Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086790 | G7IES3 | 89.348 | 629 | 45 | 3 | 1 | 607 | 1 | 629 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0086790 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053810 | Msa0086790 | 0.840910 | 6.539222e-58 | -8.615850e-47 |
| Msa0079720 | Msa0086790 | 0.812390 | 4.343048e-51 | -8.615850e-47 |
| Msa0086790 | Msa0106620 | 0.850280 | 1.881107e-60 | -8.615850e-47 |
| Msa0086790 | Msa0106710 | 0.844282 | 8.326239e-59 | -8.615850e-47 |
| Msa0086790 | Msa0124320 | 0.805916 | 1.059254e-49 | -8.615850e-47 |
| Msa0086790 | Msa0141400 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
| Msa0086790 | Msa0189710 | 0.808759 | 2.644801e-50 | -8.615850e-47 |
| Msa0086790 | Msa0232020 | 0.821241 | 4.481826e-53 | -8.615850e-47 |
| Msa0086790 | Msa0232090 | 0.811482 | 6.848649e-51 | -8.615850e-47 |
| Msa0086790 | Msa0237210 | 0.800625 | 1.319839e-48 | -8.615850e-47 |
| Msa0086790 | Msa0244970 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0086790 | Msa0249310 | 0.823833 | 1.119214e-53 | -8.615850e-47 |
| Msa0086790 | Msa0269560 | 0.807236 | 5.577469e-50 | -8.615850e-47 |
| Msa0086790 | Msa0287790 | 0.814046 | 1.880314e-51 | -8.615850e-47 |
| Msa0086790 | Msa0310090 | 0.811525 | 6.703490e-51 | -8.615850e-47 |
| Msa0086790 | Msa0321690 | 0.807000 | 6.259889e-50 | -8.615850e-47 |
| Msa0086790 | Msa0362890 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0086790 | Msa0382370 | 0.803760 | 2.988705e-49 | -8.615850e-47 |
| Msa0086790 | Msa0389910 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa0086790 | Msa0395980 | 0.814629 | 1.397515e-51 | -8.615850e-47 |
| Msa0086790 | Msa0402190 | 0.808833 | 2.549794e-50 | -8.615850e-47 |
| Msa0086790 | Msa0423030 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0086790 | Msa0430060 | 0.804561 | 2.036044e-49 | -8.615850e-47 |
| Msa0086790 | Msa0430150 | 0.800958 | 1.128888e-48 | -8.615850e-47 |
| Msa0086790 | Msa0440510 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0086790 | Msa0450400 | -0.802850 | 4.613694e-49 | -8.615850e-47 |
| Msa0086790 | Msa0476680 | 0.806060 | 9.881031e-50 | -8.615850e-47 |
| Msa0086790 | Msa0491000 | 0.800371 | 1.487185e-48 | -8.615850e-47 |
| Msa0086790 | Msa0521010 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0086790 | Msa0626460 | 0.809929 | 1.483931e-50 | -8.615850e-47 |
| Msa0086790 | Msa0661630 | 0.816259 | 6.063885e-52 | -8.615850e-47 |
| Msa0086790 | Msa0664540 | 0.828743 | 7.587752e-55 | -8.615850e-47 |
| Msa0086790 | Msa0756380 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0086790 | Msa0855870 | 0.816491 | 5.381430e-52 | -8.615850e-47 |
| Msa0086790 | Msa0933760 | 0.827828 | 1.261308e-54 | -8.615850e-47 |
| Msa0086790 | Msa0934140 | 0.827536 | 1.482236e-54 | -8.615850e-47 |
| Msa0086790 | Msa0971650 | 0.827283 | 1.703920e-54 | -8.615850e-47 |
| Msa0086790 | Msa1158390 | 0.809197 | 2.131674e-50 | -8.615850e-47 |
| Msa0086790 | Msa1188180 | 0.812513 | 4.081546e-51 | -8.615850e-47 |
| Msa0086790 | Msa1201640 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0086790 | Msa1226270 | 0.802096 | 6.596609e-49 | -8.615850e-47 |
| Msa0086790 | Msa1236440 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0086790 | Msa1283740 | 0.830247 | 3.270648e-55 | -8.615850e-47 |
| Msa0086790 | Msa1340200 | 0.816137 | 6.456538e-52 | -8.615850e-47 |
| Msa0086790 | Msa1392210 | 0.815944 | 7.129950e-52 | -8.615850e-47 |
| Msa0086790 | Msa1463030 | 0.804874 | 1.752172e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086790 | MtrunA17_Chr1g0202961 | 89.348 | 629 | 45 | 3 | 1 | 607 | 1 | 629 | 0.0 | 1154 |
| Msa0086790 | MtrunA17_Chr6g0470531 | 48.025 | 633 | 243 | 13 | 1 | 581 | 1 | 599 | 2.58e-171 | 504 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086790 | AT4G25610.1 | 42.984 | 563 | 225 | 17 | 18 | 558 | 6 | 494 | 1.87e-123 | 377 |
| Msa0086790 | AT4G25610.3 | 42.984 | 563 | 225 | 17 | 18 | 558 | 6 | 494 | 1.87e-123 | 377 |
| Msa0086790 | AT4G25610.2 | 43.423 | 555 | 234 | 17 | 18 | 558 | 6 | 494 | 4.30e-123 | 375 |
Find 160 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGGTTCTTTGTGCAATT+TGG | 0.077562 | 1_2:-67534347 | None:intergenic |
| GTCTTCCGGTTTCATAAAAT+TGG | 0.103009 | 1_2:-67529615 | None:intergenic |
| AAAACCACTGTATCAATTTC+TGG | 0.125076 | 1_2:-67534319 | None:intergenic |
| CAATTTCTGGTTTAGGTTTC+CGG | 0.152003 | 1_2:-67534306 | None:intergenic |
| CGAGAATATTGAACAACTTT+TGG | 0.177844 | 1_2:-67531923 | None:intergenic |
| TGTCGGTGCAAAGTAATTTA+AGG | 0.194876 | 1_2:+67534659 | Msa0086790:CDS |
| TTTATGCCTTCTGTAATTAA+TGG | 0.195529 | 1_2:-67530127 | None:intergenic |
| CTGGTTCCATTTCCATATTT+TGG | 0.202534 | 1_2:-67534259 | None:intergenic |
| TAAAATTTCTTGGTTAGGTT+TGG | 0.228309 | 1_2:+67529549 | Msa0086790:five_prime_UTR |
| GAACAACTTCGTAGAGAATT+TGG | 0.232636 | 1_2:+67534462 | Msa0086790:CDS |
| CAGGGCTGGTTTCTCCCTTT+TGG | 0.236355 | 1_2:+67531758 | Msa0086790:CDS |
| CCTCCTCCACCAGCAGCTTC+TGG | 0.246352 | 1_2:-67533180 | None:intergenic |
| TCTGGTTCTTTGTGCAATTT+GGG | 0.246471 | 1_2:-67534346 | None:intergenic |
| AAGCCTTCTGAATCTGCTTT+TGG | 0.247089 | 1_2:-67534736 | None:intergenic |
| GCTTCTCCTGACCAATATTC+TGG | 0.255812 | 1_2:-67534489 | None:intergenic |
| TGAAAGGAGTCAGGTTTAAT+TGG | 0.262890 | 1_2:-67534511 | None:intergenic |
| GGGAATCCTGTAAAATTTCT+TGG | 0.274546 | 1_2:+67529539 | Msa0086790:five_prime_UTR |
| TCTGGAGTCATTCCAAAATA+TGG | 0.277515 | 1_2:+67534247 | Msa0086790:CDS |
| GAAAATGGCATAGAAGTTAA+AGG | 0.285683 | 1_2:+67533878 | Msa0086790:CDS |
| AAAATTTCTTGGTTAGGTTT+GGG | 0.290950 | 1_2:+67529550 | Msa0086790:five_prime_UTR |
| TTTCTTGCTAGAGCAGAAAT+TGG | 0.306159 | 1_2:+67532064 | Msa0086790:CDS |
| TTTAGTAGTTGAACCTTTGC+AGG | 0.320130 | 1_2:-67530066 | None:intergenic |
| TTATGCCTTCTGTAATTAAT+GGG | 0.334508 | 1_2:-67530126 | None:intergenic |
| ACTGTATCAATTTCTGGTTT+AGG | 0.337996 | 1_2:-67534313 | None:intergenic |
| TTACAGACAAGCTGAGGCTT+TGG | 0.343221 | 1_2:+67533799 | Msa0086790:intron |
| GATGGAGGCAATATGGGTTA+TGG | 0.344239 | 1_2:+67534694 | Msa0086790:CDS |
| ATTAAACCTGACTCCTTTCA+TGG | 0.345827 | 1_2:+67534514 | Msa0086790:CDS |
| GCGAGGGACCAACTTGAAAA+TGG | 0.348958 | 1_2:+67533863 | Msa0086790:CDS |
| GTTATGATTGTGACATTAAT+CGG | 0.349432 | 1_2:+67534092 | Msa0086790:CDS |
| GATGGAGAGGCTGGAAAGAT+TGG | 0.351412 | 1_2:+67532008 | Msa0086790:CDS |
| TTCCTTTCCTTTCCTAGGGC+TGG | 0.354526 | 1_2:+67529689 | Msa0086790:CDS |
| TCGTGAGTCTTAACTTCATC+TGG | 0.355533 | 1_2:-67534364 | None:intergenic |
| CTTCTGGCATTTCAATGCTT+CGG | 0.356524 | 1_2:-67533164 | None:intergenic |
| AATTTGGCAAACCAGAATAT+TGG | 0.361607 | 1_2:+67534478 | Msa0086790:CDS |
| TGATATAGATGGAGGCAATA+TGG | 0.363484 | 1_2:+67534687 | Msa0086790:CDS |
| AAGCAGATTCAGAAGGCTTT+CGG | 0.365566 | 1_2:+67534740 | Msa0086790:CDS |
| GGAAGACGGAAATGATTCTT+TGG | 0.374474 | 1_2:+67529631 | Msa0086790:CDS |
| TCCTGTAAAATTTCTTGGTT+AGG | 0.375215 | 1_2:+67529544 | Msa0086790:five_prime_UTR |
| TTAAGGTTGTGTGATATAGA+TGG | 0.376966 | 1_2:+67534676 | Msa0086790:CDS |
| ATCAGTCAGGAGTTAAGCTT+TGG | 0.382056 | 1_2:+67534545 | Msa0086790:CDS |
| ATCGCGAGAGGAACCATCTT+TGG | 0.386656 | 1_2:+67533928 | Msa0086790:CDS |
| TTCCTAGGGCTGGTGGTGAC+AGG | 0.386737 | 1_2:+67529699 | Msa0086790:CDS |
| AATGCTTTCCAGGAGGTTCC+AGG | 0.387639 | 1_2:+67531663 | Msa0086790:intron |
| TCTACACCTTCATTGGTGTC+TGG | 0.390131 | 1_2:-67533989 | None:intergenic |
| GTCATTCCAAAATATGGAAA+TGG | 0.395627 | 1_2:+67534253 | Msa0086790:CDS |
| AACTCTCAAAAGTCTAAGTC+TGG | 0.401073 | 1_2:+67534229 | Msa0086790:CDS |
| GCATCTGATTGTAATGTTTG+TGG | 0.403957 | 1_2:-67534061 | None:intergenic |
| ATTCATTTGGCAGAAATTCC+AGG | 0.405266 | 1_2:+67530027 | Msa0086790:intron |
| ATGGAGGCAATATGGGTTAT+GGG | 0.409471 | 1_2:+67534695 | Msa0086790:CDS |
| AAAGAATCATTTCCGTCTTC+CGG | 0.410730 | 1_2:-67529629 | None:intergenic |
| TGAACAAAACTCTCTGTCTT+TGG | 0.421485 | 1_2:-67530103 | None:intergenic |
| AGAATTGAAATCGGCGGCGT+AGG | 0.424060 | 1_2:-67528886 | None:intergenic |
| TTTAGGGGCATATTGGGATA+AGG | 0.425758 | 1_2:+67530347 | Msa0086790:CDS |
| ACAATAGTACGTTGCGACTT+AGG | 0.426679 | 1_2:-67534184 | None:intergenic |
| ATTGTAGTAGTCGTAGTAGT+AGG | 0.428061 | 1_2:-67528803 | None:intergenic |
| GCCGTGATAGTGGTAAAGTT+TGG | 0.430539 | 1_2:+67534281 | Msa0086790:CDS |
| CTTAGGATGCCTTAGCCGTC+TGG | 0.433778 | 1_2:-67534167 | None:intergenic |
| GAATTGAAATCGGCGGCGTA+GGG | 0.439498 | 1_2:-67528885 | None:intergenic |
| AACCATTCCTTTCCTTTCCT+AGG | 0.443817 | 1_2:+67529684 | Msa0086790:CDS |
| TTAGTTTCATGCTGGCTCAC+TGG | 0.444350 | 1_2:-67534571 | None:intergenic |
| TCTTCCGGTTTCATAAAATT+GGG | 0.452669 | 1_2:-67529614 | None:intergenic |
| ATGGAGAGGCTGGAAAGATT+GGG | 0.452673 | 1_2:+67532009 | Msa0086790:CDS |
| ATCCTCATCTACACCTTCAT+TGG | 0.453113 | 1_2:-67533996 | None:intergenic |
| ACTACTACGACTACTACAAT+AGG | 0.453527 | 1_2:+67528806 | Msa0086790:five_prime_UTR |
| TTGCCTCCATGAAAGGAGTC+AGG | 0.453534 | 1_2:-67534520 | None:intergenic |
| CCAGAAGCTGCTGGTGGAGG+AGG | 0.458809 | 1_2:+67533180 | Msa0086790:CDS |
| GATATAGATGGAGGCAATAT+GGG | 0.459827 | 1_2:+67534688 | Msa0086790:CDS |
| GAAGCTGCTGGTGGAGGAGG+AGG | 0.460524 | 1_2:+67533183 | Msa0086790:CDS |
| CCGCCGATTTCAATTCTTTG+CGG | 0.463157 | 1_2:+67528892 | Msa0086790:five_prime_UTR |
| CCACAGTATTATCTCAGGGC+TGG | 0.465461 | 1_2:+67531744 | Msa0086790:CDS |
| TGCAGGATATTGTTCAATCC+AGG | 0.466123 | 1_2:+67531877 | Msa0086790:intron |
| GTCTCAACACTTTGAAGTGG+TGG | 0.466490 | 1_2:-67534598 | None:intergenic |
| TGTAGGACTCTAAGATAAGT+AGG | 0.466846 | 1_2:+67530319 | Msa0086790:intron |
| AAAATGGCATAGAAGTTAAA+GGG | 0.467666 | 1_2:+67533879 | Msa0086790:CDS |
| GCCTCTGTTCTCTCCTGCAA+AGG | 0.470371 | 1_2:+67530053 | Msa0086790:CDS |
| TATAGGAAAACTAGAAGGCC+TGG | 0.471838 | 1_2:-67531895 | None:intergenic |
| AGCAATATTTCTTACCAAAA+GGG | 0.473884 | 1_2:-67531772 | None:intergenic |
| ACCATTCCTTTCCTTTCCTA+GGG | 0.476231 | 1_2:+67529685 | Msa0086790:CDS |
| AAATTTGATCATCATTTCCA+TGG | 0.478816 | 1_2:-67534636 | None:intergenic |
| GTCATTTGAGAATGTGATGT+TGG | 0.480349 | 1_2:+67530687 | Msa0086790:CDS |
| GGCAAACCAGAATATTGGTC+AGG | 0.480574 | 1_2:+67534483 | Msa0086790:CDS |
| CAATGGCTGCCAGACGGCTA+AGG | 0.481003 | 1_2:+67534158 | Msa0086790:CDS |
| CTACACCTTCATTGGTGTCT+GGG | 0.486993 | 1_2:-67533988 | None:intergenic |
| TCGCAACGTACTATTGTCAA+TGG | 0.487852 | 1_2:+67534190 | Msa0086790:CDS |
| GCTTAGGCTTAAAGAACAAA+AGG | 0.490968 | 1_2:+67533841 | Msa0086790:CDS |
| CTTTCCTTTCCTAGGGCTGG+TGG | 0.493616 | 1_2:+67529692 | Msa0086790:CDS |
| AACTTTACCACTATCACGGC+TGG | 0.497031 | 1_2:-67534278 | None:intergenic |
| CGGCGTAGGGATTGAGAAGA+AGG | 0.497610 | 1_2:-67528872 | None:intergenic |
| CTACAATAGGTGCAGCGTGC+AGG | 0.498154 | 1_2:+67528819 | Msa0086790:five_prime_UTR |
| AGGAGGAAGCTGCTCAAAGA+AGG | 0.509595 | 1_2:+67533200 | Msa0086790:CDS |
| CATTTCCCAGACACCAATGA+AGG | 0.512701 | 1_2:+67533983 | Msa0086790:CDS |
| AGAGAGAGGAAGAGATCGAT+TGG | 0.520912 | 1_2:-67528925 | None:intergenic |
| AATGGAACCAGCCGTGATAG+TGG | 0.523832 | 1_2:+67534271 | Msa0086790:CDS |
| ATGGGAACAAATCTCACGTC+GGG | 0.524173 | 1_2:+67534713 | Msa0086790:CDS |
| CATGGAGGCAACAATCAGTC+AGG | 0.524598 | 1_2:+67534532 | Msa0086790:CDS |
| AGAAACTTGTGCAAGCAACT+AGG | 0.527314 | 1_2:-67532046 | None:intergenic |
| AAGTCACATGCAGCCAAAGA+TGG | 0.527424 | 1_2:-67533941 | None:intergenic |
| TGAAGCAAGTGTTGGTTGGT+GGG | 0.529070 | 1_2:+67534932 | Msa0086790:CDS |
| GATCCGCAAAGAATTGAAAT+CGG | 0.529832 | 1_2:-67528895 | None:intergenic |
| ACTAGTCAATTGCAGCCAAT+CGG | 0.531123 | 1_2:+67534414 | Msa0086790:CDS |
| GAAGATATAGGAAAACTAGA+AGG | 0.531281 | 1_2:-67531900 | None:intergenic |
| TGACAAGATTATTCTCCGAT+TGG | 0.533109 | 1_2:-67534429 | None:intergenic |
| GTTCACCCATTAATTACAGA+AGG | 0.542398 | 1_2:+67530121 | Msa0086790:CDS |
| CTGATTGTTGCCTCCATGAA+AGG | 0.543496 | 1_2:-67534527 | None:intergenic |
| TTGTAGTAGTCGTAGTAGTA+GGG | 0.553616 | 1_2:-67528802 | None:intergenic |
| TGTGTAGCTCTCTGTAGAAG+AGG | 0.554214 | 1_2:+67530651 | Msa0086790:intron |
| TTCATTTGGCAGAAATTCCA+GGG | 0.554733 | 1_2:+67530028 | Msa0086790:intron |
| ACAGAAGTTGACGTAGTCCA+TGG | 0.555082 | 1_2:+67534619 | Msa0086790:CDS |
| GTTGCAAAACTTACTGCCTC+AGG | 0.556095 | 1_2:+67529587 | Msa0086790:CDS |
| ATGCCAGAAGCTGCTGGTGG+AGG | 0.559726 | 1_2:+67533177 | Msa0086790:CDS |
| TGAGATGACGTACGAGAGAG+AGG | 0.563127 | 1_2:-67528939 | None:intergenic |
| GCTCTCTGTAGAAGAGGCAA+AGG | 0.564425 | 1_2:+67530657 | Msa0086790:intron |
| GTAGGACTCTAAGATAAGTA+GGG | 0.565142 | 1_2:+67530320 | Msa0086790:intron |
| TTACAATCAGATGCACAGTC+AGG | 0.570742 | 1_2:+67534070 | Msa0086790:CDS |
| GGAGAGAACAGAGGCCACCC+TGG | 0.571933 | 1_2:-67530045 | None:intergenic |
| AATAATTGAATCCACTGTGC+TGG | 0.572644 | 1_2:-67529722 | None:intergenic |
| CATAAAATTGGGAGTACCTG+AGG | 0.573819 | 1_2:-67529603 | None:intergenic |
| GATCAATTTGAAGCAAGTGT+TGG | 0.576252 | 1_2:+67534924 | Msa0086790:CDS |
| GGCATAAACGTGTACACCAT+CGG | 0.580800 | 1_2:+67530142 | Msa0086790:CDS |
| GGCCTGTCACCACCAGCCCT+AGG | 0.584313 | 1_2:-67529701 | None:intergenic |
| ATGCTTTCCAGGAGGTTCCA+GGG | 0.584824 | 1_2:+67531664 | Msa0086790:intron |
| TCTGTCTCAACACTTTGAAG+TGG | 0.585570 | 1_2:-67534601 | None:intergenic |
| TTGAAGCAAGTGTTGGTTGG+TGG | 0.587504 | 1_2:+67534931 | Msa0086790:CDS |
| AATTTGAAGCAAGTGTTGGT+TGG | 0.592334 | 1_2:+67534928 | Msa0086790:CDS |
| AGGTTGTGTGATATAGATGG+AGG | 0.593933 | 1_2:+67534679 | Msa0086790:CDS |
| ATTGAAATGCCAGAAGCTGC+TGG | 0.594331 | 1_2:+67533171 | Msa0086790:CDS |
| CACCAATGAAGGTGTAGATG+AGG | 0.600811 | 1_2:+67533994 | Msa0086790:CDS |
| TCAACTCTTCGAACACAACA+AGG | 0.602015 | 1_2:+67531708 | Msa0086790:CDS |
| ATAGTGGTAAAGTTTGGAGC+CGG | 0.606698 | 1_2:+67534287 | Msa0086790:CDS |
| GGCTTAAAGAACAAAAGGCG+AGG | 0.606871 | 1_2:+67533846 | Msa0086790:CDS |
| TCCAAACTTTACCACTATCA+CGG | 0.608024 | 1_2:-67534282 | None:intergenic |
| ATTTATTTACAGACAAGCTG+AGG | 0.611059 | 1_2:+67533793 | Msa0086790:intron |
| GCCCTAGGAAAGGAAAGGAA+TGG | 0.614272 | 1_2:-67529686 | None:intergenic |
| TAAACCAGAAATTGATACAG+TGG | 0.614991 | 1_2:+67534315 | Msa0086790:CDS |
| GTCACCACCAGCCCTAGGAA+AGG | 0.616240 | 1_2:-67529696 | None:intergenic |
| GGATACATTGATAAGACAAG+CGG | 0.623294 | 1_2:+67529652 | Msa0086790:CDS |
| CACCAGCCCTAGGAAAGGAA+AGG | 0.626418 | 1_2:-67529691 | None:intergenic |
| ATTTGAGAATGTGATGTTGG+AGG | 0.627772 | 1_2:+67530690 | Msa0086790:CDS |
| ACATAATCCTCGACGCACAA+TGG | 0.630261 | 1_2:+67534141 | Msa0086790:CDS |
| CATGCTTTAGAACAGCAACA+AGG | 0.632194 | 1_2:+67529746 | Msa0086790:CDS |
| AAAGGGTGCATCAGAAACAC+AGG | 0.634148 | 1_2:+67533896 | Msa0086790:CDS |
| AATAGGTGCAGCGTGCAGGA+AGG | 0.639418 | 1_2:+67528823 | Msa0086790:five_prime_UTR |
| GCTTAAAGAACAAAAGGCGA+GGG | 0.639528 | 1_2:+67533847 | Msa0086790:CDS |
| ACATTGATAAGACAAGCGGT+TGG | 0.640269 | 1_2:+67529656 | Msa0086790:CDS |
| CTGGCAGCCATTGTGCGTCG+AGG | 0.644078 | 1_2:-67534148 | None:intergenic |
| CTTTCACATAGGTAAAGGCG+TGG | 0.647669 | 1_2:+67533125 | Msa0086790:intron |
| GACGCACAATGGCTGCCAGA+CGG | 0.648130 | 1_2:+67534152 | Msa0086790:CDS |
| GGGCCAAAAGCAGATTCAGA+AGG | 0.649820 | 1_2:+67534733 | Msa0086790:CDS |
| GCTTGTACAATTGAAGACCC+TGG | 0.657586 | 1_2:-67531681 | None:intergenic |
| GTGCATCAGAAACACAGGAG+AGG | 0.672991 | 1_2:+67533901 | Msa0086790:CDS |
| GTGGTGACAGGCCAGCACAG+TGG | 0.685473 | 1_2:+67529711 | Msa0086790:CDS |
| CCGCAAAGAATTGAAATCGG+CGG | 0.685741 | 1_2:-67528892 | None:intergenic |
| TATGGGAACAAATCTCACGT+CGG | 0.688700 | 1_2:+67534712 | Msa0086790:CDS |
| GAAATGCCAGAAGCTGCTGG+TGG | 0.694123 | 1_2:+67533174 | Msa0086790:CDS |
| AGGAGAGGAGATATCGCGAG+AGG | 0.698237 | 1_2:+67533916 | Msa0086790:CDS |
| AAACCTGACTCCTTTCATGG+AGG | 0.702374 | 1_2:+67534517 | Msa0086790:CDS |
| ACCTTTGCAGGAGAGAACAG+AGG | 0.703630 | 1_2:-67530054 | None:intergenic |
| ATTTGGCAGAAATTCCAGGG+TGG | 0.736950 | 1_2:+67530031 | Msa0086790:intron |
| CCAGCCCTGAGATAATACTG+TGG | 0.746348 | 1_2:-67531744 | None:intergenic |
| TTGTGACACTGATCAGAACG+TGG | 0.764373 | 1_2:+67534036 | Msa0086790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACATATAAAAATAGAA+AGG | - | chr1_2:67529095-67529114 | None:intergenic | 10.0% |
| !!! | AATGATTTTAGTTTTAATTA+AGG | - | chr1_2:67529863-67529882 | None:intergenic | 10.0% |
| !!! | ATTATATCAGAAAAAATTTT+GGG | - | chr1_2:67530002-67530021 | None:intergenic | 10.0% |
| !!! | TATTATATCAGAAAAAATTT+TGG | - | chr1_2:67530003-67530022 | None:intergenic | 10.0% |
| !! | CAATATATTTAGATTAATTA+GGG | - | chr1_2:67531620-67531639 | None:intergenic | 10.0% |
| !! | ACAATATATTTAGATTAATT+AGG | - | chr1_2:67531621-67531640 | None:intergenic | 10.0% |
| !!! | ATTGCAATAATAAGAAATTT+TGG | + | chr1_2:67529770-67529789 | Msa0086790:intron | 15.0% |
| !!! | ATTTTAGTTTTAATTAAGGA+AGG | - | chr1_2:67529859-67529878 | None:intergenic | 15.0% |
| !! | GATATAATATTTGATTCATT+TGG | + | chr1_2:67530014-67530033 | Msa0086790:intron | 15.0% |
| !!! | TTTTTTTGCATATATTCTTT+AGG | + | chr1_2:67531824-67531843 | Msa0086790:intron | 15.0% |
| !! | AATAATATAGAATAGAAATC+TGG | - | chr1_2:67532590-67532609 | None:intergenic | 15.0% |
| !! | AGATTTCTATTCTATATTAT+TGG | + | chr1_2:67532589-67532608 | Msa0086790:intron | 15.0% |
| !! | TTTAAATAATTGTCATGAAA+AGG | + | chr1_2:67532755-67532774 | Msa0086790:intron | 15.0% |
| !! | GAATAATATTTCAATATCTA+AGG | + | chr1_2:67532883-67532902 | Msa0086790:intron | 15.0% |
| !! | AAATATTTCAAGAGTTAATT+GGG | + | chr1_2:67533294-67533313 | Msa0086790:intron | 15.0% |
| !!! | ACTTTCTTGTAATTTTTAAT+AGG | + | chr1_2:67533470-67533489 | Msa0086790:intron | 15.0% |
| !!! | AATTTTTAATAGGTGAAATA+AGG | + | chr1_2:67533480-67533499 | Msa0086790:intron | 15.0% |
| !!! | ATTTTTAATAGGTGAAATAA+GGG | + | chr1_2:67533481-67533500 | Msa0086790:intron | 15.0% |
| !! | NNNNAAGTACAAGTATTATT+AGG | + | chr1_2:67534891-67534910 | Msa0086790:intron | 15.0% |
| !! | TATAAAAATTATGGTTCGTT+TGG | + | chr1_2:67529312-67529331 | Msa0086790:intron | 20.0% |
| !! | TATTTGAATTGAACATTTCT+CGG | + | chr1_2:67529804-67529823 | Msa0086790:intron | 20.0% |
| !!! | TACAATATATAAGAAGCATT+GGG | - | chr1_2:67530303-67530322 | None:intergenic | 20.0% |
| !!! | CAATTTTACATATATGAAGA+AGG | + | chr1_2:67530387-67530406 | Msa0086790:intron | 20.0% |
| !!! | TAGTAAAAGTATCATATCTT+TGG | - | chr1_2:67530880-67530899 | None:intergenic | 20.0% |
| !! | TAAAGTACAAAATGATACTT+TGG | + | chr1_2:67530944-67530963 | Msa0086790:intron | 20.0% |
| !!! | TTAATAATTAAGGGTACTAT+TGG | + | chr1_2:67530981-67531000 | Msa0086790:intron | 20.0% |
| !! | TTTATTAGCATAAATGAAAG+TGG | + | chr1_2:67531106-67531125 | Msa0086790:intron | 20.0% |
| !! | TTATTAGCATAAATGAAAGT+GGG | + | chr1_2:67531107-67531126 | Msa0086790:intron | 20.0% |
| !! | AAATCATATTCACATTGAAA+AGG | - | chr1_2:67531322-67531341 | None:intergenic | 20.0% |
| !!! | AATTGAAAGTTTTTCAAAGA+CGG | + | chr1_2:67531512-67531531 | Msa0086790:intron | 20.0% |
| !! | CAAAAAAAAACAAGAATGAA+TGG | - | chr1_2:67531812-67531831 | None:intergenic | 20.0% |
| !! | TATATATCTACATTATTTGC+AGG | + | chr1_2:67531860-67531879 | Msa0086790:intron | 20.0% |
| !!! | ACATAAAAATGTATTTTCAC+TGG | - | chr1_2:67531955-67531974 | None:intergenic | 20.0% |
| !!! | AGTGAAAATACATTTTTATG+TGG | + | chr1_2:67531954-67531973 | Msa0086790:CDS | 20.0% |
| !!! | GTGTATAATTTGTTATTCTA+TGG | + | chr1_2:67532312-67532331 | Msa0086790:intron | 20.0% |
| !!! | CTTTATTTTTTTTCAAACCT+CGG | + | chr1_2:67532421-67532440 | Msa0086790:intron | 20.0% |
| !! | ATTATTGGCATAATAGTATT+AGG | + | chr1_2:67532604-67532623 | Msa0086790:intron | 20.0% |
| !! | CAAATATTTCAAGAGTTAAT+TGG | + | chr1_2:67533293-67533312 | Msa0086790:intron | 20.0% |
| !! | ATTGTTAACAAATGGAAAAA+TGG | - | chr1_2:67533360-67533379 | None:intergenic | 20.0% |
| !! | ATATAATAACAAAACCTGTA+TGG | + | chr1_2:67533509-67533528 | Msa0086790:intron | 20.0% |
| !!! | AAATAAGTTAACAAAGTACT+TGG | - | chr1_2:67533581-67533600 | None:intergenic | 20.0% |
| !! | CTTGTCTGTAAATAAATAAA+GGG | - | chr1_2:67533790-67533809 | None:intergenic | 20.0% |
| !!! | AAATGATGATCAAATTTTGT+CGG | + | chr1_2:67534642-67534661 | Msa0086790:CDS | 20.0% |
| ! | AGAAATAAGCTTAAACATGT+AGG | + | chr1_2:67529067-67529086 | Msa0086790:intron | 25.0% |
| !! | GAATCTAAGATTAATCGATA+AGG | + | chr1_2:67529159-67529178 | Msa0086790:intron | 25.0% |
| ! | ATGAACAAAAAAGAAATGCA+AGG | - | chr1_2:67529470-67529489 | None:intergenic | 25.0% |
| !! | TACTATTTTCTATTTTGTGC+AGG | + | chr1_2:67529517-67529536 | Msa0086790:intron | 25.0% |
| !! | ACTATTTTCTATTTTGTGCA+GGG | + | chr1_2:67529518-67529537 | Msa0086790:intron | 25.0% |
| ! | TAAAATTTCTTGGTTAGGTT+TGG | + | chr1_2:67529549-67529568 | Msa0086790:five_prime_UTR | 25.0% |
| ! | AAAATTTCTTGGTTAGGTTT+GGG | + | chr1_2:67529550-67529569 | Msa0086790:five_prime_UTR | 25.0% |
| ! | ATTTGAATTGAACATTTCTC+GGG | + | chr1_2:67529805-67529824 | Msa0086790:intron | 25.0% |
| !!! | ATCAGAAAAAATTTTGGGTT+TGG | - | chr1_2:67529997-67530016 | None:intergenic | 25.0% |
| ! | TTATGCCTTCTGTAATTAAT+GGG | - | chr1_2:67530129-67530148 | None:intergenic | 25.0% |
| ! | TTTATGCCTTCTGTAATTAA+TGG | - | chr1_2:67530130-67530149 | None:intergenic | 25.0% |
| !! | CTTTATATCTCATAAGTTGA+AGG | + | chr1_2:67530188-67530207 | Msa0086790:intron | 25.0% |
| ! | AAGTAAACATGAAAATACAC+TGG | - | chr1_2:67530255-67530274 | None:intergenic | 25.0% |
| !! | CTACAATATATAAGAAGCAT+TGG | - | chr1_2:67530304-67530323 | None:intergenic | 25.0% |
| ! | CAATGCTTCTTATATATTGT+AGG | + | chr1_2:67530302-67530321 | Msa0086790:intron | 25.0% |
| ! | TGCGTGGATATTAATAATTA+AGG | + | chr1_2:67530971-67530990 | Msa0086790:intron | 25.0% |
| ! | GCGTGGATATTAATAATTAA+GGG | + | chr1_2:67530972-67530991 | Msa0086790:intron | 25.0% |
| ! | TATTAGCATAAATGAAAGTG+GGG | + | chr1_2:67531108-67531127 | Msa0086790:intron | 25.0% |
| ! | AAAAGTGAGAATGTGAAAAA+GGG | - | chr1_2:67531176-67531195 | None:intergenic | 25.0% |
| ! | TAAAAGTGAGAATGTGAAAA+AGG | - | chr1_2:67531177-67531196 | None:intergenic | 25.0% |
| ! | TTTAATCTTTCAACAAACAG+AGG | - | chr1_2:67531295-67531314 | None:intergenic | 25.0% |
| !! | TCTGTTTGTTGAAAGATTAA+AGG | + | chr1_2:67531294-67531313 | Msa0086790:intron | 25.0% |
| ! | TATATTATTTCCAGACAAGA+AGG | - | chr1_2:67531362-67531381 | None:intergenic | 25.0% |
| !!! | ATTGAAAGTTTTTCAAAGAC+GGG | + | chr1_2:67531513-67531532 | Msa0086790:intron | 25.0% |
| ! | AAAACAATAAGAGCTGAAAA+GGG | - | chr1_2:67531581-67531600 | None:intergenic | 25.0% |
| ! | AGCAATATTTCTTACCAAAA+GGG | - | chr1_2:67531775-67531794 | None:intergenic | 25.0% |
| !! | GAGAATATTGAACAACTTTT+GGG | - | chr1_2:67531925-67531944 | None:intergenic | 25.0% |
| ! | ATATTGTTAACCAACAGTAT+CGG | + | chr1_2:67532289-67532308 | Msa0086790:intron | 25.0% |
| !!! | TGACACTGATTTTATTGTTT+GGG | + | chr1_2:67532376-67532395 | Msa0086790:intron | 25.0% |
| ! | TATTGTTAGCTATGTACAAA+GGG | + | chr1_2:67532556-67532575 | Msa0086790:intron | 25.0% |
| ! | AGACAAACATTGTTAACAAA+TGG | - | chr1_2:67533368-67533387 | None:intergenic | 25.0% |
| ! | TTTGTTAACAATGTTTGTCT+TGG | + | chr1_2:67533368-67533387 | Msa0086790:intron | 25.0% |
| ! | TTGTTAACAATGTTTGTCTT+GGG | + | chr1_2:67533369-67533388 | Msa0086790:intron | 25.0% |
| ! | GCTTGTCTGTAAATAAATAA+AGG | - | chr1_2:67533791-67533810 | None:intergenic | 25.0% |
| ! | AAAATGGCATAGAAGTTAAA+GGG | + | chr1_2:67533879-67533898 | Msa0086790:CDS | 25.0% |
| ! | GTTATGATTGTGACATTAAT+CGG | + | chr1_2:67534092-67534111 | Msa0086790:CDS | 25.0% |
| ! | AAATTTGATCATCATTTCCA+TGG | - | chr1_2:67534639-67534658 | None:intergenic | 25.0% |
| ! | AGTACAAGTATTATTAGGTT+AGG | + | chr1_2:67534896-67534915 | Msa0086790:intron | 25.0% |
| ATCTCTCAACATATCAAAGT+TGG | - | chr1_2:67529285-67529304 | None:intergenic | 30.0% | |
| ! | CTATTTTCTATTTTGTGCAG+GGG | + | chr1_2:67529519-67529538 | Msa0086790:intron | 30.0% |
| TCCTGTAAAATTTCTTGGTT+AGG | + | chr1_2:67529544-67529563 | Msa0086790:five_prime_UTR | 30.0% | |
| ! | ACCTAACCAAGAAATTTTAC+AGG | - | chr1_2:67529548-67529567 | None:intergenic | 30.0% |
| ! | TACTCCCAATTTTATGAAAC+CGG | + | chr1_2:67529610-67529629 | Msa0086790:CDS | 30.0% |
| TCTTCCGGTTTCATAAAATT+GGG | - | chr1_2:67529617-67529636 | None:intergenic | 30.0% | |
| ! | AATTTTATGAAACCGGAAGA+CGG | + | chr1_2:67529617-67529636 | Msa0086790:CDS | 30.0% |
| GAATCAAATGTACTAGTAAC+GGG | - | chr1_2:67529975-67529994 | None:intergenic | 30.0% | |
| GGAATCAAATGTACTAGTAA+CGG | - | chr1_2:67529976-67529995 | None:intergenic | 30.0% | |
| ! | AAGATAAGTAGGGATCTTTT+AGG | + | chr1_2:67530330-67530349 | Msa0086790:CDS | 30.0% |
| ! | AGATAAGTAGGGATCTTTTA+GGG | + | chr1_2:67530331-67530350 | Msa0086790:CDS | 30.0% |
| TATGAAGAAGGCTAATTCTA+TGG | + | chr1_2:67530399-67530418 | Msa0086790:intron | 30.0% | |
| GATAGGACTTATTGATCAAA+TGG | - | chr1_2:67530470-67530489 | None:intergenic | 30.0% | |
| AAATAAGATGCGTTCTTCAT+AGG | - | chr1_2:67530593-67530612 | None:intergenic | 30.0% | |
| ATTAGCATAAATGAAAGTGG+GGG | + | chr1_2:67531109-67531128 | Msa0086790:intron | 30.0% | |
| GTTCTTTCTAATCGTCATAT+TGG | + | chr1_2:67531256-67531275 | Msa0086790:intron | 30.0% | |
| AAACAATAAGAGCTGAAAAG+GGG | - | chr1_2:67531580-67531599 | None:intergenic | 30.0% | |
| GAAAACAATAAGAGCTGAAA+AGG | - | chr1_2:67531582-67531601 | None:intergenic | 30.0% | |
| ! | TTTTCCACAGTATTATCTCA+GGG | + | chr1_2:67531740-67531759 | Msa0086790:CDS | 30.0% |
| CAGCAATATTTCTTACCAAA+AGG | - | chr1_2:67531776-67531795 | None:intergenic | 30.0% | |
| GAAGATATAGGAAAACTAGA+AGG | - | chr1_2:67531903-67531922 | None:intergenic | 30.0% | |
| !! | AACAACTTTTGGGAAGATAT+AGG | - | chr1_2:67531915-67531934 | None:intergenic | 30.0% |
| ! | CGAGAATATTGAACAACTTT+TGG | - | chr1_2:67531926-67531945 | None:intergenic | 30.0% |
| !! | ATGCAAAGACATGTTTTTGA+TGG | + | chr1_2:67531990-67532009 | Msa0086790:CDS | 30.0% |
| TTGTTCAATACTTGATGTTG+AGG | + | chr1_2:67532182-67532201 | Msa0086790:intron | 30.0% | |
| AAGATTTATCTGCAATTCTC+AGG | - | chr1_2:67532258-67532277 | None:intergenic | 30.0% | |
| TATTGTTAACCAACAGTATC+GGG | + | chr1_2:67532290-67532309 | Msa0086790:intron | 30.0% | |
| !!! | CTGACACTGATTTTATTGTT+TGG | + | chr1_2:67532375-67532394 | Msa0086790:intron | 30.0% |
| ! | ATTTGGTGAAGTCTCTTTAA+TGG | - | chr1_2:67532490-67532509 | None:intergenic | 30.0% |
| CTATTGTTAGCTATGTACAA+AGG | + | chr1_2:67532555-67532574 | Msa0086790:intron | 30.0% | |
| ! | ATTCATTTTCCCTTTCTACT+CGG | - | chr1_2:67532860-67532879 | None:intergenic | 30.0% |
| ! | CTGATGCATATTCTCTTTTT+AGG | + | chr1_2:67532928-67532947 | Msa0086790:intron | 30.0% |
| TAATGTTTGAGTATGAACAG+AGG | - | chr1_2:67533059-67533078 | None:intergenic | 30.0% | |
| ATGTGAATTTCCTTTCACAT+AGG | + | chr1_2:67533114-67533133 | Msa0086790:intron | 30.0% | |
| ATTTCCTTTCACATAGGTAA+AGG | + | chr1_2:67533120-67533139 | Msa0086790:intron | 30.0% | |
| !! | TGAGTTTCATTTCCACTTTT+AGG | + | chr1_2:67533257-67533276 | Msa0086790:intron | 30.0% |
| !! | TCAAAAAGTGCTAAAGATGT+TGG | + | chr1_2:67533697-67533716 | Msa0086790:intron | 30.0% |
| TAGTTGTGAACTAGTCATTA+TGG | + | chr1_2:67533741-67533760 | Msa0086790:intron | 30.0% | |
| ATTTATTTACAGACAAGCTG+AGG | + | chr1_2:67533793-67533812 | Msa0086790:intron | 30.0% | |
| GAAAATGGCATAGAAGTTAA+AGG | + | chr1_2:67533878-67533897 | Msa0086790:CDS | 30.0% | |
| !! | ACTTAGACTTTTGAGAGTTT+TGG | - | chr1_2:67534228-67534247 | None:intergenic | 30.0% |
| GTCATTCCAAAATATGGAAA+TGG | + | chr1_2:67534253-67534272 | Msa0086790:CDS | 30.0% | |
| !! | ACTGTATCAATTTCTGGTTT+AGG | - | chr1_2:67534316-67534335 | None:intergenic | 30.0% |
| TAAACCAGAAATTGATACAG+TGG | + | chr1_2:67534315-67534334 | Msa0086790:CDS | 30.0% | |
| AAAACCACTGTATCAATTTC+TGG | - | chr1_2:67534322-67534341 | None:intergenic | 30.0% | |
| AATTTGGCAAACCAGAATAT+TGG | + | chr1_2:67534478-67534497 | Msa0086790:CDS | 30.0% | |
| TTAAGGTTGTGTGATATAGA+TGG | + | chr1_2:67534676-67534695 | Msa0086790:CDS | 30.0% | |
| TTGTAGTAGTCGTAGTAGTA+GGG | - | chr1_2:67528805-67528824 | None:intergenic | 35.0% | |
| ATTGTAGTAGTCGTAGTAGT+AGG | - | chr1_2:67528806-67528825 | None:intergenic | 35.0% | |
| ACTACTACGACTACTACAAT+AGG | + | chr1_2:67528806-67528825 | Msa0086790:five_prime_UTR | 35.0% | |
| AGGAAAAACGATCGAGAAAA+TGG | - | chr1_2:67528855-67528874 | None:intergenic | 35.0% | |
| GATCCGCAAAGAATTGAAAT+CGG | - | chr1_2:67528898-67528917 | None:intergenic | 35.0% | |
| TCTACAACGATTGTTGAGTT+TGG | + | chr1_2:67529239-67529258 | Msa0086790:intron | 35.0% | |
| TGCAAAATGCTGCTAATTAC+CGG | - | chr1_2:67529345-67529364 | None:intergenic | 35.0% | |
| ATGTAGTGACCTATGTTGTA+AGG | + | chr1_2:67529372-67529391 | Msa0086790:intron | 35.0% | |
| GTACCACTATTTAACAACAC+TGG | + | chr1_2:67529443-67529462 | Msa0086790:intron | 35.0% | |
| GGGAATCCTGTAAAATTTCT+TGG | + | chr1_2:67529539-67529558 | Msa0086790:five_prime_UTR | 35.0% | |
| GTCTTCCGGTTTCATAAAAT+TGG | - | chr1_2:67529618-67529637 | None:intergenic | 35.0% | |
| AAAGAATCATTTCCGTCTTC+CGG | - | chr1_2:67529632-67529651 | None:intergenic | 35.0% | |
| GGATACATTGATAAGACAAG+CGG | + | chr1_2:67529652-67529671 | Msa0086790:CDS | 35.0% | |
| AATAATTGAATCCACTGTGC+TGG | - | chr1_2:67529725-67529744 | None:intergenic | 35.0% | |
| ATTGAACATTTCTCGGGTAT+TGG | + | chr1_2:67529811-67529830 | Msa0086790:intron | 35.0% | |
| ATTAAGGAAGGCTAATCACA+TGG | - | chr1_2:67529847-67529866 | None:intergenic | 35.0% | |
| TCAGTTACAAATGCAACGAT+AGG | - | chr1_2:67529896-67529915 | None:intergenic | 35.0% | |
| ATTCATTTGGCAGAAATTCC+AGG | + | chr1_2:67530027-67530046 | Msa0086790:intron | 35.0% | |
| TTCATTTGGCAGAAATTCCA+GGG | + | chr1_2:67530028-67530047 | Msa0086790:intron | 35.0% | |
| TTTAGTAGTTGAACCTTTGC+AGG | - | chr1_2:67530069-67530088 | None:intergenic | 35.0% | |
| TGAACAAAACTCTCTGTCTT+TGG | - | chr1_2:67530106-67530125 | None:intergenic | 35.0% | |
| GTTCACCCATTAATTACAGA+AGG | + | chr1_2:67530121-67530140 | Msa0086790:CDS | 35.0% | |
| !!! | TATCAAGCTTTTTCAACCGA+TGG | - | chr1_2:67530161-67530180 | None:intergenic | 35.0% |
| TCGGTTGAAAAAGCTTGATA+AGG | + | chr1_2:67530161-67530180 | Msa0086790:CDS | 35.0% | |
| !! | TGTAGGACTCTAAGATAAGT+AGG | + | chr1_2:67530319-67530338 | Msa0086790:intron | 35.0% |
| !! | GTAGGACTCTAAGATAAGTA+GGG | + | chr1_2:67530320-67530339 | Msa0086790:intron | 35.0% |
| ! | GATAAGTAGGGATCTTTTAG+GGG | + | chr1_2:67530332-67530351 | Msa0086790:CDS | 35.0% |
| AGGACTTATTGATCAAATGG+TGG | - | chr1_2:67530467-67530486 | None:intergenic | 35.0% | |
| GCATCAAAGTGAGATATGAT+AGG | - | chr1_2:67530487-67530506 | None:intergenic | 35.0% | |
| CATATCTCACTTTGATGCAA+TGG | + | chr1_2:67530489-67530508 | Msa0086790:intron | 35.0% | |
| GTCATTTGAGAATGTGATGT+TGG | + | chr1_2:67530687-67530706 | Msa0086790:CDS | 35.0% | |
| ATTTGAGAATGTGATGTTGG+AGG | + | chr1_2:67530690-67530709 | Msa0086790:CDS | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr1_2:67531072-67531091 | None:intergenic | 35.0% |
| TTCCTTAATCTGTGTGCAAT+TGG | - | chr1_2:67530843-67530862 | None:intergenic | 35.0% | |
| AAAATAGCCTCGCTAGTTAT+TGG | + | chr1_2:67530899-67530918 | Msa0086790:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1_2:67531072-67531091 | Msa0086790:intron | 35.0% |
| TTAGCATAAATGAAAGTGGG+GGG | + | chr1_2:67531110-67531129 | Msa0086790:intron | 35.0% | |
| AGACTACTATGTCTTTGTGT+GGG | - | chr1_2:67531479-67531498 | None:intergenic | 35.0% | |
| AAGACTACTATGTCTTTGTG+TGG | - | chr1_2:67531480-67531499 | None:intergenic | 35.0% | |
| ! | CTTTTCCACAGTATTATCTC+AGG | + | chr1_2:67531739-67531758 | Msa0086790:CDS | 35.0% |
| !! | AAGACATGTTTTTGATGGAG+AGG | + | chr1_2:67531995-67532014 | Msa0086790:CDS | 35.0% |
| TTTCTTGCTAGAGCAGAAAT+TGG | + | chr1_2:67532064-67532083 | Msa0086790:CDS | 35.0% | |
| !!! | AGGGAAAAGTTTTTGAAGCT+AGG | - | chr1_2:67532101-67532120 | None:intergenic | 35.0% |
| ! | AAGAAGATTGATTCATCACC+AGG | + | chr1_2:67532227-67532246 | Msa0086790:intron | 35.0% |
| AATTATACACCCGATACTGT+TGG | - | chr1_2:67532302-67532321 | None:intergenic | 35.0% | |
| TGTTTGGGTATCTGTAAGTT+TGG | + | chr1_2:67532391-67532410 | Msa0086790:intron | 35.0% | |
| TTCATTATCACTCTTCCCTT+TGG | + | chr1_2:67532633-67532652 | Msa0086790:intron | 35.0% | |
| AAGAAAAGAACCGAGTAGAA+AGG | + | chr1_2:67532847-67532866 | Msa0086790:intron | 35.0% | |
| AGAAAAGAACCGAGTAGAAA+GGG | + | chr1_2:67532848-67532867 | Msa0086790:intron | 35.0% | |
| GTAGAAAGGGAAAATGAATC+TGG | + | chr1_2:67532861-67532880 | Msa0086790:intron | 35.0% | |
| ATGAAACTCATGAATCACAC+AGG | - | chr1_2:67533247-67533266 | None:intergenic | 35.0% | |
| ! | GTGACTGGTAATGTAAAAGA+GGG | - | chr1_2:67533411-67533430 | None:intergenic | 35.0% |
| CCTAAATGTCCATTAAGTCA+AGG | - | chr1_2:67533433-67533452 | None:intergenic | 35.0% | |
| ! | CCTTGACTTAATGGACATTT+AGG | + | chr1_2:67533430-67533449 | Msa0086790:intron | 35.0% |
| GAAAACGCTTGAAAAAGCTT+AGG | + | chr1_2:67533825-67533844 | Msa0086790:CDS | 35.0% | |
| GCTTAGGCTTAAAGAACAAA+AGG | + | chr1_2:67533841-67533860 | Msa0086790:CDS | 35.0% | |
| !!! | CTTCTATGCCATTTTCAAGT+TGG | - | chr1_2:67533874-67533893 | None:intergenic | 35.0% |
| GCATCTGATTGTAATGTTTG+TGG | - | chr1_2:67534064-67534083 | None:intergenic | 35.0% | |
| AACTCTCAAAAGTCTAAGTC+TGG | + | chr1_2:67534229-67534248 | Msa0086790:CDS | 35.0% | |
| ! | TCTGGAGTCATTCCAAAATA+TGG | + | chr1_2:67534247-67534266 | Msa0086790:CDS | 35.0% |
| ! | CTGGTTCCATTTCCATATTT+TGG | - | chr1_2:67534262-67534281 | None:intergenic | 35.0% |
| TCCAAACTTTACCACTATCA+CGG | - | chr1_2:67534285-67534304 | None:intergenic | 35.0% | |
| !! | CAATTTCTGGTTTAGGTTTC+CGG | - | chr1_2:67534309-67534328 | None:intergenic | 35.0% |
| !! | TCTGGTTCTTTGTGCAATTT+GGG | - | chr1_2:67534349-67534368 | None:intergenic | 35.0% |
| !! | ATCTGGTTCTTTGTGCAATT+TGG | - | chr1_2:67534350-67534369 | None:intergenic | 35.0% |
| !! | AAGACTCACGAAGTTTTGAT+TGG | + | chr1_2:67534376-67534395 | Msa0086790:CDS | 35.0% |
| TGACAAGATTATTCTCCGAT+TGG | - | chr1_2:67534432-67534451 | None:intergenic | 35.0% | |
| GAACAACTTCGTAGAGAATT+TGG | + | chr1_2:67534462-67534481 | Msa0086790:CDS | 35.0% | |
| TGAAAGGAGTCAGGTTTAAT+TGG | - | chr1_2:67534514-67534533 | None:intergenic | 35.0% | |
| ATTAAACCTGACTCCTTTCA+TGG | + | chr1_2:67534514-67534533 | Msa0086790:CDS | 35.0% | |
| !!! | GTGGATTTTTAGTTTCATGC+TGG | - | chr1_2:67534582-67534601 | None:intergenic | 35.0% |
| TGTCGGTGCAAAGTAATTTA+AGG | + | chr1_2:67534659-67534678 | Msa0086790:CDS | 35.0% | |
| TGATATAGATGGAGGCAATA+TGG | + | chr1_2:67534687-67534706 | Msa0086790:CDS | 35.0% | |
| GATATAGATGGAGGCAATAT+GGG | + | chr1_2:67534688-67534707 | Msa0086790:CDS | 35.0% | |
| ! | GATCAATTTGAAGCAAGTGT+TGG | + | chr1_2:67534924-67534943 | Msa0086790:CDS | 35.0% |
| !! | AATTTGAAGCAAGTGTTGGT+TGG | + | chr1_2:67534928-67534947 | Msa0086790:CDS | 35.0% |
| ! | TTGAAAGATCTTGCTTGCTG+TGG | + | chr1_2:67529113-67529132 | Msa0086790:intron | 40.0% |
| ! | GGACCAGTGTTGTTAAATAG+TGG | - | chr1_2:67529449-67529468 | None:intergenic | 40.0% |
| !! | CATAAAATTGGGAGTACCTG+AGG | - | chr1_2:67529606-67529625 | None:intergenic | 40.0% |
| GGAAGACGGAAATGATTCTT+TGG | + | chr1_2:67529631-67529650 | Msa0086790:CDS | 40.0% | |
| ACATTGATAAGACAAGCGGT+TGG | + | chr1_2:67529656-67529675 | Msa0086790:CDS | 40.0% | |
| AACCATTCCTTTCCTTTCCT+AGG | + | chr1_2:67529684-67529703 | Msa0086790:CDS | 40.0% | |
| ACCATTCCTTTCCTTTCCTA+GGG | + | chr1_2:67529685-67529704 | Msa0086790:CDS | 40.0% | |
| !! | CATGCTTTAGAACAGCAACA+AGG | + | chr1_2:67529746-67529765 | Msa0086790:CDS | 40.0% |
| !! | AGAAGCATTGGGTCAAATTG+AGG | - | chr1_2:67530292-67530311 | None:intergenic | 40.0% |
| !! | GGATCTTTTAGGGGCATATT+GGG | + | chr1_2:67530341-67530360 | Msa0086790:CDS | 40.0% |
| ! | TTTAGGGGCATATTGGGATA+AGG | + | chr1_2:67530347-67530366 | Msa0086790:CDS | 40.0% |
| GTGGAAAATTAATGTGTGCG+TGG | - | chr1_2:67530448-67530467 | None:intergenic | 40.0% | |
| ATCTCACTTTGATGCAATGG+TGG | + | chr1_2:67530492-67530511 | Msa0086790:intron | 40.0% | |
| TGGTGGAACTTATTGATCCA+AGG | + | chr1_2:67530509-67530528 | Msa0086790:intron | 40.0% | |
| GGTGGAACTTATTGATCCAA+GGG | + | chr1_2:67530510-67530529 | Msa0086790:intron | 40.0% | |
| GGTGAAAACAGACTTGTGAA+TGG | + | chr1_2:67530531-67530550 | Msa0086790:intron | 40.0% | |
| CTATTGTGCAGAAGTGAAGT+AGG | - | chr1_2:67530564-67530583 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1_2:67530813-67530832 | None:intergenic | 40.0% |
| AGCCAATTGCACACAGATTA+AGG | + | chr1_2:67530838-67530857 | Msa0086790:intron | 40.0% | |
| AAATGCACCAATAACTAGCG+AGG | - | chr1_2:67530909-67530928 | None:intergenic | 40.0% | |
| ! | ATGATACTTTGGAAGTTGCG+TGG | + | chr1_2:67530955-67530974 | Msa0086790:intron | 40.0% |
| !!! | AGCGACACTCATTTTGAAAC+GGG | + | chr1_2:67531073-67531092 | Msa0086790:intron | 40.0% |
| TACTATGTCTTTGTGTGGGT+GGG | - | chr1_2:67531475-67531494 | None:intergenic | 40.0% | |
| !!! | AACCTCCTGGAAAGCATTTT+CGG | - | chr1_2:67531661-67531680 | None:intergenic | 40.0% |
| TCAACTCTTCGAACACAACA+AGG | + | chr1_2:67531708-67531727 | Msa0086790:CDS | 40.0% | |
| TGCAGGATATTGTTCAATCC+AGG | + | chr1_2:67531877-67531896 | Msa0086790:intron | 40.0% | |
| TATAGGAAAACTAGAAGGCC+TGG | - | chr1_2:67531898-67531917 | None:intergenic | 40.0% | |
| !!! | GTGCAAGCAACTAGGTTTTT+TGG | - | chr1_2:67532041-67532060 | None:intergenic | 40.0% |
| AGAAACTTGTGCAAGCAACT+AGG | - | chr1_2:67532049-67532068 | None:intergenic | 40.0% | |
| GCTAGAGCAGAAATTGGTAA+TGG | + | chr1_2:67532070-67532089 | Msa0086790:intron | 40.0% | |
| TGCAATTCTCAGGTATATCC+TGG | - | chr1_2:67532248-67532267 | None:intergenic | 40.0% | |
| TCAAACTTCCCCAAACAAGA+GGG | - | chr1_2:67532352-67532371 | None:intergenic | 40.0% | |
| TTCAAACTTCCCCAAACAAG+AGG | - | chr1_2:67532353-67532372 | None:intergenic | 40.0% | |
| ! | TCTTGTTTGGGGAAGTTTGA+AGG | + | chr1_2:67532352-67532371 | Msa0086790:intron | 40.0% |
| GTGAAGTCTCTTTAATGGCT+TGG | - | chr1_2:67532485-67532504 | None:intergenic | 40.0% | |
| AAGAGACTTCACCAAATAGC+AGG | + | chr1_2:67532493-67532512 | Msa0086790:intron | 40.0% | |
| ! | TCTTCCCTTTGGTTTCTTCA+CGG | + | chr1_2:67532644-67532663 | Msa0086790:intron | 40.0% |
| ATTAAATATGGGGGCGGAAA+GGG | - | chr1_2:67532723-67532742 | None:intergenic | 40.0% | |
| AGTCCAGCAAATAGCTACAT+AGG | + | chr1_2:67532970-67532989 | Msa0086790:intron | 40.0% | |
| CATCCTATGTAGCTATTTGC+TGG | - | chr1_2:67532976-67532995 | None:intergenic | 40.0% | |
| CTTCTGGCATTTCAATGCTT+CGG | - | chr1_2:67533167-67533186 | None:intergenic | 40.0% | |
| !!! | ATTTCCACTTTTAGGTTGCG+AGG | + | chr1_2:67533265-67533284 | Msa0086790:intron | 40.0% |
| AATTCCTCGCAACCTAAAAG+TGG | - | chr1_2:67533272-67533291 | None:intergenic | 40.0% | |
| ! | GGTGACTGGTAATGTAAAAG+AGG | - | chr1_2:67533412-67533431 | None:intergenic | 40.0% |
| TACCAGTCACCTTGACTTAA+TGG | + | chr1_2:67533421-67533440 | Msa0086790:intron | 40.0% | |
| TGCGTCATTTCTTACCATAC+AGG | - | chr1_2:67533526-67533545 | None:intergenic | 40.0% | |
| CTAGTTCACAACTATCACGT+GGG | - | chr1_2:67533735-67533754 | None:intergenic | 40.0% | |
| ACTAGTTCACAACTATCACG+TGG | - | chr1_2:67533736-67533755 | None:intergenic | 40.0% | |
| GCTTAAAGAACAAAAGGCGA+GGG | + | chr1_2:67533847-67533866 | Msa0086790:CDS | 40.0% | |
| ATCCTCATCTACACCTTCAT+TGG | - | chr1_2:67533999-67534018 | None:intergenic | 40.0% | |
| TTACAATCAGATGCACAGTC+AGG | + | chr1_2:67534070-67534089 | Msa0086790:CDS | 40.0% | |
| ACAATAGTACGTTGCGACTT+AGG | - | chr1_2:67534187-67534206 | None:intergenic | 40.0% | |
| TCGCAACGTACTATTGTCAA+TGG | + | chr1_2:67534190-67534209 | Msa0086790:CDS | 40.0% | |
| ! | ATAGTGGTAAAGTTTGGAGC+CGG | + | chr1_2:67534287-67534306 | Msa0086790:CDS | 40.0% |
| TCGTGAGTCTTAACTTCATC+TGG | - | chr1_2:67534367-67534386 | None:intergenic | 40.0% | |
| ACTAGTCAATTGCAGCCAAT+CGG | + | chr1_2:67534414-67534433 | Msa0086790:CDS | 40.0% | |
| ATCAGTCAGGAGTTAAGCTT+TGG | + | chr1_2:67534545-67534564 | Msa0086790:CDS | 40.0% | |
| ! | TCTGTCTCAACACTTTGAAG+TGG | - | chr1_2:67534604-67534623 | None:intergenic | 40.0% |
| AGGTTGTGTGATATAGATGG+AGG | + | chr1_2:67534679-67534698 | Msa0086790:CDS | 40.0% | |
| ! | ATGGAGGCAATATGGGTTAT+GGG | + | chr1_2:67534695-67534714 | Msa0086790:CDS | 40.0% |
| TATGGGAACAAATCTCACGT+CGG | + | chr1_2:67534712-67534731 | Msa0086790:CDS | 40.0% | |
| ! | AAGCCTTCTGAATCTGCTTT+TGG | - | chr1_2:67534739-67534758 | None:intergenic | 40.0% |
| AAGCAGATTCAGAAGGCTTT+CGG | + | chr1_2:67534740-67534759 | Msa0086790:CDS | 40.0% | |
| CCGCAAAGAATTGAAATCGG+CGG | - | chr1_2:67528895-67528914 | None:intergenic | 45.0% | |
| !! | CCGCCGATTTCAATTCTTTG+CGG | + | chr1_2:67528892-67528911 | Msa0086790:five_prime_UTR | 45.0% |
| AGAGAGAGGAAGAGATCGAT+TGG | - | chr1_2:67528928-67528947 | None:intergenic | 45.0% | |
| GCGTGATCTAATCTAGATCG+AGG | - | chr1_2:67528981-67529000 | None:intergenic | 45.0% | |
| TGGTTCGTTTGGCATTAGTC+CGG | + | chr1_2:67529323-67529342 | Msa0086790:intron | 45.0% | |
| GACCTATGTTGTAAGGATCG+CGG | + | chr1_2:67529379-67529398 | Msa0086790:intron | 45.0% | |
| TTCCGCGATCCTTACAACAT+AGG | - | chr1_2:67529384-67529403 | None:intergenic | 45.0% | |
| ! | GAGGCAGTAAGTTTTGCAAC+TGG | - | chr1_2:67529587-67529606 | None:intergenic | 45.0% |
| GTTGCAAAACTTACTGCCTC+AGG | + | chr1_2:67529587-67529606 | Msa0086790:CDS | 45.0% | |
| ATTTGGCAGAAATTCCAGGG+TGG | + | chr1_2:67530031-67530050 | Msa0086790:intron | 45.0% | |
| GGCATAAACGTGTACACCAT+CGG | + | chr1_2:67530142-67530161 | Msa0086790:CDS | 45.0% | |
| !! | GGGATCTTTTAGGGGCATAT+TGG | + | chr1_2:67530340-67530359 | Msa0086790:CDS | 45.0% |
| ! | CACAAGTCTGTTTTCACCCT+TGG | - | chr1_2:67530529-67530548 | None:intergenic | 45.0% |
| TGTGTAGCTCTCTGTAGAAG+AGG | + | chr1_2:67530651-67530670 | Msa0086790:intron | 45.0% | |
| ATATGACCATTACGTGCGCA+AGG | - | chr1_2:67530780-67530799 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1_2:67531075-67531094 | None:intergenic | 45.0% |
| !!! | GCGACACTCATTTTGAAACG+GGG | + | chr1_2:67531074-67531093 | Msa0086790:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+GGG | + | chr1_2:67531075-67531094 | Msa0086790:intron | 45.0% |
| !!! | GACACTCATTTTGAAACGGG+GGG | + | chr1_2:67531076-67531095 | Msa0086790:intron | 45.0% |
| CGTTCTTTGTCCTTCTTGTC+TGG | + | chr1_2:67531349-67531368 | Msa0086790:intron | 45.0% | |
| CTACTATGTCTTTGTGTGGG+TGG | - | chr1_2:67531476-67531495 | None:intergenic | 45.0% | |
| !!! | TCCTGGAAAGCATTTTCGGT+GGG | - | chr1_2:67531657-67531676 | None:intergenic | 45.0% |
| GCTTGTACAATTGAAGACCC+TGG | - | chr1_2:67531684-67531703 | None:intergenic | 45.0% | |
| !! | CATGTTTTTGATGGAGAGGC+TGG | + | chr1_2:67531999-67532018 | Msa0086790:CDS | 45.0% |
| ATGGAGAGGCTGGAAAGATT+GGG | + | chr1_2:67532009-67532028 | Msa0086790:CDS | 45.0% | |
| TATTTGACCACACTAGCCAG+TGG | - | chr1_2:67532519-67532538 | None:intergenic | 45.0% | |
| ! | CTTCCCTTTGGTTTCTTCAC+GGG | + | chr1_2:67532645-67532664 | Msa0086790:intron | 45.0% |
| CTTCCCGTGAAGAAACCAAA+GGG | - | chr1_2:67532651-67532670 | None:intergenic | 45.0% | |
| TCATGGTTCATTTCATGCCC+TGG | - | chr1_2:67532680-67532699 | None:intergenic | 45.0% | |
| AGGGCATGAAATGAACCATG+AGG | + | chr1_2:67532679-67532698 | Msa0086790:intron | 45.0% | |
| GATTAAATATGGGGGCGGAA+AGG | - | chr1_2:67532724-67532743 | None:intergenic | 45.0% | |
| CACGCCTTTACCTATGTGAA+AGG | - | chr1_2:67533127-67533146 | None:intergenic | 45.0% | |
| CTTTCACATAGGTAAAGGCG+TGG | + | chr1_2:67533125-67533144 | Msa0086790:intron | 45.0% | |
| ATTGAAATGCCAGAAGCTGC+TGG | + | chr1_2:67533171-67533190 | Msa0086790:CDS | 45.0% | |
| GTCCATTAAGTCAAGGTGAC+TGG | - | chr1_2:67533426-67533445 | None:intergenic | 45.0% | |
| ! | TGGACATTTAGGACTTCGAG+TGG | + | chr1_2:67533441-67533460 | Msa0086790:intron | 45.0% |
| TTACAGACAAGCTGAGGCTT+TGG | + | chr1_2:67533799-67533818 | Msa0086790:intron | 45.0% | |
| GGCTTAAAGAACAAAAGGCG+AGG | + | chr1_2:67533846-67533865 | Msa0086790:CDS | 45.0% | |
| ! | AAAGGGTGCATCAGAAACAC+AGG | + | chr1_2:67533896-67533915 | Msa0086790:CDS | 45.0% |
| AAGTCACATGCAGCCAAAGA+TGG | - | chr1_2:67533944-67533963 | None:intergenic | 45.0% | |
| CATTTCCCAGACACCAATGA+AGG | + | chr1_2:67533983-67534002 | Msa0086790:CDS | 45.0% | |
| ! | CTACACCTTCATTGGTGTCT+GGG | - | chr1_2:67533991-67534010 | None:intergenic | 45.0% |
| ! | TCTACACCTTCATTGGTGTC+TGG | - | chr1_2:67533992-67534011 | None:intergenic | 45.0% |
| ! | CACCAATGAAGGTGTAGATG+AGG | + | chr1_2:67533994-67534013 | Msa0086790:CDS | 45.0% |
| TTGTGACACTGATCAGAACG+TGG | + | chr1_2:67534036-67534055 | Msa0086790:CDS | 45.0% | |
| ACATAATCCTCGACGCACAA+TGG | + | chr1_2:67534141-67534160 | Msa0086790:CDS | 45.0% | |
| AACTTTACCACTATCACGGC+TGG | - | chr1_2:67534281-67534300 | None:intergenic | 45.0% | |
| !! | GCCGTGATAGTGGTAAAGTT+TGG | + | chr1_2:67534281-67534300 | Msa0086790:CDS | 45.0% |
| GGCAAACCAGAATATTGGTC+AGG | + | chr1_2:67534483-67534502 | Msa0086790:CDS | 45.0% | |
| GCTTCTCCTGACCAATATTC+TGG | - | chr1_2:67534492-67534511 | None:intergenic | 45.0% | |
| AAACCTGACTCCTTTCATGG+AGG | + | chr1_2:67534517-67534536 | Msa0086790:CDS | 45.0% | |
| CTGATTGTTGCCTCCATGAA+AGG | - | chr1_2:67534530-67534549 | None:intergenic | 45.0% | |
| !! | TTAGTTTCATGCTGGCTCAC+TGG | - | chr1_2:67534574-67534593 | None:intergenic | 45.0% |
| !! | GTCTCAACACTTTGAAGTGG+TGG | - | chr1_2:67534601-67534620 | None:intergenic | 45.0% |
| ACAGAAGTTGACGTAGTCCA+TGG | + | chr1_2:67534619-67534638 | Msa0086790:CDS | 45.0% | |
| ! | GATGGAGGCAATATGGGTTA+TGG | + | chr1_2:67534694-67534713 | Msa0086790:CDS | 45.0% |
| ATGGGAACAAATCTCACGTC+GGG | + | chr1_2:67534713-67534732 | Msa0086790:CDS | 45.0% | |
| !! | TTGAAGCAAGTGTTGGTTGG+TGG | + | chr1_2:67534931-67534950 | Msa0086790:CDS | 45.0% |
| !! | TGAAGCAAGTGTTGGTTGGT+GGG | + | chr1_2:67534932-67534951 | Msa0086790:CDS | 45.0% |
| !! | ATTCAAAAATATAAAAATTA+TGG | + | chr1_2:67529303-67529322 | Msa0086790:intron | 5.0% |
| !!! | AAAATATTTTTACTATAAAA+GGG | - | chr1_2:67532120-67532139 | None:intergenic | 5.0% |
| !!! | AAAAATATTTTTACTATAAA+AGG | - | chr1_2:67532121-67532140 | None:intergenic | 5.0% |
| GAATTGAAATCGGCGGCGTA+GGG | - | chr1_2:67528888-67528907 | None:intergenic | 50.0% | |
| AGAATTGAAATCGGCGGCGT+AGG | - | chr1_2:67528889-67528908 | None:intergenic | 50.0% | |
| TGAGATGACGTACGAGAGAG+AGG | - | chr1_2:67528942-67528961 | None:intergenic | 50.0% | |
| GTACTGTAGCGCTATTGCAG+TGG | - | chr1_2:67529427-67529446 | None:intergenic | 50.0% | |
| GCCCTAGGAAAGGAAAGGAA+TGG | - | chr1_2:67529689-67529708 | None:intergenic | 50.0% | |
| TTCCTTTCCTTTCCTAGGGC+TGG | + | chr1_2:67529689-67529708 | Msa0086790:CDS | 50.0% | |
| ACCTTTGCAGGAGAGAACAG+AGG | - | chr1_2:67530057-67530076 | None:intergenic | 50.0% | |
| GCTCTCTGTAGAAGAGGCAA+AGG | + | chr1_2:67530657-67530676 | Msa0086790:intron | 50.0% | |
| GATTTGCCTTGCGCACGTAA+TGG | + | chr1_2:67530771-67530790 | Msa0086790:intron | 50.0% | |
| GCATAAATGAAAGTGGGGGG+AGG | + | chr1_2:67531113-67531132 | Msa0086790:intron | 50.0% | |
| !!! | CTGGAAAGCATTTTCGGTGG+GGG | - | chr1_2:67531655-67531674 | None:intergenic | 50.0% |
| !!! | CCTGGAAAGCATTTTCGGTG+GGG | - | chr1_2:67531656-67531675 | None:intergenic | 50.0% |
| !!! | CTCCTGGAAAGCATTTTCGG+TGG | - | chr1_2:67531658-67531677 | None:intergenic | 50.0% |
| CACCGAAAATGCTTTCCAGG+AGG | + | chr1_2:67531656-67531675 | Msa0086790:intron | 50.0% | |
| AATGCTTTCCAGGAGGTTCC+AGG | + | chr1_2:67531663-67531682 | Msa0086790:intron | 50.0% | |
| ATGCTTTCCAGGAGGTTCCA+GGG | + | chr1_2:67531664-67531683 | Msa0086790:intron | 50.0% | |
| CCAGCCCTGAGATAATACTG+TGG | - | chr1_2:67531747-67531766 | None:intergenic | 50.0% | |
| CCACAGTATTATCTCAGGGC+TGG | + | chr1_2:67531744-67531763 | Msa0086790:CDS | 50.0% | |
| GATGGAGAGGCTGGAAAGAT+TGG | + | chr1_2:67532008-67532027 | Msa0086790:CDS | 50.0% | |
| AGAGAGAGAGAGAGACAGAG+AGG | - | chr1_2:67532148-67532167 | None:intergenic | 50.0% | |
| TGCCACACTTCCCTCTTGTT+TGG | + | chr1_2:67532339-67532358 | Msa0086790:intron | 50.0% | |
| ! | GCCACACTTCCCTCTTGTTT+GGG | + | chr1_2:67532340-67532359 | Msa0086790:intron | 50.0% |
| ! | CCACACTTCCCTCTTGTTTG+GGG | + | chr1_2:67532341-67532360 | Msa0086790:intron | 50.0% |
| CTCGGCATGATATTGCACGA+GGG | + | chr1_2:67532439-67532458 | Msa0086790:intron | 50.0% | |
| TTCACCAAATAGCAGGCCAC+TGG | + | chr1_2:67532500-67532519 | Msa0086790:intron | 50.0% | |
| CCTTCCCGTGAAGAAACCAA+AGG | - | chr1_2:67532652-67532671 | None:intergenic | 50.0% | |
| ! | CCTTTGGTTTCTTCACGGGA+AGG | + | chr1_2:67532649-67532668 | Msa0086790:intron | 50.0% |
| TTCACGGGAAGGTTGTACCA+GGG | + | chr1_2:67532660-67532679 | Msa0086790:intron | 50.0% | |
| AGGAGGAAGCTGCTCAAAGA+AGG | + | chr1_2:67533200-67533219 | Msa0086790:CDS | 50.0% | |
| GCGAGGGACCAACTTGAAAA+TGG | + | chr1_2:67533863-67533882 | Msa0086790:CDS | 50.0% | |
| GTGCATCAGAAACACAGGAG+AGG | + | chr1_2:67533901-67533920 | Msa0086790:CDS | 50.0% | |
| ATCGCGAGAGGAACCATCTT+TGG | + | chr1_2:67533928-67533947 | Msa0086790:CDS | 50.0% | |
| AATGGAACCAGCCGTGATAG+TGG | + | chr1_2:67534271-67534290 | Msa0086790:CDS | 50.0% | |
| TTGCCTCCATGAAAGGAGTC+AGG | - | chr1_2:67534523-67534542 | None:intergenic | 50.0% | |
| CATGGAGGCAACAATCAGTC+AGG | + | chr1_2:67534532-67534551 | Msa0086790:CDS | 50.0% | |
| GGGCCAAAAGCAGATTCAGA+AGG | + | chr1_2:67534733-67534752 | Msa0086790:CDS | 50.0% | |
| ! | AAAGGCTTTTGCAGCATCGC+TGG | - | chr1_2:67534770-67534789 | None:intergenic | 50.0% |
| CTACAATAGGTGCAGCGTGC+AGG | + | chr1_2:67528819-67528838 | Msa0086790:five_prime_UTR | 55.0% | |
| AATAGGTGCAGCGTGCAGGA+AGG | + | chr1_2:67528823-67528842 | Msa0086790:five_prime_UTR | 55.0% | |
| CGGCGTAGGGATTGAGAAGA+AGG | - | chr1_2:67528875-67528894 | None:intergenic | 55.0% | |
| CACCAGCCCTAGGAAAGGAA+AGG | - | chr1_2:67529694-67529713 | None:intergenic | 55.0% | |
| CTTTCCTTTCCTAGGGCTGG+TGG | + | chr1_2:67529692-67529711 | Msa0086790:CDS | 55.0% | |
| GCCTCTGTTCTCTCCTGCAA+AGG | + | chr1_2:67530053-67530072 | Msa0086790:CDS | 55.0% | |
| CCCCACCGAAAATGCTTTCC+AGG | + | chr1_2:67531653-67531672 | Msa0086790:intron | 55.0% | |
| TTGAAGACCCTGGAACCTCC+TGG | - | chr1_2:67531674-67531693 | None:intergenic | 55.0% | |
| !!! | CAGGGCTGGTTTCTCCCTTT+TGG | + | chr1_2:67531758-67531777 | Msa0086790:CDS | 55.0% |
| CCCCAAACAAGAGGGAAGTG+TGG | - | chr1_2:67532344-67532363 | None:intergenic | 55.0% | |
| CCTCGTGCAATATCATGCCG+AGG | - | chr1_2:67532441-67532460 | None:intergenic | 55.0% | |
| CCTCGGCATGATATTGCACG+AGG | + | chr1_2:67532438-67532457 | Msa0086790:intron | 55.0% | |
| CTAGCCAGTGGCCTGCTATT+TGG | - | chr1_2:67532507-67532526 | None:intergenic | 55.0% | |
| CTTCACGGGAAGGTTGTACC+AGG | + | chr1_2:67532659-67532678 | Msa0086790:intron | 55.0% | |
| GAAATGCCAGAAGCTGCTGG+TGG | + | chr1_2:67533174-67533193 | Msa0086790:CDS | 55.0% | |
| AGGAGAGGAGATATCGCGAG+AGG | + | chr1_2:67533916-67533935 | Msa0086790:CDS | 55.0% | |
| CTTAGGATGCCTTAGCCGTC+TGG | - | chr1_2:67534170-67534189 | None:intergenic | 55.0% | |
| GTCACCACCAGCCCTAGGAA+AGG | - | chr1_2:67529699-67529718 | None:intergenic | 60.0% | |
| ! | TTCCTAGGGCTGGTGGTGAC+AGG | + | chr1_2:67529699-67529718 | Msa0086790:CDS | 60.0% |
| ! | TAGCAGGCCACTGGCTAGTG+TGG | + | chr1_2:67532509-67532528 | Msa0086790:intron | 60.0% |
| ATGCCAGAAGCTGCTGGTGG+AGG | + | chr1_2:67533177-67533196 | Msa0086790:CDS | 60.0% | |
| GACGCACAATGGCTGCCAGA+CGG | + | chr1_2:67534152-67534171 | Msa0086790:CDS | 60.0% | |
| CAATGGCTGCCAGACGGCTA+AGG | + | chr1_2:67534158-67534177 | Msa0086790:CDS | 60.0% | |
| GTGGTGACAGGCCAGCACAG+TGG | + | chr1_2:67529711-67529730 | Msa0086790:CDS | 65.0% | |
| GGAGAGAACAGAGGCCACCC+TGG | - | chr1_2:67530048-67530067 | None:intergenic | 65.0% | |
| CCAGGGACAGAGTCGCCTCA+TGG | - | chr1_2:67532697-67532716 | None:intergenic | 65.0% | |
| CCATGAGGCGACTCTGTCCC+TGG | + | chr1_2:67532694-67532713 | Msa0086790:intron | 65.0% | |
| CCTCCTCCACCAGCAGCTTC+TGG | - | chr1_2:67533183-67533202 | None:intergenic | 65.0% | |
| CCAGAAGCTGCTGGTGGAGG+AGG | + | chr1_2:67533180-67533199 | Msa0086790:CDS | 65.0% | |
| GAAGCTGCTGGTGGAGGAGG+AGG | + | chr1_2:67533183-67533202 | Msa0086790:CDS | 65.0% | |
| CTGGCAGCCATTGTGCGTCG+AGG | - | chr1_2:67534151-67534170 | None:intergenic | 65.0% | |
| GGCCTGTCACCACCAGCCCT+AGG | - | chr1_2:67529704-67529723 | None:intergenic | 70.0% | |
| GGGGGCGGAAAGGGATGCCA+GGG | - | chr1_2:67532714-67532733 | None:intergenic | 70.0% | |
| TGGGGGCGGAAAGGGATGCC+AGG | - | chr1_2:67532715-67532734 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 67528748 | 67534963 | 67528748 | ID=Msa0086790;Name=Msa0086790 |
| chr1_2 | mRNA | 67528748 | 67534963 | 67528748 | ID=Msa0086790-mRNA-1;Parent=Msa0086790;Name=Msa0086790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=243|0.88|0.8|0.9|0.88|0.8|10|0|608 |
| chr1_2 | exon | 67528748 | 67528948 | 67528748 | ID=Msa0086790-mRNA-1:exon:22913;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67529539 | 67529767 | 67529539 | ID=Msa0086790-mRNA-1:exon:22914;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67530040 | 67530182 | 67530040 | ID=Msa0086790-mRNA-1:exon:22915;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67530324 | 67530368 | 67530324 | ID=Msa0086790-mRNA-1:exon:22916;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67530658 | 67530711 | 67530658 | ID=Msa0086790-mRNA-1:exon:22917;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67531675 | 67531779 | 67531675 | ID=Msa0086790-mRNA-1:exon:22918;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67531882 | 67532085 | 67531882 | ID=Msa0086790-mRNA-1:exon:22919;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67533136 | 67533221 | 67533136 | ID=Msa0086790-mRNA-1:exon:22920;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67533805 | 67534761 | 67533805 | ID=Msa0086790-mRNA-1:exon:22921;Parent=Msa0086790-mRNA-1 |
| chr1_2 | exon | 67534918 | 67534963 | 67534918 | ID=Msa0086790-mRNA-1:exon:22922;Parent=Msa0086790-mRNA-1 |
| chr1_2 | five_prime_UTR | 67528748 | 67528948 | 67528748 | ID=Msa0086790-mRNA-1:five_prime_utr;Parent=Msa0086790-mRNA-1 |
| chr1_2 | five_prime_UTR | 67529539 | 67529580 | 67529539 | ID=Msa0086790-mRNA-1:five_prime_utr;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67529581 | 67529767 | 67529581 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67530040 | 67530182 | 67530040 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67530324 | 67530368 | 67530324 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67530658 | 67530711 | 67530658 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67531675 | 67531779 | 67531675 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67531882 | 67532085 | 67531882 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67533136 | 67533221 | 67533136 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67533805 | 67534761 | 67533805 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| chr1_2 | CDS | 67534918 | 67534963 | 67534918 | ID=Msa0086790-mRNA-1:cds;Parent=Msa0086790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
