AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0416030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416030 MtrunA17_Chr3g0112401 99.169 361 3 0 1 361 1 361 0.0 728
Msa0416030 MtrunA17_Chr5g0435771 93.075 361 25 0 1 361 1 361 0.0 686
Msa0416030 MtrunA17_Chr4g0076111 74.618 327 38 2 35 361 9 290 4.29e-171 478
Msa0416030 MtrunA17_Chr3g0118161 32.250 400 223 7 3 354 10 409 5.41e-64 209
Msa0416030 MtrunA17_Chr6g0451921 32.432 407 226 8 3 361 9 414 6.12e-63 206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416030 AT2G39770.2 90.859 361 33 0 1 361 1 361 0.0 679
Msa0416030 AT2G39770.3 90.859 361 33 0 1 361 1 361 0.0 679
Msa0416030 AT2G39770.1 90.859 361 33 0 1 361 1 361 0.0 679
Msa0416030 AT3G55590.1 83.516 364 57 1 1 361 1 364 0.0 627
Msa0416030 AT4G30570.1 76.596 329 76 1 21 348 1 329 0.0 517
Msa0416030 AT2G04650.1 32.570 393 224 7 3 354 8 400 1.27e-65 213
Msa0416030 AT2G04650.2 32.208 385 222 6 9 354 4 388 4.01e-65 212
Msa0416030 AT1G74910.2 31.034 406 232 8 3 361 11 415 4.81e-65 212
Msa0416030 AT1G74910.1 31.034 406 232 8 3 361 11 415 4.81e-65 212
Msa0416030 AT1G74910.3 30.411 365 216 6 3 329 11 375 3.34e-58 194

Find 142 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAATATGCCTTGTTTAT+TGG 0.092539 3_2:+62596352 None:intergenic
ATTCAATTGGAAGTTATTTA+TGG 0.139429 3_2:-62596256 Msa0416030:five_prime_UTR
ATTATTTGAGGTCACAAAAT+TGG 0.150473 3_2:-62591842 Msa0416030:three_prime_UTR
CCTTTCAACTTTATAAATTA+TGG 0.169583 3_2:+62591939 None:intergenic
GGCCAGTGGCCCTCACATTT+TGG 0.174139 3_2:-62592455 Msa0416030:CDS
TGTTCTCTTCCAGCCTTTCT+TGG 0.191543 3_2:-62594344 Msa0416030:intron
CTTCTTGACTCGTTCGAGTT+AGG 0.194509 3_2:-62596103 Msa0416030:five_prime_UTR
GAGACATCCCTCGCCAATTT+TGG 0.195747 3_2:+62592408 None:intergenic
CAATGGTTCTGCCTGGATTC+TGG 0.230745 3_2:-62592561 Msa0416030:CDS
TTGATTCTGGTTGGAGGGTT+TGG 0.231295 3_2:-62594263 Msa0416030:CDS
CACACTACATGCTAAGAATT+TGG 0.235614 3_2:+62592091 None:intergenic
CACAATGAAGGCATTGATTC+TGG 0.244864 3_2:-62594276 Msa0416030:exon
CGCCAAACCCTCAATTCTTC+AGG 0.259392 3_2:-62596067 Msa0416030:intron
CCTATTGAACCCCTCAGTTT+TGG 0.269147 3_2:-62592659 Msa0416030:CDS
TGTTACTTGAAGACTTAAAA+AGG 0.276415 3_2:-62596330 Msa0416030:five_prime_UTR
AATTACCTTTGTCACCATTA+TGG 0.298623 3_2:+62592873 None:intergenic
ACTCGATCGGTGCCACTAAA+AGG 0.303711 3_2:+62591798 None:intergenic
TTCTTGACTCGTTCGAGTTA+GGG 0.345159 3_2:-62596102 Msa0416030:five_prime_UTR
CACTGAAAATTACACAGCTT+TGG 0.355062 3_2:+62591884 None:intergenic
AAATATGTATTCATTTCATT+TGG 0.358212 3_2:-62592035 Msa0416030:three_prime_UTR
GTGCATGAGACAGCCAAAAT+TGG 0.360392 3_2:-62592421 Msa0416030:CDS
TTATTTGAGGTCACAAAATT+GGG 0.367629 3_2:-62591841 Msa0416030:three_prime_UTR
GTTGACGAGCCATCGAAATA+TGG 0.375253 3_2:-62592775 Msa0416030:CDS
TTTGCAGATAGAGGCTCTTA+AGG 0.376635 3_2:-62593270 Msa0416030:intron
TATAGTTATTCTAATTCAAT+TGG 0.378406 3_2:-62596269 Msa0416030:five_prime_UTR
GGCATTCAACTGTTGGTCAA+TGG 0.378871 3_2:-62592258 Msa0416030:CDS
GCATTCAACTGTTGGTCAAT+GGG 0.390410 3_2:-62592257 Msa0416030:CDS
CTTCTCCTCCATGAGATTTG+TGG 0.394590 3_2:+62592899 None:intergenic
GAAATATGGTGTAGTTGTTA+TGG 0.396468 3_2:-62592761 Msa0416030:CDS
CAAAATTGGGATTCTTTGAC+AGG 0.413907 3_2:-62591828 Msa0416030:three_prime_UTR
CCAAAACTGAGGGGTTCAAT+AGG 0.416025 3_2:+62592659 None:intergenic
CTCTCAAGAAACTGAACCAT+TGG 0.424571 3_2:-62593040 Msa0416030:CDS
AGCAAAATCAACAAGAGGCT+TGG 0.428162 3_2:+62594208 None:intergenic
AAAGAAACCTGAAGAATTGA+GGG 0.431335 3_2:+62596060 None:intergenic
AACCTGAAGAATTGAGGGTT+TGG 0.432730 3_2:+62596065 None:intergenic
ATTGGACCTGATGTTGCAAT+TGG 0.435688 3_2:-62592385 Msa0416030:CDS
CAAGCCCATGATTCTGCATC+AGG 0.436008 3_2:-62594183 Msa0416030:intron
ATTGGGGACTGCAGGTCCCT+TGG 0.442280 3_2:-62593022 Msa0416030:CDS
CCCCAAAATGTGAGGGCCAC+TGG 0.444498 3_2:+62592453 None:intergenic
GAATTTCTTGAAGGACTTTG+AGG 0.444711 3_2:-62593088 Msa0416030:CDS
CCTGATGTTGCAATTGGTCC+TGG 0.445714 3_2:-62592379 Msa0416030:CDS
CAGCCAAGGGACTATATAAC+AGG 0.445775 3_2:-62592526 Msa0416030:CDS
GCCAGAGATAAGCTGATTGA+TGG 0.448757 3_2:-62592994 Msa0416030:CDS
AAAAGAAACCTGAAGAATTG+AGG 0.451583 3_2:+62596059 None:intergenic
GTGAGGGCCACTGGCCAACT+TGG 0.453022 3_2:+62592462 None:intergenic
TAGCCTCACATGACTATCTC+TGG 0.457298 3_2:+62592121 None:intergenic
GTTGGCAACAAAATCAATGC+TGG 0.457593 3_2:-62592688 Msa0416030:CDS
GCAAAATCAACAAGAGGCTT+GGG 0.462216 3_2:+62594209 None:intergenic
GTACTATTGAGTCAGGTGTC+AGG 0.462789 3_2:-62592354 Msa0416030:CDS
CCTTACCTGATGCAGAATCA+TGG 0.467053 3_2:+62594178 None:intergenic
TCTCAAGAAACTGAACCATT+GGG 0.467960 3_2:-62593039 Msa0416030:CDS
TTTGTTGCCAACAAACAACT+TGG 0.477074 3_2:+62592699 None:intergenic
ATTGGCGAGGGATGTCTCAT+TGG 0.477910 3_2:-62592403 Msa0416030:CDS
AATTCTATCATTTCTTTGAG+TGG 0.484489 3_2:+62592922 None:intergenic
GGTGATGTTGAATTTCTTGA+AGG 0.486495 3_2:-62593097 Msa0416030:CDS
GCCATCAATCAGCTTATCTC+TGG 0.487352 3_2:+62592993 None:intergenic
GAGAAACCCAAGTTGTTTGT+TGG 0.488405 3_2:-62592706 Msa0416030:CDS
TGCATATCCAGCAGCATCAT+CGG 0.488487 3_2:-62592283 Msa0416030:CDS
CCTGGCTGTACTATTGAGTC+AGG 0.491456 3_2:-62592361 Msa0416030:CDS
TTGGGAACGCTGAGTGTCAA+TGG 0.493354 3_2:+62594227 None:intergenic
ACCCACTTCTATTGAGAAAG+AGG 0.506248 3_2:-62592620 Msa0416030:CDS
TGGAGGAGAAGCTTCCATAA+TGG 0.508219 3_2:-62592887 Msa0416030:CDS
AATTGGAAGTTATTTATGGA+TGG 0.510192 3_2:-62596252 Msa0416030:five_prime_UTR
GCATATCCAGCAGCATCATC+GGG 0.514239 3_2:-62592282 Msa0416030:CDS
TGGTTGGAGGGTTTGGAACA+AGG 0.517924 3_2:-62594256 Msa0416030:CDS
GAGGGTTTGGAACAAGGTTG+AGG 0.519056 3_2:-62594250 Msa0416030:CDS
ATGAAGGCATTGATTCTGGT+TGG 0.520723 3_2:-62594272 Msa0416030:CDS
GAAGAAGACTTCTTCCAAGT+TGG 0.520882 3_2:-62592476 Msa0416030:CDS
ATCGGGTGGCATTCAACTGT+TGG 0.522221 3_2:-62592265 Msa0416030:CDS
CCTGGATTCTGGATGGACAT+TGG 0.522294 3_2:-62592550 Msa0416030:CDS
ATAGAATTCCACAAATCTCA+TGG 0.522477 3_2:-62592907 Msa0416030:CDS
CTATATGCAATGGTTCTGCC+TGG 0.525369 3_2:-62592568 Msa0416030:CDS
AACAGGTCTGAGACTCTACC+TGG 0.527965 3_2:-62592509 Msa0416030:CDS
CCAATGTCCATCCAGAATCC+AGG 0.528298 3_2:+62592550 None:intergenic
CCAGGACCAATTGCAACATC+AGG 0.528530 3_2:+62592379 None:intergenic
AACAAATTTCTCAACCTGCC+CGG 0.528886 3_2:+62592729 None:intergenic
ACTGAACCATTGGGGACTGC+AGG 0.534135 3_2:-62593030 Msa0416030:CDS
TCTTAGCATGTAGTGTGTCT+AGG 0.536433 3_2:-62592085 Msa0416030:three_prime_UTR
AGACCTGTTATATAGTCCCT+TGG 0.537146 3_2:+62592523 None:intergenic
CTTATCTCTGGCAAGAGCCA+AGG 0.538273 3_2:+62593005 None:intergenic
ATGCCACCCGATGATGCTGC+TGG 0.538528 3_2:+62592276 None:intergenic
TGGAGTTACTGAAGTGGTGC+TGG 0.539605 3_2:-62593243 Msa0416030:CDS
CAAAGGTCACATCACAATGA+AGG 0.540103 3_2:-62594288 Msa0416030:exon
GCACTGTAATGAGAGGAGTT+CGG 0.540270 3_2:-62592321 Msa0416030:CDS
ATGAGGTGTTACGATTGTAT+TGG 0.541000 3_2:+62596197 None:intergenic
CACCTCTTTCTCAATAGAAG+TGG 0.543517 3_2:+62592618 None:intergenic
TGTTGGTCAATGGGCTCGCG+TGG 0.545394 3_2:-62592248 Msa0416030:CDS
AGGCATTGATTCTGGTTGGA+GGG 0.546975 3_2:-62594268 Msa0416030:CDS
AAGGCATTGATTCTGGTTGG+AGG 0.548820 3_2:-62594269 Msa0416030:CDS
CTTGTTTATTGGACTATCGT+CGG 0.549459 3_2:+62596363 None:intergenic
TTTACAATGTGCGGGGAAGG+AGG 0.549974 3_2:+62591989 None:intergenic
TTGGCAACAAAATCAATGCT+GGG 0.556088 3_2:-62592687 Msa0416030:CDS
CCATAATTTATAAAGTTGAA+AGG 0.559634 3_2:-62591939 Msa0416030:three_prime_UTR
ACGATTGTATTGGTCAATGT+TGG 0.561076 3_2:+62596207 None:intergenic
GTGGAGAATATGACTATCCT+TGG 0.561456 3_2:-62592229 Msa0416030:CDS
ATAGAGGCTCTTAAGGACAT+TGG 0.566425 3_2:-62593263 Msa0416030:CDS
TCTTCTTCCTGAGTGAGTCC+AGG 0.570610 3_2:+62592491 None:intergenic
TTATCTCTGGCAAGAGCCAA+GGG 0.571035 3_2:+62593006 None:intergenic
TCAATATGATCCAAAACTGA+GGG 0.571408 3_2:+62592649 None:intergenic
GACTCTACCTGGACTCACTC+AGG 0.571470 3_2:-62592498 Msa0416030:CDS
CTTACCTGATGCAGAATCAT+GGG 0.572676 3_2:+62594179 None:intergenic
CTACATGCTAAGAATTTGGA+AGG 0.578323 3_2:+62592095 None:intergenic
ACCTCTTTCTCAATAGAAGT+GGG 0.579545 3_2:+62592619 None:intergenic
TATGGAAGAGACTACCGGGC+AGG 0.580495 3_2:-62592743 Msa0416030:CDS
TTACAATGTGCGGGGAAGGA+GGG 0.581779 3_2:+62591990 None:intergenic
TTGTTGCCAACAAACAACTT+GGG 0.582555 3_2:+62592700 None:intergenic
GGTTCTGCCTGGATTCTGGA+TGG 0.583086 3_2:-62592557 Msa0416030:CDS
ATCACATTCCCCAAAATGTG+AGG 0.586656 3_2:+62592445 None:intergenic
TCAGTGTCTATGTAAAGAGT+TGG 0.587085 3_2:-62591916 Msa0416030:three_prime_UTR
AGCTTCCATAATGGTGACAA+AGG 0.594491 3_2:-62592878 Msa0416030:intron
GGATGGACATTGGACAGCCA+AGG 0.596026 3_2:-62592540 Msa0416030:CDS
CGACGATAGTCCAATAAACA+AGG 0.605330 3_2:-62596362 Msa0416030:five_prime_UTR
TTCAATATGATCCAAAACTG+AGG 0.607441 3_2:+62592648 None:intergenic
GATGGACATTGGACAGCCAA+GGG 0.607762 3_2:-62592539 Msa0416030:CDS
TCAAGTTGCACTGTAATGAG+AGG 0.608923 3_2:-62592328 Msa0416030:CDS
AAGGGACCTGCAGTCCCCAA+TGG 0.610136 3_2:+62593024 None:intergenic
ACTTCTTCCAAGTTGGCCAG+TGG 0.612092 3_2:-62592469 Msa0416030:CDS
GTTGTTATGGAAGAGACTAC+CGG 0.612863 3_2:-62592748 Msa0416030:CDS
TAGCATGTAGTGTGTCTAGG+AGG 0.613908 3_2:-62592082 Msa0416030:three_prime_UTR
ACAACTACACCATATTTCGA+TGG 0.616973 3_2:+62592766 None:intergenic
TTGTTAGCAAAATCAACAAG+AGG 0.621493 3_2:+62594203 None:intergenic
TGAGACAGCCAAAATTGGCG+AGG 0.624566 3_2:-62592416 Msa0416030:CDS
GCACAATCCATACCTCTGGT+TGG 0.626350 3_2:+62593210 None:intergenic
GTTTATTGGACTATCGTCGG+TGG 0.627252 3_2:+62596366 None:intergenic
CCTGACTCAATAGTACAGCC+AGG 0.628206 3_2:+62592361 None:intergenic
ATACATGGACATCTTCTCCA+AGG 0.629569 3_2:+62592212 None:intergenic
CTCAAGAAACTGAACCATTG+GGG 0.633701 3_2:-62593038 Msa0416030:CDS
TGTAAACTTCATCAGATACA+TGG 0.633717 3_2:+62592197 None:intergenic
TTGTTATGGAAGAGACTACC+GGG 0.634181 3_2:-62592747 Msa0416030:CDS
TCTGATGAAGTTTACAGCAA+TGG 0.634276 3_2:-62592190 Msa0416030:CDS
GAGACAGCCAAAATTGGCGA+GGG 0.639601 3_2:-62592415 Msa0416030:CDS
GGACATTGGAGTTACTGAAG+TGG 0.642199 3_2:-62593249 Msa0416030:CDS
TCACATTCCCCAAAATGTGA+GGG 0.643108 3_2:+62592446 None:intergenic
CAAGAAGACGAGTTAGAGTG+AGG 0.652032 3_2:+62596119 None:intergenic
AGTTTACAGCAATGGTGGTG+TGG 0.665559 3_2:-62592182 Msa0416030:CDS
GGCTATCAATTACCAACCAG+AGG 0.681698 3_2:-62593222 Msa0416030:intron
GATGAAGTTTACAGCAATGG+TGG 0.691163 3_2:-62592187 Msa0416030:CDS
TATCCAGCAGCATCATCGGG+TGG 0.692094 3_2:-62592279 Msa0416030:CDS
TGGAATGGTGAAACTGAATG+AGG 0.696240 3_2:+62596180 None:intergenic
AATCCAGAGATAGTCATGTG+AGG 0.703190 3_2:-62592124 Msa0416030:exon
CAATATGATCCAAAACTGAG+GGG 0.719526 3_2:+62592650 None:intergenic
GAATTCCACAAATCTCATGG+AGG 0.748000 3_2:-62592904 Msa0416030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACAAAAAAAAC+TGG + chr3_2:62592036-62592055 None:intergenic 10.0%
!! TGAGAATTAATAATAATAAA+GGG + chr3_2:62592200-62592219 None:intergenic 10.0%
!! TTGAGAATTAATAATAATAA+AGG + chr3_2:62592201-62592220 None:intergenic 10.0%
!! TATAGTTATTCTAATTCAAT+TGG - chr3_2:62591924-62591943 Msa0416030:three_prime_UTR 15.0%
!!! TATATAAAGTTGGTTTTTTT+AGG - chr3_2:62592445-62592464 Msa0416030:CDS 15.0%
!!! TAGATAAAAGTTAAGTTTTT+AGG - chr3_2:62593626-62593645 Msa0416030:intron 15.0%
!!! AGATAAAAGTTAAGTTTTTA+GGG - chr3_2:62593627-62593646 Msa0416030:intron 15.0%
!! AAATATGTATTCATTTCATT+TGG - chr3_2:62596158-62596177 Msa0416030:five_prime_UTR 15.0%
!! ATTCAATTGGAAGTTATTTA+TGG - chr3_2:62591937-62591956 Msa0416030:three_prime_UTR 20.0%
!! AAAAACAAAAAAAACTGGAA+TGG + chr3_2:62592031-62592050 None:intergenic 20.0%
!! TGGTGGAAATTATTTAAAAA+AGG - chr3_2:62592385-62592404 Msa0416030:CDS 20.0%
!! AATGTTGAGATATATAAAGT+TGG - chr3_2:62592435-62592454 Msa0416030:CDS 20.0%
!! ATATTTGAAAAACTAATCTC+CGG + chr3_2:62592657-62592676 None:intergenic 20.0%
!!! GATTAGTTTTTCAAATATGT+CGG - chr3_2:62592659-62592678 Msa0416030:CDS 20.0%
!!! GGCTTTTTTATAAAATTTTC+AGG + chr3_2:62592832-62592851 None:intergenic 20.0%
!! ATTATTGGTATATTCAAACA+AGG + chr3_2:62593313-62593332 None:intergenic 20.0%
!! TTGTTTGAATATACCAATAA+TGG - chr3_2:62593312-62593331 Msa0416030:intron 20.0%
!!! TTGGATAATGTTAAGTTTTT+AGG - chr3_2:62593514-62593533 Msa0416030:intron 20.0%
!!! TGGATAATGTTAAGTTTTTA+GGG - chr3_2:62593515-62593534 Msa0416030:intron 20.0%
!! ATTTGCATAAATAAAACTAC+TGG + chr3_2:62593742-62593761 None:intergenic 20.0%
!!! TTCAAAACATTTAATTTTCC+TGG - chr3_2:62593877-62593896 Msa0416030:intron 20.0%
!! TATACTTTGACATACTAAAA+TGG + chr3_2:62594344-62594363 None:intergenic 20.0%
!!! AAATCAACTTGTTGAAATTT+GGG + chr3_2:62594596-62594615 None:intergenic 20.0%
!!! TAAATCAACTTGTTGAAATT+TGG + chr3_2:62594597-62594616 None:intergenic 20.0%
!! TATCTGCAAAACAAATTAAA+AGG + chr3_2:62594913-62594932 None:intergenic 20.0%
!! CCTTTCAACTTTATAAATTA+TGG + chr3_2:62596257-62596276 None:intergenic 20.0%
!! CCATAATTTATAAAGTTGAA+AGG - chr3_2:62596254-62596273 Msa0416030:five_prime_UTR 20.0%
!!! CAGAATTTTCTTATTATTTG+AGG - chr3_2:62596339-62596358 Msa0416030:five_prime_UTR 20.0%
!!! ATTGAATATGCCTTGTTTAT+TGG + chr3_2:62591844-62591863 None:intergenic 25.0%
!! TGTTACTTGAAGACTTAAAA+AGG - chr3_2:62591863-62591882 Msa0416030:three_prime_UTR 25.0%
! AATTGGAAGTTATTTATGGA+TGG - chr3_2:62591941-62591960 Msa0416030:three_prime_UTR 25.0%
!!! GTTTCTTTGTGTTTTTTCAT+TGG - chr3_2:62592305-62592324 Msa0416030:CDS 25.0%
!!! TGCTTTTAATTCAAGCTTTT+TGG - chr3_2:62592365-62592384 Msa0416030:CDS 25.0%
!!! TTTTAATTCAAGCTTTTTGG+TGG - chr3_2:62592368-62592387 Msa0416030:CDS 25.0%
!!! TTAGGGTTTTTAAGATCAAA+TGG - chr3_2:62592590-62592609 Msa0416030:CDS 25.0%
!!! TAGGGTTTTTAAGATCAAAT+GGG - chr3_2:62592591-62592610 Msa0416030:CDS 25.0%
! TATTTGAAAAACTAATCTCC+GGG + chr3_2:62592656-62592675 None:intergenic 25.0%
! TCAATTAAGCTTAAGATACA+AGG + chr3_2:62593541-62593560 None:intergenic 25.0%
! AATTCAAGAAACTCAAGAAA+CGG + chr3_2:62594052-62594071 None:intergenic 25.0%
! AGGGAGAAAATATAACATAT+AGG + chr3_2:62594129-62594148 None:intergenic 25.0%
!! ACAATTTTTCATATCCAACA+AGG - chr3_2:62594263-62594282 Msa0416030:CDS 25.0%
!!! AATCAACTTGTTGAAATTTG+GGG + chr3_2:62594595-62594614 None:intergenic 25.0%
!!! TGTTTTAGGTTAATATAGTG+TGG - chr3_2:62594631-62594650 Msa0416030:intron 25.0%
!!! GTTTTAGGTTAATATAGTGT+GGG - chr3_2:62594632-62594651 Msa0416030:intron 25.0%
! ATTAAAAGGAAAAACACATG+AGG + chr3_2:62594899-62594918 None:intergenic 25.0%
!!! TTAATTTGTTTTGCAGATAG+AGG - chr3_2:62594914-62594933 Msa0416030:intron 25.0%
! AATTCTATCATTTCTTTGAG+TGG + chr3_2:62595274-62595293 None:intergenic 25.0%
! AAACAAAAAGCTATATGCAA+TGG - chr3_2:62595615-62595634 Msa0416030:intron 25.0%
!! ATTATTTGAGGTCACAAAAT+TGG - chr3_2:62596351-62596370 Msa0416030:five_prime_UTR 25.0%
!! TTATTTGAGGTCACAAAATT+GGG - chr3_2:62596352-62596371 Msa0416030:five_prime_UTR 25.0%
AAAGAAACCTGAAGAATTGA+GGG + chr3_2:62592136-62592155 None:intergenic 30.0%
AAAAGAAACCTGAAGAATTG+AGG + chr3_2:62592137-62592156 None:intergenic 30.0%
CTAATCACAAGCATACAATT+TGG + chr3_2:62592267-62592286 None:intergenic 30.0%
!!! GTTGGTTTTTTTAGGACAAA+TGG - chr3_2:62592453-62592472 Msa0416030:CDS 30.0%
!!! TTTTTAGGACAAATGGATCT+AGG - chr3_2:62592460-62592479 Msa0416030:CDS 30.0%
AGTTAGTGGAATGTAACATA+AGG - chr3_2:62592543-62592562 Msa0416030:CDS 30.0%
!!! AATAGTGTCGGTAAAGTTTT+TGG + chr3_2:62592572-62592591 None:intergenic 30.0%
AAAACTTTACCGACACTATT+AGG - chr3_2:62592572-62592591 Msa0416030:CDS 30.0%
AAACTTTACCGACACTATTA+GGG - chr3_2:62592573-62592592 Msa0416030:CDS 30.0%
CTTAAAAACCCTAATAGTGT+CGG + chr3_2:62592584-62592603 None:intergenic 30.0%
!!! AGGGTTTTTAAGATCAAATG+GGG - chr3_2:62592592-62592611 Msa0416030:CDS 30.0%
!! TAGTTTTTCAAATATGTCGG+TGG - chr3_2:62592662-62592681 Msa0416030:CDS 30.0%
CAATTGAAACAAAGTTGCTT+CGG - chr3_2:62592744-62592763 Msa0416030:CDS 30.0%
!!! ATAAAAAAGCCGTTTTTCCA+TGG - chr3_2:62592841-62592860 Msa0416030:intron 30.0%
!! TATCGCAAAACTTGTTGATA+TGG - chr3_2:62592950-62592969 Msa0416030:CDS 30.0%
GTTGATATGGTTAATCAATG+TGG - chr3_2:62592963-62592982 Msa0416030:CDS 30.0%
! CTTTACTTTGAAAGCCATAT+AGG - chr3_2:62593087-62593106 Msa0416030:CDS 30.0%
! ACAGAAAGCTAGTTTATCTA+GGG + chr3_2:62593224-62593243 None:intergenic 30.0%
GTATATTCAAACAAGGATCA+TGG + chr3_2:62593306-62593325 None:intergenic 30.0%
AAACTATTTAATCGTGCAGA+AGG + chr3_2:62593343-62593362 None:intergenic 30.0%
ATTACAAGAATCATAGACGT+AGG + chr3_2:62593462-62593481 None:intergenic 30.0%
!!! GTCTTTTTTCTTACTGCTTT+TGG - chr3_2:62593495-62593514 Msa0416030:intron 30.0%
TCAACTAAGCTTAAGATACA+AGG + chr3_2:62593653-62593672 None:intergenic 30.0%
TTCTATGCTGTCCTATAAAT+AGG + chr3_2:62593806-62593825 None:intergenic 30.0%
! TAATTTTCCTGGAAAAGCAA+AGG - chr3_2:62593888-62593907 Msa0416030:intron 30.0%
TTGTTAGCAAAATCAACAAG+AGG + chr3_2:62593993-62594012 None:intergenic 30.0%
ATTCAAGAAACTCAAGAAAC+GGG + chr3_2:62594051-62594070 None:intergenic 30.0%
TGGATATGAAAAATTGTTGC+AGG + chr3_2:62594260-62594279 None:intergenic 30.0%
! ATTTTCTGAATGAGTTGTGT+TGG - chr3_2:62594365-62594384 Msa0416030:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr3_2:62594524-62594543 Msa0416030:intron 30.0%
!! GATTGCTTTTAACGTGTTTT+AGG - chr3_2:62594617-62594636 Msa0416030:intron 30.0%
!! ACAATTTTTCGCACTTTTTG+AGG + chr3_2:62594695-62594714 None:intergenic 30.0%
ATAGAATTCCACAAATCTCA+TGG - chr3_2:62595286-62595305 Msa0416030:intron 30.0%
AATTACCTTTGTCACCATTA+TGG + chr3_2:62595323-62595342 None:intergenic 30.0%
ATGGTGACAAAGGTAATTAA+CGG - chr3_2:62595325-62595344 Msa0416030:intron 30.0%
GAAATATGGTGTAGTTGTTA+TGG - chr3_2:62595432-62595451 Msa0416030:intron 30.0%
TCAATATGATCCAAAACTGA+GGG + chr3_2:62595547-62595566 None:intergenic 30.0%
TTCAATATGATCCAAAACTG+AGG + chr3_2:62595548-62595567 None:intergenic 30.0%
!! TTTTTGTTTGCTGCAATCTT+TGG + chr3_2:62595604-62595623 None:intergenic 30.0%
TGTAAACTTCATCAGATACA+TGG + chr3_2:62595999-62596018 None:intergenic 30.0%
!! AAACTGACTTTTACAATGTG+CGG + chr3_2:62596216-62596235 None:intergenic 30.0%
CTTGTTTATTGGACTATCGT+CGG + chr3_2:62591833-62591852 None:intergenic 35.0%
! ACGATTGTATTGGTCAATGT+TGG + chr3_2:62591989-62592008 None:intergenic 35.0%
! ATGAGGTGTTACGATTGTAT+TGG + chr3_2:62591999-62592018 None:intergenic 35.0%
!! TTACTTTTGTCATGCTCACA+AGG - chr3_2:62592221-62592240 Msa0416030:CDS 35.0%
!!! GGGTTTTTAAGATCAAATGG+GGG - chr3_2:62592593-62592612 Msa0416030:CDS 35.0%
CTAACATTGCCATGGAAAAA+CGG + chr3_2:62592853-62592872 None:intergenic 35.0%
ACGTGAATATGTGACCTAAT+CGG - chr3_2:62592911-62592930 Msa0416030:CDS 35.0%
ATGGTTAATCAATGTGGCAA+AGG - chr3_2:62592969-62592988 Msa0416030:CDS 35.0%
TGGTTAATCAATGTGGCAAA+GGG - chr3_2:62592970-62592989 Msa0416030:CDS 35.0%
AAAATTCACCAACTCCAAAC+AGG + chr3_2:62592999-62593018 None:intergenic 35.0%
TAACTAGGTTTGGCTACTAA+GGG + chr3_2:62593034-62593053 None:intergenic 35.0%
AAGCCATATAGGAAATCTTC+TGG - chr3_2:62593098-62593117 Msa0416030:CDS 35.0%
ATGCCAGAAGATTTCCTATA+TGG + chr3_2:62593104-62593123 None:intergenic 35.0%
! AATCTTCTGGCATTGAAAGA+AGG - chr3_2:62593111-62593130 Msa0416030:intron 35.0%
! CACAGAAAGCTAGTTTATCT+AGG + chr3_2:62593225-62593244 None:intergenic 35.0%
TGGTCATTACAGCTTAACTT+TGG + chr3_2:62593279-62593298 None:intergenic 35.0%
AGCTAGTATCATTTCATAGC+TGG - chr3_2:62593380-62593399 Msa0416030:intron 35.0%
GGAAGTAAAAGCGAATCAAA+AGG + chr3_2:62593436-62593455 None:intergenic 35.0%
AAGAATCATAGACGTAGGAA+CGG + chr3_2:62593457-62593476 None:intergenic 35.0%
! ACAGGAACAAATAACTTGCA+AGG + chr3_2:62593779-62593798 None:intergenic 35.0%
TTCCTGTCATGCCTATTTAT+AGG - chr3_2:62593792-62593811 Msa0416030:intron 35.0%
TTCAAGAAACTCAAGAAACG+GGG + chr3_2:62594050-62594069 None:intergenic 35.0%
TGCAAGATATTTCAGCAGAA+TGG - chr3_2:62594202-62594221 Msa0416030:CDS 35.0%
GCAAGATATTTCAGCAGAAT+GGG - chr3_2:62594203-62594222 Msa0416030:CDS 35.0%
GAGTACTATCTATCCAATGT+GGG + chr3_2:62594505-62594524 None:intergenic 35.0%
! AGAGTACTATCTATCCAATG+TGG + chr3_2:62594506-62594525 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr3_2:62594527-62594546 Msa0416030:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr3_2:62594571-62594590 None:intergenic 35.0%
!! TTTCGCACTTTTTGAGGAAA+GGG + chr3_2:62594689-62594708 None:intergenic 35.0%
!! TTTTCGCACTTTTTGAGGAA+AGG + chr3_2:62594690-62594709 None:intergenic 35.0%
TTCATTGAGAATGACTGACA+CGG + chr3_2:62595023-62595042 None:intergenic 35.0%
AATTCAACATCACCTACAAG+AGG + chr3_2:62595090-62595109 None:intergenic 35.0%
GGTGATGTTGAATTTCTTGA+AGG - chr3_2:62595096-62595115 Msa0416030:intron 35.0%
GAATTTCTTGAAGGACTTTG+AGG - chr3_2:62595105-62595124 Msa0416030:intron 35.0%
TCTCAAGAAACTGAACCATT+GGG - chr3_2:62595154-62595173 Msa0416030:intron 35.0%
TCGCTGTTGAGAACAAAAAA+TGG + chr3_2:62595235-62595254 None:intergenic 35.0%
ACAACTACACCATATTTCGA+TGG + chr3_2:62595430-62595449 None:intergenic 35.0%
TTGTTGCCAACAAACAACTT+GGG + chr3_2:62595496-62595515 None:intergenic 35.0%
TTTGTTGCCAACAAACAACT+TGG + chr3_2:62595497-62595516 None:intergenic 35.0%
TTGGCAACAAAATCAATGCT+GGG - chr3_2:62595506-62595525 Msa0416030:intron 35.0%
CAATATGATCCAAAACTGAG+GGG + chr3_2:62595546-62595565 None:intergenic 35.0%
ACCTCTTTCTCAATAGAAGT+GGG + chr3_2:62595577-62595596 None:intergenic 35.0%
TCTGATGAAGTTTACAGCAA+TGG - chr3_2:62596003-62596022 Msa0416030:intron 35.0%
!!! CTTGTTTTGATTTCCTTGTG+GGG + chr3_2:62596042-62596061 None:intergenic 35.0%
!!! GCTTGTTTTGATTTCCTTGT+GGG + chr3_2:62596043-62596062 None:intergenic 35.0%
!!! TGCTTGTTTTGATTTCCTTG+TGG + chr3_2:62596044-62596063 None:intergenic 35.0%
CTACATGCTAAGAATTTGGA+AGG + chr3_2:62596101-62596120 None:intergenic 35.0%
CACACTACATGCTAAGAATT+TGG + chr3_2:62596105-62596124 None:intergenic 35.0%
!! AACTGACTTTTACAATGTGC+GGG + chr3_2:62596215-62596234 None:intergenic 35.0%
TCAGTGTCTATGTAAAGAGT+TGG - chr3_2:62596277-62596296 Msa0416030:five_prime_UTR 35.0%
CACTGAAAATTACACAGCTT+TGG + chr3_2:62596312-62596331 None:intergenic 35.0%
CAAAATTGGGATTCTTTGAC+AGG - chr3_2:62596365-62596384 Msa0416030:five_prime_UTR 35.0%
CGACGATAGTCCAATAAACA+AGG - chr3_2:62591831-62591850 Msa0416030:three_prime_UTR 40.0%
TGGAATGGTGAAACTGAATG+AGG + chr3_2:62592016-62592035 None:intergenic 40.0%
! TTCTTGACTCGTTCGAGTTA+GGG - chr3_2:62592091-62592110 Msa0416030:three_prime_UTR 40.0%
AACCTGAAGAATTGAGGGTT+TGG + chr3_2:62592131-62592150 None:intergenic 40.0%
TAGGGTATAGCTGAAGCTAA+AGG + chr3_2:62592496-62592515 None:intergenic 40.0%
TAGCTTCAGCTATACCCTAA+TGG - chr3_2:62592497-62592516 Msa0416030:CDS 40.0%
AGCTTCAGCTATACCCTAAT+GGG - chr3_2:62592498-62592517 Msa0416030:CDS 40.0%
AACTAATCTCCGGGTTTGAA+TGG + chr3_2:62592647-62592666 None:intergenic 40.0%
AACTAATCTCCGGGTTTGAA+TGG + chr3_2:62592647-62592666 None:intergenic 40.0%
!!! ACCCGGAGATTAGTTTTTCT+CGG - chr3_2:62592700-62592719 Msa0416030:CDS 40.0%
ACCGAGAAAAACTAATCTCC+GGG + chr3_2:62592704-62592723 None:intergenic 40.0%
CACCGAGAAAAACTAATCTC+CGG + chr3_2:62592705-62592724 None:intergenic 40.0%
ATTCACGTGTACCATAACAG+AGG + chr3_2:62592899-62592918 None:intergenic 40.0%
ACACAAGATTGAGTCCGATT+AGG + chr3_2:62592928-62592947 None:intergenic 40.0%
TTAATCAATGTGGCAAAGGG+TGG - chr3_2:62592973-62592992 Msa0416030:CDS 40.0%
GTAACTAGGTTTGGCTACTA+AGG + chr3_2:62593035-62593054 None:intergenic 40.0%
AGTAGCCAAACCTAGTTACT+TGG - chr3_2:62593036-62593055 Msa0416030:CDS 40.0%
! CATTAGAGTGCCAAGTAACT+AGG + chr3_2:62593049-62593068 None:intergenic 40.0%
!!! GGGTTGGATTAGCTTAGTTT+TGG - chr3_2:62593175-62593194 Msa0416030:intron 40.0%
! GCAGAAGGTTGATCCATTAT+TGG + chr3_2:62593328-62593347 None:intergenic 40.0%
TCTTGTAATGACACGCAGTA+TGG - chr3_2:62593473-62593492 Msa0416030:intron 40.0%
GTCCTATAAATAGGCATGAC+AGG + chr3_2:62593797-62593816 None:intergenic 40.0%
!!! GTTTTGAAGCAGACCAAGAA+AGG + chr3_2:62593865-62593884 None:intergenic 40.0%
CAAAGGTCACATCACAATGA+AGG - chr3_2:62593905-62593924 Msa0416030:intron 40.0%
!! CACAATGAAGGCATTGATTC+TGG - chr3_2:62593917-62593936 Msa0416030:intron 40.0%
!! ATGAAGGCATTGATTCTGGT+TGG - chr3_2:62593921-62593940 Msa0416030:intron 40.0%
GCAAAATCAACAAGAGGCTT+GGG + chr3_2:62593987-62594006 None:intergenic 40.0%
AGCAAAATCAACAAGAGGCT+TGG + chr3_2:62593988-62594007 None:intergenic 40.0%
CTTACCTGATGCAGAATCAT+GGG + chr3_2:62594017-62594036 None:intergenic 40.0%
TTACGATTGCTATGCTACCT+GGG - chr3_2:62594073-62594092 Msa0416030:intron 40.0%
AAACCATCTCTGATTTACCC+AGG + chr3_2:62594093-62594112 None:intergenic 40.0%
! CTGACTGACTCATGATATCA+GGG + chr3_2:62594148-62594167 None:intergenic 40.0%
! TCTGACTGACTCATGATATC+AGG + chr3_2:62594149-62594168 None:intergenic 40.0%
AATCCAGCAAGATTCAACGT+TGG + chr3_2:62594295-62594314 None:intergenic 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr3_2:62594385-62594404 Msa0416030:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG + chr3_2:62594425-62594444 None:intergenic 40.0%
TCTCAAAGCCAACACAATGA+AGG + chr3_2:62594469-62594488 None:intergenic 40.0%
!! TTCATTGTGTTGGCTTTGAG+AGG - chr3_2:62594468-62594487 Msa0416030:intron 40.0%
!! TCATTGTGTTGGCTTTGAGA+GGG - chr3_2:62594469-62594488 Msa0416030:intron 40.0%
!! TTCGCACTTTTTGAGGAAAG+GGG + chr3_2:62594688-62594707 None:intergenic 40.0%
ATCTACTCACAGACAGCAAA+GGG + chr3_2:62594803-62594822 None:intergenic 40.0%
AGGAAAAACACATGAGGTGA+TGG + chr3_2:62594893-62594912 None:intergenic 40.0%
TTTGCAGATAGAGGCTCTTA+AGG - chr3_2:62594923-62594942 Msa0416030:intron 40.0%
ATAGAGGCTCTTAAGGACAT+TGG - chr3_2:62594930-62594949 Msa0416030:intron 40.0%
TCAATTACCAACCAGAGGTA+TGG - chr3_2:62594976-62594995 Msa0416030:intron 40.0%
TTGTGAACACTTCCTCTTGT+AGG - chr3_2:62595075-62595094 Msa0416030:intron 40.0%
CTCTCAAGAAACTGAACCAT+TGG - chr3_2:62595153-62595172 Msa0416030:intron 40.0%
CTCAAGAAACTGAACCATTG+GGG - chr3_2:62595155-62595174 Msa0416030:intron 40.0%
GAATTCCACAAATCTCATGG+AGG - chr3_2:62595289-62595308 Msa0416030:intron 40.0%
AGCTTCCATAATGGTGACAA+AGG - chr3_2:62595315-62595334 Msa0416030:intron 40.0%
! TGTTTTACATCTGCTTGTGC+AGG - chr3_2:62595396-62595415 Msa0416030:intron 40.0%
GTTGTTATGGAAGAGACTAC+CGG - chr3_2:62595445-62595464 Msa0416030:intron 40.0%
TTGTTATGGAAGAGACTACC+GGG - chr3_2:62595446-62595465 Msa0416030:intron 40.0%
AACAAATTTCTCAACCTGCC+CGG + chr3_2:62595467-62595486 None:intergenic 40.0%
GAGAAACCCAAGTTGTTTGT+TGG - chr3_2:62595487-62595506 Msa0416030:intron 40.0%
GTTGGCAACAAAATCAATGC+TGG - chr3_2:62595505-62595524 Msa0416030:intron 40.0%
ACCCACTTCTATTGAGAAAG+AGG - chr3_2:62595573-62595592 Msa0416030:intron 40.0%
CACCTCTTTCTCAATAGAAG+TGG + chr3_2:62595578-62595597 None:intergenic 40.0%
AGACCTGTTATATAGTCCCT+TGG + chr3_2:62595673-62595692 None:intergenic 40.0%
GAAGAAGACTTCTTCCAAGT+TGG - chr3_2:62595717-62595736 Msa0416030:intron 40.0%
TCACATTCCCCAAAATGTGA+GGG + chr3_2:62595750-62595769 None:intergenic 40.0%
ATCACATTCCCCAAAATGTG+AGG + chr3_2:62595751-62595770 None:intergenic 40.0%
ATTGGACCTGATGTTGCAAT+TGG - chr3_2:62595808-62595827 Msa0416030:intron 40.0%
! TCAAGTTGCACTGTAATGAG+AGG - chr3_2:62595865-62595884 Msa0416030:intron 40.0%
GCATTCAACTGTTGGTCAAT+GGG - chr3_2:62595936-62595955 Msa0416030:intron 40.0%
GTGGAGAATATGACTATCCT+TGG - chr3_2:62595964-62595983 Msa0416030:intron 40.0%
ATACATGGACATCTTCTCCA+AGG + chr3_2:62595984-62596003 None:intergenic 40.0%
GATGAAGTTTACAGCAATGG+TGG - chr3_2:62596006-62596025 Msa0416030:intron 40.0%
AATCCAGAGATAGTCATGTG+AGG - chr3_2:62596069-62596088 Msa0416030:five_prime_UTR 40.0%
TCTTAGCATGTAGTGTGTCT+AGG - chr3_2:62596108-62596127 Msa0416030:five_prime_UTR 40.0%
!! ACTGACTTTTACAATGTGCG+GGG + chr3_2:62596214-62596233 None:intergenic 40.0%
GTTTATTGGACTATCGTCGG+TGG + chr3_2:62591830-62591849 None:intergenic 45.0%
CAAGAAGACGAGTTAGAGTG+AGG + chr3_2:62592077-62592096 None:intergenic 45.0%
! CTTCTTGACTCGTTCGAGTT+AGG - chr3_2:62592090-62592109 Msa0416030:three_prime_UTR 45.0%
! GGACAAATGGATCTAGGACT+AGG - chr3_2:62592466-62592485 Msa0416030:CDS 45.0%
GCTTCAGCTATACCCTAATG+GGG - chr3_2:62592499-62592518 Msa0416030:CDS 45.0%
GATCGAACTCAACCCCATTA+GGG + chr3_2:62592514-62592533 None:intergenic 45.0%
TGATCGAACTCAACCCCATT+AGG + chr3_2:62592515-62592534 None:intergenic 45.0%
! CGATCACAGTGGTTAGTTAG+TGG - chr3_2:62592529-62592548 Msa0416030:CDS 45.0%
!!! CGGAGATTAGTTTTTCTCGG+TGG - chr3_2:62592703-62592722 Msa0416030:CDS 45.0%
TGCGTCTACTAACATTGCCA+TGG + chr3_2:62592861-62592880 None:intergenic 45.0%
GAGTGCCAAGTAACTAGGTT+TGG + chr3_2:62593044-62593063 None:intergenic 45.0%
CAAACAAGGATCATGGTACG+TGG + chr3_2:62593299-62593318 None:intergenic 45.0%
AGTGTACAGAGGATGTGACA+CGG + chr3_2:62593694-62593713 None:intergenic 45.0%
TGTTCTCTTCCAGCCTTTCT+TGG - chr3_2:62593849-62593868 Msa0416030:intron 45.0%
!! GATGTGACCTTTGCTTTTCC+AGG + chr3_2:62593898-62593917 None:intergenic 45.0%
!! AAGGCATTGATTCTGGTTGG+AGG - chr3_2:62593924-62593943 Msa0416030:intron 45.0%
!! AGGCATTGATTCTGGTTGGA+GGG - chr3_2:62593925-62593944 Msa0416030:intron 45.0%
! TTGATTCTGGTTGGAGGGTT+TGG - chr3_2:62593930-62593949 Msa0416030:intron 45.0%
CCTTACCTGATGCAGAATCA+TGG + chr3_2:62594018-62594037 None:intergenic 45.0%
CCATGATTCTGCATCAGGTA+AGG - chr3_2:62594015-62594034 Msa0416030:intron 45.0%
CTTACGATTGCTATGCTACC+TGG - chr3_2:62594072-62594091 Msa0416030:intron 45.0%
CTACCTGGGTAAATCAGAGA+TGG - chr3_2:62594087-62594106 Msa0416030:intron 45.0%
! AACGTTGGTTGTTGCCTTGT+TGG + chr3_2:62594280-62594299 None:intergenic 45.0%
CAACCAACGTTGAATCTTGC+TGG - chr3_2:62594289-62594308 Msa0416030:exon 45.0%
GCTGGATTCTGTCAAAACTC+TGG - chr3_2:62594307-62594326 Msa0416030:five_prime_UTR 45.0%
CTGCAATGAAGGCTAACCAA+AGG + chr3_2:62594437-62594456 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr3_2:62594460-62594479 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr3_2:62594458-62594477 Msa0416030:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr3_2:62594463-62594482 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr3_2:62594562-62594581 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr3_2:62594559-62594578 Msa0416030:intron 45.0%
!! TCGCACTTTTTGAGGAAAGG+GGG + chr3_2:62594687-62594706 None:intergenic 45.0%
TTGTTCTTGCTTGCGTGAGA+AGG - chr3_2:62594711-62594730 Msa0416030:intron 45.0%
CATCTACTCACAGACAGCAA+AGG + chr3_2:62594804-62594823 None:intergenic 45.0%
TTGCTGTCTGTGAGTAGATG+CGG - chr3_2:62594804-62594823 Msa0416030:intron 45.0%
GGACATTGGAGTTACTGAAG+TGG - chr3_2:62594944-62594963 Msa0416030:intron 45.0%
GGCTATCAATTACCAACCAG+AGG - chr3_2:62594971-62594990 Msa0416030:intron 45.0%
TGACACGGTTAGGAAAAGAG+AGG + chr3_2:62595008-62595027 None:intergenic 45.0%
TGAGAATGACTGACACGGTT+AGG + chr3_2:62595018-62595037 None:intergenic 45.0%
TTATCTCTGGCAAGAGCCAA+GGG + chr3_2:62595190-62595209 None:intergenic 45.0%
GCCAGAGATAAGCTGATTGA+TGG - chr3_2:62595199-62595218 Msa0416030:intron 45.0%
GCCATCAATCAGCTTATCTC+TGG + chr3_2:62595203-62595222 None:intergenic 45.0%
CTTCTCCTCCATGAGATTTG+TGG + chr3_2:62595297-62595316 None:intergenic 45.0%
TGGAGGAGAAGCTTCCATAA+TGG - chr3_2:62595306-62595325 Msa0416030:intron 45.0%
GTTGACGAGCCATCGAAATA+TGG - chr3_2:62595418-62595437 Msa0416030:intron 45.0%
CCAAAACTGAGGGGTTCAAT+AGG + chr3_2:62595537-62595556 None:intergenic 45.0%
! CCTATTGAACCCCTCAGTTT+TGG - chr3_2:62595534-62595553 Msa0416030:intron 45.0%
! CTATATGCAATGGTTCTGCC+TGG - chr3_2:62595625-62595644 Msa0416030:intron 45.0%
CAGCCAAGGGACTATATAAC+AGG - chr3_2:62595667-62595686 Msa0416030:intron 45.0%
GTGCATGAGACAGCCAAAAT+TGG - chr3_2:62595772-62595791 Msa0416030:intron 45.0%
GTACTATTGAGTCAGGTGTC+AGG - chr3_2:62595839-62595858 Msa0416030:intron 45.0%
GCACTGTAATGAGAGGAGTT+CGG - chr3_2:62595872-62595891 Msa0416030:intron 45.0%
TGCATATCCAGCAGCATCAT+CGG - chr3_2:62595910-62595929 Msa0416030:intron 45.0%
GGCATTCAACTGTTGGTCAA+TGG - chr3_2:62595935-62595954 Msa0416030:intron 45.0%
! AGTTTACAGCAATGGTGGTG+TGG - chr3_2:62596011-62596030 Msa0416030:intron 45.0%
TAGCCTCACATGACTATCTC+TGG + chr3_2:62596075-62596094 None:intergenic 45.0%
TAGCATGTAGTGTGTCTAGG+AGG - chr3_2:62596111-62596130 Msa0416030:five_prime_UTR 45.0%
! ACTTTTACAATGTGCGGGGA+AGG + chr3_2:62596210-62596229 None:intergenic 45.0%
CGCCAAACCCTCAATTCTTC+AGG - chr3_2:62592126-62592145 Msa0416030:CDS 50.0%
GCCACTACTCCATTCAAACC+CGG - chr3_2:62592635-62592654 Msa0416030:CDS 50.0%
TCCGGGTTTGAATGGAGTAG+TGG + chr3_2:62592639-62592658 None:intergenic 50.0%
! TAGTTTTTCTCGGTGGCGTG+TGG - chr3_2:62592710-62592729 Msa0416030:CDS 50.0%
! AGTTTTTCTCGGTGGCGTGT+GGG - chr3_2:62592711-62592730 Msa0416030:CDS 50.0%
TCCTAGCTCGACCTCTGTTA+TGG - chr3_2:62592885-62592904 Msa0416030:CDS 50.0%
ACCATAACAGAGGTCGAGCT+AGG + chr3_2:62592889-62592908 None:intergenic 50.0%
TGACAAGCAGAAGCTGAGTG+CGG - chr3_2:62593153-62593172 Msa0416030:intron 50.0%
CTGAGCTGACAAGTGTACAG+AGG + chr3_2:62593705-62593724 None:intergenic 50.0%
CTCTGTACACTTGTCAGCTC+AGG - chr3_2:62593703-62593722 Msa0416030:intron 50.0%
TGAAGCAGACCAAGAAAGGC+TGG + chr3_2:62593861-62593880 None:intergenic 50.0%
! TGGTTGGAGGGTTTGGAACA+AGG - chr3_2:62593937-62593956 Msa0416030:intron 50.0%
! GAGGGTTTGGAACAAGGTTG+AGG - chr3_2:62593943-62593962 Msa0416030:intron 50.0%
TTGGGAACGCTGAGTGTCAA+TGG + chr3_2:62593969-62593988 None:intergenic 50.0%
CAAGCCCATGATTCTGCATC+AGG - chr3_2:62594010-62594029 Msa0416030:intron 50.0%
GTCGCAATTTAGGCGACTAG+GGG + chr3_2:62594415-62594434 None:intergenic 50.0%
GGTCGCAATTTAGGCGACTA+GGG + chr3_2:62594416-62594435 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG + chr3_2:62594417-62594436 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG - chr3_2:62594418-62594437 Msa0416030:intron 50.0%
!! TTGTGTTGGCTTTGAGAGGG+TGG - chr3_2:62594472-62594491 Msa0416030:intron 50.0%
! GGGTGGATTTAGTCCCACAT+TGG - chr3_2:62594489-62594508 Msa0416030:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr3_2:62594557-62594576 None:intergenic 50.0%
!! GACAGCAAAGGGATGATGGA+AGG + chr3_2:62594792-62594811 None:intergenic 50.0%
CACAGACAGCAAAGGGATGA+TGG + chr3_2:62594796-62594815 None:intergenic 50.0%
TGCTGTCTGTGAGTAGATGC+GGG - chr3_2:62594805-62594824 Msa0416030:intron 50.0%
TGGAGTTACTGAAGTGGTGC+TGG - chr3_2:62594950-62594969 Msa0416030:intron 50.0%
GCACAATCCATACCTCTGGT+TGG + chr3_2:62594986-62595005 None:intergenic 50.0%
! AGAGGCACAATCCATACCTC+TGG + chr3_2:62594990-62595009 None:intergenic 50.0%
CTTATCTCTGGCAAGAGCCA+AGG + chr3_2:62595191-62595210 None:intergenic 50.0%
! CAATGGTTCTGCCTGGATTC+TGG - chr3_2:62595632-62595651 Msa0416030:intron 50.0%
CCAATGTCCATCCAGAATCC+AGG + chr3_2:62595646-62595665 None:intergenic 50.0%
CCTGGATTCTGGATGGACAT+TGG - chr3_2:62595643-62595662 Msa0416030:intron 50.0%
GATGGACATTGGACAGCCAA+GGG - chr3_2:62595654-62595673 Msa0416030:intron 50.0%
! AACAGGTCTGAGACTCTACC+TGG - chr3_2:62595684-62595703 Msa0416030:intron 50.0%
TCTTCTTCCTGAGTGAGTCC+AGG + chr3_2:62595705-62595724 None:intergenic 50.0%
! ACTTCTTCCAAGTTGGCCAG+TGG - chr3_2:62595724-62595743 Msa0416030:intron 50.0%
TGAGACAGCCAAAATTGGCG+AGG - chr3_2:62595777-62595796 Msa0416030:intron 50.0%
GAGACAGCCAAAATTGGCGA+GGG - chr3_2:62595778-62595797 Msa0416030:intron 50.0%
! GAGACATCCCTCGCCAATTT+TGG + chr3_2:62595788-62595807 None:intergenic 50.0%
ATTGGCGAGGGATGTCTCAT+TGG - chr3_2:62595790-62595809 Msa0416030:intron 50.0%
CCAGGACCAATTGCAACATC+AGG + chr3_2:62595817-62595836 None:intergenic 50.0%
CCTGATGTTGCAATTGGTCC+TGG - chr3_2:62595814-62595833 Msa0416030:intron 50.0%
CCTGACTCAATAGTACAGCC+AGG + chr3_2:62595835-62595854 None:intergenic 50.0%
CCTGGCTGTACTATTGAGTC+AGG - chr3_2:62595832-62595851 Msa0416030:intron 50.0%
GCATATCCAGCAGCATCATC+GGG - chr3_2:62595911-62595930 Msa0416030:intron 50.0%
ATCGGGTGGCATTCAACTGT+TGG - chr3_2:62595928-62595947 Msa0416030:intron 50.0%
TTACAATGTGCGGGGAAGGA+GGG + chr3_2:62596206-62596225 None:intergenic 50.0%
TTTACAATGTGCGGGGAAGG+AGG + chr3_2:62596207-62596226 None:intergenic 50.0%
GGGGTTGAGTTCGATCACAG+TGG - chr3_2:62592518-62592537 Msa0416030:CDS 55.0%
GGCGTGTGACCATTCAAACC+CGG - chr3_2:62592683-62592702 Msa0416030:CDS 55.0%
! AAGGGTGGCCTGTTTGGAGT+TGG - chr3_2:62592988-62593007 Msa0416030:CDS 55.0%
GACAAGCAGAAGCTGAGTGC+GGG - chr3_2:62593154-62593173 Msa0416030:intron 55.0%
ACAAGCAGAAGCTGAGTGCG+GGG - chr3_2:62593155-62593174 Msa0416030:intron 55.0%
CTAGGGGCAGACCGCAATTA+AGG + chr3_2:62594399-62594418 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr3_2:62594448-62594467 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr3_2:62594549-62594568 Msa0416030:intron 55.0%
ACTGAACCATTGGGGACTGC+AGG - chr3_2:62595163-62595182 Msa0416030:intron 55.0%
TATGGAAGAGACTACCGGGC+AGG - chr3_2:62595450-62595469 Msa0416030:intron 55.0%
GGTTCTGCCTGGATTCTGGA+TGG - chr3_2:62595636-62595655 Msa0416030:intron 55.0%
GGATGGACATTGGACAGCCA+AGG - chr3_2:62595653-62595672 Msa0416030:intron 55.0%
GACTCTACCTGGACTCACTC+AGG - chr3_2:62595695-62595714 Msa0416030:intron 55.0%
! GCCAGTGGCCCTCACATTTT+GGG - chr3_2:62595739-62595758 Msa0416030:intron 55.0%
! CCAGTGGCCCTCACATTTTG+GGG - chr3_2:62595740-62595759 Msa0416030:intron 55.0%
TATCCAGCAGCATCATCGGG+TGG - chr3_2:62595914-62595933 Msa0416030:intron 55.0%
!! TGGTGTGGTTTTGCCCCACA+AGG - chr3_2:62596026-62596045 Msa0416030:intron 55.0%
GTGGCAAAGGGTGGCCTGTT+TGG - chr3_2:62592982-62593001 Msa0416030:CDS 60.0%
GGGGCAGACCGCAATTAAGG+CGG + chr3_2:62594396-62594415 None:intergenic 60.0%
AAGGGACCTGCAGTCCCCAA+TGG + chr3_2:62595172-62595191 None:intergenic 60.0%
ATTGGGGACTGCAGGTCCCT+TGG - chr3_2:62595171-62595190 Msa0416030:intron 60.0%
! GGCCAGTGGCCCTCACATTT+TGG - chr3_2:62595738-62595757 Msa0416030:intron 60.0%
CCCCAAAATGTGAGGGCCAC+TGG + chr3_2:62595743-62595762 None:intergenic 60.0%
ATGCCACCCGATGATGCTGC+TGG + chr3_2:62595920-62595939 None:intergenic 60.0%
! TGTTGGTCAATGGGCTCGCG+TGG - chr3_2:62595945-62595964 Msa0416030:intron 60.0%
GCAGAAGCTGAGTGCGGGGT+TGG - chr3_2:62593159-62593178 Msa0416030:intron 65.0%
GTGAGGGCCACTGGCCAACT+TGG + chr3_2:62595734-62595753 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 62591813 62596402 62591813 ID=Msa0416030;Name=Msa0416030
chr3_2 mRNA 62591813 62596402 62591813 ID=Msa0416030-mRNA-1;Parent=Msa0416030;Name=Msa0416030-mRNA-1;_AED=0.04;_eAED=0.04;_QI=394|1|1|1|0.75|0.6|5|313|361
chr3_2 exon 62591813 62592797 62591813 ID=Msa0416030-mRNA-1:exon:13558;Parent=Msa0416030-mRNA-1
chr3_2 exon 62592879 62593118 62592879 ID=Msa0416030-mRNA-1:exon:13557;Parent=Msa0416030-mRNA-1
chr3_2 exon 62593223 62593285 62593223 ID=Msa0416030-mRNA-1:exon:13556;Parent=Msa0416030-mRNA-1
chr3_2 exon 62594184 62594353 62594184 ID=Msa0416030-mRNA-1:exon:13555;Parent=Msa0416030-mRNA-1
chr3_2 exon 62596068 62596402 62596068 ID=Msa0416030-mRNA-1:exon:13554;Parent=Msa0416030-mRNA-1
chr3_2 five_prime_UTR 62596068 62596402 62596068 ID=Msa0416030-mRNA-1:five_prime_utr;Parent=Msa0416030-mRNA-1
chr3_2 five_prime_UTR 62594295 62594353 62594295 ID=Msa0416030-mRNA-1:five_prime_utr;Parent=Msa0416030-mRNA-1
chr3_2 CDS 62594184 62594294 62594184 ID=Msa0416030-mRNA-1:cds;Parent=Msa0416030-mRNA-1
chr3_2 CDS 62593223 62593285 62593223 ID=Msa0416030-mRNA-1:cds;Parent=Msa0416030-mRNA-1
chr3_2 CDS 62592879 62593118 62592879 ID=Msa0416030-mRNA-1:cds;Parent=Msa0416030-mRNA-1
chr3_2 CDS 62592126 62592797 62592126 ID=Msa0416030-mRNA-1:cds;Parent=Msa0416030-mRNA-1
chr3_2 three_prime_UTR 62591813 62592125 62591813 ID=Msa0416030-mRNA-1:three_prime_utr;Parent=Msa0416030-mRNA-1
Gene Sequence

>Msa0416030

ATGAAGGCATTGATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGCGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGAAGTGGTGCTGGCTATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGACTTTGAGGAAAAGCTCGACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGGACTGCAGGTCCCTTGGCTCTTGCCAGAGATAAGCTGATTGATGGCTCTAGTGAGCCATTTTTTGTTCTCAACAGCGATGTTATCAGTGAGTATCCACTCAAAGAAATGATAGAATTCCACAAATCTCATGGAGGAGAAGCTTCCATAATGGTGACAAAGGTTGACGAGCCATCGAAATATGGTGTAGTTGTTATGGAAGAGACTACCGGGCAGGTTGAGAAATTTGTTGAGAAACCCAAGTTGTTTGTTGGCAACAAAATCAATGCTGGGATCTACCTATTGAACCCCTCAGTTTTGGATCATATTGAACTGAGACCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCAGCAAACAAAAAGCTATATGCAATGGTTCTGCCTGGATTCTGGATGGACATTGGACAGCCAAGGGACTATATAACAGGTCTGAGACTCTACCTGGACTCACTCAGGAAGAAGACTTCTTCCAAGTTGGCCAGTGGCCCTCACATTTTGGGGAATGTGATTGTGCATGAGACAGCCAAAATTGGCGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTACTATTGAGTCAGGTGTCAGGCTTTCAAGTTGCACTGTAATGAGAGGAGTTCGGATTAAGAAGCATGCTTGCATATCCAGCAGCATCATCGGGTGGCATTCAACTGTTGGTCAATGGGCTCGCGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTATCTGATGAAGTTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAAATCAAAACAAGCATTCTGAATCCAGAGATAGTCATGTGA
Protein sequence

>Msa0416030

MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVMLNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSSEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDHIELRPTSIEKEVFPKIAANKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKTSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSSCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM*