AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0328550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328550 MtrunA17_Chr2g0309891 88.278 273 12 1 1 253 1 273 2.82e-180 498
Msa0328550 MtrunA17_Chr3g0109821 67.857 168 34 1 1 148 1 168 4.12e-78 248
Msa0328550 MtrunA17_Chr5g0433781 61.905 189 52 2 1 169 1 189 4.48e-78 248
Msa0328550 MtrunA17_Chr6g0481091 67.308 156 32 1 1 137 1 156 2.01e-75 229
Msa0328550 MtrunA17_Chr5g0400461 45.089 224 92 3 1 201 1 216 3.24e-61 196
Msa0328550 MtrunA17_Chr4g0054791 55.346 159 49 2 1 137 1 159 1.01e-56 184
Msa0328550 MtrunA17_Chr4g0056541 50.307 163 63 2 6 150 7 169 9.54e-55 180
Msa0328550 MtrunA17_Chr8g0372121 48.485 165 67 2 1 147 1 165 2.54e-54 177
Msa0328550 MtrunA17_Chr4g0018391 51.316 152 56 2 6 139 7 158 1.60e-53 176
Msa0328550 MtrunA17_Chr1g0200561 54.000 150 51 2 6 137 19 168 2.24e-53 176
Msa0328550 MtrunA17_Chr5g0405211 52.667 150 53 2 6 137 8 157 6.43e-53 175
Msa0328550 MtrunA17_Chr4g0017921 53.020 149 53 2 6 137 8 156 7.13e-53 175
Msa0328550 MtrunA17_Chr1g0197361 50.847 177 67 3 8 165 10 185 2.15e-52 179
Msa0328550 MtrunA17_Chr3g0092671 50.562 178 68 3 8 166 7 183 2.99e-52 177
Msa0328550 MtrunA17_Chr1g0201021 43.805 226 99 5 4 209 17 234 3.65e-52 178
Msa0328550 MtrunA17_Chr2g0318081 50.641 156 56 2 1 137 11 164 3.79e-52 173
Msa0328550 MtrunA17_Chr2g0309331 50.980 153 56 3 4 137 8 160 5.68e-52 172
Msa0328550 MtrunA17_Chr1g0197351 51.572 159 52 1 5 138 41 199 1.24e-51 174
Msa0328550 MtrunA17_Chr5g0428991 43.333 240 97 5 6 218 25 252 1.33e-51 177
Msa0328550 MtrunA17_Chr4g0042561 50.314 159 54 2 2 137 5 161 3.83e-51 168
Msa0328550 MtrunA17_Chr3g0124761 42.672 232 95 6 4 205 5 228 4.72e-51 168
Msa0328550 MtrunA17_Chr6g0453451 53.896 154 48 3 6 138 20 171 7.57e-51 169
Msa0328550 MtrunA17_Chr5g0398971 51.299 154 55 3 6 139 7 160 7.87e-51 169
Msa0328550 MtrunA17_Chr8g0384721 37.681 276 111 8 4 245 5 253 8.38e-51 167
Msa0328550 MtrunA17_Chr8g0359921 47.977 173 63 3 1 148 9 179 1.16e-50 168
Msa0328550 MtrunA17_Chr2g0316971 56.081 148 61 2 6 151 23 168 2.55e-50 169
Msa0328550 MtrunA17_Chr7g0252971 48.485 165 51 3 6 138 8 170 3.45e-50 167
Msa0328550 MtrunA17_Chr3g0128151 53.947 152 51 1 5 137 21 172 3.91e-50 173
Msa0328550 MtrunA17_Chr3g0130731 50.625 160 54 3 4 141 5 161 4.37e-50 166
Msa0328550 MtrunA17_Chr5g0417791 50.318 157 53 2 4 137 1 155 6.63e-50 164
Msa0328550 MtrunA17_Chr6g0453131 49.383 162 51 3 6 138 15 174 3.35e-49 166
Msa0328550 MtrunA17_Chr6g0484441 52.318 151 53 2 6 139 5 153 3.45e-49 164
Msa0328550 MtrunA17_Chr3g0130101 49.664 149 56 1 8 137 9 157 3.84e-49 165
Msa0328550 MtrunA17_Chr2g0318101 45.604 182 63 4 6 153 15 194 5.37e-49 165
Msa0328550 MtrunA17_Chr8g0364791 49.359 156 60 1 1 137 1 156 7.03e-49 166
Msa0328550 MtrunA17_Chr3g0091921 39.754 244 102 6 4 223 14 236 7.77e-49 163
Msa0328550 MtrunA17_Chr4g0060931 50.000 156 55 2 4 138 15 168 8.59e-49 164
Msa0328550 MtrunA17_Chr3g0128111 50.676 148 54 1 9 137 45 192 1.02e-48 160
Msa0328550 MtrunA17_Chr8g0346001 45.562 169 59 3 6 143 15 181 6.60e-48 164
Msa0328550 MtrunA17_Chr2g0326361 51.773 141 62 3 5 141 13 151 7.72e-48 161
Msa0328550 MtrunA17_Chr6g0461661 36.885 244 127 6 3 227 15 250 1.31e-47 162
Msa0328550 MtrunA17_Chr4g0047841 56.911 123 49 2 6 126 15 135 3.90e-47 159
Msa0328550 MtrunA17_Chr2g0312321 50.610 164 57 3 1 144 6 165 4.11e-47 158
Msa0328550 MtrunA17_Chr1g0147421 53.247 154 50 5 5 138 26 177 9.76e-47 159
Msa0328550 MtrunA17_Chr1g0183741 51.333 150 54 3 5 137 9 156 2.12e-46 155
Msa0328550 MtrunA17_Chr8g0361731 46.584 161 54 3 8 138 16 174 2.26e-46 159
Msa0328550 MtrunA17_Chr5g0417001 46.875 160 54 3 8 138 16 173 4.23e-46 158
Msa0328550 MtrunA17_Chr3g0139331 51.634 153 53 3 5 138 10 160 6.13e-46 156
Msa0328550 MtrunA17_Chr7g0261411 52.027 148 52 3 5 135 9 154 1.00e-45 154
Msa0328550 MtrunA17_Chr8g0384201 46.795 156 64 1 1 137 1 156 1.11e-45 159
Msa0328550 MtrunA17_Chr7g0214071 49.704 169 60 5 6 155 15 177 1.21e-45 153
Msa0328550 MtrunA17_Chr7g0253011 56.693 127 49 2 4 126 15 139 4.16e-45 155
Msa0328550 MtrunA17_Chr4g0076731 48.322 149 57 3 8 138 56 202 7.96e-45 155
Msa0328550 MtrunA17_Chr3g0144271 59.677 124 45 3 6 126 23 144 3.80e-44 154
Msa0328550 MtrunA17_Chr7g0217721 56.780 118 49 1 9 126 22 137 1.88e-42 147
Msa0328550 MtrunA17_Chr7g0263931 52.000 125 56 2 4 126 9 131 2.31e-42 147
Msa0328550 MtrunA17_Chr2g0311651 36.161 224 101 5 8 193 24 243 6.98e-40 140
Msa0328550 MtrunA17_Chr7g0217711 54.237 118 52 1 9 126 22 137 7.91e-40 135
Msa0328550 MtrunA17_Chr2g0311661 52.033 123 54 2 8 126 23 144 2.42e-39 138
Msa0328550 MtrunA17_Chr8g0345671 54.032 124 53 3 6 126 11 133 5.15e-39 139
Msa0328550 MtrunA17_Chr4g0038751 39.394 165 78 4 8 152 17 179 2.63e-37 133
Msa0328550 MtrunA17_Chr8g0345711 52.000 125 54 4 6 126 12 134 5.58e-37 128
Msa0328550 MtrunA17_Chr5g0442771 40.994 161 62 3 8 137 20 178 3.63e-36 130
Msa0328550 MtrunA17_Chr8g0345691 51.613 124 56 3 6 126 12 134 7.48e-36 132
Msa0328550 MtrunA17_Chr2g0321741 49.600 125 50 2 26 138 12 135 5.46e-35 128
Msa0328550 MtrunA17_Chr8g0385991 39.264 163 88 3 6 166 14 167 1.04e-32 119
Msa0328550 MtrunA17_Chr8g0345731 47.244 127 60 4 6 126 24 149 1.25e-32 117
Msa0328550 MtrunA17_Chr4g0026141 41.667 156 65 5 6 135 5 160 2.58e-31 116
Msa0328550 MtrunA17_Chr3g0131911 44.800 125 61 2 6 126 14 134 1.09e-28 108
Msa0328550 MtrunA17_Chr8g0345741 47.788 113 55 3 17 126 2 113 1.43e-28 106
Msa0328550 MtrunA17_Chr2g0321631 45.669 127 60 5 7 126 5 129 1.01e-27 106
Msa0328550 MtrunA17_Chr8g0345721 38.462 156 63 4 3 126 32 186 2.66e-27 104
Msa0328550 MtrunA17_Chr4g0050701 43.902 123 57 3 6 126 11 123 8.85e-27 102
Msa0328550 MtrunA17_Chr7g0266701 36.810 163 72 6 6 138 4 165 9.15e-27 104
Msa0328550 MtrunA17_Chr8g0345701 39.568 139 64 5 5 126 6 141 8.46e-26 99.8
Msa0328550 MtrunA17_Chr3g0113001 62.500 64 24 0 63 126 20 83 4.29e-23 95.5
Msa0328550 MtrunA17_Chr7g0251651 34.058 138 85 4 4 138 16 150 5.40e-20 84.7
Msa0328550 MtrunA17_Chr7g0243371 49.315 73 35 1 56 126 12 84 6.90e-19 79.7
Msa0328550 MtrunA17_Chr3g0113031 62.500 56 21 0 71 126 3 58 2.36e-18 82.0
Msa0328550 MtrunA17_Chr7g0251661 30.882 136 90 3 2 135 6 139 1.45e-16 74.7
Msa0328550 MtrunA17_Chr8g0384351 28.436 211 102 9 2 195 6 184 2.59e-16 74.7
Msa0328550 MtrunA17_Chr1g0194791 63.043 46 16 1 8 52 48 93 3.13e-14 67.0
Msa0328550 MtrunA17_Chr7g0251671 30.328 122 81 3 6 126 10 128 2.08e-13 66.2
Msa0328550 MtrunA17_Chr3g0130321 29.771 131 80 4 6 132 7 129 6.47e-13 65.9
Msa0328550 MtrunA17_Chr3g0113011 55.102 49 22 0 4 52 17 65 1.47e-12 61.6
Msa0328550 MtrunA17_Chr3g0113041 58.140 43 18 0 10 52 23 65 2.60e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328550 AT1G54330.1 72.500 160 28 1 1 144 1 160 1.14e-80 244
Msa0328550 AT3G17730.1 71.154 156 26 1 1 137 1 156 1.19e-78 238
Msa0328550 AT1G65910.1 65.143 175 39 2 1 156 1 172 3.13e-77 245
Msa0328550 AT3G03200.1 67.296 159 32 1 1 139 1 159 1.01e-76 240
Msa0328550 AT5G17260.1 66.038 159 34 1 1 139 1 159 1.54e-75 237
Msa0328550 AT4G17980.1 62.319 138 48 2 1 134 1 138 6.54e-60 190
Msa0328550 AT4G17980.2 62.319 138 48 2 1 134 1 138 1.18e-59 191
Msa0328550 AT5G46590.2 61.481 135 49 2 1 132 1 135 1.23e-58 187
Msa0328550 AT5G46590.1 61.481 135 49 2 1 132 1 135 1.58e-58 188
Msa0328550 AT5G66300.1 53.704 162 56 3 5 147 11 172 1.16e-55 180
Msa0328550 AT3G10490.1 52.000 175 58 3 5 153 26 200 1.24e-55 179
Msa0328550 AT3G10500.1 55.828 163 52 2 5 148 8 169 1.45e-55 187
Msa0328550 AT5G04410.1 54.601 163 54 2 5 148 8 169 5.50e-55 186
Msa0328550 AT3G10480.2 51.515 165 61 1 1 146 22 186 6.91e-55 182
Msa0328550 AT3G10480.1 51.807 166 59 2 1 145 22 187 8.91e-55 182
Msa0328550 AT3G10490.2 43.103 232 100 6 5 205 26 256 1.01e-54 182
Msa0328550 AT2G18060.3 49.405 168 64 3 1 147 1 168 3.35e-53 176
Msa0328550 AT2G18060.1 49.405 168 64 3 1 147 1 168 3.35e-53 176
Msa0328550 AT1G33280.1 48.521 169 70 2 6 157 8 176 3.51e-53 174
Msa0328550 AT4G27410.2 50.318 157 57 2 1 138 9 163 5.39e-53 174
Msa0328550 AT1G32510.1 50.909 165 54 2 1 138 1 165 9.08e-53 172
Msa0328550 AT1G71930.2 52.288 153 55 2 5 139 8 160 1.05e-52 174
Msa0328550 AT1G71930.1 52.288 153 55 2 5 139 8 160 1.05e-52 174
Msa0328550 AT4G10350.1 52.632 152 52 2 6 137 9 160 1.97e-52 174
Msa0328550 AT4G35580.1 53.947 152 51 1 5 137 8 159 9.18e-52 176
Msa0328550 AT4G35580.3 53.947 152 51 1 5 137 8 159 9.65e-52 176
Msa0328550 AT4G35580.2 53.947 152 51 1 5 137 8 159 9.91e-52 176
Msa0328550 AT1G33060.1 53.947 152 51 1 5 137 23 174 1.01e-51 178
Msa0328550 AT1G33060.2 53.947 152 51 1 5 137 23 174 1.07e-51 178
Msa0328550 AT3G15500.1 50.641 156 56 2 1 137 9 162 1.23e-51 171
Msa0328550 AT4G36160.2 50.993 151 56 2 5 137 13 163 1.38e-51 172
Msa0328550 AT4G36160.1 50.993 151 56 2 5 137 9 159 1.44e-51 172
Msa0328550 AT4G36160.3 50.993 151 56 2 5 137 9 159 1.44e-51 172
Msa0328550 AT1G12260.2 48.684 152 60 2 6 139 7 158 3.34e-51 170
Msa0328550 AT1G12260.1 48.684 152 60 2 6 139 7 158 5.94e-51 171
Msa0328550 AT1G62700.1 50.000 152 58 2 6 139 7 158 7.66e-51 171
Msa0328550 AT1G62700.2 50.000 152 58 2 6 139 7 158 7.66e-51 171
Msa0328550 AT1G52890.1 50.000 156 57 2 1 137 9 162 1.42e-50 168
Msa0328550 AT3G04070.2 43.784 185 63 5 5 150 9 191 4.42e-50 167
Msa0328550 AT1G69490.1 50.641 156 52 2 5 137 8 161 5.44e-50 165
Msa0328550 AT3G29035.1 61.789 123 45 1 4 126 22 142 1.32e-49 166
Msa0328550 AT5G62380.2 47.799 159 65 2 6 146 7 165 1.82e-49 166
Msa0328550 AT5G62380.1 47.799 159 65 2 6 146 7 165 1.82e-49 166
Msa0328550 AT3G10480.3 43.216 199 60 2 1 146 22 220 2.55e-49 170
Msa0328550 AT4G27410.3 45.930 172 59 3 1 138 9 180 3.46e-49 164
Msa0328550 AT3G18400.1 50.993 151 54 2 6 138 5 153 4.19e-49 164
Msa0328550 AT5G08790.1 55.172 145 59 4 4 146 5 145 5.44e-49 163
Msa0328550 AT5G39610.1 50.968 155 53 2 4 137 18 170 8.92e-49 162
Msa0328550 AT2G24430.2 52.597 154 51 3 5 138 15 166 8.95e-49 163
Msa0328550 AT2G24430.1 52.597 154 51 3 5 138 15 166 8.95e-49 163
Msa0328550 AT5G07680.2 50.641 156 54 2 4 138 1 154 1.04e-48 163
Msa0328550 AT5G61430.1 37.795 254 105 8 4 226 14 245 1.20e-48 164
Msa0328550 AT5G07680.1 50.641 156 54 2 4 138 15 168 1.31e-48 163
Msa0328550 AT5G53950.1 53.416 161 50 3 6 143 17 175 1.34e-48 164
Msa0328550 AT1G79580.3 49.342 152 59 3 4 137 15 166 1.62e-48 164
Msa0328550 AT1G79580.5 49.342 152 59 3 4 137 15 166 1.62e-48 164
Msa0328550 AT1G79580.4 49.342 152 59 3 4 137 15 166 1.62e-48 164
Msa0328550 AT1G79580.2 49.342 152 59 3 4 137 15 166 1.62e-48 164
Msa0328550 AT1G79580.1 49.342 152 59 3 4 137 15 166 1.62e-48 164
Msa0328550 AT1G76420.1 53.595 153 49 3 6 138 22 172 2.39e-48 163
Msa0328550 AT3G04070.1 55.118 127 50 3 5 126 9 133 2.50e-48 163
Msa0328550 AT1G01720.1 50.955 157 51 3 4 137 5 158 9.98e-48 160
Msa0328550 AT1G34190.1 48.125 160 63 2 8 148 18 176 1.11e-47 166
Msa0328550 AT3G49530.2 40.517 232 101 6 5 207 12 235 2.85e-47 162
Msa0328550 AT2G46770.1 38.326 227 82 5 6 197 16 219 3.51e-47 160
Msa0328550 AT3G49530.1 40.517 232 101 6 5 207 12 235 4.09e-47 163
Msa0328550 AT5G64060.1 47.436 156 63 1 1 137 1 156 4.81e-47 160
Msa0328550 AT1G34180.3 47.500 160 64 2 8 148 18 176 5.69e-47 162
Msa0328550 AT1G32770.1 55.738 122 53 1 6 126 16 137 5.78e-47 160
Msa0328550 AT5G63790.1 49.375 160 54 3 2 137 46 202 6.67e-47 158
Msa0328550 AT3G15170.1 47.312 186 82 4 6 177 20 203 7.45e-47 158
Msa0328550 AT5G63790.2 49.375 160 54 3 2 137 56 212 8.02e-47 159
Msa0328550 AT5G24590.2 49.682 157 59 2 1 137 8 164 8.23e-47 162
Msa0328550 AT3G61910.1 54.918 122 54 1 6 126 11 132 1.49e-46 158
Msa0328550 AT1G77450.1 47.647 170 64 3 2 149 6 172 2.06e-46 155
Msa0328550 AT5G09330.5 34.000 300 149 4 1 251 1 300 2.23e-46 161
Msa0328550 AT5G09330.2 34.000 300 149 4 1 251 1 300 2.23e-46 161
Msa0328550 AT5G09330.4 34.000 300 149 4 1 251 1 300 2.23e-46 161
Msa0328550 AT5G09330.3 34.000 300 149 4 1 251 1 300 2.23e-46 161
Msa0328550 AT5G09330.1 34.000 300 149 4 1 251 1 300 2.23e-46 161
Msa0328550 AT1G34180.1 47.500 160 64 2 8 148 18 176 2.25e-46 162
Msa0328550 AT1G26870.1 47.239 163 54 3 6 138 16 176 2.52e-46 159
Msa0328550 AT3G12977.1 47.771 157 60 2 1 137 13 167 5.05e-46 155
Msa0328550 AT5G39820.1 41.899 179 60 3 8 144 22 198 8.75e-46 156
Msa0328550 AT2G27300.1 55.303 132 58 1 1 132 9 139 1.50e-45 155
Msa0328550 AT1G61110.1 47.399 173 52 5 6 143 16 184 3.27e-45 154
Msa0328550 AT5G18270.1 50.000 154 53 3 6 137 21 172 3.71e-45 154
Msa0328550 AT2G33480.2 50.993 151 52 3 4 137 13 158 5.29e-45 152
Msa0328550 AT2G33480.1 50.327 153 52 3 4 137 13 160 1.07e-44 151
Msa0328550 AT5G18270.2 49.351 154 54 3 6 137 21 172 1.42e-44 153
Msa0328550 AT2G02450.1 47.973 148 57 3 8 137 53 198 2.32e-44 154
Msa0328550 AT2G02450.2 47.973 148 57 3 8 137 53 198 2.36e-44 154
Msa0328550 AT1G56010.2 47.239 163 61 3 1 140 14 174 5.37e-44 151
Msa0328550 AT3G44290.2 51.880 133 63 1 2 134 10 141 6.64e-44 148
Msa0328550 AT1G34180.4 44.186 172 64 3 8 148 18 188 8.99e-44 154
Msa0328550 AT3G15510.1 42.623 183 64 4 10 160 21 194 1.45e-43 151
Msa0328550 AT1G34180.2 44.186 172 64 3 8 148 18 188 3.17e-43 154
Msa0328550 AT3G44290.1 51.880 133 63 1 2 134 10 141 6.69e-43 149
Msa0328550 AT5G22290.1 49.242 132 66 1 1 132 16 146 9.77e-43 148
Msa0328550 AT5G13180.1 50.000 154 52 4 4 137 12 160 1.44e-42 145
Msa0328550 AT2G43000.1 47.134 157 58 3 2 138 17 168 3.97e-42 145
Msa0328550 AT4G28530.1 47.273 165 52 4 6 137 10 172 4.31e-42 147
Msa0328550 AT3G04060.1 48.701 154 55 3 6 137 20 171 1.44e-41 145
Msa0328550 AT1G32870.2 48.171 164 61 3 6 148 10 170 9.84e-41 147
Msa0328550 AT1G32870.1 48.171 164 61 3 6 148 10 170 1.12e-40 147
Msa0328550 AT1G32870.3 48.171 164 61 3 6 148 46 206 1.79e-40 147
Msa0328550 AT2G17040.1 43.709 151 66 4 8 141 8 156 8.16e-39 136
Msa0328550 AT5G04395.1 43.919 148 67 3 2 133 24 171 5.14e-38 132
Msa0328550 AT1G52880.1 46.250 160 53 3 10 138 21 178 1.71e-37 134
Msa0328550 AT3G12910.1 41.667 168 59 5 8 139 23 187 2.51e-34 125
Msa0328550 AT4G01520.1 42.188 128 69 3 4 126 2 129 5.02e-30 114
Msa0328550 AT4G28530.2 53.211 109 33 2 6 98 10 116 5.55e-30 114
Msa0328550 AT4G10350.2 50.000 94 28 1 63 137 20 113 1.13e-27 107
Msa0328550 AT4G01540.3 41.463 123 67 3 9 126 7 129 1.30e-27 110
Msa0328550 AT4G01540.4 41.463 123 67 3 9 126 7 129 1.46e-27 109
Msa0328550 AT4G01540.2 41.463 123 67 3 9 126 7 129 1.48e-27 109
Msa0328550 AT4G01540.1 41.463 123 67 3 9 126 7 129 1.76e-27 110
Msa0328550 AT4G01550.1 43.443 122 65 2 9 126 7 128 8.95e-27 108
Msa0328550 AT5G61430.2 35.602 191 98 6 63 235 8 191 2.73e-26 103
Msa0328550 AT5G64530.2 41.600 125 57 4 4 126 1 111 1.66e-25 98.6
Msa0328550 AT5G22380.1 33.498 203 100 7 9 176 8 210 3.36e-25 100
Msa0328550 AT5G64530.1 41.600 125 57 4 4 126 1 111 4.06e-25 98.6
Msa0328550 AT3G12977.2 49.474 95 28 1 63 137 20 114 6.07e-25 99.0
Msa0328550 AT1G56010.1 48.000 100 30 1 63 140 8 107 9.49e-25 99.4
Msa0328550 AT3G04420.2 32.461 191 105 6 4 170 1 191 1.28e-24 99.8
Msa0328550 AT3G04420.1 32.461 191 105 6 4 170 1 191 2.73e-24 99.8
Msa0328550 AT1G02230.1 40.625 128 68 5 4 126 1 125 6.30e-24 99.0
Msa0328550 AT2G33480.3 50.000 94 28 2 63 137 10 103 8.70e-23 93.2
Msa0328550 AT3G44350.2 35.032 157 78 5 6 138 5 161 5.06e-22 91.7
Msa0328550 AT1G02220.1 35.172 145 81 4 4 135 1 145 5.54e-22 94.0
Msa0328550 AT3G44350.1 40.000 125 71 4 6 126 5 129 5.61e-22 89.7
Msa0328550 AT1G02250.1 32.099 162 102 4 4 160 1 159 1.91e-21 92.4
Msa0328550 AT1G01010.1 37.984 129 66 4 9 126 6 131 2.03e-19 87.0
Msa0328550 AT3G10490.4 33.974 156 71 6 81 205 2 156 1.45e-16 78.6
Msa0328550 AT3G10490.3 33.974 156 71 6 81 205 2 156 1.45e-16 78.6
Msa0328550 AT3G55210.1 31.447 159 80 5 5 135 10 167 1.72e-16 77.4
Msa0328550 AT3G56530.1 32.000 125 82 2 4 126 50 173 7.43e-16 76.3
Msa0328550 AT5G14000.2 30.534 131 85 2 4 132 13 139 2.48e-15 71.6
Msa0328550 AT5G14000.1 30.534 131 85 2 4 132 13 139 1.25e-14 70.9
Msa0328550 AT3G04430.1 38.889 108 62 4 12 117 6 111 1.68e-14 70.5
Msa0328550 AT5G50820.1 31.818 132 76 4 4 131 15 136 6.27e-14 68.9
Msa0328550 AT2G43000.2 31.973 147 75 3 70 195 2 144 1.07e-13 68.2
Msa0328550 AT2G18060.2 40.506 79 30 1 86 147 2 80 5.26e-13 67.4

Find 81 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCATCACATGGAAATTT+TGG 0.149659 2_4:+41153309 None:intergenic
CTACCCTTCAAATTTATTTC+AGG 0.177248 2_4:-41153154 Msa0328550:intron
TATAAATTGCAGGGGCGTTT+GGG 0.236822 2_4:-41150237 Msa0328550:intron
AAAATAGAAAGCTTCTTCTT+TGG 0.243238 2_4:+41149090 None:intergenic
TGACTCTTCCACCTGGATTC+AGG 0.261369 2_4:-41155218 Msa0328550:CDS
CTATTTGTTCTTGACCCATT+TGG 0.270391 2_4:+41154880 None:intergenic
TCTTGATTAGTGACACTTTA+GGG 0.283313 2_4:-41150142 Msa0328550:three_prime_UTR
GAGCAACAAGAGGTGGTTAT+TGG 0.284107 2_4:-41154858 Msa0328550:CDS
GATTACACAAACTTTGTATA+AGG 0.291143 2_4:-41149348 Msa0328550:intron
ATTTCTTCCTAGCAAGGATA+TGG 0.291890 2_4:-41154938 Msa0328550:CDS
TTTGGATACTTTCTATCTCT+TGG 0.302528 2_4:+41154898 None:intergenic
AATGTATAACTGACTTATTT+AGG 0.328652 2_4:+41150113 None:intergenic
ATATAAATTGCAGGGGCGTT+TGG 0.343851 2_4:-41150238 Msa0328550:intron
AAGAGAAGTAATGCAAACTA+TGG 0.358125 2_4:-41153361 Msa0328550:CDS
TCATGGGATGTTATTATTGA+TGG 0.358848 2_4:-41149139 Msa0328550:three_prime_UTR
CTCTTGATTAGTGACACTTT+AGG 0.363887 2_4:-41150143 Msa0328550:three_prime_UTR
TTTATTACATACTCTGAATC+CGG 0.373755 2_4:+41150719 None:intergenic
GGAAAGCAACTGGAAAAGAT+AGG 0.389822 2_4:-41154837 Msa0328550:CDS
CAGATGAAGCATAGGCAATC+AGG 0.405231 2_4:+41149370 None:intergenic
TAATGAAGAGGAACAAGTTA+AGG 0.412340 2_4:-41153457 Msa0328550:CDS
AGAGATAGAAAGTATCCAAA+TGG 0.427350 2_4:-41154895 Msa0328550:CDS
GCTTCTTCTTTGGATTGTTG+TGG 0.431550 2_4:+41149100 None:intergenic
AATCCAGGTGGAAGAGTCAT+TGG 0.438753 2_4:+41155222 None:intergenic
GTTACCTGAAATAAATTTGA+AGG 0.439712 2_4:+41153150 None:intergenic
GAAAATTCGACACAATGAAT+AGG 0.442423 2_4:+41153509 None:intergenic
GGTGGTTATTGGAAAGCAAC+TGG 0.443966 2_4:-41154847 Msa0328550:CDS
TCTCTATAAATGTGAACCTT+GGG 0.451056 2_4:-41155103 Msa0328550:CDS
ATATTCATGCATAACCCAAT+TGG 0.452860 2_4:+41154732 None:intergenic
CTCATGGGATTAGAACCAAT+TGG 0.456147 2_4:-41154747 Msa0328550:CDS
ATCTCTATAAATGTGAACCT+TGG 0.459278 2_4:-41155104 Msa0328550:CDS
TTCAGCTATTTCTTATCCAA+TGG 0.459398 2_4:-41153184 Msa0328550:CDS
CATGGGATGTTATTATTGAT+GGG 0.462822 2_4:-41149138 Msa0328550:three_prime_UTR
CTAACTATTGAAACGAATCA+TGG 0.463285 2_4:-41149156 Msa0328550:three_prime_UTR
TCAGCTATTTCTTATCCAAT+GGG 0.470769 2_4:-41153183 Msa0328550:CDS
GTTATACATTTGTTCAAGTA+GGG 0.471243 2_4:-41150100 Msa0328550:three_prime_UTR
AGTTATACATTTGTTCAAGT+AGG 0.482632 2_4:-41150101 Msa0328550:three_prime_UTR
TTTCTGCTAAAAGCCTCCTA+TGG 0.483573 2_4:+41150201 None:intergenic
TCATGGGATTAGAACCAATT+GGG 0.493990 2_4:-41154746 Msa0328550:intron
AACTCTCAAAAGAAACAAGT+TGG 0.494236 2_4:-41154808 Msa0328550:CDS
GAGATAGAAAGTATCCAAAT+GGG 0.506144 2_4:-41154894 Msa0328550:CDS
GAAGGGTAGCTTATTCCCAT+TGG 0.508821 2_4:+41153168 None:intergenic
ATGTGATGCTTCTTCATCTG+AGG 0.512565 2_4:-41153298 Msa0328550:CDS
GCAACAAGTTCTTCATCTGT+AGG 0.512741 2_4:+41155189 None:intergenic
ATATTATTACATGTATCTGT+TGG 0.528216 2_4:+41153255 None:intergenic
CAACAAGTTCTTCATCTGTA+GGG 0.531691 2_4:+41155190 None:intergenic
GGATACAAAGAAGGAAATGA+TGG 0.533065 2_4:-41153436 Msa0328550:CDS
GGGGTTGAATCATTCACCAT+AGG 0.535597 2_4:-41150217 Msa0328550:three_prime_UTR
AAGATCATTTCTTCCTAGCA+AGG 0.548567 2_4:-41154944 Msa0328550:CDS
TAACTATTGAAACGAATCAT+GGG 0.553308 2_4:-41149155 Msa0328550:three_prime_UTR
TTATTACATACTCTGAATCC+GGG 0.555352 2_4:+41150720 None:intergenic
ACAAGTTAAGGATACAAAGA+AGG 0.556054 2_4:-41153445 Msa0328550:CDS
GAAAGCAACTGGAAAAGATA+GGG 0.558131 2_4:-41154836 Msa0328550:CDS
AAGACACTTGTTTATTACAA+AGG 0.562015 2_4:-41154778 Msa0328550:CDS
GTTGAATCATTCACCATAGG+AGG 0.571009 2_4:-41150214 Msa0328550:three_prime_UTR
GTAGGGTGGAACCTGAATCC+AGG 0.574340 2_4:+41155207 None:intergenic
TTACCTGAAATAAATTTGAA+GGG 0.575453 2_4:+41153151 None:intergenic
TCTTCATCTGAGGTCACTCA+AGG 0.581348 2_4:-41153288 Msa0328550:CDS
ATAAATTGCAGGGGCGTTTG+GGG 0.583553 2_4:-41150236 Msa0328550:intron
TGTGAACCTTGGGATTTACC+AGG 0.585259 2_4:-41155093 Msa0328550:intron
TACCACTCCATATCCTTGCT+AGG 0.589851 2_4:+41154931 None:intergenic
TACAAAGGTAGAGCACCTCA+TGG 0.591677 2_4:-41154763 Msa0328550:CDS
TGTGTAATCAGATGAAGCAT+AGG 0.592134 2_4:+41149362 None:intergenic
AATGTACCTGGTAAATCCCA+AGG 0.593393 2_4:+41155087 None:intergenic
GCTCCAATGACTCTTCCACC+TGG 0.596077 2_4:-41155225 Msa0328550:CDS
GTCTTAGAAGAACAAGTGCA+AGG 0.598803 2_4:-41153414 Msa0328550:CDS
TCTTAGAAGAACAAGTGCAA+GGG 0.610254 2_4:-41153413 Msa0328550:CDS
ACAAATAGAGCAACAAGAGG+TGG 0.614366 2_4:-41154865 Msa0328550:CDS
TATTTGAGATAAAGACCTTG+AGG 0.625195 2_4:-41149853 Msa0328550:intron
ACAAAGGTAGAGCACCTCAT+GGG 0.636035 2_4:-41154762 Msa0328550:CDS
TTCCTAGCAAGGATATGGAG+TGG 0.642089 2_4:-41154933 Msa0328550:CDS
CTTAGAAGAACAAGTGCAAG+GGG 0.650573 2_4:-41153412 Msa0328550:CDS
CAAGTTCTTCATCTGTAGGG+TGG 0.653084 2_4:+41155193 None:intergenic
TGTGCATGAAAATCCTCTGT+GGG 0.661578 2_4:+41153231 None:intergenic
CAAGGGGAAGACTCAAGTGG+TGG 0.675596 2_4:-41153396 Msa0328550:CDS
AGAACAAATAGAGCAACAAG+AGG 0.677656 2_4:-41154868 Msa0328550:CDS
GTGCAAGGGGAAGACTCAAG+TGG 0.679628 2_4:-41153399 Msa0328550:CDS
TCAGATGAAGAAGCATCACA+TGG 0.689871 2_4:+41153300 None:intergenic
TTGTGCATGAAAATCCTCTG+TGG 0.696517 2_4:+41153230 None:intergenic
GGGTGGAACCTGAATCCAGG+TGG 0.704732 2_4:+41155210 None:intergenic
CAATTGGTTCTAATCCCATG+AGG 0.731060 2_4:+41154748 None:intergenic
ATGTAATAATATACCCACAG+AGG 0.747259 2_4:-41153244 Msa0328550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATTTTTTTATATT+TGG - chr2_4:41154773-41154792 Msa0328550:CDS 0.0%
!!! AGATAGATTTTTTTTTTTTT+TGG + chr2_4:41149129-41149148 None:intergenic 10.0%
!! TATAAAGAAAAAGAAAATAA+AGG + chr2_4:41149580-41149599 None:intergenic 10.0%
!!! AATTGTATATATGATTTTTA+AGG + chr2_4:41150368-41150387 None:intergenic 10.0%
!! AATTTGATTAATACATAATA+GGG + chr2_4:41150651-41150670 None:intergenic 10.0%
!! AAATTTGATTAATACATAAT+AGG + chr2_4:41150652-41150671 None:intergenic 10.0%
!! ATTATGTATTAATCAAATTT+AGG - chr2_4:41150652-41150671 Msa0328550:intron 10.0%
!! TTATGTATTAATCAAATTTA+GGG - chr2_4:41150653-41150672 Msa0328550:intron 10.0%
!!! TAATTTTACATGTAAATTTT+TGG - chr2_4:41150845-41150864 Msa0328550:intron 10.0%
!!! AAGATTTTTAAAATTGAATA+TGG + chr2_4:41152721-41152740 None:intergenic 10.0%
!!! ATTTTTTTTTTAGTTACATA+TGG - chr2_4:41154967-41154986 Msa0328550:intron 10.0%
!!! TAACAATTTTATAAAATACA+TGG + chr2_4:41155206-41155225 None:intergenic 10.0%
!!! AAATTGAATTTTTTCATAGA+TGG - chr2_4:41149341-41149360 Msa0328550:intron 15.0%
!!! TTTATTTTTGTATCCTTTTA+GGG + chr2_4:41149369-41149388 None:intergenic 15.0%
!!! ATTTATTTTTGTATCCTTTT+AGG + chr2_4:41149370-41149389 None:intergenic 15.0%
!! AAAATTAAACACTATGATAT+TGG + chr2_4:41149775-41149794 None:intergenic 15.0%
!! TAATGTTATGAAAAAATTTC+AGG - chr2_4:41149872-41149891 Msa0328550:three_prime_UTR 15.0%
!!! TGTTACTTAATAAGATTATT+TGG - chr2_4:41150291-41150310 Msa0328550:intron 15.0%
!!! TTTAAGGTTGTTTTAATTAA+AGG + chr2_4:41150352-41150371 None:intergenic 15.0%
!!! AAATTTTTGGATTTTATCAA+TGG - chr2_4:41150858-41150877 Msa0328550:intron 15.0%
!! ATAAATAACAATCAATGATT+CGG + chr2_4:41152060-41152079 None:intergenic 15.0%
!! TTGCAATTGAAAATAAAAAT+TGG + chr2_4:41152413-41152432 None:intergenic 15.0%
!! TTAAAATTGAATATGGATAT+TGG + chr2_4:41152714-41152733 None:intergenic 15.0%
!! ATTACATAAATAGATGAATA+AGG - chr2_4:41153025-41153044 Msa0328550:intron 15.0%
!!! TAAGATTTTTAATCTATTTG+TGG + chr2_4:41153742-41153761 None:intergenic 15.0%
!! TACTTAGAAAGAAAAATAAC+AGG - chr2_4:41148245-41148264 Msa0328550:three_prime_UTR 20.0%
!!! ATTATTTTAAGAAATGTACC+TGG + chr2_4:41148335-41148354 None:intergenic 20.0%
!! CTGCAAATAAATTCAAATAA+TGG + chr2_4:41148442-41148461 None:intergenic 20.0%
!!! TTAATCTTCTCTTTTTAAGA+AGG - chr2_4:41148879-41148898 Msa0328550:intron 20.0%
!! AGAAATAACTAAATAGAACT+AGG - chr2_4:41148953-41148972 Msa0328550:intron 20.0%
!! GAAATAACTAAATAGAACTA+GGG - chr2_4:41148954-41148973 Msa0328550:intron 20.0%
!! CATTATTTGTGTCATAATAA+AGG - chr2_4:41149006-41149025 Msa0328550:intron 20.0%
!!! GTTTTGATGAAAATAGAATT+TGG - chr2_4:41149260-41149279 Msa0328550:intron 20.0%
!!! TAACATTACTTAGCTTTTAA+AGG + chr2_4:41149860-41149879 None:intergenic 20.0%
!! ATATTATTACATGTATCTGT+TGG + chr2_4:41150155-41150174 None:intergenic 20.0%
!! TTACCTGAAATAAATTTGAA+GGG + chr2_4:41150259-41150278 None:intergenic 20.0%
!! ATGAATCTATTAGATTAGTA+GGG - chr2_4:41150484-41150503 Msa0328550:intron 20.0%
!! TTTATTGTATGTAACATTTG+TGG + chr2_4:41150692-41150711 None:intergenic 20.0%
!! AAATATACTCCAAAAAATAG+AGG + chr2_4:41150807-41150826 None:intergenic 20.0%
!!! TTTGAAATTTGAATTGAAGA+GGG + chr2_4:41151626-41151645 None:intergenic 20.0%
!!! TTTTGAAATTTGAATTGAAG+AGG + chr2_4:41151627-41151646 None:intergenic 20.0%
!! GAAAGTAAAAAATAGAATGA+GGG + chr2_4:41151717-41151736 None:intergenic 20.0%
!! AGAAAGTAAAAAATAGAATG+AGG + chr2_4:41151718-41151737 None:intergenic 20.0%
!!! TCCTAATCTTTTATTTTCAA+AGG - chr2_4:41151994-41152013 Msa0328550:intron 20.0%
!!! ACCTTTGAAAATAAAAGATT+AGG + chr2_4:41151998-41152017 None:intergenic 20.0%
!!! ATTTTGATTTTGATTTTGTG+TGG - chr2_4:41152078-41152097 Msa0328550:intron 20.0%
!!! ATTTTTTTGATAGAACACTA+TGG - chr2_4:41152288-41152307 Msa0328550:intron 20.0%
!! TCAAAATCAAGCTAAAAAAA+GGG + chr2_4:41152584-41152603 None:intergenic 20.0%
!!! TTTTGTTAATTTGTAACTAG+AGG - chr2_4:41152747-41152766 Msa0328550:intron 20.0%
!!! TATGTTGTTTGTTAATTTGA+AGG - chr2_4:41152786-41152805 Msa0328550:intron 20.0%
!!! ATGTTGTTTGTTAATTTGAA+GGG - chr2_4:41152787-41152806 Msa0328550:intron 20.0%
!!! CAGAAAACAAATTTTTACTT+GGG + chr2_4:41153080-41153099 None:intergenic 20.0%
!! AAAGATGAATATAAATTGCA+GGG - chr2_4:41153161-41153180 Msa0328550:CDS 20.0%
!!! AATGTATAACTGACTTATTT+AGG + chr2_4:41153297-41153316 None:intergenic 20.0%
!! ATTTGAAGAAAAATATCCAA+AGG - chr2_4:41153340-41153359 Msa0328550:CDS 20.0%
!! AGTATATGCAAAGATTAAAA+AGG + chr2_4:41153449-41153468 None:intergenic 20.0%
!!! TTATATGAAATTGCTTTTTG+TGG - chr2_4:41153468-41153487 Msa0328550:CDS 20.0%
!!! ATTCTTCTTTTTCTTTGTTT+TGG - chr2_4:41153495-41153514 Msa0328550:CDS 20.0%
!!! TTAATCTTTTATTCACTTTG+AGG - chr2_4:41154412-41154431 Msa0328550:intron 20.0%
!! AAATAATATTGACCTTAGAA+AGG + chr2_4:41154480-41154499 None:intergenic 20.0%
!!! TTTTTTTATAGAAGTCTACT+TGG - chr2_4:41154663-41154682 Msa0328550:intron 20.0%
!!! TTTTTTTGACAAGAAAAACA+CGG - chr2_4:41154735-41154754 Msa0328550:intron 20.0%
!!! ATATTTTTTGCCAAGTTTTT+GGG - chr2_4:41155027-41155046 Msa0328550:intron 20.0%
! AAGACACTTGTTTATTACAA+AGG - chr2_4:41148629-41148648 Msa0328550:intron 25.0%
!!! ATGTTAGCTTGGTAATTTTT+AGG - chr2_4:41148905-41148924 Msa0328550:intron 25.0%
! TATTTGTGTCATAATAAAGG+AGG - chr2_4:41149009-41149028 Msa0328550:intron 25.0%
! ATTTGTGTCATAATAAAGGA+GGG - chr2_4:41149010-41149029 Msa0328550:intron 25.0%
! ACATTAACTCCTAATTAGAA+GGG + chr2_4:41149188-41149207 None:intergenic 25.0%
! AACATTAACTCCTAATTAGA+AGG + chr2_4:41149189-41149208 None:intergenic 25.0%
!! GACTAGTGATATACAAATTT+TGG + chr2_4:41149430-41149449 None:intergenic 25.0%
! ATGTATAACAAGATTGGAAA+AGG + chr2_4:41149715-41149734 None:intergenic 25.0%
! AAGCAAATGTATAACAAGAT+TGG + chr2_4:41149721-41149740 None:intergenic 25.0%
! TCCAACAAAAAATAATGAAG+AGG - chr2_4:41149938-41149957 Msa0328550:intron 25.0%
!!! TCCTCTTCATTATTTTTTGT+TGG + chr2_4:41149942-41149961 None:intergenic 25.0%
!! TGAACTATTTTCTTCTTCAT+AGG + chr2_4:41150207-41150226 None:intergenic 25.0%
! GTTACCTGAAATAAATTTGA+AGG + chr2_4:41150260-41150279 None:intergenic 25.0%
! TACAATTGATTGTGATTGTT+TGG - chr2_4:41150381-41150400 Msa0328550:intron 25.0%
! CATGAATCTATTAGATTAGT+AGG - chr2_4:41150483-41150502 Msa0328550:intron 25.0%
! TGAATCTATTAGATTAGTAG+GGG - chr2_4:41150485-41150504 Msa0328550:intron 25.0%
! ACATATGAAAAAGCAAAAGT+GGG - chr2_4:41150508-41150527 Msa0328550:intron 25.0%
! CATTATTATATTGATCTGCT+TGG - chr2_4:41150544-41150563 Msa0328550:intron 25.0%
!!! AGAAAGTTACCTCTATTTTT+TGG - chr2_4:41150795-41150814 Msa0328550:intron 25.0%
! AACTCAAAAATAAGCTATGT+GGG + chr2_4:41150884-41150903 None:intergenic 25.0%
! AAACTCAAAAATAAGCTATG+TGG + chr2_4:41150885-41150904 None:intergenic 25.0%
! ATCTTAAAGTGATGAAAGTT+GGG - chr2_4:41150913-41150932 Msa0328550:intron 25.0%
!! TGAGCTTTATAAAAAGATTG+AGG + chr2_4:41150952-41150971 None:intergenic 25.0%
! TCAAAAGAAATTATAGGGAA+TGG + chr2_4:41151019-41151038 None:intergenic 25.0%
! GTCAGTCAAAAGAAATTATA+GGG + chr2_4:41151024-41151043 None:intergenic 25.0%
! AGTCAGTCAAAAGAAATTAT+AGG + chr2_4:41151025-41151044 None:intergenic 25.0%
!! ACTATAGCTTTTGCTAAAAT+TGG + chr2_4:41151208-41151227 None:intergenic 25.0%
! AGCAATATATGCATTTGATT+GGG - chr2_4:41151278-41151297 Msa0328550:intron 25.0%
! AAGTGATGTACTTGATTTAT+GGG + chr2_4:41151334-41151353 None:intergenic 25.0%
! AAAGTGATGTACTTGATTTA+TGG + chr2_4:41151335-41151354 None:intergenic 25.0%
!! TAATGATGATGTTGCATTAA+GGG + chr2_4:41151530-41151549 None:intergenic 25.0%
!! TTAATGATGATGTTGCATTA+AGG + chr2_4:41151531-41151550 None:intergenic 25.0%
! TATTGTGTGAAAGCTTAAAA+TGG + chr2_4:41151572-41151591 None:intergenic 25.0%
! AAAAAGTAGGAAGGAAAAAA+GGG + chr2_4:41151666-41151685 None:intergenic 25.0%
!!! TTTTCATCTTTTTTTGTCGA+TGG + chr2_4:41151933-41151952 None:intergenic 25.0%
! GTAAATCCGAAAATGAAAAT+GGG + chr2_4:41152240-41152259 None:intergenic 25.0%
! TGTAAATCCGAAAATGAAAA+TGG + chr2_4:41152241-41152260 None:intergenic 25.0%
!! TTGTGTTTTGTAGACTATAA+TGG - chr2_4:41152452-41152471 Msa0328550:intron 25.0%
!! TGTGTTTTGTAGACTATAAT+GGG - chr2_4:41152453-41152472 Msa0328550:intron 25.0%
! GATATCTTAGTTTCAAGAAT+AGG - chr2_4:41152505-41152524 Msa0328550:intron 25.0%
! CTCAAAATCAAGCTAAAAAA+AGG + chr2_4:41152585-41152604 None:intergenic 25.0%
!!! TTTGTTGCTTTTTTATTTGC+AGG - chr2_4:41152639-41152658 Msa0328550:intron 25.0%
! TTTATTACATACTCTGAATC+CGG + chr2_4:41152691-41152710 None:intergenic 25.0%
! AATTTGAAGGGAAAAAAAAC+TGG - chr2_4:41152799-41152818 Msa0328550:intron 25.0%
! ATTTGAAGGGAAAAAAAACT+GGG - chr2_4:41152800-41152819 Msa0328550:intron 25.0%
!! GCAGAAAACAAATTTTTACT+TGG + chr2_4:41153081-41153100 None:intergenic 25.0%
! GAAAGATGAATATAAATTGC+AGG - chr2_4:41153160-41153179 Msa0328550:CDS 25.0%
! AAGATGAATATAAATTGCAG+GGG - chr2_4:41153162-41153181 Msa0328550:CDS 25.0%
! AGTTATACATTTGTTCAAGT+AGG - chr2_4:41153306-41153325 Msa0328550:CDS 25.0%
! GTTATACATTTGTTCAAGTA+GGG - chr2_4:41153307-41153326 Msa0328550:CDS 25.0%
! AATATCCAAAGGTAATAAGT+TGG - chr2_4:41153351-41153370 Msa0328550:CDS 25.0%
!! TCAAGAGTTAAATCTAAGAT+AGG + chr2_4:41153591-41153610 None:intergenic 25.0%
! ACTATAAGTACTAAGTTTGA+TGG + chr2_4:41153672-41153691 None:intergenic 25.0%
! TGTACTTATGAATGATGATT+TGG + chr2_4:41153791-41153810 None:intergenic 25.0%
! TATAGAGAATCGCAATATAA+AGG + chr2_4:41153946-41153965 None:intergenic 25.0%
! GATTACACAAACTTTGTATA+AGG - chr2_4:41154059-41154078 Msa0328550:intron 25.0%
! TAACTATTGAAACGAATCAT+GGG - chr2_4:41154252-41154271 Msa0328550:intron 25.0%
! AAAATAGAAAGCTTCTTCTT+TGG + chr2_4:41154320-41154339 None:intergenic 25.0%
!! TTTTTCTCATAAAATGATCG+TGG - chr2_4:41154353-41154372 Msa0328550:intron 25.0%
!!! ACTTAGAATTTTGAAGCATA+TGG - chr2_4:41154508-41154527 Msa0328550:intron 25.0%
!! CTACTTGAGATTATTTTCAT+AGG - chr2_4:41154616-41154635 Msa0328550:intron 25.0%
!! ATTTTCATAGGTCAATTCAT+TGG - chr2_4:41154628-41154647 Msa0328550:intron 25.0%
!!! ACTTGGATCATTTTTTTTAG+AGG - chr2_4:41154680-41154699 Msa0328550:intron 25.0%
!! TTTTCTATTGCTCAAAAACA+CGG - chr2_4:41154707-41154726 Msa0328550:intron 25.0%
!!! TTTTTTGACAAGAAAAACAC+GGG - chr2_4:41154736-41154755 Msa0328550:intron 25.0%
! TAGTTGTTTACTCATTCTTT+AGG - chr2_4:41154802-41154821 Msa0328550:CDS 25.0%
!!! GATATTTTTTGCCAAGTTTT+TGG - chr2_4:41155026-41155045 Msa0328550:intron 25.0%
!! CTTATTTGCATACAATTTTG+AGG - chr2_4:41155101-41155120 Msa0328550:CDS 25.0%
ATCTCTATAAATGTGAACCT+TGG - chr2_4:41148303-41148322 Msa0328550:three_prime_UTR 30.0%
TCTCTATAAATGTGAACCTT+GGG - chr2_4:41148304-41148323 Msa0328550:three_prime_UTR 30.0%
TTTGGATACTTTCTATCTCT+TGG + chr2_4:41148512-41148531 None:intergenic 30.0%
!! AGAGATAGAAAGTATCCAAA+TGG - chr2_4:41148512-41148531 Msa0328550:intron 30.0%
!! GAGATAGAAAGTATCCAAAT+GGG - chr2_4:41148513-41148532 Msa0328550:intron 30.0%
AACTCTCAAAAGAAACAAGT+TGG - chr2_4:41148599-41148618 Msa0328550:intron 30.0%
ATATTCATGCATAACCCAAT+TGG + chr2_4:41148678-41148697 None:intergenic 30.0%
CTTAATATGTACCTTCAAAG+AGG + chr2_4:41148735-41148754 None:intergenic 30.0%
! TTCGTGAGAGAATTTGAAAT+TGG - chr2_4:41148815-41148834 Msa0328550:intron 30.0%
TAAGAAGGAATATGTTAGCT+TGG - chr2_4:41148894-41148913 Msa0328550:intron 30.0%
!!! ACTAGGGTTTTGAAGAAAAT+AGG - chr2_4:41148970-41148989 Msa0328550:intron 30.0%
CATTAACTCCTAATTAGAAG+GGG + chr2_4:41149187-41149206 None:intergenic 30.0%
TTAAAGCAAGCACTAAACAA+CGG + chr2_4:41149406-41149425 None:intergenic 30.0%
! TGTATATCACTAGTCTATAC+AGG - chr2_4:41149435-41149454 Msa0328550:intron 30.0%
ACAAGATTGGAAAAGGAAAA+GGG + chr2_4:41149708-41149727 None:intergenic 30.0%
AACAAGATTGGAAAAGGAAA+AGG + chr2_4:41149709-41149728 None:intergenic 30.0%
GAAAATTCGACACAATGAAT+AGG + chr2_4:41149901-41149920 None:intergenic 30.0%
TAATGAAGAGGAACAAGTTA+AGG - chr2_4:41149950-41149969 Msa0328550:intron 30.0%
ACAAGTTAAGGATACAAAGA+AGG - chr2_4:41149962-41149981 Msa0328550:intron 30.0%
AAGAGAAGTAATGCAAACTA+TGG - chr2_4:41150046-41150065 Msa0328550:intron 30.0%
ATGTAATAATATACCCACAG+AGG - chr2_4:41150163-41150182 Msa0328550:three_prime_UTR 30.0%
!! TTCAGCTATTTCTTATCCAA+TGG - chr2_4:41150223-41150242 Msa0328550:three_prime_UTR 30.0%
!! TCAGCTATTTCTTATCCAAT+GGG - chr2_4:41150224-41150243 Msa0328550:three_prime_UTR 30.0%
CTACCCTTCAAATTTATTTC+AGG - chr2_4:41150253-41150272 Msa0328550:intron 30.0%
GACATATGAAAAAGCAAAAG+TGG - chr2_4:41150507-41150526 Msa0328550:intron 30.0%
CATATGAAAAAGCAAAAGTG+GGG - chr2_4:41150509-41150528 Msa0328550:intron 30.0%
TGATTAATACATAATAGGGC+TGG + chr2_4:41150647-41150666 None:intergenic 30.0%
! TCTCTCTCTCTAATTTTCAT+TGG + chr2_4:41150778-41150797 None:intergenic 30.0%
GATCTTAAAGTGATGAAAGT+TGG - chr2_4:41150912-41150931 Msa0328550:intron 30.0%
ATGGTGAAGAAAAGCTAAAT+TGG + chr2_4:41151000-41151019 None:intergenic 30.0%
GAGTAAAGAGATCTTTACTT+TGG + chr2_4:41151066-41151085 None:intergenic 30.0%
AAAGATGTATCTTAGTGGTT+TGG + chr2_4:41151141-41151160 None:intergenic 30.0%
AAGCTAAAGATGTATCTTAG+TGG + chr2_4:41151146-41151165 None:intergenic 30.0%
GAGCAATATATGCATTTGAT+TGG - chr2_4:41151277-41151296 Msa0328550:intron 30.0%
GCAATATATGCATTTGATTG+GGG - chr2_4:41151279-41151298 Msa0328550:intron 30.0%
ATTTCTATTGTAGAGGCTTT+AGG + chr2_4:41151377-41151396 None:intergenic 30.0%
!! TAGGGTTATTTCTATTGTAG+AGG + chr2_4:41151384-41151403 None:intergenic 30.0%
TTGGAACTAAAGTTACTCTT+GGG + chr2_4:41151432-41151451 None:intergenic 30.0%
ATTGGAACTAAAGTTACTCT+TGG + chr2_4:41151433-41151452 None:intergenic 30.0%
! AACTTTAGTTCCAATTAGCT+AGG - chr2_4:41151438-41151457 Msa0328550:intron 30.0%
TATTAAGATGCCTAGCTAAT+TGG + chr2_4:41151451-41151470 None:intergenic 30.0%
! AATGATGATGTTGCATTAAG+GGG + chr2_4:41151529-41151548 None:intergenic 30.0%
GAAAAAGTAGGAAGGAAAAA+AGG + chr2_4:41151667-41151686 None:intergenic 30.0%
ATAAGAGAGAAAAAGTAGGA+AGG + chr2_4:41151675-41151694 None:intergenic 30.0%
AGGAATAAGAGAGAAAAAGT+AGG + chr2_4:41151679-41151698 None:intergenic 30.0%
AGAATGAGGGAAATTATTGT+TGG + chr2_4:41151704-41151723 None:intergenic 30.0%
TCTCATCCCAAATTGAAATA+CGG - chr2_4:41151739-41151758 Msa0328550:intron 30.0%
AGGAAACCGTATTTCAATTT+GGG + chr2_4:41151748-41151767 None:intergenic 30.0%
GACAAAAAAAGATGAAAACG+AGG - chr2_4:41151935-41151954 Msa0328550:intron 30.0%
! ATGCATCCCATTTTCATTTT+CGG - chr2_4:41152231-41152250 Msa0328550:intron 30.0%
!! ATGTGAGTAGTTTTCTAGAA+AGG + chr2_4:41152385-41152404 None:intergenic 30.0%
AAGAATAGGAGAAGAAGATA+TGG - chr2_4:41152519-41152538 Msa0328550:intron 30.0%
!!! CTTTTTTATTTGCAGGTGTA+AGG - chr2_4:41152646-41152665 Msa0328550:intron 30.0%
GTGTAAGGAAAAACAAAGAA+AGG - chr2_4:41152661-41152680 Msa0328550:intron 30.0%
TTATTACATACTCTGAATCC+GGG + chr2_4:41152690-41152709 None:intergenic 30.0%
TCGATTCACATTTCAGAAAT+TGG + chr2_4:41152979-41152998 None:intergenic 30.0%
! ACAAATTTTTACTTGGGAGA+GGG + chr2_4:41153074-41153093 None:intergenic 30.0%
! AACAAATTTTTACTTGGGAG+AGG + chr2_4:41153075-41153094 None:intergenic 30.0%
TGCACACTTTATAACAAGAA+TGG - chr2_4:41153098-41153117 Msa0328550:intron 30.0%
ATAACAAGAATGGATGCATA+AGG - chr2_4:41153108-41153127 Msa0328550:intron 30.0%
TCTTGATTAGTGACACTTTA+GGG - chr2_4:41153265-41153284 Msa0328550:CDS 30.0%
TGAATCCAACTTATTACCTT+TGG + chr2_4:41153359-41153378 None:intergenic 30.0%
TTCATTACTACTCATCTGTA+AGG - chr2_4:41153398-41153417 Msa0328550:CDS 30.0%
! TATTTGAGATAAAGACCTTG+AGG - chr2_4:41153554-41153573 Msa0328550:intron 30.0%
TAGGAAATAAAGTTACCTCA+AGG + chr2_4:41153572-41153591 None:intergenic 30.0%
! ATAGCTCTACCTTACAAATA+TGG - chr2_4:41153714-41153733 Msa0328550:intron 30.0%
TTTGTGGTTCCATATTTGTA+AGG + chr2_4:41153726-41153745 None:intergenic 30.0%
! TTATGAATGATGATTTGGCA+AGG + chr2_4:41153786-41153805 None:intergenic 30.0%
ATAACATTGCTTATGTGTCA+AGG + chr2_4:41153843-41153862 None:intergenic 30.0%
! TCTTTTACCTTCAGTCTTTT+TGG - chr2_4:41153998-41154017 Msa0328550:intron 30.0%
CTGGGTTTATTACTTGAAAA+TGG - chr2_4:41154113-41154132 Msa0328550:intron 30.0%
TAACTGCAACAATAGAAAAG+AGG + chr2_4:41154206-41154225 None:intergenic 30.0%
CTAACTATTGAAACGAATCA+TGG - chr2_4:41154251-41154270 Msa0328550:intron 30.0%
TCATGGGATGTTATTATTGA+TGG - chr2_4:41154268-41154287 Msa0328550:intron 30.0%
CATGGGATGTTATTATTGAT+GGG - chr2_4:41154269-41154288 Msa0328550:intron 30.0%
GTAACTTTATATGAACCTGT+TGG - chr2_4:41154438-41154457 Msa0328550:intron 30.0%
! TTATATGAACCTGTTGGTAA+AGG - chr2_4:41154444-41154463 Msa0328550:intron 30.0%
AGGTCAATATTATTTGCTCT+TGG - chr2_4:41154485-41154504 Msa0328550:intron 30.0%
TTTCTATTGCTCAAAAACAC+GGG - chr2_4:41154708-41154727 Msa0328550:intron 30.0%
CAACAAGTTCTTCATCTGTA+GGG + chr2_4:41148220-41148239 None:intergenic 35.0%
AAGATCATTTCTTCCTAGCA+AGG - chr2_4:41148463-41148482 Msa0328550:intron 35.0%
ATTTCTTCCTAGCAAGGATA+TGG - chr2_4:41148469-41148488 Msa0328550:intron 35.0%
CTATTTGTTCTTGACCCATT+TGG + chr2_4:41148530-41148549 None:intergenic 35.0%
AGAACAAATAGAGCAACAAG+AGG - chr2_4:41148539-41148558 Msa0328550:intron 35.0%
GAAAGCAACTGGAAAAGATA+GGG - chr2_4:41148571-41148590 Msa0328550:intron 35.0%
TCATGGGATTAGAACCAATT+GGG - chr2_4:41148661-41148680 Msa0328550:intron 35.0%
! AACAGTTGATTTCGGTTGTT+AGG - chr2_4:41149034-41149053 Msa0328550:intron 35.0%
GGTTGCTGTATACAAATAGT+AGG - chr2_4:41149055-41149074 Msa0328550:three_prime_UTR 35.0%
TTCATAGATGGAACCCTAAA+AGG - chr2_4:41149353-41149372 Msa0328550:three_prime_UTR 35.0%
!! GTTTTGAACCTTGTTCTACA+AGG - chr2_4:41149523-41149542 Msa0328550:intron 35.0%
GAACATATAGTGACTAGTGT+AGG + chr2_4:41149558-41149577 None:intergenic 35.0%
GGATACAAAGAAGGAAATGA+TGG - chr2_4:41149971-41149990 Msa0328550:intron 35.0%
TCTTAGAAGAACAAGTGCAA+GGG - chr2_4:41149994-41150013 Msa0328550:intron 35.0%
!! GAAGCATCACATGGAAATTT+TGG + chr2_4:41150101-41150120 None:intergenic 35.0%
TGCTACAAACATGGAGAAAA+AGG + chr2_4:41150583-41150602 None:intergenic 35.0%
GAGCATAAATGCTACAAACA+TGG + chr2_4:41150592-41150611 None:intergenic 35.0%
GAAATGCAGAGTATAAGCAA+AGG + chr2_4:41150625-41150644 None:intergenic 35.0%
!! GCTCACTTCTAAAATTCACT+TGG - chr2_4:41150967-41150986 Msa0328550:intron 35.0%
!! TTTACTCCCATTTTTCCTCA+CGG - chr2_4:41151079-41151098 Msa0328550:intron 35.0%
AACAAACCGTGAGGAAAAAT+GGG + chr2_4:41151088-41151107 None:intergenic 35.0%
TAACAAACCGTGAGGAAAAA+TGG + chr2_4:41151089-41151108 None:intergenic 35.0%
!! ATTTTTCCTCACGGTTTGTT+AGG - chr2_4:41151088-41151107 Msa0328550:intron 35.0%
AATTGAAGAGGGAAAATGAG+AGG + chr2_4:41151615-41151634 None:intergenic 35.0%
! GAGGGAAATTATTGTTGGTT+AGG + chr2_4:41151699-41151718 None:intergenic 35.0%
GAGGAAACCGTATTTCAATT+TGG + chr2_4:41151749-41151768 None:intergenic 35.0%
GGAGAGAAAGAAAGAAATGA+TGG + chr2_4:41151796-41151815 None:intergenic 35.0%
!!! CTTTTTTTGTCGATGGAGAT+TGG + chr2_4:41151926-41151945 None:intergenic 35.0%
! TCTTCTTCTGTGACTTGTAA+AGG + chr2_4:41152118-41152137 None:intergenic 35.0%
AAGAAGTCCTGAAAGAATCA+AGG - chr2_4:41152149-41152168 Msa0328550:intron 35.0%
AGTTTCACCTTGATTCTTTC+AGG + chr2_4:41152159-41152178 None:intergenic 35.0%
TCATAATACACATCACCGTA+GGG + chr2_4:41152557-41152576 None:intergenic 35.0%
ATCATAATACACATCACCGT+AGG + chr2_4:41152558-41152577 None:intergenic 35.0%
AAAAACAAAGAAAGGCTACC+CGG - chr2_4:41152669-41152688 Msa0328550:intron 35.0%
!! AATGGATGCATAAGGTGTTT+TGG - chr2_4:41153116-41153135 Msa0328550:intron 35.0%
CTCTTGATTAGTGACACTTT+AGG - chr2_4:41153264-41153283 Msa0328550:CDS 35.0%
TCAATTCTCTGTACCTTTGA+AGG - chr2_4:41153879-41153898 Msa0328550:intron 35.0%
CAGTATAACATTGCCTTCAA+AGG + chr2_4:41153895-41153914 None:intergenic 35.0%
TCGCAATATAAAGGATCTCA+AGG + chr2_4:41153937-41153956 None:intergenic 35.0%
TTGCAATCCAAAAAGACTGA+AGG + chr2_4:41154008-41154027 None:intergenic 35.0%
TGTGTAATCAGATGAAGCAT+AGG + chr2_4:41154048-41154067 None:intergenic 35.0%
TTCTTGACTTCTCAAATCTC+TGG - chr2_4:41154094-41154113 Msa0328550:intron 35.0%
TCTTGACTTCTCAAATCTCT+GGG - chr2_4:41154095-41154114 Msa0328550:intron 35.0%
!! TGAAAATGGTGTTGTACTAC+TGG - chr2_4:41154127-41154146 Msa0328550:intron 35.0%
!! GAAAATGGTGTTGTACTACT+GGG - chr2_4:41154128-41154147 Msa0328550:intron 35.0%
GTACCTGCAAACAAAATTAG+AGG + chr2_4:41154232-41154251 None:intergenic 35.0%
! TGGTTCACATTTTGTGATTG+AGG - chr2_4:41154373-41154392 Msa0328550:intron 35.0%
!!! TCTTTTATTCACTTTGAGGC+AGG - chr2_4:41154416-41154435 Msa0328550:intron 35.0%
! TAGTCTTTTCCTTTACCAAC+AGG + chr2_4:41154456-41154475 None:intergenic 35.0%
GGAAAAGACTATCCTTTCTA+AGG - chr2_4:41154465-41154484 Msa0328550:intron 35.0%
TTCATAGGTCAATTCATTGG+AGG - chr2_4:41154631-41154650 Msa0328550:intron 35.0%
GCAACAAGTTCTTCATCTGT+AGG + chr2_4:41148221-41148240 None:intergenic 40.0%
AATGTACCTGGTAAATCCCA+AGG + chr2_4:41148323-41148342 None:intergenic 40.0%
ACAAATAGAGCAACAAGAGG+TGG - chr2_4:41148542-41148561 Msa0328550:intron 40.0%
GGAAAGCAACTGGAAAAGAT+AGG - chr2_4:41148570-41148589 Msa0328550:intron 40.0%
!! CAATTGGTTCTAATCCCATG+AGG + chr2_4:41148662-41148681 None:intergenic 40.0%
CTCATGGGATTAGAACCAAT+TGG - chr2_4:41148660-41148679 Msa0328550:intron 40.0%
CGACTTATTGAATCACATCC+TGG - chr2_4:41148698-41148717 Msa0328550:intron 40.0%
! AGGAGGGAAACAGTTGATTT+CGG - chr2_4:41149026-41149045 Msa0328550:intron 40.0%
TGTGTTGTCCCCTTCTAATT+AGG - chr2_4:41149176-41149195 Msa0328550:intron 40.0%
ATGTGCATCCTTGTAGAACA+AGG + chr2_4:41149534-41149553 None:intergenic 40.0%
GTCTTAGAAGAACAAGTGCA+AGG - chr2_4:41149993-41150012 Msa0328550:intron 40.0%
CTTAGAAGAACAAGTGCAAG+GGG - chr2_4:41149995-41150014 Msa0328550:intron 40.0%
!! TCAGATGAAGAAGCATCACA+TGG + chr2_4:41150110-41150129 None:intergenic 40.0%
ATGTGATGCTTCTTCATCTG+AGG - chr2_4:41150109-41150128 Msa0328550:three_prime_UTR 40.0%
TGTGCATGAAAATCCTCTGT+GGG + chr2_4:41150179-41150198 None:intergenic 40.0%
TTGTGCATGAAAATCCTCTG+TGG + chr2_4:41150180-41150199 None:intergenic 40.0%
TTGAAACCTAACAAACCGTG+AGG + chr2_4:41151097-41151116 None:intergenic 40.0%
CAAGTGGCAAAAGAAGAGTA+GGG + chr2_4:41151402-41151421 None:intergenic 40.0%
TTTAGACCTCCAATCCAATG+TGG - chr2_4:41151492-41151511 Msa0328550:intron 40.0%
AGTTTGAAGAGAGAGATGAG+AGG + chr2_4:41151768-41151787 None:intergenic 40.0%
AGAGAGAGAGAGAACGAAAA+TGG + chr2_4:41151820-41151839 None:intergenic 40.0%
CAGAGAGACGAAAGAAGAAA+TGG + chr2_4:41151877-41151896 None:intergenic 40.0%
ACGAGGAAGAAGAAGAAGTA+AGG - chr2_4:41151952-41151971 Msa0328550:intron 40.0%
AAACCTTATCCCACTAAGTG+GGG + chr2_4:41152337-41152356 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG + chr2_4:41152338-41152357 None:intergenic 40.0%
! TAACTAGAGGTCGAGTTTTG+AGG - chr2_4:41152760-41152779 Msa0328550:intron 40.0%
TGAAGGGAAAAAAAACTGGG+TGG - chr2_4:41152803-41152822 Msa0328550:intron 40.0%
!! ATATAAATTGCAGGGGCGTT+TGG - chr2_4:41153169-41153188 Msa0328550:CDS 40.0%
!! TATAAATTGCAGGGGCGTTT+GGG - chr2_4:41153170-41153189 Msa0328550:CDS 40.0%
GTTGAATCATTCACCATAGG+AGG - chr2_4:41153193-41153212 Msa0328550:CDS 40.0%
TTTCTGCTAAAAGCCTCCTA+TGG + chr2_4:41153209-41153228 None:intergenic 40.0%
!! GCTCCTCTAATTTTGTTTGC+AGG - chr2_4:41154226-41154245 Msa0328550:intron 40.0%
GCTTCTTCTTTGGATTGTTG+TGG + chr2_4:41154310-41154329 None:intergenic 40.0%
TTTGACAAGAAAAACACGGG+AGG - chr2_4:41154739-41154758 Msa0328550:intron 40.0%
GAAAAACACGGGAGGTTATA+AGG - chr2_4:41154747-41154766 Msa0328550:CDS 40.0%
TCAATTTGCCCCCAAAAACA+CGG - chr2_4:41154833-41154852 Msa0328550:CDS 40.0%
! AGTAAACCTGCCGTGTTTTT+GGG + chr2_4:41154846-41154865 None:intergenic 40.0%
! AAGTAAACCTGCCGTGTTTT+TGG + chr2_4:41154847-41154866 None:intergenic 40.0%
CTTATGCACTCCCAAAAACT+TGG + chr2_4:41155040-41155059 None:intergenic 40.0%
AATCCAGGTGGAAGAGTCAT+TGG + chr2_4:41148188-41148207 None:intergenic 45.0%
CAAGTTCTTCATCTGTAGGG+TGG + chr2_4:41148217-41148236 None:intergenic 45.0%
TGTGAACCTTGGGATTTACC+AGG - chr2_4:41148314-41148333 Msa0328550:three_prime_UTR 45.0%
TTCCTAGCAAGGATATGGAG+TGG - chr2_4:41148474-41148493 Msa0328550:intron 45.0%
TACCACTCCATATCCTTGCT+AGG + chr2_4:41148479-41148498 None:intergenic 45.0%
GAGCAACAAGAGGTGGTTAT+TGG - chr2_4:41148549-41148568 Msa0328550:intron 45.0%
GGTGGTTATTGGAAAGCAAC+TGG - chr2_4:41148560-41148579 Msa0328550:intron 45.0%
! TACAAAGGTAGAGCACCTCA+TGG - chr2_4:41148644-41148663 Msa0328550:intron 45.0%
! ACAAAGGTAGAGCACCTCAT+GGG - chr2_4:41148645-41148664 Msa0328550:intron 45.0%
TGCTTCTCTCTCCTCTTTGA+AGG - chr2_4:41148721-41148740 Msa0328550:intron 45.0%
! TCTTCATCTGAGGTCACTCA+AGG - chr2_4:41150119-41150138 Msa0328550:three_prime_UTR 45.0%
GAAGGGTAGCTTATTCCCAT+TGG + chr2_4:41150242-41150261 None:intergenic 45.0%
GCAAGTGGCAAAAGAAGAGT+AGG + chr2_4:41151403-41151422 None:intergenic 45.0%
ACTCTTGGGAATAGTGCAAG+TGG + chr2_4:41151418-41151437 None:intergenic 45.0%
GAGAGAGAGAACGAAAATGG+TGG + chr2_4:41151817-41151836 None:intergenic 45.0%
!! GCGCTGGTGATTGATTTTGT+TGG + chr2_4:41151904-41151923 None:intergenic 45.0%
CACAGAAGAAGAAGAAGCTG+AGG - chr2_4:41152126-41152145 Msa0328550:intron 45.0%
CCAAACCTTATCCCACTAAG+TGG + chr2_4:41152339-41152358 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG - chr2_4:41152336-41152355 Msa0328550:intron 45.0%
TGGTTTCGTTTCAGACCCTA+CGG - chr2_4:41152539-41152558 Msa0328550:intron 45.0%
!! ATAAATTGCAGGGGCGTTTG+GGG - chr2_4:41153171-41153190 Msa0328550:CDS 45.0%
GGGGTTGAATCATTCACCAT+AGG - chr2_4:41153190-41153209 Msa0328550:CDS 45.0%
CAGATGAAGCATAGGCAATC+AGG + chr2_4:41154040-41154059 None:intergenic 45.0%
CTATTGCTCAAAAACACGGG+AGG - chr2_4:41154711-41154730 Msa0328550:intron 45.0%
!!! TAAACCTGCCGTGTTTTTGG+GGG + chr2_4:41154844-41154863 None:intergenic 45.0%
!! GTAAACCTGCCGTGTTTTTG+GGG + chr2_4:41154845-41154864 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTACTTA+AGG - chr2_4:41149211-41149230 Msa0328550:intron 5.0%
TGACTCTTCCACCTGGATTC+AGG - chr2_4:41148189-41148208 Msa0328550:three_prime_UTR 50.0%
!! AAAGAGGAGAGAGAAGCACC+AGG + chr2_4:41148719-41148738 None:intergenic 50.0%
GACAGCAACACACCCTTCTA+CGG - chr2_4:41152201-41152220 Msa0328550:intron 50.0%
TGCATACCTCAGCCGTAGAA+GGG + chr2_4:41152216-41152235 None:intergenic 50.0%
ATGCATACCTCAGCCGTAGA+AGG + chr2_4:41152217-41152236 None:intergenic 50.0%
!! ACTAAGTGGGGTTGGCTACA+TGG + chr2_4:41152325-41152344 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG - chr2_4:41152324-41152343 Msa0328550:intron 50.0%
TGTAGCCAACCCCACTTAGT+GGG - chr2_4:41152325-41152344 Msa0328550:intron 50.0%
CTTATCCCACTAAGTGGGGT+TGG + chr2_4:41152333-41152352 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG - chr2_4:41152331-41152350 Msa0328550:intron 50.0%
GCTCCAATGACTCTTCCACC+TGG - chr2_4:41148182-41148201 Msa0328550:three_prime_UTR 55.0%
GTAGGGTGGAACCTGAATCC+AGG + chr2_4:41148203-41148222 None:intergenic 55.0%
GTGCAAGGGGAAGACTCAAG+TGG - chr2_4:41150008-41150027 Msa0328550:intron 55.0%
CAAGGGGAAGACTCAAGTGG+TGG - chr2_4:41150011-41150030 Msa0328550:intron 55.0%
! AGCTCGCCACATTGGATTGG+AGG + chr2_4:41151501-41151520 None:intergenic 55.0%
GAGAGCTCGCCACATTGGAT+TGG + chr2_4:41151504-41151523 None:intergenic 55.0%
TTGTCGATGGAGATTGGCGC+TGG + chr2_4:41151920-41151939 None:intergenic 55.0%
AACACACCCTTCTACGGCTG+AGG - chr2_4:41152207-41152226 Msa0328550:intron 55.0%
TTTGCCCCCAAAAACACGGC+AGG - chr2_4:41154837-41154856 Msa0328550:CDS 55.0%
GGGTGGAACCTGAATCCAGG+TGG + chr2_4:41148200-41148219 None:intergenic 60.0%
GGGTTGAGAGCTCGCCACAT+TGG + chr2_4:41151509-41151528 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 41148179 41155250 41148179 ID=Msa0328550;Name=Msa0328550
chr2_4 mRNA 41148179 41155250 41148179 ID=Msa0328550-mRNA-1;Parent=Msa0328550;Name=Msa0328550-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.62|0.66|1|0.37|0.33|9|758|254
chr2_4 exon 41148179 41148449 41148179 ID=Msa0328550-mRNA-1:exon:12664;Parent=Msa0328550-mRNA-1
chr2_4 exon 41149035 41149181 41149035 ID=Msa0328550-mRNA-1:exon:12663;Parent=Msa0328550-mRNA-1
chr2_4 exon 41149349 41149417 41149349 ID=Msa0328550-mRNA-1:exon:12662;Parent=Msa0328550-mRNA-1
chr2_4 exon 41149854 41149908 41149854 ID=Msa0328550-mRNA-1:exon:12661;Parent=Msa0328550-mRNA-1
chr2_4 exon 41150068 41150247 41150068 ID=Msa0328550-mRNA-1:exon:12660;Parent=Msa0328550-mRNA-1
chr2_4 exon 41150727 41150768 41150727 ID=Msa0328550-mRNA-1:exon:12659;Parent=Msa0328550-mRNA-1
chr2_4 exon 41153155 41153535 41153155 ID=Msa0328550-mRNA-1:exon:12658;Parent=Msa0328550-mRNA-1
chr2_4 exon 41154747 41154967 41154747 ID=Msa0328550-mRNA-1:exon:12657;Parent=Msa0328550-mRNA-1
chr2_4 exon 41155094 41155250 41155094 ID=Msa0328550-mRNA-1:exon:12656;Parent=Msa0328550-mRNA-1
chr2_4 CDS 41155094 41155250 41155094 ID=Msa0328550-mRNA-1:cds;Parent=Msa0328550-mRNA-1
chr2_4 CDS 41154747 41154967 41154747 ID=Msa0328550-mRNA-1:cds;Parent=Msa0328550-mRNA-1
chr2_4 CDS 41153155 41153535 41153155 ID=Msa0328550-mRNA-1:cds;Parent=Msa0328550-mRNA-1
chr2_4 CDS 41150763 41150768 41150763 ID=Msa0328550-mRNA-1:cds;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41150727 41150762 41150727 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41150068 41150247 41150068 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41149854 41149908 41149854 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41149349 41149417 41149349 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41149035 41149181 41149035 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
chr2_4 three_prime_UTR 41148179 41148449 41148179 ID=Msa0328550-mRNA-1:three_prime_utr;Parent=Msa0328550-mRNA-1
Gene Sequence

>Msa0328550

ATGGCTCCAATGACTCTTCCACCTGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGAAGAACTATAGAGCTTGATATCATTGCAGAAGTTGATCTCTATAAATGTGAACCTTGGGATTTACCAGAAAGATCATTTCTTCCTAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGGGCAGTGAACTCTCAAAAGAAACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGATTCCTATTCATTGTGTCGAATTTTCAAGAAGACAATTCAAATTCCAACAAAAAATAATGAAGAGGAACAAGTTAAGGATACAAAGAAGGAAATGATGGTCTTAGAAGAACAAGTGCAAGGGGAAGACTCAAGTGGTGGCACAGAGATTTCAAGAGAAGTAATGCAAACTATGGATGAAAAAATTCTTAATCAAGATAAACATCCAAAATTTCCATGTGATGCTTCTTCATCTGAGGTCACTCAAGGAACATGTACACCAACAGATACATGTAATAATATACCCACAGAGGATTTTCATGCACAATTTGCCTATGAAGAAGAAAATAGTTCAGCTATTTCTTATCCAATGGGAATAAGCTACCCTTCAAATTTATTTCAGGTGTAA
Protein sequence

>Msa0328550

MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPERSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKKQVGMKKTLVYYKGRAPHGIRTNWDSYSLCRIFKKTIQIPTKNNEEEQVKDTKKEMMVLEEQVQGEDSSGGTEISREVMQTMDEKILNQDKHPKFPCDASSSEVTQGTCTPTDTCNNIPTEDFHAQFAYEEENSSAISYPMGISYPSNLFQV*