AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318410 MtrunA17_Chr2g0292051 97.267 439 11 1 1 438 1 439 0.0 860
Msa0318410 MtrunA17_Chr1g0199801 46.593 455 184 13 20 418 11 462 1.71e-132 389
Msa0318410 MtrunA17_Chr1g0185551 36.613 437 190 11 23 432 1 377 1.36e-77 246
Msa0318410 MtrunA17_Chr7g0259871 38.363 391 192 11 23 395 1 360 2.16e-73 235
Msa0318410 MtrunA17_Chr5g0402451 30.836 347 186 16 68 366 10 350 1.14e-27 113
Msa0318410 MtrunA17_Chr5g0402441 30.857 350 179 17 68 366 16 353 4.50e-27 112
Msa0318410 MtrunA17_Chr1g0153781 26.841 421 237 18 53 421 6 407 3.60e-23 100
Msa0318410 MtrunA17_Chr3g0133691 27.793 367 211 16 85 402 36 397 6.67e-23 100
Msa0318410 MtrunA17_Chr8g0335591 27.913 369 226 17 68 401 32 395 1.63e-22 99.4
Msa0318410 MtrunA17_Chr8g0335581 25.781 384 245 13 68 416 21 399 2.07e-22 98.6
Msa0318410 MtrunA17_Chr8g0335611 28.649 370 224 15 68 401 32 397 4.59e-21 94.7
Msa0318410 MtrunA17_Chr3g0133681 26.829 369 212 17 85 402 36 397 4.97e-21 94.7
Msa0318410 MtrunA17_Chr8g0335621 28.610 374 219 15 68 401 63 428 8.93e-21 94.4
Msa0318410 MtrunA17_Chr8g0335631 26.989 352 210 12 88 401 51 393 2.02e-20 92.8
Msa0318410 MtrunA17_Chr8g0335651 28.363 342 207 14 88 401 52 383 6.99e-20 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318410 AT3G54950.1 48.519 439 197 7 2 413 31 467 9.71e-135 396
Msa0318410 AT2G39220.1 47.738 442 182 7 20 413 40 480 7.89e-131 387
Msa0318410 AT4G29800.1 42.796 465 196 9 16 413 43 504 8.07e-114 344
Msa0318410 AT4G29800.2 42.704 466 196 10 16 413 43 505 5.67e-112 339
Msa0318410 AT3G63200.1 41.379 406 180 11 23 408 3 370 2.59e-85 266
Msa0318410 AT4G37060.1 30.390 385 216 19 68 404 19 399 1.03e-28 117
Msa0318410 AT2G26560.1 29.815 379 218 15 68 401 19 394 9.96e-26 108
Msa0318410 AT4G37070.2 28.646 384 219 18 68 402 19 396 2.59e-24 104
Msa0318410 AT4G37060.2 28.193 415 217 20 68 404 19 430 1.33e-23 103
Msa0318410 AT4G37050.1 28.032 371 209 16 88 403 54 421 1.39e-23 102
Msa0318410 AT4G37070.3 28.919 370 208 18 68 388 19 382 2.40e-23 101
Msa0318410 AT4G37070.1 28.919 370 208 18 68 388 19 382 2.40e-23 101
Msa0318410 AT5G43590.1 27.778 288 168 10 88 337 33 318 9.05e-21 94.4
Msa0318410 AT5G43590.2 27.778 288 168 10 88 337 100 385 1.86e-20 94.0
Msa0318410 AT4G37070.4 27.568 370 202 18 68 388 19 371 2.07e-19 89.7

Find 114 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACGAAATCTTCTCCATTT+TGG 0.129885 2_4:-17086580 Msa0318410:CDS
AACTTAATGTCTTATGGTTT+TGG 0.185895 2_4:-17084908 Msa0318410:three_prime_UTR
GTGTATTGAAACATTGATTA+TGG 0.206328 2_4:-17084623 Msa0318410:three_prime_UTR
GTTGAGTCAGTCTTATTTAA+AGG 0.208877 2_4:-17085231 Msa0318410:CDS
TTGGAAAACAAATTCTTATT+CGG 0.286942 2_4:-17086561 Msa0318410:CDS
GTCGGATTTGGTGGCGGTTT+CGG 0.292603 2_4:-17085277 Msa0318410:CDS
TTGATAGTGATTTGTTCATA+TGG 0.316975 2_4:-17084738 Msa0318410:three_prime_UTR
GGCGAAAACCGCGTCGGATT+TGG 0.323987 2_4:-17085289 Msa0318410:CDS
TTAGACAAATTGAAATTGTT+TGG 0.328034 2_4:-17085183 Msa0318410:CDS
GTTTGGTGGAGAGTTGATTA+AGG 0.342805 2_4:-17085166 Msa0318410:CDS
AATATGAGAGTTATTGTTAC+CGG 0.360900 2_4:+17086371 None:intergenic
GCAGAGAATTCTGACTTTCC+CGG 0.367032 2_4:+17086473 None:intergenic
AACAGAATTTCGCGGCGATC+GGG 0.369326 2_4:-17086216 Msa0318410:CDS
GATTTCTTCGACGCCGTTGC+CGG 0.371954 2_4:-17086345 Msa0318410:CDS
TTAGGTTTCGTGAGAATTGC+CGG 0.372620 2_4:-17085766 Msa0318410:CDS
AAGAAAAGAGGAAGATTAGT+AGG 0.373541 2_4:-17084996 Msa0318410:three_prime_UTR
TGTGTGTTGGTTGTTGAAAA+TGG 0.373674 2_4:+17086760 None:intergenic
CAACGGTGTTTCTGATTTGT+TGG 0.376050 2_4:-17085839 Msa0318410:CDS
TTCGACGCCGTTGCCGGCTC+CGG 0.399299 2_4:-17086339 Msa0318410:CDS
GAGGATGCCGTCGGTGTAAC+CGG 0.403495 2_4:+17086440 None:intergenic
GAAACCTAAGGGAGACTTAA+CGG 0.409568 2_4:+17085780 None:intergenic
GTCCTAGGAGATGAAGTTCT+AGG 0.411203 2_4:+17085081 None:intergenic
TGATAGTGATTTGTTCATAT+GGG 0.411620 2_4:-17084737 Msa0318410:three_prime_UTR
CCAACTGTTGTGTTGAAGAA+TGG 0.412565 2_4:-17085114 Msa0318410:CDS
CGCGGCGATCGGGGATTCTC+CGG 0.426841 2_4:-17086206 Msa0318410:CDS
GATTTGTTGGTGCTTTCTCT+TGG 0.427963 2_4:-17085826 Msa0318410:CDS
CAAGCTGTATCAATGGCATT+TGG 0.428031 2_4:-17085384 Msa0318410:CDS
ACGAAGATCTTAGCCGTTGA+TGG 0.429665 2_4:-17085937 Msa0318410:CDS
TTTCTCACCGGAAACAAAAT+CGG 0.433911 2_4:-17086178 Msa0318410:CDS
TATGTGCGGATTCAATCAAA+TGG 0.437366 2_4:-17085342 Msa0318410:CDS
CGGTGAAGGAGCTTCCGATA+TGG 0.438606 2_4:-17085746 Msa0318410:intron
TACGTTTGAGGCAGGATTCA+AGG 0.440645 2_4:+17086397 None:intergenic
GCCGTTGCCGGCTCCGGTGT+CGG 0.448667 2_4:-17086333 Msa0318410:CDS
TAACAGAATTTCGCGGCGAT+CGG 0.457975 2_4:-17086217 Msa0318410:CDS
GTCAGAATTCTCTGCATTGA+CGG 0.462797 2_4:-17086465 Msa0318410:CDS
TCGTAGCATGGAATCAAAAT+CGG 0.473177 2_4:+17086102 None:intergenic
TCCTGCCTCAAACGTAAATC+CGG 0.476403 2_4:-17086390 Msa0318410:CDS
ACCGGATTTACGTTTGAGGC+AGG 0.478345 2_4:+17086389 None:intergenic
AATTTCGAGCGCGTCGGCGC+GGG 0.481070 2_4:+17086050 None:intergenic
GACAAATTGAAATTGTTTGG+TGG 0.485720 2_4:-17085180 Msa0318410:CDS
GATCTTCGTCTTTCCATCGA+TGG 0.486447 2_4:+17085951 None:intergenic
TCGATGGACTTCAATTCAAT+AGG 0.487410 2_4:+17085967 None:intergenic
ATGTGCGGATTCAATCAAAT+GGG 0.488399 2_4:-17085341 Msa0318410:CDS
TTCAATTCAATAGGAGCCGC+TGG 0.490050 2_4:+17085976 None:intergenic
GTTCATATGGGTATTGTCAA+AGG 0.492141 2_4:-17084725 Msa0318410:three_prime_UTR
AAATGAAATAATTATAATGT+AGG 0.494177 2_4:+17084808 None:intergenic
TTCTCTTGGTAACGGAGAGT+TGG 0.496512 2_4:-17085812 Msa0318410:CDS
AACCGCGTCGGATTTGGTGG+CGG 0.497777 2_4:-17085283 Msa0318410:CDS
GAAAGAGAGAATTTGTGTGT+TGG 0.497803 2_4:+17086747 None:intergenic
GAAATAATTATAATGTAGGT+AGG 0.499493 2_4:+17084812 None:intergenic
GCCGACGCGCTCGAAATTGA+CGG 0.502713 2_4:-17086045 Msa0318410:CDS
TTGGTGCTTTCTCTTGGTAA+CGG 0.511918 2_4:-17085820 Msa0318410:CDS
AACACCACCGACACCGGAGC+CGG 0.516008 2_4:+17086326 None:intergenic
AACGCCGTTAAGTCTCCCTT+AGG 0.518296 2_4:-17085784 Msa0318410:CDS
GAAAACCGCGTCGGATTTGG+TGG 0.518417 2_4:-17085286 Msa0318410:CDS
GGCGGTTTCGGAGGAAATGT+TGG 0.519934 2_4:-17085265 Msa0318410:CDS
GTAGTAGCTGATGAAGTCCT+AGG 0.521279 2_4:+17085066 None:intergenic
CTCCTAGAACTTCATCTCCT+AGG 0.523753 2_4:-17085083 Msa0318410:CDS
GGTTGATCAAGCTGTATCAA+TGG 0.525148 2_4:-17085391 Msa0318410:CDS
AGTTGATTAAGGAAGAAGAG+AGG 0.528571 2_4:-17085155 Msa0318410:CDS
GGTAGGTTGTAGTAATACTT+AGG 0.529577 2_4:+17084829 None:intergenic
TTCGTGAGAATTGCCGGTGA+AGG 0.529684 2_4:-17085760 Msa0318410:CDS
GAGTTTATCAACTTCGAAGT+TGG 0.530248 2_4:+17086605 None:intergenic
ATCAAATGGGGTGATGGCTA+AGG 0.530306 2_4:-17085328 Msa0318410:CDS
AGTCAGTCTTATTTAAAGGA+AGG 0.532895 2_4:-17085227 Msa0318410:CDS
AGGTTGTAGTAATACTTAGG+AGG 0.533552 2_4:+17084832 None:intergenic
GGCAATTCTCACGAAACCTA+AGG 0.534563 2_4:+17085768 None:intergenic
CAATTTCGAGCGCGTCGGCG+CGG 0.535476 2_4:+17086049 None:intergenic
ACCGACACCGGAGCCGGCAA+CGG 0.536436 2_4:+17086332 None:intergenic
CCATTCTTCAACACAACAGT+TGG 0.536757 2_4:+17085114 None:intergenic
CATATCGGAAGCTCCTTCAC+CGG 0.540361 2_4:+17085747 None:intergenic
ATTCTCTGCATTGACGGCGC+CGG 0.540611 2_4:-17086459 Msa0318410:CDS
AGCAAGAACACCACCGACAC+CGG 0.542389 2_4:+17086320 None:intergenic
ATCGCCGCGAAATTCTGTTA+CGG 0.550826 2_4:+17086220 None:intergenic
GGTTGTAGTAATACTTAGGA+GGG 0.551803 2_4:+17084833 None:intergenic
TCAGAAACACCGTTGCAAAA+CGG 0.559875 2_4:+17085847 None:intergenic
TTCAAGTTGTTGTTGAACAT+TGG 0.561464 2_4:+17086645 None:intergenic
GGAGATGAAGTTCTAGGAGA+GGG 0.565558 2_4:+17085087 None:intergenic
CAAAATGGAGAAGATTTCGT+AGG 0.566027 2_4:+17086581 None:intergenic
AAGGTGAGATAGTGATTTCG+CGG 0.567024 2_4:+17086416 None:intergenic
TGAGTAACAGCAGTAGCCGT+TGG 0.567616 2_4:+17085895 None:intergenic
TGTTACCGGATTTACGTTTG+AGG 0.569579 2_4:+17086385 None:intergenic
GATTCAATCAAATGGGGTGA+TGG 0.569656 2_4:-17085334 Msa0318410:CDS
CAGAAACTTCAAAGCTTCAT+CGG 0.575680 2_4:+17086251 None:intergenic
GGATTTGGTGGCGGTTTCGG+AGG 0.577646 2_4:-17085274 Msa0318410:CDS
AGCCGCTGGATCAGCTGACG+TGG 0.581310 2_4:+17085990 None:intergenic
GACGGCGCCGGTTACACCGA+CGG 0.582223 2_4:-17086447 Msa0318410:CDS
AGGAGATGAAGTTCTAGGAG+AGG 0.585774 2_4:+17085086 None:intergenic
CATCGCAACACCTCCATCAA+CGG 0.587463 2_4:+17085924 None:intergenic
ATTGAATTGAAGTCCATCGA+TGG 0.601055 2_4:-17085964 Msa0318410:CDS
ACCGTCAATTTCGAGCGCGT+CGG 0.605984 2_4:+17086044 None:intergenic
GCAATTCTCACGAAACCTAA+GGG 0.610307 2_4:+17085769 None:intergenic
ACTTTCTTAATCATCTCAAG+CGG 0.617167 2_4:+17084877 None:intergenic
TAAGGTAAACAAAGGGAAGA+CGG 0.617337 2_4:-17085310 Msa0318410:CDS
CGCGTGACGAGATCGTAGCA+TGG 0.617877 2_4:+17086090 None:intergenic
GTTGCCGGCTCCGGTGTCGG+TGG 0.620706 2_4:-17086330 Msa0318410:CDS
TGCCACGTCAGCTGATCCAG+CGG 0.628488 2_4:-17085992 Msa0318410:CDS
AAGATCTTAGCCGTTGATGG+AGG 0.638110 2_4:-17085934 Msa0318410:CDS
TTTCGCGGCGAGGATGCCGT+CGG 0.641184 2_4:+17086431 None:intergenic
GTAGATTGAACAATTATGTG+CGG 0.642262 2_4:-17085356 Msa0318410:CDS
ACAACCGTAACAGAATTTCG+CGG 0.648787 2_4:-17086224 Msa0318410:CDS
GTGATGGCTAAGGTAAACAA+AGG 0.654646 2_4:-17085318 Msa0318410:CDS
TGATGGCTAAGGTAAACAAA+GGG 0.662128 2_4:-17085317 Msa0318410:CDS
ATTTAAAGGAAGGAAGATCG+TGG 0.667169 2_4:-17085217 Msa0318410:CDS
ACAGAATTTCGCGGCGATCG+GGG 0.670364 2_4:-17086215 Msa0318410:CDS
TCGGCGCGGGAGAAAACGAA+CGG 0.671166 2_4:+17086063 None:intergenic
GAGATAGTGATTTCGCGGCG+AGG 0.680146 2_4:+17086421 None:intergenic
GCTTCATCGGCAGTGAACAG+AGG 0.690278 2_4:+17086264 None:intergenic
TTTCCGGTGAGAAAACTCGC+CGG 0.691056 2_4:+17086187 None:intergenic
TGTTGCGATGAACAATCCAA+CGG 0.695987 2_4:-17085911 Msa0318410:CDS
TGTGCGGATTCAATCAAATG+GGG 0.705308 2_4:-17085340 Msa0318410:CDS
GAAGACGGCGAAAACCGCGT+CGG 0.715374 2_4:-17085295 Msa0318410:CDS
GAGAATTCTGACTTTCCCGG+CGG 0.726321 2_4:+17086476 None:intergenic
AACCGCCACCAAATCCGACG+CGG 0.727539 2_4:+17085281 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAAATAATTATAATGT+AGG + chr2_4:17086568-17086587 None:intergenic 10.0%
!! AAATGAAATAATTATAATGT+AGG + chr2_4:17086568-17086587 None:intergenic 10.0%
!! AAAATAATTCGAAATTGAAT+CGG - chr2_4:17085775-17085794 Msa0318410:CDS 15.0%
!! ATGAATGAATATTATAATGT+AGG - chr2_4:17085961-17085980 Msa0318410:CDS 15.0%
!! AAAATAATTCGAAATTGAAT+CGG - chr2_4:17085775-17085794 Msa0318410:CDS 15.0%
!! ATGAATGAATATTATAATGT+AGG - chr2_4:17085961-17085980 Msa0318410:CDS 15.0%
!!! TAAGAATTTGTTTTCCAAAA+TGG + chr2_4:17084810-17084829 None:intergenic 20.0%
!! TTGGAAAACAAATTCTTATT+CGG - chr2_4:17084812-17084831 Msa0318410:three_prime_UTR 20.0%
!!! GAATTTTTTTCTTACCATAT+CGG + chr2_4:17085644-17085663 None:intergenic 20.0%
!! TTAGACAAATTGAAATTGTT+TGG - chr2_4:17086190-17086209 Msa0318410:CDS 20.0%
!!! TAAAAATTAGATTTTGTCGT+GGG - chr2_4:17086409-17086428 Msa0318410:CDS 20.0%
!!! TTTTGAAACTTAATGTCTTA+TGG - chr2_4:17086459-17086478 Msa0318410:CDS 20.0%
!! GAAATAATTATAATGTAGGT+AGG + chr2_4:17086564-17086583 None:intergenic 20.0%
!!! CTTTTATCTTTGTTTAGTTT+TGG - chr2_4:17086592-17086611 Msa0318410:CDS 20.0%
!!! TAAGAATTTGTTTTCCAAAA+TGG + chr2_4:17084810-17084829 None:intergenic 20.0%
!! TTGGAAAACAAATTCTTATT+CGG - chr2_4:17084812-17084831 Msa0318410:three_prime_UTR 20.0%
!!! GAATTTTTTTCTTACCATAT+CGG + chr2_4:17085644-17085663 None:intergenic 20.0%
!! TTAGACAAATTGAAATTGTT+TGG - chr2_4:17086190-17086209 Msa0318410:CDS 20.0%
!!! TAAAAATTAGATTTTGTCGT+GGG - chr2_4:17086409-17086428 Msa0318410:CDS 20.0%
!!! TTTTGAAACTTAATGTCTTA+TGG - chr2_4:17086459-17086478 Msa0318410:CDS 20.0%
!! GAAATAATTATAATGTAGGT+AGG + chr2_4:17086564-17086583 None:intergenic 20.0%
!!! CTTTTATCTTTGTTTAGTTT+TGG - chr2_4:17086592-17086611 Msa0318410:CDS 20.0%
! AATATGAGAGTTATTGTTAC+CGG + chr2_4:17085005-17085024 None:intergenic 25.0%
!!! AGAATGTGTTTGTTTTTGTT+AGG + chr2_4:17085837-17085856 None:intergenic 25.0%
! ATTTGTAGTGAATAATGAGT+AGG - chr2_4:17085885-17085904 Msa0318410:CDS 25.0%
! TAATGAGTAGGTCTAATTAT+TGG - chr2_4:17085897-17085916 Msa0318410:CDS 25.0%
! AAGAAGACAAAAAAGAAAAG+AGG - chr2_4:17086365-17086384 Msa0318410:CDS 25.0%
!! CTAAAAATTAGATTTTGTCG+TGG - chr2_4:17086408-17086427 Msa0318410:CDS 25.0%
!! AACTTAATGTCTTATGGTTT+TGG - chr2_4:17086465-17086484 Msa0318410:CDS 25.0%
!! ACTTAATGTCTTATGGTTTT+GGG - chr2_4:17086466-17086485 Msa0318410:CDS 25.0%
!!! TTGATAGTGATTTGTTCATA+TGG - chr2_4:17086635-17086654 Msa0318410:CDS 25.0%
!!! TGATAGTGATTTGTTCATAT+GGG - chr2_4:17086636-17086655 Msa0318410:CDS 25.0%
!! GTGTATTGAAACATTGATTA+TGG - chr2_4:17086750-17086769 Msa0318410:five_prime_UTR 25.0%
! AATATGAGAGTTATTGTTAC+CGG + chr2_4:17085005-17085024 None:intergenic 25.0%
!!! AGAATGTGTTTGTTTTTGTT+AGG + chr2_4:17085837-17085856 None:intergenic 25.0%
! ATTTGTAGTGAATAATGAGT+AGG - chr2_4:17085885-17085904 Msa0318410:CDS 25.0%
! TAATGAGTAGGTCTAATTAT+TGG - chr2_4:17085897-17085916 Msa0318410:CDS 25.0%
! AAGAAGACAAAAAAGAAAAG+AGG - chr2_4:17086365-17086384 Msa0318410:CDS 25.0%
!! CTAAAAATTAGATTTTGTCG+TGG - chr2_4:17086408-17086427 Msa0318410:CDS 25.0%
!! AACTTAATGTCTTATGGTTT+TGG - chr2_4:17086465-17086484 Msa0318410:CDS 25.0%
!! ACTTAATGTCTTATGGTTTT+GGG - chr2_4:17086466-17086485 Msa0318410:CDS 25.0%
!!! TTGATAGTGATTTGTTCATA+TGG - chr2_4:17086635-17086654 Msa0318410:CDS 25.0%
!!! TGATAGTGATTTGTTCATAT+GGG - chr2_4:17086636-17086655 Msa0318410:CDS 25.0%
!! GTGTATTGAAACATTGATTA+TGG - chr2_4:17086750-17086769 Msa0318410:five_prime_UTR 25.0%
CAACTCAAATTGCAGAAAAA+TGG - chr2_4:17084688-17084707 Msa0318410:three_prime_UTR 30.0%
!! TTCAAGTTGTTGTTGAACAT+TGG + chr2_4:17084731-17084750 None:intergenic 30.0%
! AAGCTTTTCCGAAAAACATT+CGG - chr2_4:17085220-17085239 Msa0318410:CDS 30.0%
ATAATTCGAAATTGAATCGG+TGG - chr2_4:17085778-17085797 Msa0318410:CDS 30.0%
GTAGATTGAACAATTATGTG+CGG - chr2_4:17086017-17086036 Msa0318410:CDS 30.0%
!! GTTGAGTCAGTCTTATTTAA+AGG - chr2_4:17086142-17086161 Msa0318410:CDS 30.0%
!! AGTCAGTCTTATTTAAAGGA+AGG - chr2_4:17086146-17086165 Msa0318410:CDS 30.0%
GACAAATTGAAATTGTTTGG+TGG - chr2_4:17086193-17086212 Msa0318410:CDS 30.0%
AAGAAAAGAGGAAGATTAGT+AGG - chr2_4:17086377-17086396 Msa0318410:CDS 30.0%
ACTTTCTTAATCATCTCAAG+CGG + chr2_4:17086499-17086518 None:intergenic 30.0%
! CAAAGGATGAATTTTGTACA+AGG - chr2_4:17086665-17086684 Msa0318410:CDS 30.0%
CAACTCAAATTGCAGAAAAA+TGG - chr2_4:17084688-17084707 Msa0318410:three_prime_UTR 30.0%
!! TTCAAGTTGTTGTTGAACAT+TGG + chr2_4:17084731-17084750 None:intergenic 30.0%
! AAGCTTTTCCGAAAAACATT+CGG - chr2_4:17085220-17085239 Msa0318410:CDS 30.0%
ATAATTCGAAATTGAATCGG+TGG - chr2_4:17085778-17085797 Msa0318410:CDS 30.0%
GTAGATTGAACAATTATGTG+CGG - chr2_4:17086017-17086036 Msa0318410:CDS 30.0%
!! GTTGAGTCAGTCTTATTTAA+AGG - chr2_4:17086142-17086161 Msa0318410:CDS 30.0%
!! AGTCAGTCTTATTTAAAGGA+AGG - chr2_4:17086146-17086165 Msa0318410:CDS 30.0%
GACAAATTGAAATTGTTTGG+TGG - chr2_4:17086193-17086212 Msa0318410:CDS 30.0%
AAGAAAAGAGGAAGATTAGT+AGG - chr2_4:17086377-17086396 Msa0318410:CDS 30.0%
ACTTTCTTAATCATCTCAAG+CGG + chr2_4:17086499-17086518 None:intergenic 30.0%
! CAAAGGATGAATTTTGTACA+AGG - chr2_4:17086665-17086684 Msa0318410:CDS 30.0%
!! TGTGTGTTGGTTGTTGAAAA+TGG + chr2_4:17084616-17084635 None:intergenic 35.0%
GAAAGAGAGAATTTGTGTGT+TGG + chr2_4:17084629-17084648 None:intergenic 35.0%
CTCAAATTGCAGAAAAATGG+CGG - chr2_4:17084691-17084710 Msa0318410:three_prime_UTR 35.0%
GAGTTTATCAACTTCGAAGT+TGG + chr2_4:17084771-17084790 None:intergenic 35.0%
CAAAATGGAGAAGATTTCGT+AGG + chr2_4:17084795-17084814 None:intergenic 35.0%
! CTACGAAATCTTCTCCATTT+TGG - chr2_4:17084793-17084812 Msa0318410:three_prime_UTR 35.0%
! AAGCGAATTCTTCGCATTTT+CGG + chr2_4:17084849-17084868 None:intergenic 35.0%
CAGAAACTTCAAAGCTTCAT+CGG + chr2_4:17085125-17085144 None:intergenic 35.0%
TTTCTCACCGGAAACAAAAT+CGG - chr2_4:17085195-17085214 Msa0318410:CDS 35.0%
! TGCATTCTCCGAATGTTTTT+CGG + chr2_4:17085231-17085250 None:intergenic 35.0%
TCGTAGCATGGAATCAAAAT+CGG + chr2_4:17085274-17085293 None:intergenic 35.0%
! TCGATGGACTTCAATTCAAT+AGG + chr2_4:17085409-17085428 None:intergenic 35.0%
ATTGAATTGAAGTCCATCGA+TGG - chr2_4:17085409-17085428 Msa0318410:intron 35.0%
TATGTGCGGATTCAATCAAA+TGG - chr2_4:17086031-17086050 Msa0318410:CDS 35.0%
ATGTGCGGATTCAATCAAAT+GGG - chr2_4:17086032-17086051 Msa0318410:CDS 35.0%
TGATGGCTAAGGTAAACAAA+GGG - chr2_4:17086056-17086075 Msa0318410:CDS 35.0%
TAAGGTAAACAAAGGGAAGA+CGG - chr2_4:17086063-17086082 Msa0318410:CDS 35.0%
ATTTAAAGGAAGGAAGATCG+TGG - chr2_4:17086156-17086175 Msa0318410:CDS 35.0%
AGTTGATTAAGGAAGAAGAG+AGG - chr2_4:17086218-17086237 Msa0318410:CDS 35.0%
GGTTGTAGTAATACTTAGGA+GGG + chr2_4:17086543-17086562 None:intergenic 35.0%
AGGTTGTAGTAATACTTAGG+AGG + chr2_4:17086544-17086563 None:intergenic 35.0%
GGTAGGTTGTAGTAATACTT+AGG + chr2_4:17086547-17086566 None:intergenic 35.0%
! GTTCATATGGGTATTGTCAA+AGG - chr2_4:17086648-17086667 Msa0318410:CDS 35.0%
!! TGTGTGTTGGTTGTTGAAAA+TGG + chr2_4:17084616-17084635 None:intergenic 35.0%
GAAAGAGAGAATTTGTGTGT+TGG + chr2_4:17084629-17084648 None:intergenic 35.0%
CTCAAATTGCAGAAAAATGG+CGG - chr2_4:17084691-17084710 Msa0318410:three_prime_UTR 35.0%
GAGTTTATCAACTTCGAAGT+TGG + chr2_4:17084771-17084790 None:intergenic 35.0%
CAAAATGGAGAAGATTTCGT+AGG + chr2_4:17084795-17084814 None:intergenic 35.0%
! CTACGAAATCTTCTCCATTT+TGG - chr2_4:17084793-17084812 Msa0318410:three_prime_UTR 35.0%
! AAGCGAATTCTTCGCATTTT+CGG + chr2_4:17084849-17084868 None:intergenic 35.0%
CAGAAACTTCAAAGCTTCAT+CGG + chr2_4:17085125-17085144 None:intergenic 35.0%
TTTCTCACCGGAAACAAAAT+CGG - chr2_4:17085195-17085214 Msa0318410:CDS 35.0%
! TGCATTCTCCGAATGTTTTT+CGG + chr2_4:17085231-17085250 None:intergenic 35.0%
TCGTAGCATGGAATCAAAAT+CGG + chr2_4:17085274-17085293 None:intergenic 35.0%
! TCGATGGACTTCAATTCAAT+AGG + chr2_4:17085409-17085428 None:intergenic 35.0%
ATTGAATTGAAGTCCATCGA+TGG - chr2_4:17085409-17085428 Msa0318410:intron 35.0%
TATGTGCGGATTCAATCAAA+TGG - chr2_4:17086031-17086050 Msa0318410:CDS 35.0%
ATGTGCGGATTCAATCAAAT+GGG - chr2_4:17086032-17086051 Msa0318410:CDS 35.0%
TGATGGCTAAGGTAAACAAA+GGG - chr2_4:17086056-17086075 Msa0318410:CDS 35.0%
TAAGGTAAACAAAGGGAAGA+CGG - chr2_4:17086063-17086082 Msa0318410:CDS 35.0%
ATTTAAAGGAAGGAAGATCG+TGG - chr2_4:17086156-17086175 Msa0318410:CDS 35.0%
AGTTGATTAAGGAAGAAGAG+AGG - chr2_4:17086218-17086237 Msa0318410:CDS 35.0%
GGTTGTAGTAATACTTAGGA+GGG + chr2_4:17086543-17086562 None:intergenic 35.0%
AGGTTGTAGTAATACTTAGG+AGG + chr2_4:17086544-17086563 None:intergenic 35.0%
GGTAGGTTGTAGTAATACTT+AGG + chr2_4:17086547-17086566 None:intergenic 35.0%
! GTTCATATGGGTATTGTCAA+AGG - chr2_4:17086648-17086667 Msa0318410:CDS 35.0%
!! ATTCTTCGCATTTTCGGTGT+CGG + chr2_4:17084843-17084862 None:intergenic 40.0%
GTCAGAATTCTCTGCATTGA+CGG - chr2_4:17084908-17084927 Msa0318410:three_prime_UTR 40.0%
AAGGTGAGATAGTGATTTCG+CGG + chr2_4:17084960-17084979 None:intergenic 40.0%
TGTTACCGGATTTACGTTTG+AGG + chr2_4:17084991-17085010 None:intergenic 40.0%
ACAACCGTAACAGAATTTCG+CGG - chr2_4:17085149-17085168 Msa0318410:CDS 40.0%
!! AGCTTCTCCGATTTTGTTTC+CGG + chr2_4:17085205-17085224 None:intergenic 40.0%
TGTTGCGATGAACAATCCAA+CGG - chr2_4:17085462-17085481 Msa0318410:intron 40.0%
! CATGAGTTTCCGTTTTGCAA+CGG - chr2_4:17085517-17085536 Msa0318410:intron 40.0%
TCAGAAACACCGTTGCAAAA+CGG + chr2_4:17085529-17085548 None:intergenic 40.0%
! CAACGGTGTTTCTGATTTGT+TGG - chr2_4:17085534-17085553 Msa0318410:intron 40.0%
!! GATTTGTTGGTGCTTTCTCT+TGG - chr2_4:17085547-17085566 Msa0318410:intron 40.0%
! TTGGTGCTTTCTCTTGGTAA+CGG - chr2_4:17085553-17085572 Msa0318410:intron 40.0%
GAAACCTAAGGGAGACTTAA+CGG + chr2_4:17085596-17085615 None:intergenic 40.0%
GCAATTCTCACGAAACCTAA+GGG + chr2_4:17085607-17085626 None:intergenic 40.0%
TTAGGTTTCGTGAGAATTGC+CGG - chr2_4:17085607-17085626 Msa0318410:intron 40.0%
TGAATCGGTGGTTACTAGTT+AGG - chr2_4:17085790-17085809 Msa0318410:CDS 40.0%
GGTTGATCAAGCTGTATCAA+TGG - chr2_4:17085982-17086001 Msa0318410:CDS 40.0%
CAAGCTGTATCAATGGCATT+TGG - chr2_4:17085989-17086008 Msa0318410:CDS 40.0%
TGTGCGGATTCAATCAAATG+GGG - chr2_4:17086033-17086052 Msa0318410:CDS 40.0%
GATTCAATCAAATGGGGTGA+TGG - chr2_4:17086039-17086058 Msa0318410:CDS 40.0%
GTGATGGCTAAGGTAAACAA+AGG - chr2_4:17086055-17086074 Msa0318410:CDS 40.0%
! GTTTGGTGGAGAGTTGATTA+AGG - chr2_4:17086207-17086226 Msa0318410:CDS 40.0%
CCATTCTTCAACACAACAGT+TGG + chr2_4:17086262-17086281 None:intergenic 40.0%
CCAACTGTTGTGTTGAAGAA+TGG - chr2_4:17086259-17086278 Msa0318410:CDS 40.0%
!! ATTCTTCGCATTTTCGGTGT+CGG + chr2_4:17084843-17084862 None:intergenic 40.0%
GTCAGAATTCTCTGCATTGA+CGG - chr2_4:17084908-17084927 Msa0318410:three_prime_UTR 40.0%
AAGGTGAGATAGTGATTTCG+CGG + chr2_4:17084960-17084979 None:intergenic 40.0%
TGTTACCGGATTTACGTTTG+AGG + chr2_4:17084991-17085010 None:intergenic 40.0%
ACAACCGTAACAGAATTTCG+CGG - chr2_4:17085149-17085168 Msa0318410:CDS 40.0%
!! AGCTTCTCCGATTTTGTTTC+CGG + chr2_4:17085205-17085224 None:intergenic 40.0%
TGTTGCGATGAACAATCCAA+CGG - chr2_4:17085462-17085481 Msa0318410:intron 40.0%
! CATGAGTTTCCGTTTTGCAA+CGG - chr2_4:17085517-17085536 Msa0318410:intron 40.0%
TCAGAAACACCGTTGCAAAA+CGG + chr2_4:17085529-17085548 None:intergenic 40.0%
! CAACGGTGTTTCTGATTTGT+TGG - chr2_4:17085534-17085553 Msa0318410:intron 40.0%
!! GATTTGTTGGTGCTTTCTCT+TGG - chr2_4:17085547-17085566 Msa0318410:intron 40.0%
! TTGGTGCTTTCTCTTGGTAA+CGG - chr2_4:17085553-17085572 Msa0318410:intron 40.0%
GAAACCTAAGGGAGACTTAA+CGG + chr2_4:17085596-17085615 None:intergenic 40.0%
GCAATTCTCACGAAACCTAA+GGG + chr2_4:17085607-17085626 None:intergenic 40.0%
TTAGGTTTCGTGAGAATTGC+CGG - chr2_4:17085607-17085626 Msa0318410:intron 40.0%
TGAATCGGTGGTTACTAGTT+AGG - chr2_4:17085790-17085809 Msa0318410:CDS 40.0%
GGTTGATCAAGCTGTATCAA+TGG - chr2_4:17085982-17086001 Msa0318410:CDS 40.0%
CAAGCTGTATCAATGGCATT+TGG - chr2_4:17085989-17086008 Msa0318410:CDS 40.0%
TGTGCGGATTCAATCAAATG+GGG - chr2_4:17086033-17086052 Msa0318410:CDS 40.0%
GATTCAATCAAATGGGGTGA+TGG - chr2_4:17086039-17086058 Msa0318410:CDS 40.0%
GTGATGGCTAAGGTAAACAA+AGG - chr2_4:17086055-17086074 Msa0318410:CDS 40.0%
! GTTTGGTGGAGAGTTGATTA+AGG - chr2_4:17086207-17086226 Msa0318410:CDS 40.0%
CCATTCTTCAACACAACAGT+TGG + chr2_4:17086262-17086281 None:intergenic 40.0%
CCAACTGTTGTGTTGAAGAA+TGG - chr2_4:17086259-17086278 Msa0318410:CDS 40.0%
GCAGAGAATTCTGACTTTCC+CGG + chr2_4:17084903-17084922 None:intergenic 45.0%
! TACGTTTGAGGCAGGATTCA+AGG + chr2_4:17084979-17084998 None:intergenic 45.0%
TCCTGCCTCAAACGTAAATC+CGG - chr2_4:17084983-17085002 Msa0318410:three_prime_UTR 45.0%
! CTTTTCACCCGTGGAAAAGA+CGG - chr2_4:17085082-17085101 Msa0318410:CDS 45.0%
! AGGTAATCCGTCTTTTCCAC+GGG + chr2_4:17085092-17085111 None:intergenic 45.0%
! GAGGTAATCCGTCTTTTCCA+CGG + chr2_4:17085093-17085112 None:intergenic 45.0%
ATCGCCGCGAAATTCTGTTA+CGG + chr2_4:17085156-17085175 None:intergenic 45.0%
TAACAGAATTTCGCGGCGAT+CGG - chr2_4:17085156-17085175 Msa0318410:CDS 45.0%
TTCAATTCAATAGGAGCCGC+TGG + chr2_4:17085400-17085419 None:intergenic 45.0%
GATCTTCGTCTTTCCATCGA+TGG + chr2_4:17085425-17085444 None:intergenic 45.0%
ACGAAGATCTTAGCCGTTGA+TGG - chr2_4:17085436-17085455 Msa0318410:intron 45.0%
! AAGATCTTAGCCGTTGATGG+AGG - chr2_4:17085439-17085458 Msa0318410:intron 45.0%
!! TTCTCTTGGTAACGGAGAGT+TGG - chr2_4:17085561-17085580 Msa0318410:intron 45.0%
GGCAATTCTCACGAAACCTA+AGG + chr2_4:17085608-17085627 None:intergenic 45.0%
! ATCAAATGGGGTGATGGCTA+AGG - chr2_4:17086045-17086064 Msa0318410:CDS 45.0%
!! GGAGATGAAGTTCTAGGAGA+GGG + chr2_4:17086289-17086308 None:intergenic 45.0%
!! AGGAGATGAAGTTCTAGGAG+AGG + chr2_4:17086290-17086309 None:intergenic 45.0%
CTCCTAGAACTTCATCTCCT+AGG - chr2_4:17086290-17086309 Msa0318410:CDS 45.0%
GTCCTAGGAGATGAAGTTCT+AGG + chr2_4:17086295-17086314 None:intergenic 45.0%
GTAGTAGCTGATGAAGTCCT+AGG + chr2_4:17086310-17086329 None:intergenic 45.0%
GCAGAGAATTCTGACTTTCC+CGG + chr2_4:17084903-17084922 None:intergenic 45.0%
! TACGTTTGAGGCAGGATTCA+AGG + chr2_4:17084979-17084998 None:intergenic 45.0%
TCCTGCCTCAAACGTAAATC+CGG - chr2_4:17084983-17085002 Msa0318410:three_prime_UTR 45.0%
! CTTTTCACCCGTGGAAAAGA+CGG - chr2_4:17085082-17085101 Msa0318410:CDS 45.0%
! AGGTAATCCGTCTTTTCCAC+GGG + chr2_4:17085092-17085111 None:intergenic 45.0%
! GAGGTAATCCGTCTTTTCCA+CGG + chr2_4:17085093-17085112 None:intergenic 45.0%
ATCGCCGCGAAATTCTGTTA+CGG + chr2_4:17085156-17085175 None:intergenic 45.0%
TAACAGAATTTCGCGGCGAT+CGG - chr2_4:17085156-17085175 Msa0318410:CDS 45.0%
TTCAATTCAATAGGAGCCGC+TGG + chr2_4:17085400-17085419 None:intergenic 45.0%
GATCTTCGTCTTTCCATCGA+TGG + chr2_4:17085425-17085444 None:intergenic 45.0%
ACGAAGATCTTAGCCGTTGA+TGG - chr2_4:17085436-17085455 Msa0318410:intron 45.0%
! AAGATCTTAGCCGTTGATGG+AGG - chr2_4:17085439-17085458 Msa0318410:intron 45.0%
!! TTCTCTTGGTAACGGAGAGT+TGG - chr2_4:17085561-17085580 Msa0318410:intron 45.0%
GGCAATTCTCACGAAACCTA+AGG + chr2_4:17085608-17085627 None:intergenic 45.0%
! ATCAAATGGGGTGATGGCTA+AGG - chr2_4:17086045-17086064 Msa0318410:CDS 45.0%
!! GGAGATGAAGTTCTAGGAGA+GGG + chr2_4:17086289-17086308 None:intergenic 45.0%
!! AGGAGATGAAGTTCTAGGAG+AGG + chr2_4:17086290-17086309 None:intergenic 45.0%
CTCCTAGAACTTCATCTCCT+AGG - chr2_4:17086290-17086309 Msa0318410:CDS 45.0%
GTCCTAGGAGATGAAGTTCT+AGG + chr2_4:17086295-17086314 None:intergenic 45.0%
GTAGTAGCTGATGAAGTCCT+AGG + chr2_4:17086310-17086329 None:intergenic 45.0%
AAACAAGCCAAAAACGCCGC+CGG - chr2_4:17084881-17084900 Msa0318410:three_prime_UTR 50.0%
GAGAATTCTGACTTTCCCGG+CGG + chr2_4:17084900-17084919 None:intergenic 50.0%
! ACCGGATTTACGTTTGAGGC+AGG + chr2_4:17084987-17085006 None:intergenic 50.0%
AACAGAATTTCGCGGCGATC+GGG - chr2_4:17085157-17085176 Msa0318410:CDS 50.0%
TTTCCGGTGAGAAAACTCGC+CGG + chr2_4:17085189-17085208 None:intergenic 50.0%
CATCGCAACACCTCCATCAA+CGG + chr2_4:17085452-17085471 None:intergenic 50.0%
TGAGTAACAGCAGTAGCCGT+TGG + chr2_4:17085481-17085500 None:intergenic 50.0%
AACGCCGTTAAGTCTCCCTT+AGG - chr2_4:17085589-17085608 Msa0318410:intron 50.0%
TTCGTGAGAATTGCCGGTGA+AGG - chr2_4:17085613-17085632 Msa0318410:intron 50.0%
CATATCGGAAGCTCCTTCAC+CGG + chr2_4:17085629-17085648 None:intergenic 50.0%
AAACAAGCCAAAAACGCCGC+CGG - chr2_4:17084881-17084900 Msa0318410:three_prime_UTR 50.0%
GAGAATTCTGACTTTCCCGG+CGG + chr2_4:17084900-17084919 None:intergenic 50.0%
! ACCGGATTTACGTTTGAGGC+AGG + chr2_4:17084987-17085006 None:intergenic 50.0%
AACAGAATTTCGCGGCGATC+GGG - chr2_4:17085157-17085176 Msa0318410:CDS 50.0%
TTTCCGGTGAGAAAACTCGC+CGG + chr2_4:17085189-17085208 None:intergenic 50.0%
CATCGCAACACCTCCATCAA+CGG + chr2_4:17085452-17085471 None:intergenic 50.0%
TGAGTAACAGCAGTAGCCGT+TGG + chr2_4:17085481-17085500 None:intergenic 50.0%
AACGCCGTTAAGTCTCCCTT+AGG - chr2_4:17085589-17085608 Msa0318410:intron 50.0%
TTCGTGAGAATTGCCGGTGA+AGG - chr2_4:17085613-17085632 Msa0318410:intron 50.0%
CATATCGGAAGCTCCTTCAC+CGG + chr2_4:17085629-17085648 None:intergenic 50.0%
AACAAGCCAAAAACGCCGCC+GGG - chr2_4:17084882-17084901 Msa0318410:three_prime_UTR 55.0%
! ATTCTCTGCATTGACGGCGC+CGG - chr2_4:17084914-17084933 Msa0318410:three_prime_UTR 55.0%
GAGATAGTGATTTCGCGGCG+AGG + chr2_4:17084955-17084974 None:intergenic 55.0%
GATTTCTTCGACGCCGTTGC+CGG - chr2_4:17085028-17085047 Msa0318410:exon 55.0%
AGCAAGAACACCACCGACAC+CGG + chr2_4:17085056-17085075 None:intergenic 55.0%
! GCTGCACTTCTTTTCACCCG+TGG - chr2_4:17085073-17085092 Msa0318410:CDS 55.0%
GCTTCATCGGCAGTGAACAG+AGG + chr2_4:17085112-17085131 None:intergenic 55.0%
ACAGAATTTCGCGGCGATCG+GGG - chr2_4:17085158-17085177 Msa0318410:CDS 55.0%
! TCTCCGGCGAGTTTTCTCAC+CGG - chr2_4:17085183-17085202 Msa0318410:CDS 55.0%
ACCGTCAATTTCGAGCGCGT+CGG + chr2_4:17085332-17085351 None:intergenic 55.0%
CGGTGAAGGAGCTTCCGATA+TGG - chr2_4:17085627-17085646 Msa0318410:intron 55.0%
GAAAACCGCGTCGGATTTGG+TGG - chr2_4:17086087-17086106 Msa0318410:CDS 55.0%
!! GTCGGATTTGGTGGCGGTTT+CGG - chr2_4:17086096-17086115 Msa0318410:CDS 55.0%
GGCGGTTTCGGAGGAAATGT+TGG - chr2_4:17086108-17086127 Msa0318410:CDS 55.0%
AACAAGCCAAAAACGCCGCC+GGG - chr2_4:17084882-17084901 Msa0318410:three_prime_UTR 55.0%
! ATTCTCTGCATTGACGGCGC+CGG - chr2_4:17084914-17084933 Msa0318410:three_prime_UTR 55.0%
GAGATAGTGATTTCGCGGCG+AGG + chr2_4:17084955-17084974 None:intergenic 55.0%
GATTTCTTCGACGCCGTTGC+CGG - chr2_4:17085028-17085047 Msa0318410:exon 55.0%
AGCAAGAACACCACCGACAC+CGG + chr2_4:17085056-17085075 None:intergenic 55.0%
! GCTGCACTTCTTTTCACCCG+TGG - chr2_4:17085073-17085092 Msa0318410:CDS 55.0%
GCTTCATCGGCAGTGAACAG+AGG + chr2_4:17085112-17085131 None:intergenic 55.0%
ACAGAATTTCGCGGCGATCG+GGG - chr2_4:17085158-17085177 Msa0318410:CDS 55.0%
! TCTCCGGCGAGTTTTCTCAC+CGG - chr2_4:17085183-17085202 Msa0318410:CDS 55.0%
ACCGTCAATTTCGAGCGCGT+CGG + chr2_4:17085332-17085351 None:intergenic 55.0%
CGGTGAAGGAGCTTCCGATA+TGG - chr2_4:17085627-17085646 Msa0318410:intron 55.0%
GAAAACCGCGTCGGATTTGG+TGG - chr2_4:17086087-17086106 Msa0318410:CDS 55.0%
!! GTCGGATTTGGTGGCGGTTT+CGG - chr2_4:17086096-17086115 Msa0318410:CDS 55.0%
GGCGGTTTCGGAGGAAATGT+TGG - chr2_4:17086108-17086127 Msa0318410:CDS 55.0%
! GACTTTCCCGGCGGCGTTTT+TGG + chr2_4:17084891-17084910 None:intergenic 60.0%
GAGGATGCCGTCGGTGTAAC+CGG + chr2_4:17084936-17084955 None:intergenic 60.0%
CGCGTGACGAGATCGTAGCA+TGG + chr2_4:17085286-17085305 None:intergenic 60.0%
TCGGCGCGGGAGAAAACGAA+CGG + chr2_4:17085313-17085332 None:intergenic 60.0%
GCCGACGCGCTCGAAATTGA+CGG - chr2_4:17085328-17085347 Msa0318410:CDS 60.0%
TGCCACGTCAGCTGATCCAG+CGG - chr2_4:17085381-17085400 Msa0318410:CDS 60.0%
GAAGACGGCGAAAACCGCGT+CGG - chr2_4:17086078-17086097 Msa0318410:CDS 60.0%
GGCGAAAACCGCGTCGGATT+TGG - chr2_4:17086084-17086103 Msa0318410:CDS 60.0%
!! AACCGCGTCGGATTTGGTGG+CGG - chr2_4:17086090-17086109 Msa0318410:CDS 60.0%
AACCGCCACCAAATCCGACG+CGG + chr2_4:17086095-17086114 None:intergenic 60.0%
!! GGATTTGGTGGCGGTTTCGG+AGG - chr2_4:17086099-17086118 Msa0318410:CDS 60.0%
! GACTTTCCCGGCGGCGTTTT+TGG + chr2_4:17084891-17084910 None:intergenic 60.0%
GAGGATGCCGTCGGTGTAAC+CGG + chr2_4:17084936-17084955 None:intergenic 60.0%
CGCGTGACGAGATCGTAGCA+TGG + chr2_4:17085286-17085305 None:intergenic 60.0%
TCGGCGCGGGAGAAAACGAA+CGG + chr2_4:17085313-17085332 None:intergenic 60.0%
GCCGACGCGCTCGAAATTGA+CGG - chr2_4:17085328-17085347 Msa0318410:CDS 60.0%
TGCCACGTCAGCTGATCCAG+CGG - chr2_4:17085381-17085400 Msa0318410:CDS 60.0%
GAAGACGGCGAAAACCGCGT+CGG - chr2_4:17086078-17086097 Msa0318410:CDS 60.0%
GGCGAAAACCGCGTCGGATT+TGG - chr2_4:17086084-17086103 Msa0318410:CDS 60.0%
!! AACCGCGTCGGATTTGGTGG+CGG - chr2_4:17086090-17086109 Msa0318410:CDS 60.0%
AACCGCCACCAAATCCGACG+CGG + chr2_4:17086095-17086114 None:intergenic 60.0%
!! GGATTTGGTGGCGGTTTCGG+AGG - chr2_4:17086099-17086118 Msa0318410:CDS 60.0%
TTTCGCGGCGAGGATGCCGT+CGG + chr2_4:17084945-17084964 None:intergenic 65.0%
AACACCACCGACACCGGAGC+CGG + chr2_4:17085050-17085069 None:intergenic 65.0%
! AATTTCGAGCGCGTCGGCGC+GGG + chr2_4:17085326-17085345 None:intergenic 65.0%
! CAATTTCGAGCGCGTCGGCG+CGG + chr2_4:17085327-17085346 None:intergenic 65.0%
AGCCGCTGGATCAGCTGACG+TGG + chr2_4:17085386-17085405 None:intergenic 65.0%
TTTCGCGGCGAGGATGCCGT+CGG + chr2_4:17084945-17084964 None:intergenic 65.0%
AACACCACCGACACCGGAGC+CGG + chr2_4:17085050-17085069 None:intergenic 65.0%
! AATTTCGAGCGCGTCGGCGC+GGG + chr2_4:17085326-17085345 None:intergenic 65.0%
! CAATTTCGAGCGCGTCGGCG+CGG + chr2_4:17085327-17085346 None:intergenic 65.0%
AGCCGCTGGATCAGCTGACG+TGG + chr2_4:17085386-17085405 None:intergenic 65.0%
!! GACGGCGCCGGTTACACCGA+CGG - chr2_4:17084926-17084945 Msa0318410:three_prime_UTR 70.0%
!! TTCGACGCCGTTGCCGGCTC+CGG - chr2_4:17085034-17085053 Msa0318410:exon 70.0%
ACCGACACCGGAGCCGGCAA+CGG + chr2_4:17085044-17085063 None:intergenic 70.0%
CGCGGCGATCGGGGATTCTC+CGG - chr2_4:17085167-17085186 Msa0318410:CDS 70.0%
!! GACGGCGCCGGTTACACCGA+CGG - chr2_4:17084926-17084945 Msa0318410:three_prime_UTR 70.0%
!! TTCGACGCCGTTGCCGGCTC+CGG - chr2_4:17085034-17085053 Msa0318410:exon 70.0%
ACCGACACCGGAGCCGGCAA+CGG + chr2_4:17085044-17085063 None:intergenic 70.0%
CGCGGCGATCGGGGATTCTC+CGG - chr2_4:17085167-17085186 Msa0318410:CDS 70.0%
!! GCCGTTGCCGGCTCCGGTGT+CGG - chr2_4:17085040-17085059 Msa0318410:CDS 75.0%
!! GTTGCCGGCTCCGGTGTCGG+TGG - chr2_4:17085043-17085062 Msa0318410:CDS 75.0%
!! GCCGTTGCCGGCTCCGGTGT+CGG - chr2_4:17085040-17085059 Msa0318410:CDS 75.0%
!! GTTGCCGGCTCCGGTGTCGG+TGG - chr2_4:17085043-17085062 Msa0318410:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 17084597 17086798 17084597 ID=Msa0318410;Name=Msa0318410
chr2_4 mRNA 17084597 17086798 17084597 ID=Msa0318410-mRNA-1;Parent=Msa0318410;Name=Msa0318410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|1|1|2|441|438
chr2_4 exon 17084597 17085412 17084597 ID=Msa0318410-mRNA-1:exon:6396;Parent=Msa0318410-mRNA-1
chr2_4 exon 17085747 17086798 17085747 ID=Msa0318410-mRNA-1:exon:6395;Parent=Msa0318410-mRNA-1
chr2_4 five_prime_UTR 17086689 17086798 17086689 ID=Msa0318410-mRNA-1:five_prime_utr;Parent=Msa0318410-mRNA-1
chr2_4 CDS 17085747 17086688 17085747 ID=Msa0318410-mRNA-1:cds;Parent=Msa0318410-mRNA-1
chr2_4 CDS 17085038 17085412 17085038 ID=Msa0318410-mRNA-1:cds;Parent=Msa0318410-mRNA-1
chr2_4 three_prime_UTR 17084597 17085037 17084597 ID=Msa0318410-mRNA-1:three_prime_utr;Parent=Msa0318410-mRNA-1
Gene Sequence

>Msa0318410

ATGGCGGCACTGTCAACATCACCAATGTTCAACAACAACTTGAACTTGAACACAATTGACACCAACTTCGAAGTTGATAAACTCACCTACGAAATCTTCTCCATTTTGGAAAACAAATTCTTATTCGGATACACCGACACCGAAAATGCGAAGAATTCGCTTTCTATTGATGTCAAACAAGCCAAAAACGCCGCCGGGAAAGTCAGAATTCTCTGCATTGACGGCGCCGGTTACACCGACGGCATCCTCGCCGCGAAATCACTATCTCACCTTGAATCCTGCCTCAAACGTAAATCCGGTAACAATAACTCTCATATTGCTGATTTCTTCGACGCCGTTGCCGGCTCCGGTGTCGGTGGTGTTCTTGCTGCACTTCTTTTCACCCGTGGAAAAGACGGATTACCTCTGTTCACTGCCGATGAAGCTTTGAAGTTTCTGATCAACAACCGTAACAGAATTTCGCGGCGATCGGGGATTCTCCGGCGAGTTTTCTCACCGGAAACAAAATCGGAGAAGCTTTTCCGAAAAACATTCGGAGAATGCACACTGAAAGACACATTGAAACCGATTTTGATTCCATGCTACGATCTCGTCACGCGCGCACCGTTCGTTTTCTCCCGCGCCGACGCGCTCGAAATTGACGGTTACGATTTCAAGATGCGCGATGTGTGTGCTGCCACGTCAGCTGATCCAGCGGCTCCTATTGAATTGAAGTCCATCGATGGAAAGACGAAGATCTTAGCCGTTGATGGAGGTGTTGCGATGAACAATCCAACGGCTACTGCTGTTACTCACGTGCTTAATAATAAACATGAGTTTCCGTTTTGCAACGGTGTTTCTGATTTGTTGGTGCTTTCTCTTGGTAACGGAGAGTTGGACTTTAACGCCGTTAAGTCTCCCTTAGGTTTCGTGAGAATTGCCGGTGAAGGAGCTTCCGATATGGTTGATCAAGCTGTATCAATGGCATTTGGAGAATGTAGATTGAACAATTATGTGCGGATTCAATCAAATGGGGTGATGGCTAAGGTAAACAAAGGGAAGACGGCGAAAACCGCGTCGGATTTGGTGGCGGTTTCGGAGGAAATGTTGGCACAGAAGAATGTTGAGTCAGTCTTATTTAAAGGAAGGAAGATCGTGGAGAACACAAATTTAGACAAATTGAAATTGTTTGGTGGAGAGTTGATTAAGGAAGAAGAGAGGAGAAAAACTAGTATTTTACCAACTGTTGTGTTGAAGAATGGATCTCCCTCTCCTAGAACTTCATCTCCTAGGACTTCATCAGCTACTACTTTGTCAACTTCATCTTCAAGCTCTTAG
Protein sequence

>Msa0318410

MAALSTSPMFNNNLNLNTIDTNFEVDKLTYEIFSILENKFLFGYTDTENAKNSLSIDVKQAKNAAGKVRILCIDGAGYTDGILAAKSLSHLESCLKRKSGNNNSHIADFFDAVAGSGVGGVLAALLFTRGKDGLPLFTADEALKFLINNRNRISRRSGILRRVFSPETKSEKLFRKTFGECTLKDTLKPILIPCYDLVTRAPFVFSRADALEIDGYDFKMRDVCAATSADPAAPIELKSIDGKTKILAVDGGVAMNNPTATAVTHVLNNKHEFPFCNGVSDLLVLSLGNGELDFNAVKSPLGFVRIAGEGASDMVDQAVSMAFGECRLNNYVRIQSNGVMAKVNKGKTAKTASDLVAVSEEMLAQKNVESVLFKGRKIVENTNLDKLKLFGGELIKEEERRKTSILPTVVLKNGSPSPRTSSPRTSSATTLSTSSSSS*