msa0401060:intron | 35.0% |
| !! | GTTGAGTTGAAAATTGGGAA+TGG | + | chr3_2:25948602-25948621 | None:intergenic | 35.0% |
| !! | CGTTGGTTGAGTTGAAAATT+GGG | + | chr3_2:25948607-25948626 | None:intergenic | 35.0% |
| ! | CCAATTTTCAACTCAACCAA+CGG | - | chr3_2:25948605-25948624 | Msa0401060:intron | 35.0% |
| CTTTGAGTCGATGAATTTCA+CGG | + | chr3_2:25948702-25948721 | None:intergenic | 35.0% | |
| AAGCATTTCAATGTCCCATT+CGG | - | chr3_2:25948719-25948738 | Msa0401060:intron | 35.0% | |
| !! | TGTTCTGAGAATTTGTGCAA+TGG | + | chr3_2:25948783-25948802 | None:intergenic | 35.0% |
| TACAAGATCACATTCTCAGT+CGG | - | chr3_2:25948818-25948837 | Msa0401060:intron | 35.0% | |
| AAAGTTCCCTTTAAATCCGA+AGG | - | chr3_2:25948905-25948924 | Msa0401060:intron | 35.0% | |
| AAGTTCCCTTTAAATCCGAA+GGG | - | chr3_2:25948906-25948925 | Msa0401060:intron | 35.0% | |
| TATGAATTTACCCTTCCCTT+CGG | + | chr3_2:25948924-25948943 | None:intergenic | 35.0% | |
| ACTATAACCTGATCAAGAAC+AGG | + | chr3_2:25949049-25949068 | None:intergenic | 35.0% | |
| ! | TTTTGCAAGTCTTTTGAGCT+TGG | - | chr3_2:25949138-25949157 | Msa0401060:intron | 35.0% |
| ACAAGCAGGAGAAATCTTAA+AGG | + | chr3_2:25949221-25949240 | None:intergenic | 35.0% | |
| TCAACCATGATTTGAACTCT+AGG | - | chr3_2:25949279-25949298 | Msa0401060:five_prime_UTR | 35.0% | |
| ACAACCTAGAGTTCAAATCA+TGG | + | chr3_2:25949286-25949305 | None:intergenic | 35.0% | |
| ACTCTAGGTTGTTTATGTTG+TGG | - | chr3_2:25949294-25949313 | Msa0401060:five_prime_UTR | 35.0% | |
| CTCTAGGTTGTTTATGTTGT+GGG | - | chr3_2:25949295-25949314 | Msa0401060:five_prime_UTR | 35.0% | |
| ! | AAATAAGGGACCAGTTGTTT+TGG | + | chr3_2:25949338-25949357 | None:intergenic | 35.0% |
| TAGTTACATGCTATGAAGCA+CGG | - | chr3_2:25949378-25949397 | Msa0401060:five_prime_UTR | 35.0% | |
| !!! | GGTTGGGTTGGGTTTTATAT+TGG | + | chr3_2:25945862-25945881 | None:intergenic | 40.0% |
| ATAGATAGAGAGGTTGGGTT+GGG | + | chr3_2:25945873-25945892 | None:intergenic | 40.0% | |
| GAGCTAAGCTAAGTATGGAA+TGG | + | chr3_2:25945915-25945934 | None:intergenic | 40.0% | |
| AAGCAGAGCTAAGCTAAGTA+TGG | + | chr3_2:25945920-25945939 | None:intergenic | 40.0% | |
| ! | GAAGTTGAAAGAGTGTGAAG+AGG | + | chr3_2:25945962-25945981 | None:intergenic | 40.0% |
| CACACTCTTTCAACTTCCAA+TGG | - | chr3_2:25945965-25945984 | Msa0401060:three_prime_UTR | 40.0% | |
| ACTCTTTCAACTTCCAATGG+CGG | - | chr3_2:25945968-25945987 | Msa0401060:three_prime_UTR | 40.0% | |
| GTATCACCTTCTGGTATTCT+AGG | + | chr3_2:25946059-25946078 | None:intergenic | 40.0% | |
| !!! | GAAGTTTTGAGTGGGTAAGT+AGG | - | chr3_2:25946502-25946521 | Msa0401060:CDS | 40.0% |
| AGTAGGATTGATACTGTGCT+TGG | - | chr3_2:25946519-25946538 | Msa0401060:CDS | 40.0% | |
| ! | AAGCATTTGAGGTCCCAAAT+AGG | + | chr3_2:25946716-25946735 | None:intergenic | 40.0% |
| ATGCTTTGCACCCTTTGTTA+AGG | - | chr3_2:25946730-25946749 | Msa0401060:intron | 40.0% | |
| ! | CGACATTTTCGTGTTGTGTT+TGG | + | chr3_2:25946800-25946819 | None:intergenic | 40.0% |
| !!! | TCGAGGTTGCTTTTTAACGA+AGG | + | chr3_2:25946980-25946999 | None:intergenic | 40.0% |
| TCATCCATTATCCTCAATCG+AGG | + | chr3_2:25946997-25947016 | None:intergenic | 40.0% | |
| AGCCTCAATATGAGACTTTC+TGG | - | chr3_2:25947030-25947049 | Msa0401060:intron | 40.0% | |
| CACCAGAAAGTCTCATATTG+AGG | + | chr3_2:25947035-25947054 | None:intergenic | 40.0% | |
| ! | TATGAGACTTTCTGGTGTAC+CGG | - | chr3_2:25947038-25947057 | Msa0401060:intron | 40.0% |
| AAAGGAACATCACCAGTTTG+TGG | + | chr3_2:25947419-25947438 | None:intergenic | 40.0% | |
| TAGGATCTTCTTGAACACCA+GGG | + | chr3_2:25947526-25947545 | None:intergenic | 40.0% | |
| GTTCAAGAAGATCCTACTTG+TGG | - | chr3_2:25947530-25947549 | Msa0401060:intron | 40.0% | |
| TCATTACCTCTTGTTGGCAT+TGG | + | chr3_2:25947596-25947615 | None:intergenic | 40.0% | |
| TAGCTTCGACAAAATCATGG+TGG | - | chr3_2:25947760-25947779 | Msa0401060:CDS | 40.0% | |
| TAGGCATGATATGTGCATCA+GGG | + | chr3_2:25947896-25947915 | None:intergenic | 40.0% | |
| ATAGGCATGATATGTGCATC+AGG | + | chr3_2:25947897-25947916 | None:intergenic | 40.0% | |
| TGTAGGATCCTAGAAGTGAA+GGG | + | chr3_2:25947921-25947940 | None:intergenic | 40.0% | |
| ATGTAGGATCCTAGAAGTGA+AGG | + | chr3_2:25947922-25947941 | None:intergenic | 40.0% | |
| ! | CTAAGTAGTGGAGAACTGAT+AGG | + | chr3_2:25947952-25947971 | None:intergenic | 40.0% |
| CTATCAGTTCTCCACTACTT+AGG | - | chr3_2:25947950-25947969 | Msa0401060:CDS | 40.0% | |
| CACATAACAGACCTAAGTAG+TGG | + | chr3_2:25947964-25947983 | None:intergenic | 40.0% | |
| CACTACTTAGGTCTGTTATG+TGG | - | chr3_2:25947962-25947981 | Msa0401060:CDS | 40.0% | |
| GGATCCTTACCTATGAAACA+TGG | - | chr3_2:25948299-25948318 | Msa0401060:intron | 40.0% | |
| GTGTCCATGTTTCATAGGTA+AGG | + | chr3_2:25948306-25948325 | None:intergenic | 40.0% | |
| ATGTCTTTAGCCTGAAGTGT+TGG | - | chr3_2:25948432-25948451 | Msa0401060:intron | 40.0% | |
| ! | TTTTGTAGCACCAACACTTC+AGG | + | chr3_2:25948445-25948464 | None:intergenic | 40.0% |
| !! | CCGTTGGTTGAGTTGAAAAT+TGG | + | chr3_2:25948608-25948627 | None:intergenic | 40.0% |
| ! | AGAGATCTTCTTGTTGTGGT+GGG | + | chr3_2:25948640-25948659 | None:intergenic | 40.0% |
| ! | TAGAGATCTTCTTGTTGTGG+TGG | + | chr3_2:25948641-25948660 | None:intergenic | 40.0% |
| GAGTAGAGATCTTCTTGTTG+TGG | + | chr3_2:25948644-25948663 | None:intergenic | 40.0% | |
| ! | AGTTTAAAGCTATCGCACCA+AGG | - | chr3_2:25948957-25948976 | Msa0401060:intron | 40.0% |
| TAGAATGTGAGTCTAGTCCT+TGG | + | chr3_2:25948977-25948996 | None:intergenic | 40.0% | |
| GATGATTATGGTTCTCTCTG+TGG | - | chr3_2:25949022-25949041 | Msa0401060:intron | 40.0% | |
| AGAACCAGAACCAAAACAAC+TGG | - | chr3_2:25949325-25949344 | Msa0401060:five_prime_UTR | 40.0% | |
| GATAGATAGAGAGGTTGGGT+TGG | + | chr3_2:25945874-25945893 | None:intergenic | 45.0% | |
| ! | GAAAGAGTGTGAAGAGGGTT+TGG | + | chr3_2:25945956-25945975 | None:intergenic | 45.0% |
| CTTCAGCCTAGAATACCAGA+AGG | - | chr3_2:25946050-25946069 | Msa0401060:three_prime_UTR | 45.0% | |
| ! | TGAGAGTGTACTTCTCCTCA+AGG | + | chr3_2:25946361-25946380 | None:intergenic | 45.0% |
| ! | CAAAGGGTGCAAAGCATTTG+AGG | + | chr3_2:25946727-25946746 | None:intergenic | 45.0% |
| ! | CATATGTGTCGGTGTCTTGT+TGG | - | chr3_2:25946862-25946881 | Msa0401060:intron | 45.0% |
| ACTGAGATACACCTCATTCG+AGG | - | chr3_2:25946903-25946922 | Msa0401060:intron | 45.0% | |
| !! | GAGGAGTATCTCTGCTTTGT+AGG | - | chr3_2:25946922-25946941 | Msa0401060:intron | 45.0% |
| GCAACCTCGATTGAGGATAA+TGG | - | chr3_2:25946990-25947009 | Msa0401060:intron | 45.0% | |
| ! | GGTTTGGTAGAGTATGTGAC+TGG | - | chr3_2:25947215-25947234 | Msa0401060:intron | 45.0% |
| TTGGTAGAGTATGTGACTGG+TGG | - | chr3_2:25947218-25947237 | Msa0401060:intron | 45.0% | |
| AAAAACATGCCTCCTGGTTG+AGG | + | chr3_2:25947245-25947264 | None:intergenic | 45.0% | |
| ACTGGAAAAAACATGCCTCC+TGG | + | chr3_2:25947251-25947270 | None:intergenic | 45.0% | |
| GTAGGATCTTCTTGAACACC+AGG | + | chr3_2:25947527-25947546 | None:intergenic | 45.0% | |
| TCAAGAAGTGGACCACAAGT+AGG | + | chr3_2:25947545-25947564 | None:intergenic | 45.0% | |
| ! | TACCTCTTGTTGGCATTGGA+GGG | + | chr3_2:25947592-25947611 | None:intergenic | 45.0% |
| ! | TTACCTCTTGTTGGCATTGG+AGG | + | chr3_2:25947593-25947612 | None:intergenic | 45.0% |
| ACCAAGTGTGTCCTGTATCA+CGG | + | chr3_2:25947808-25947827 | None:intergenic | 45.0% | |
| ! | ATCCTAGAAGTGAAGGGCAT+AGG | + | chr3_2:25947915-25947934 | None:intergenic | 45.0% |
| ATCATTAGCGGTGACATGTC+AGG | + | chr3_2:25948357-25948376 | None:intergenic | 45.0% | |
| TCAAACACGACACCAACACA+TGG | + | chr3_2:25948407-25948426 | None:intergenic | 45.0% | |
| !! | TGTGTTGGTGTCGTGTTTGA+TGG | - | chr3_2:25948407-25948426 | Msa0401060:intron | 45.0% |
| AATGGACCCTCTTCAAAGCT+AGG | + | chr3_2:25948584-25948603 | None:intergenic | 45.0% | |
| TCAACAATCCAACCAGGAAG+TGG | + | chr3_2:25948668-25948687 | None:intergenic | 45.0% | |
| AGAGACTCAACAATCCAACC+AGG | + | chr3_2:25948674-25948693 | None:intergenic | 45.0% | |
| TTCAATGTCCCATTCGGACT+TGG | - | chr3_2:25948725-25948744 | Msa0401060:intron | 45.0% | |
| GACGCGAAAAATGGTTGTCA+CGG | - | chr3_2:25948842-25948861 | Msa0401060:intron | 45.0% | |
| TGGTTGTCACGGATCAATGA+TGG | - | chr3_2:25948853-25948872 | Msa0401060:intron | 45.0% | |
| TCCCTTTAAATCCGAAGGGA+AGG | - | chr3_2:25948910-25948929 | Msa0401060:intron | 45.0% | |
| CCCTTCCCTTCGGATTTAAA+GGG | + | chr3_2:25948914-25948933 | None:intergenic | 45.0% | |
| CCCTTTAAATCCGAAGGGAA+GGG | - | chr3_2:25948911-25948930 | Msa0401060:intron | 45.0% | |
| ACCCTTCCCTTCGGATTTAA+AGG | + | chr3_2:25948915-25948934 | None:intergenic | 45.0% | |
| !! | AAATTTAATAATAATGAATT+TGG | - | chr3_2:25946559-25946578 | Msa0401060:CDS | 5.0% |
| GAAAAGAGAGACACCGCCAT+TGG | + | chr3_2:25945984-25946003 | None:intergenic | 50.0% | |
| GGTGTATCTCAGTGTCAGAC+AGG | + | chr3_2:25946896-25946915 | None:intergenic | 50.0% | |
| GCAGAGATACTCCTCGAATG+AGG | + | chr3_2:25946917-25946936 | None:intergenic | 50.0% | |
| ! | ACTTTCTGGTGTACCGGAAC+AGG | - | chr3_2:25947044-25947063 | Msa0401060:intron | 50.0% |
| GCATGTGTTCCATGAGTCAC+TGG | + | chr3_2:25947269-25947288 | None:intergenic | 50.0% | |
| GGAACACATGCTGTGAGACT+AGG | - | chr3_2:25947278-25947297 | Msa0401060:intron | 50.0% | |
| ATCTCTGTGCCTCCACAAAC+TGG | - | chr3_2:25947404-25947423 | Msa0401060:intron | 50.0% | |
| GGAACATCACCAGTTTGTGG+AGG | + | chr3_2:25947416-25947435 | None:intergenic | 50.0% | |
| TACCCTCCAATGCCAACAAG+AGG | - | chr3_2:25947587-25947606 | Msa0401060:intron | 50.0% | |
| TCATGGTGAGTTTGACACCG+TGG | - | chr3_2:25947716-25947735 | Msa0401060:CDS | 50.0% | |
| AGTGTGTCCTGTATCACGGT+GGG | + | chr3_2:25947804-25947823 | None:intergenic | 50.0% | |
| AAGTGTGTCCTGTATCACGG+TGG | + | chr3_2:25947805-25947824 | None:intergenic | 50.0% | |
| ACCGTGATACAGGACACACT+TGG | - | chr3_2:25947804-25947823 | Msa0401060:CDS | 50.0% | |
| TGCCTATGCCCTTCACTTCT+AGG | - | chr3_2:25947910-25947929 | Msa0401060:CDS | 50.0% | |
| GATCTCTACTCACCACTTCC+TGG | - | chr3_2:25948653-25948672 | Msa0401060:intron | 50.0% | |
| TCTACTCACCACTTCCTGGT+TGG | - | chr3_2:25948657-25948676 | Msa0401060:intron | 50.0% | |
| CAACTGCTCCAAGTCCGAAT+GGG | + | chr3_2:25948736-25948755 | None:intergenic | 50.0% | |
| TCAACTGCTCCAAGTCCGAA+TGG | + | chr3_2:25948737-25948756 | None:intergenic | 50.0% | |
| TCAGTCGGAGACGCGAAAAA+TGG | - | chr3_2:25948833-25948852 | Msa0401060:intron | 50.0% | |
| CTGTGGTCCTGTTCTTGATC+AGG | - | chr3_2:25949039-25949058 | Msa0401060:intron | 50.0% | |
| TCAGGTTATAGTGTCCCCTG+TGG | - | chr3_2:25949057-25949076 | Msa0401060:intron | 50.0% | |
| !!! | GGGACCAGTTGTTTTGGTTC+TGG | + | chr3_2:25949332-25949351 | None:intergenic | 50.0% |
| TGTCCAACCCACCGTGATAC+AGG | - | chr3_2:25947794-25947813 | Msa0401060:CDS | 55.0% | |
| TGTCCTGTATCACGGTGGGT+TGG | + | chr3_2:25947800-25947819 | None:intergenic | 55.0% | |
| TGGTGGGAGTAAAACGCCGT+TGG | + | chr3_2:25948624-25948643 | None:intergenic | 55.0% | |
| !! | GGAGCAGTTGAGCTTGTTGC+TGG | - | chr3_2:25948746-25948765 | Msa0401060:intron | 55.0% |
| GTGACTGGTGGTCCTCAACC+AGG | - | chr3_2:25947230-25947249 | Msa0401060:intron | 60.0% | |
| ACTGGTGGTCCTCAACCAGG+AGG | - | chr3_2:25947233-25947252 | Msa0401060:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 25945833 | 25949416 | 25945833 | ID=Msa0401060;Name=Msa0401060 |
| chr3_2 | mRNA | 25945833 | 25949416 | 25945833 | ID=Msa0401060-mRNA-1;Parent=Msa0401060;Name=Msa0401060-mRNA-1;_AED=0.00;_eAED=0.00;_QI=151|1|1|1|1|1|3|332|367 |
| chr3_2 | exon | 25945833 | 25946685 | 25945833 | ID=Msa0401060-mRNA-1:exon:5440;Parent=Msa0401060-mRNA-1 |
| chr3_2 | exon | 25947641 | 25948135 | 25947641 | ID=Msa0401060-mRNA-1:exon:5439;Parent=Msa0401060-mRNA-1 |
| chr3_2 | exon | 25949178 | 25949416 | 25949178 | ID=Msa0401060-mRNA-1:exon:5438;Parent=Msa0401060-mRNA-1 |
| chr3_2 | five_prime_UTR | 25949266 | 25949416 | 25949266 | ID=Msa0401060-mRNA-1:five_prime_utr;Parent=Msa0401060-mRNA-1 |
| chr3_2 | CDS | 25949178 | 25949265 | 25949178 | ID=Msa0401060-mRNA-1:cds;Parent=Msa0401060-mRNA-1 |
| chr3_2 | CDS | 25947641 | 25948135 | 25947641 | ID=Msa0401060-mRNA-1:cds;Parent=Msa0401060-mRNA-1 |
| chr3_2 | CDS | 25946165 | 25946685 | 25946165 | ID=Msa0401060-mRNA-1:cds;Parent=Msa0401060-mRNA-1 |
| chr3_2 | three_prime_UTR | 25945833 | 25946164 | 25945833 | ID=Msa0401060-mRNA-1:three_prime_utr;Parent=Msa0401060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
