Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315500 | XP_003627447.1 | 97.159 | 352 | 6 | 2 | 1 | 352 | 1 | 348 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315500 | G7L969 | 97.159 | 352 | 6 | 2 | 1 | 352 | 1 | 348 | 0.0 | 700 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1315500 | 0.827482 | 1.526845e-54 | -8.615850e-47 |
| Msa0039750 | Msa1315500 | 0.814467 | 1.517999e-51 | -8.615850e-47 |
| Msa0041790 | Msa1315500 | 0.824759 | 6.781001e-54 | -8.615850e-47 |
| Msa0050530 | Msa1315500 | 0.834767 | 2.477161e-56 | -8.615850e-47 |
| Msa0100600 | Msa1315500 | 0.852423 | 4.663077e-61 | -8.615850e-47 |
| Msa0100890 | Msa1315500 | 0.825524 | 4.473215e-54 | -8.615850e-47 |
| Msa0618840 | Msa1315500 | 0.822505 | 2.284831e-53 | -8.615850e-47 |
| Msa0618990 | Msa1315500 | 0.839645 | 1.400226e-57 | -8.615850e-47 |
| Msa0625620 | Msa1315500 | 0.812336 | 4.463515e-51 | -8.615850e-47 |
| Msa0630440 | Msa1315500 | 0.823005 | 1.748527e-53 | -8.615850e-47 |
| Msa0640800 | Msa1315500 | 0.823530 | 1.318189e-53 | -8.615850e-47 |
| Msa0646260 | Msa1315500 | 0.805683 | 1.185614e-49 | -8.615850e-47 |
| Msa0661480 | Msa1315500 | 0.805534 | 1.274457e-49 | -8.615850e-47 |
| Msa0663290 | Msa1315500 | 0.809687 | 1.672969e-50 | -8.615850e-47 |
| Msa0664070 | Msa1315500 | 0.801616 | 8.279757e-49 | -8.615850e-47 |
| Msa0688620 | Msa1315500 | 0.800474 | 1.417297e-48 | -8.615850e-47 |
| Msa0689830 | Msa1315500 | 0.837005 | 6.708647e-57 | -8.615850e-47 |
| Msa0704690 | Msa1315500 | 0.800744 | 1.248259e-48 | -8.615850e-47 |
| Msa0707260 | Msa1315500 | 0.837984 | 3.764256e-57 | -8.615850e-47 |
| Msa0708980 | Msa1315500 | 0.820494 | 6.657557e-53 | -8.615850e-47 |
| Msa0717900 | Msa1315500 | 0.817838 | 2.679413e-52 | -8.615850e-47 |
| Msa0720280 | Msa1315500 | 0.814834 | 1.258979e-51 | -8.615850e-47 |
| Msa0737020 | Msa1315500 | 0.800285 | 1.548631e-48 | -8.615850e-47 |
| Msa0746650 | Msa1315500 | 0.818321 | 2.082972e-52 | -8.615850e-47 |
| Msa0750520 | Msa1315500 | 0.804625 | 1.974635e-49 | -8.615850e-47 |
| Msa0751720 | Msa1315500 | 0.826931 | 2.069315e-54 | -8.615850e-47 |
| Msa0780820 | Msa1315500 | 0.819617 | 1.057249e-52 | -8.615850e-47 |
| Msa0803140 | Msa1315500 | 0.816865 | 4.436274e-52 | -8.615850e-47 |
| Msa0816080 | Msa1315500 | 0.802621 | 5.144171e-49 | -8.615850e-47 |
| Msa0816230 | Msa1315500 | 0.819958 | 8.833496e-53 | -8.615850e-47 |
| Msa0827420 | Msa1315500 | 0.813204 | 2.881776e-51 | -8.615850e-47 |
| Msa0831820 | Msa1315500 | 0.810708 | 1.007745e-50 | -8.615850e-47 |
| Msa0837680 | Msa1315500 | 0.825770 | 3.910937e-54 | -8.615850e-47 |
| Msa0125590 | Msa1315500 | 0.814355 | 1.606874e-51 | -8.615850e-47 |
| Msa0168380 | Msa1315500 | 0.843791 | 1.127758e-58 | -8.615850e-47 |
| Msa0170070 | Msa1315500 | 0.812994 | 3.203019e-51 | -8.615850e-47 |
| Msa0172590 | Msa1315500 | 0.804820 | 1.798212e-49 | -8.615850e-47 |
| Msa0173250 | Msa1315500 | 0.802990 | 4.315400e-49 | -8.615850e-47 |
| Msa0192050 | Msa1315500 | 0.823204 | 1.570930e-53 | -8.615850e-47 |
| Msa0204970 | Msa1315500 | 0.826727 | 2.314936e-54 | -8.615850e-47 |
| Msa1234460 | Msa1315500 | 0.842204 | 2.983164e-58 | -8.615850e-47 |
| Msa1277110 | Msa1315500 | 0.958768 | 1.037830e-116 | -8.615850e-47 |
| Msa1294280 | Msa1315500 | 0.805754 | 1.146036e-49 | -8.615850e-47 |
| Msa1294790 | Msa1315500 | 0.809327 | 1.998806e-50 | -8.615850e-47 |
| Msa1315500 | Msa1328870 | 0.810605 | 1.060598e-50 | -8.615850e-47 |
| Msa1315500 | Msa1334560 | 0.800294 | 1.541915e-48 | -8.615850e-47 |
| Msa1315500 | Msa1339230 | 0.821021 | 5.038367e-53 | -8.615850e-47 |
| Msa1315500 | Msa1347390 | 0.816516 | 5.310839e-52 | -8.615850e-47 |
| Msa1315500 | Msa1372030 | 0.805701 | 1.175864e-49 | -8.615850e-47 |
| Msa1315500 | Msa1379940 | 0.800576 | 1.350857e-48 | -8.615850e-47 |
| Msa1315500 | Msa1387500 | 0.817550 | 3.111079e-52 | -8.615850e-47 |
| Msa1315500 | Msa1389820 | 0.811741 | 6.016731e-51 | -8.615850e-47 |
| Msa1315500 | Msa1393560 | 0.817886 | 2.613403e-52 | -8.615850e-47 |
| Msa1315500 | Msa1399190 | 0.835197 | 1.930839e-56 | -8.615850e-47 |
| Msa1315500 | Msa1420830 | 0.832953 | 7.042624e-56 | -8.615850e-47 |
| Msa1315500 | Msa1426320 | 0.835509 | 1.610355e-56 | -8.615850e-47 |
| Msa1315500 | Msa1428690 | 0.801199 | 1.007876e-48 | -8.615850e-47 |
| Msa1315500 | Msa1435100 | 0.814876 | 1.232008e-51 | -8.615850e-47 |
| Msa1315500 | Msa1439730 | 0.814267 | 1.681118e-51 | -8.615850e-47 |
| Msa1315500 | Msa1444930 | 0.802684 | 4.991000e-49 | -8.615850e-47 |
| Msa1315500 | Msa1466820 | 0.808072 | 3.706189e-50 | -8.615850e-47 |
| Msa0373170 | Msa1315500 | 0.820790 | 5.692607e-53 | -8.615850e-47 |
| Msa0382230 | Msa1315500 | 0.816934 | 4.281175e-52 | -8.615850e-47 |
| Msa0388250 | Msa1315500 | 0.844859 | 5.822112e-59 | -8.615850e-47 |
| Msa0388620 | Msa1315500 | 0.814637 | 1.391807e-51 | -8.615850e-47 |
| Msa0402770 | Msa1315500 | 0.805159 | 1.526965e-49 | -8.615850e-47 |
| Msa0404770 | Msa1315500 | 0.818218 | 2.198455e-52 | -8.615850e-47 |
| Msa0416030 | Msa1315500 | 0.801919 | 7.174198e-49 | -8.615850e-47 |
| Msa0416210 | Msa1315500 | 0.844534 | 7.123991e-59 | -8.615850e-47 |
| Msa0421750 | Msa1315500 | 0.816210 | 6.219157e-52 | -8.615850e-47 |
| Msa0433630 | Msa1315500 | 0.876879 | 9.826944e-69 | -8.615850e-47 |
| Msa0435280 | Msa1315500 | 0.804382 | 2.219410e-49 | -8.615850e-47 |
| Msa0436100 | Msa1315500 | 0.801110 | 1.050964e-48 | -8.615850e-47 |
| Msa0467690 | Msa1315500 | 0.823273 | 1.513396e-53 | -8.615850e-47 |
| Msa0477480 | Msa1315500 | 0.854856 | 9.311744e-62 | -8.615850e-47 |
| Msa0982730 | Msa1315500 | 0.828917 | 6.885924e-55 | -8.615850e-47 |
| Msa1000780 | Msa1315500 | 0.838111 | 3.490980e-57 | -8.615850e-47 |
| Msa1008260 | Msa1315500 | 0.810606 | 1.060305e-50 | -8.615850e-47 |
| Msa1008850 | Msa1315500 | 0.814409 | 1.563765e-51 | -8.615850e-47 |
| Msa1025200 | Msa1315500 | 0.803407 | 3.537411e-49 | -8.615850e-47 |
| Msa1041370 | Msa1315500 | 0.809962 | 1.459916e-50 | -8.615850e-47 |
| Msa1049910 | Msa1315500 | 0.806428 | 8.266255e-50 | -8.615850e-47 |
| Msa1050260 | Msa1315500 | 0.828098 | 1.085716e-54 | -8.615850e-47 |
| Msa1071410 | Msa1315500 | 0.808020 | 3.802139e-50 | -8.615850e-47 |
| Msa1081270 | Msa1315500 | 0.815438 | 9.244574e-52 | -8.615850e-47 |
| Msa0249870 | Msa1315500 | 0.806680 | 7.311953e-50 | -8.615850e-47 |
| Msa0281540 | Msa1315500 | 0.818592 | 1.808820e-52 | -8.615850e-47 |
| Msa0288400 | Msa1315500 | 0.828006 | 1.142506e-54 | -8.615850e-47 |
| Msa0307430 | Msa1315500 | 0.801131 | 1.040644e-48 | -8.615850e-47 |
| Msa0312740 | Msa1315500 | 0.802864 | 4.582810e-49 | -8.615850e-47 |
| Msa0320580 | Msa1315500 | 0.808963 | 2.392597e-50 | -8.615850e-47 |
| Msa0342220 | Msa1315500 | 0.828647 | 8.002728e-55 | -8.615850e-47 |
| Msa0344110 | Msa1315500 | 0.813774 | 2.159113e-51 | -8.615850e-47 |
| Msa1124210 | Msa1315500 | 0.806257 | 8.981986e-50 | -8.615850e-47 |
| Msa1163180 | Msa1315500 | 0.807471 | 4.974716e-50 | -8.615850e-47 |
| Msa1206040 | Msa1315500 | 0.806086 | 9.758374e-50 | -8.615850e-47 |
| Msa1219770 | Msa1315500 | 0.815738 | 7.924629e-52 | -8.615850e-47 |
| Msa1220580 | Msa1315500 | 0.810014 | 1.422415e-50 | -8.615850e-47 |
| Msa0506750 | Msa1315500 | 0.822550 | 2.231115e-53 | -8.615850e-47 |
| Msa0513640 | Msa1315500 | 0.815535 | 8.798408e-52 | -8.615850e-47 |
| Msa0514020 | Msa1315500 | 0.832187 | 1.090772e-55 | -8.615850e-47 |
| Msa0520680 | Msa1315500 | 0.812435 | 4.246211e-51 | -8.615850e-47 |
| Msa0521510 | Msa1315500 | 0.879203 | 1.509280e-69 | -8.615850e-47 |
| Msa0521530 | Msa1315500 | 0.864600 | 1.082394e-64 | -8.615850e-47 |
| Msa0527850 | Msa1315500 | 0.813732 | 2.205066e-51 | -8.615850e-47 |
| Msa0528310 | Msa1315500 | 0.806502 | 7.972171e-50 | -8.615850e-47 |
| Msa0541880 | Msa1315500 | 0.809239 | 2.087193e-50 | -8.615850e-47 |
| Msa0541940 | Msa1315500 | 0.800308 | 1.531671e-48 | -8.615850e-47 |
| Msa0544410 | Msa1315500 | 0.821044 | 4.976851e-53 | -8.615850e-47 |
| Msa0544430 | Msa1315500 | 0.807948 | 3.937897e-50 | -8.615850e-47 |
| Msa0549870 | Msa1315500 | 0.809246 | 2.080183e-50 | -8.615850e-47 |
| Msa0554300 | Msa1315500 | 0.800224 | 1.593271e-48 | -8.615850e-47 |
| Msa0572830 | Msa1315500 | 0.851317 | 9.600719e-61 | -8.615850e-47 |
| Msa0582460 | Msa1315500 | 0.811539 | 6.657056e-51 | -8.615850e-47 |
| Msa0586200 | Msa1315500 | 0.811571 | 6.550017e-51 | -8.615850e-47 |
| Msa0846900 | Msa1315500 | 0.830839 | 2.343126e-55 | -8.615850e-47 |
| Msa0857260 | Msa1315500 | 0.804835 | 1.784640e-49 | -8.615850e-47 |
| Msa0861440 | Msa1315500 | 0.817949 | 2.529485e-52 | -8.615850e-47 |
| Msa0900090 | Msa1315500 | 0.816409 | 5.612441e-52 | -8.615850e-47 |
| Msa0926310 | Msa1315500 | 0.838028 | 3.667558e-57 | -8.615850e-47 |
| Msa0945900 | Msa1315500 | 0.805945 | 1.044612e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315500 | MtrunA17_Chr8g0345191 | 97.159 | 352 | 6 | 2 | 1 | 352 | 1 | 348 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315500 | AT1G53860.1 | 40.741 | 351 | 111 | 19 | 16 | 341 | 32 | 310 | 1.77e-52 | 181 |
| Msa1315500 | AT1G53860.2 | 43.310 | 284 | 85 | 15 | 64 | 341 | 29 | 242 | 2.25e-47 | 166 |
Find 63 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTCTGCTTTAGCATTT+TGG | 0.143930 | 8_4:-14980341 | None:intergenic |
| TCTTCATCAACTTCTCTTCT+AGG | 0.148288 | 8_4:-14981465 | None:intergenic |
| CAGAACAAACACATGTTTAA+TGG | 0.190169 | 8_4:-14981654 | None:intergenic |
| TCTTCACTTGAGCTCCAATT+TGG | 0.237659 | 8_4:-14979790 | None:intergenic |
| TTAGAAGGAAAACTCTTTCT+TGG | 0.240297 | 8_4:-14978231 | None:intergenic |
| GGTTCTGAATACCTGAATTT+TGG | 0.242708 | 8_4:-14979454 | None:intergenic |
| CTAGGTTTGATCTCATCTTT+TGG | 0.242960 | 8_4:-14981447 | None:intergenic |
| TCAAAGTTCTTCTTCAAGTT+TGG | 0.247781 | 8_4:+14978464 | Msa1315500:CDS |
| GCTGTTTCATCTTCAGAATC+TGG | 0.297830 | 8_4:+14978336 | Msa1315500:CDS |
| TCTTCTTCTTCTAGCATTGT+TGG | 0.302752 | 8_4:+14978198 | Msa1315500:CDS |
| TGGAACAACAAAGTATGATT+TGG | 0.316654 | 8_4:+14979762 | Msa1315500:CDS |
| ATGATTTGGTCGCACCAAAT+TGG | 0.331096 | 8_4:+14979776 | Msa1315500:CDS |
| CCAACAGACATAGTACTAAA+AGG | 0.331635 | 8_4:+14978531 | Msa1315500:CDS |
| TCAGCATCATCCCATTTAGA+AGG | 0.351555 | 8_4:-14978246 | None:intergenic |
| GGAACAAGACAATGTGATAA+TGG | 0.370159 | 8_4:+14978357 | Msa1315500:CDS |
| TAATGGCTTTAAGCAGAAAA+TGG | 0.377630 | 8_4:+14978374 | Msa1315500:CDS |
| TCTGCATTGGTGTTTGAAAC+TGG | 0.400700 | 8_4:-14978078 | None:intergenic |
| ACAACAACACTTAGAGCAAA+TGG | 0.425278 | 8_4:+14981537 | Msa1315500:three_prime_UTR |
| AGTGGTCTACCAGGTGTAGA+AGG | 0.428314 | 8_4:-14978153 | None:intergenic |
| CTCAAGTGAAGAGGAGGAAA+AGG | 0.432830 | 8_4:+14979801 | Msa1315500:CDS |
| TCAATGAAATCATCAACAAA+AGG | 0.436808 | 8_4:-14978003 | None:intergenic |
| TGCTAGTAGGTCAGGACCAT+TGG | 0.447997 | 8_4:+14979660 | Msa1315500:CDS |
| ACCTACTAGCAGGAGTGTTA+TGG | 0.458860 | 8_4:-14979648 | None:intergenic |
| AACAGTGTTGGAGCTTTCCA+TGG | 0.468711 | 8_4:+14978495 | Msa1315500:CDS |
| GGCACAGAAATGACTCCATT+AGG | 0.474794 | 8_4:+14979571 | Msa1315500:CDS |
| TAGAAGAGAAGTTGATGAAG+AGG | 0.474993 | 8_4:+14981467 | Msa1315500:CDS |
| GTTTAATGGTTGTTATTGCA+AGG | 0.478802 | 8_4:-14981640 | None:intergenic |
| AAGGAAAACTCTTTCTTGGA+AGG | 0.487386 | 8_4:-14978227 | None:intergenic |
| AACACTCCTGCTAGTAGGTC+AGG | 0.488893 | 8_4:+14979652 | Msa1315500:CDS |
| GAAGTGGTGGAACTTCCTAA+TGG | 0.497914 | 8_4:-14979586 | None:intergenic |
| TTCACAGGAAAGCTGAGGAT+TGG | 0.520048 | 8_4:+14981500 | Msa1315500:exon |
| AAGCTGAAAAGTGGTCTACC+AGG | 0.520352 | 8_4:-14978162 | None:intergenic |
| CAATGAAATCATCAACAAAA+GGG | 0.520852 | 8_4:-14978002 | None:intergenic |
| TATTCAGAACCAACAAAAGA+AGG | 0.526385 | 8_4:+14979466 | Msa1315500:CDS |
| TTTAGTACTATGTCTGTTGG+TGG | 0.529642 | 8_4:-14978528 | None:intergenic |
| GAAGAACTGAAGCTGAAAAG+TGG | 0.537400 | 8_4:-14978171 | None:intergenic |
| AGAGGATGTCAATGGTTCAC+AGG | 0.541745 | 8_4:+14981485 | Msa1315500:CDS |
| GAAGTTAAACACAAAGATGT+TGG | 0.542067 | 8_4:+14979550 | Msa1315500:CDS |
| CTTTAAGCAGAAAATGGATG+AGG | 0.543055 | 8_4:+14978380 | Msa1315500:CDS |
| CTAGAAGCTCCTTCTACACC+TGG | 0.550547 | 8_4:+14978144 | Msa1315500:CDS |
| TTTAATGGTTGTTATTGCAA+GGG | 0.558838 | 8_4:-14981639 | None:intergenic |
| TTGGACCACAATAACAGTGT+TGG | 0.565677 | 8_4:+14978483 | Msa1315500:CDS |
| AAGCTCCAACACTGTTATTG+TGG | 0.573263 | 8_4:-14978488 | None:intergenic |
| GCAGGAGTGTTATGGCGCGC+AGG | 0.575784 | 8_4:-14979640 | None:intergenic |
| GTTGATGAAGAGGATGTCAA+TGG | 0.576855 | 8_4:+14981477 | Msa1315500:CDS |
| AATGGTCCTGACCTACTAGC+AGG | 0.581765 | 8_4:-14979658 | None:intergenic |
| ACAGTGTTGGAGCTTTCCAT+GGG | 0.592400 | 8_4:+14978496 | Msa1315500:CDS |
| ATTCAGAAATCAAGCTTGTG+AGG | 0.593668 | 8_4:+14979495 | Msa1315500:CDS |
| TTATCTAACATCGATAGCAA+TGG | 0.594700 | 8_4:+14979685 | Msa1315500:CDS |
| GCCATAACACTCCTGCTAGT+AGG | 0.598039 | 8_4:+14979647 | Msa1315500:CDS |
| TTTAAGCAGAAAATGGATGA+GGG | 0.600087 | 8_4:+14978381 | Msa1315500:CDS |
| AAAATGCTAAAGCAGAAGCC+AGG | 0.601345 | 8_4:+14980343 | Msa1315500:CDS |
| TTGGAGCTCAAGTGAAGAGG+AGG | 0.612723 | 8_4:+14979795 | Msa1315500:CDS |
| AAAGTGTTGCTATTATGAGC+TGG | 0.619013 | 8_4:-14978303 | None:intergenic |
| TTGGTGGACATGAGATCCCA+TGG | 0.620137 | 8_4:-14978512 | None:intergenic |
| AAATTGGAGCTCAAGTGAAG+AGG | 0.625563 | 8_4:+14979792 | Msa1315500:CDS |
| TTTAGGTTCAGCTTGCAAAG+TGG | 0.629888 | 8_4:-14978027 | None:intergenic |
| TCGATGTTAGATAATGCCAA+TGG | 0.645330 | 8_4:-14979676 | None:intergenic |
| CGGTGTGTGACATCTTGAAG+TGG | 0.670704 | 8_4:-14979602 | None:intergenic |
| GCAGGAGATGAACTCTTGAA+CGG | 0.677595 | 8_4:-14979622 | None:intergenic |
| AATGGTTCACAGGAAAGCTG+AGG | 0.679326 | 8_4:+14981495 | Msa1315500:CDS |
| TGTGTGACATCTTGAAGTGG+TGG | 0.688488 | 8_4:-14979599 | None:intergenic |
| TAAAGACTTGACAAACTCAG+AGG | 0.691687 | 8_4:-14978055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATTAATAAA+TGG | - | chr8_4:14980954-14980973 | None:intergenic | 0.0% |
| !! | AGAAATAATAATAAAAAGTT+TGG | - | chr8_4:14978675-14978694 | None:intergenic | 10.0% |
| !!! | AACATTTTATAGTATTATTA+AGG | - | chr8_4:14981283-14981302 | None:intergenic | 10.0% |
| !!! | AATTTTATTAATTCAACAAC+TGG | + | chr8_4:14979387-14979406 | Msa1315500:intron | 15.0% |
| !!! | CGATTAAATTTTTAAAACAT+TGG | - | chr8_4:14979945-14979964 | None:intergenic | 15.0% |
| !!! | GTTGAAAATATGTTTTAATT+AGG | - | chr8_4:14980208-14980227 | None:intergenic | 15.0% |
| !! | AATGTATGATAAAATAGATT+TGG | - | chr8_4:14980395-14980414 | None:intergenic | 15.0% |
| !!! | ATCTATTTTATCATACATTT+TGG | + | chr8_4:14980396-14980415 | Msa1315500:intron | 15.0% |
| !! | TAACAATAATAAACAATCTA+TGG | - | chr8_4:14980493-14980512 | None:intergenic | 15.0% |
| !! | AAAAAAAAATAGAACAATAG+TGG | - | chr8_4:14981114-14981133 | None:intergenic | 15.0% |
| !!! | TTTTCATTAGTTAAAGAAAT+TGG | + | chr8_4:14981130-14981149 | Msa1315500:intron | 15.0% |
| !!! | CAATGAAAAAGTTGAAATTT+TGG | - | chr8_4:14978576-14978595 | None:intergenic | 20.0% |
| !!! | TCATTTTTGCAAATTATTAC+CGG | + | chr8_4:14978930-14978949 | Msa1315500:intron | 20.0% |
| !! | ATTAAAACCTTGTCATTAAA+TGG | - | chr8_4:14979298-14979317 | None:intergenic | 20.0% |
| !!! | TTTTAAAACATTGGTTTGTA+AGG | - | chr8_4:14979936-14979955 | None:intergenic | 20.0% |
| !! | ATTTAATCGAAAAGTTCAAT+AGG | + | chr8_4:14979956-14979975 | Msa1315500:intron | 20.0% |
| !! | TGTTAACTACTTAATTTAGA+GGG | - | chr8_4:14980608-14980627 | None:intergenic | 20.0% |
| !! | ATGTTAACTACTTAATTTAG+AGG | - | chr8_4:14980609-14980628 | None:intergenic | 20.0% |
| !!! | AACGATTCATATTTTAAGTT+TGG | - | chr8_4:14980646-14980665 | None:intergenic | 20.0% |
| !!! | TTGATAATAGATTGTAATCT+AGG | + | chr8_4:14981158-14981177 | Msa1315500:intron | 20.0% |
| !! | TGATAATAGATTGTAATCTA+GGG | + | chr8_4:14981159-14981178 | Msa1315500:intron | 20.0% |
| !! | CATTATCATCATTATTCTTA+TGG | - | chr8_4:14981209-14981228 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTAACACATTTG+TGG | - | chr8_4:14981331-14981350 | None:intergenic | 20.0% |
| !!! | TTGAACATTAAAAATTTGCT+TGG | - | chr8_4:14981372-14981391 | None:intergenic | 20.0% |
| !!! | AGCATGCTTTATTAATTTAT+AGG | + | chr8_4:14981417-14981436 | Msa1315500:intron | 20.0% |
| !! | AAGCTAAAAAGATTATTCAT+AGG | + | chr8_4:14981575-14981594 | Msa1315500:three_prime_UTR | 20.0% |
| ! | CAATGAAATCATCAACAAAA+GGG | - | chr8_4:14978005-14978024 | None:intergenic | 25.0% |
| ! | TCAATGAAATCATCAACAAA+AGG | - | chr8_4:14978006-14978025 | None:intergenic | 25.0% |
| !! | AAAGAGTTTTCCTTCTAAAT+GGG | + | chr8_4:14978236-14978255 | Msa1315500:CDS | 25.0% |
| !!! | TACCTGAATTTTGGTAAAAT+TGG | - | chr8_4:14979448-14979467 | None:intergenic | 25.0% |
| !! | AATAAGAATCCTTCTTTTGT+TGG | - | chr8_4:14979478-14979497 | None:intergenic | 25.0% |
| !! | CATTTTTCTAAACTGCAATT+TGG | + | chr8_4:14979742-14979761 | Msa1315500:CDS | 25.0% |
| ! | TTGTATATGTACACTGTATA+TGG | - | chr8_4:14980823-14980842 | None:intergenic | 25.0% |
| ! | TATTGCATGAAATCAGTATA+GGG | - | chr8_4:14981032-14981051 | None:intergenic | 25.0% |
| ! | ATATTGCATGAAATCAGTAT+AGG | - | chr8_4:14981033-14981052 | None:intergenic | 25.0% |
| !! | TTTAATGGTTGTTATTGCAA+GGG | - | chr8_4:14981642-14981661 | None:intergenic | 25.0% |
| GAACATGTATAGCAAAAACA+AGG | + | chr8_4:14977957-14977976 | Msa1315500:CDS | 30.0% | |
| TTAGAAGGAAAACTCTTTCT+TGG | - | chr8_4:14978234-14978253 | None:intergenic | 30.0% | |
| ! | GAAAGAGTTTTCCTTCTAAA+TGG | + | chr8_4:14978235-14978254 | Msa1315500:CDS | 30.0% |
| !! | TAATGGCTTTAAGCAGAAAA+TGG | + | chr8_4:14978374-14978393 | Msa1315500:CDS | 30.0% |
| TTTAAGCAGAAAATGGATGA+GGG | + | chr8_4:14978381-14978400 | Msa1315500:CDS | 30.0% | |
| ! | TCAAAGTTCTTCTTCAAGTT+TGG | + | chr8_4:14978464-14978483 | Msa1315500:CDS | 30.0% |
| ! | TTTTTGCAAATTATTACCGG+TGG | + | chr8_4:14978933-14978952 | Msa1315500:intron | 30.0% |
| ! | TTTTGCAAATTATTACCGGT+GGG | + | chr8_4:14978934-14978953 | Msa1315500:intron | 30.0% |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr8_4:14978986-14979005 | Msa1315500:intron | 30.0% | |
| CTAACTCAAACTTACAAAAC+CGG | - | chr8_4:14979033-14979052 | None:intergenic | 30.0% | |
| ATAGTATCATTGTTAGTGTC+TGG | + | chr8_4:14979188-14979207 | Msa1315500:intron | 30.0% | |
| CAGACACTAACAATATTCAT+GGG | - | chr8_4:14979220-14979239 | None:intergenic | 30.0% | |
| ATTAGCCCATGAATGAAAAT+TGG | + | chr8_4:14979242-14979261 | Msa1315500:intron | 30.0% | |
| ! | CTCTTCCAATTTTCATTCAT+GGG | - | chr8_4:14979250-14979269 | None:intergenic | 30.0% |
| ! | TCTCTTCCAATTTTCATTCA+TGG | - | chr8_4:14979251-14979270 | None:intergenic | 30.0% |
| TTAAATGGCCAAATAGAAAG+AGG | - | chr8_4:14979283-14979302 | None:intergenic | 30.0% | |
| TATTTGGCCATTTAATGACA+AGG | + | chr8_4:14979288-14979307 | Msa1315500:intron | 30.0% | |
| ! | AGCCAATTTTACCAAAATTC+AGG | + | chr8_4:14979443-14979462 | Msa1315500:CDS | 30.0% |
| TATTCAGAACCAACAAAAGA+AGG | + | chr8_4:14979466-14979485 | Msa1315500:CDS | 30.0% | |
| GAAGTTAAACACAAAGATGT+TGG | + | chr8_4:14979550-14979569 | Msa1315500:CDS | 30.0% | |
| TTATCTAACATCGATAGCAA+TGG | + | chr8_4:14979685-14979704 | Msa1315500:CDS | 30.0% | |
| TGGAACAACAAAGTATGATT+TGG | + | chr8_4:14979762-14979781 | Msa1315500:CDS | 30.0% | |
| !!! | CTTGACTTAGGTTATTTTAG+CGG | + | chr8_4:14980000-14980019 | Msa1315500:intron | 30.0% |
| TTAAAAATCAAACCTGCATC+AGG | - | chr8_4:14980078-14980097 | None:intergenic | 30.0% | |
| AGTACAGGAAAATGATACAT+AGG | + | chr8_4:14980181-14980200 | Msa1315500:intron | 30.0% | |
| ! | TGCATTCATCTTATTTGCAT+TGG | + | chr8_4:14980244-14980263 | Msa1315500:intron | 30.0% |
| ATTGTGATTTGAATTGATGC+AGG | + | chr8_4:14980277-14980296 | Msa1315500:intron | 30.0% | |
| AAGAAGCAAAAATTCAAGCT+TGG | + | chr8_4:14980310-14980329 | Msa1315500:CDS | 30.0% | |
| !!! | ACATTTTGGTTAGTTTGCAA+TGG | + | chr8_4:14980410-14980429 | Msa1315500:intron | 30.0% |
| AACTACTTAATTTAGAGGGT+GGG | - | chr8_4:14980604-14980623 | None:intergenic | 30.0% | |
| TAACTACTTAATTTAGAGGG+TGG | - | chr8_4:14980605-14980624 | None:intergenic | 30.0% | |
| AGATTTATGTGTAATGCACA+TGG | + | chr8_4:14980756-14980775 | Msa1315500:intron | 30.0% | |
| GATTTATGTGTAATGCACAT+GGG | + | chr8_4:14980757-14980776 | Msa1315500:intron | 30.0% | |
| AAATAAGCCAGCAATATATC+CGG | - | chr8_4:14980904-14980923 | None:intergenic | 30.0% | |
| AAATGGTATCCATGAATTGA+GGG | - | chr8_4:14980937-14980956 | None:intergenic | 30.0% | |
| TAAATGGTATCCATGAATTG+AGG | - | chr8_4:14980938-14980957 | None:intergenic | 30.0% | |
| ! | AATCCAAGTTGAAAACTACT+AGG | + | chr8_4:14981242-14981261 | Msa1315500:intron | 30.0% |
| ! | TGTGGTTTTCAATGATTTTG+TGG | - | chr8_4:14981313-14981332 | None:intergenic | 30.0% |
| ! | GTTTAATGGTTGTTATTGCA+AGG | - | chr8_4:14981643-14981662 | None:intergenic | 30.0% |
| CAGAACAAACACATGTTTAA+TGG | - | chr8_4:14981657-14981676 | None:intergenic | 30.0% | |
| ! | CAAACTCAGAGGTTTCTTTT+AGG | - | chr8_4:14978047-14978066 | None:intergenic | 35.0% |
| TAAAGACTTGACAAACTCAG+AGG | - | chr8_4:14978058-14978077 | None:intergenic | 35.0% | |
| TCTTCTTCTTCTAGCATTGT+TGG | + | chr8_4:14978198-14978217 | Msa1315500:CDS | 35.0% | |
| AAGGAAAACTCTTTCTTGGA+AGG | - | chr8_4:14978230-14978249 | None:intergenic | 35.0% | |
| AATGGGATGATGCTGAAAAA+TGG | + | chr8_4:14978253-14978272 | Msa1315500:CDS | 35.0% | |
| !! | AAAGTGTTGCTATTATGAGC+TGG | - | chr8_4:14978306-14978325 | None:intergenic | 35.0% |
| GGAACAAGACAATGTGATAA+TGG | + | chr8_4:14978357-14978376 | Msa1315500:CDS | 35.0% | |
| CTTTAAGCAGAAAATGGATG+AGG | + | chr8_4:14978380-14978399 | Msa1315500:CDS | 35.0% | |
| !! | AGGGTTTTTCAGAGAAATCA+AGG | + | chr8_4:14978400-14978419 | Msa1315500:CDS | 35.0% |
| !! | GGGTTTTTCAGAGAAATCAA+GGG | + | chr8_4:14978401-14978420 | Msa1315500:CDS | 35.0% |
| TTTAGTACTATGTCTGTTGG+TGG | - | chr8_4:14978531-14978550 | None:intergenic | 35.0% | |
| ! | CCTTTTAGTACTATGTCTGT+TGG | - | chr8_4:14978534-14978553 | None:intergenic | 35.0% |
| CCAACAGACATAGTACTAAA+AGG | + | chr8_4:14978531-14978550 | Msa1315500:CDS | 35.0% | |
| CAGACATAGTACTAAAAGGT+AGG | + | chr8_4:14978535-14978554 | Msa1315500:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr8_4:14978989-14979008 | Msa1315500:intron | 35.0% | |
| !! | CGGTTTTGTAAGTTTGAGTT+AGG | + | chr8_4:14979031-14979050 | Msa1315500:intron | 35.0% |
| GTTGGTATCATTGTTAGTGT+CGG | + | chr8_4:14979080-14979099 | Msa1315500:intron | 35.0% | |
| TTGGTATCATTGTTAGTGTC+GGG | + | chr8_4:14979081-14979100 | Msa1315500:intron | 35.0% | |
| CCAGACACTAACAATATTCA+TGG | - | chr8_4:14979221-14979240 | None:intergenic | 35.0% | |
| CCATGAATATTGTTAGTGTC+TGG | + | chr8_4:14979218-14979237 | Msa1315500:intron | 35.0% | |
| CCAAATAGAAAGAGGAAGTT+GGG | - | chr8_4:14979275-14979294 | None:intergenic | 35.0% | |
| !!! | GGTTCTGAATACCTGAATTT+TGG | - | chr8_4:14979457-14979476 | None:intergenic | 35.0% |
| ATTCAGAAATCAAGCTTGTG+AGG | + | chr8_4:14979495-14979514 | Msa1315500:CDS | 35.0% | |
| TCGATGTTAGATAATGCCAA+TGG | - | chr8_4:14979679-14979698 | None:intergenic | 35.0% | |
| TAACCTAAGTCAAGAAAGTG+TGG | - | chr8_4:14979994-14980013 | None:intergenic | 35.0% | |
| TGTCAATTCATCGACGAAAA+TGG | - | chr8_4:14980132-14980151 | None:intergenic | 35.0% | |
| CTGAAGTAGTAAAGAAGGTA+AGG | - | chr8_4:14980155-14980174 | None:intergenic | 35.0% | |
| GAAAGCTGAAGTAGTAAAGA+AGG | - | chr8_4:14980160-14980179 | None:intergenic | 35.0% | |
| ATCATTACATCGAAAACCGT+TGG | - | chr8_4:14980679-14980698 | None:intergenic | 35.0% | |
| ! | AACGGTTTTCGATGTAATGA+TGG | + | chr8_4:14980678-14980697 | Msa1315500:intron | 35.0% |
| CCTTGGATTCTACATACTTT+AGG | - | chr8_4:14980800-14980819 | None:intergenic | 35.0% | |
| CCTAAAGTATGTAGAATCCA+AGG | + | chr8_4:14980797-14980816 | Msa1315500:intron | 35.0% | |
| ACTACAATAGAATGCATTGC+CGG | + | chr8_4:14980882-14980901 | Msa1315500:intron | 35.0% | |
| !! | TGGACTAGTATTGTATTGAC+TGG | - | chr8_4:14980983-14981002 | None:intergenic | 35.0% |
| ! | ATGCCTAGTAGTTTTCAACT+TGG | - | chr8_4:14981248-14981267 | None:intergenic | 35.0% |
| ! | CTAGGTTTGATCTCATCTTT+TGG | - | chr8_4:14981450-14981469 | None:intergenic | 35.0% |
| TCTTCATCAACTTCTCTTCT+AGG | - | chr8_4:14981468-14981487 | None:intergenic | 35.0% | |
| !! | TAGAAGAGAAGTTGATGAAG+AGG | + | chr8_4:14981467-14981486 | Msa1315500:CDS | 35.0% |
| ACAACAACACTTAGAGCAAA+TGG | + | chr8_4:14981537-14981556 | Msa1315500:three_prime_UTR | 35.0% | |
| ! | GGCATAACTCACAATTTTCT+AGG | + | chr8_4:14981596-14981615 | Msa1315500:three_prime_UTR | 35.0% |
| ! | TTTAGGTTCAGCTTGCAAAG+TGG | - | chr8_4:14978030-14978049 | None:intergenic | 40.0% |
| ! | TCTGCATTGGTGTTTGAAAC+TGG | - | chr8_4:14978081-14978100 | None:intergenic | 40.0% |
| ! | GAGTCTTCTGTTTTCTGCAT+TGG | - | chr8_4:14978094-14978113 | None:intergenic | 40.0% |
| GAAGAACTGAAGCTGAAAAG+TGG | - | chr8_4:14978174-14978193 | None:intergenic | 40.0% | |
| TCAGCATCATCCCATTTAGA+AGG | - | chr8_4:14978249-14978268 | None:intergenic | 40.0% | |
| ! | GCTGTTTCATCTTCAGAATC+TGG | + | chr8_4:14978336-14978355 | Msa1315500:CDS | 40.0% |
| TTGGACCACAATAACAGTGT+TGG | + | chr8_4:14978483-14978502 | Msa1315500:CDS | 40.0% | |
| AAGCTCCAACACTGTTATTG+TGG | - | chr8_4:14978491-14978510 | None:intergenic | 40.0% | |
| CACTCTTAGGTCAAGTCAAT+GGG | - | chr8_4:14978789-14978808 | None:intergenic | 40.0% | |
| ACACTCTTAGGTCAAGTCAA+TGG | - | chr8_4:14978790-14978809 | None:intergenic | 40.0% | |
| ! | TTGACTTGACCTAAGAGTGT+AGG | + | chr8_4:14978790-14978809 | Msa1315500:intron | 40.0% |
| TTCAACCAACCTACACTCTT+AGG | - | chr8_4:14978802-14978821 | None:intergenic | 40.0% | |
| GAGTTATGTAGCACTCATAC+TGG | + | chr8_4:14978861-14978880 | Msa1315500:intron | 40.0% | |
| GATTTAGTCCCATATCGGAT+AGG | + | chr8_4:14978956-14978975 | Msa1315500:intron | 40.0% | |
| GAATCCTACCTATCCGATAT+GGG | - | chr8_4:14978967-14978986 | None:intergenic | 40.0% | |
| AGAATCCTACCTATCCGATA+TGG | - | chr8_4:14978968-14978987 | None:intergenic | 40.0% | |
| !! | ACTTACAAAACCGGCTTGTA+CGG | - | chr8_4:14979024-14979043 | None:intergenic | 40.0% |
| ACTGACACAATTGATGTCAC+GGG | - | chr8_4:14979058-14979077 | None:intergenic | 40.0% | |
| CACTGACACAATTGATGTCA+CGG | - | chr8_4:14979059-14979078 | None:intergenic | 40.0% | |
| CATCAATTGTGTCAGTGTGT+TGG | + | chr8_4:14979062-14979081 | Msa1315500:intron | 40.0% | |
| CCCAACTTCCTCTTTCTATT+TGG | + | chr8_4:14979272-14979291 | Msa1315500:intron | 40.0% | |
| GCCAAATAGAAAGAGGAAGT+TGG | - | chr8_4:14979276-14979295 | None:intergenic | 40.0% | |
| AGCAGTCACGATAATAGTTG+CGG | + | chr8_4:14979325-14979344 | Msa1315500:intron | 40.0% | |
| !! | ATGATTTGGTCGCACCAAAT+TGG | + | chr8_4:14979776-14979795 | Msa1315500:CDS | 40.0% |
| TCTTCACTTGAGCTCCAATT+TGG | - | chr8_4:14979793-14979812 | None:intergenic | 40.0% | |
| AAATTGGAGCTCAAGTGAAG+AGG | + | chr8_4:14979792-14979811 | Msa1315500:CDS | 40.0% | |
| TGATTGTATAGCTGCCAGTT+GGG | + | chr8_4:14979870-14979889 | Msa1315500:intron | 40.0% | |
| ! | AGAAGAACAAGTGCTGTCTT+AGG | + | chr8_4:14979902-14979921 | Msa1315500:intron | 40.0% |
| ! | AGTCAAGAAAGTGTGGATCA+TGG | - | chr8_4:14979987-14980006 | None:intergenic | 40.0% |
| GATCCACACTTTCTTGACTT+AGG | + | chr8_4:14979988-14980007 | Msa1315500:intron | 40.0% | |
| ! | CTACTTCAGCTTTCAAGTAC+AGG | + | chr8_4:14980166-14980185 | Msa1315500:intron | 40.0% |
| ! | CTTCTGCTTTAGCATTTTGG+AGG | - | chr8_4:14980341-14980360 | None:intergenic | 40.0% |
| ! | TGGCTTCTGCTTTAGCATTT+TGG | - | chr8_4:14980344-14980363 | None:intergenic | 40.0% |
| AAAATGCTAAAGCAGAAGCC+AGG | + | chr8_4:14980343-14980362 | Msa1315500:CDS | 40.0% | |
| !!! | TACCTCAAGCTTTTTTGACC+TGG | - | chr8_4:14980364-14980383 | None:intergenic | 40.0% |
| AGGTCTAGTAATGTGGTCAA+AGG | - | chr8_4:14980566-14980585 | None:intergenic | 40.0% | |
| GAGGTTAAGGTCTAGTAATG+TGG | - | chr8_4:14980573-14980592 | None:intergenic | 40.0% | |
| TTAATTTAGAGGGTGGGTGA+GGG | - | chr8_4:14980598-14980617 | None:intergenic | 40.0% | |
| ATCGTTTGATCGTGATCCAA+CGG | + | chr8_4:14980660-14980679 | Msa1315500:intron | 40.0% | |
| ! | GTTCAAGCTGCTTTGCAAAA+GGG | - | chr8_4:14980722-14980741 | None:intergenic | 40.0% |
| ! | AGTTCAAGCTGCTTTGCAAA+AGG | - | chr8_4:14980723-14980742 | None:intergenic | 40.0% |
| AAGCAGCTTGAACTGTTTGT+AGG | + | chr8_4:14980729-14980748 | Msa1315500:intron | 40.0% | |
| TATGTGTAATGCACATGGGA+TGG | + | chr8_4:14980761-14980780 | Msa1315500:intron | 40.0% | |
| ATGTGTAATGCACATGGGAT+GGG | + | chr8_4:14980762-14980781 | Msa1315500:intron | 40.0% | |
| ATGTACACTGTATATGGCCT+TGG | - | chr8_4:14980817-14980836 | None:intergenic | 40.0% | |
| ! | GTTGATGAAGAGGATGTCAA+TGG | + | chr8_4:14981477-14981496 | Msa1315500:CDS | 40.0% |
| ! | TTTTCTAGGCACAGTTCATG+TGG | + | chr8_4:14981610-14981629 | Msa1315500:three_prime_UTR | 40.0% |
| AAGCTGAAAAGTGGTCTACC+AGG | - | chr8_4:14978165-14978184 | None:intergenic | 45.0% | |
| ! | AACAGTGTTGGAGCTTTCCA+TGG | + | chr8_4:14978495-14978514 | Msa1315500:CDS | 45.0% |
| ! | ACAGTGTTGGAGCTTTCCAT+GGG | + | chr8_4:14978496-14978515 | Msa1315500:CDS | 45.0% |
| ! | CTTGACCTAAGAGTGTAGGT+TGG | + | chr8_4:14978794-14978813 | Msa1315500:intron | 45.0% |
| GATATGGGACTAAATCCCAC+CGG | - | chr8_4:14978952-14978971 | None:intergenic | 45.0% | |
| GGTGGGATTTAGTCCCATAT+CGG | + | chr8_4:14978951-14978970 | Msa1315500:intron | 45.0% | |
| TAGTCCCATATCGGATAGGT+AGG | + | chr8_4:14978960-14978979 | Msa1315500:intron | 45.0% | |
| CTGACACAATTGATGTCACG+GGG | - | chr8_4:14979057-14979076 | None:intergenic | 45.0% | |
| GGCACAGAAATGACTCCATT+AGG | + | chr8_4:14979571-14979590 | Msa1315500:CDS | 45.0% | |
| ! | GAAGTGGTGGAACTTCCTAA+TGG | - | chr8_4:14979589-14979608 | None:intergenic | 45.0% |
| TGTGTGACATCTTGAAGTGG+TGG | - | chr8_4:14979602-14979621 | None:intergenic | 45.0% | |
| GCAGGAGATGAACTCTTGAA+CGG | - | chr8_4:14979625-14979644 | None:intergenic | 45.0% | |
| !! | ACCTACTAGCAGGAGTGTTA+TGG | - | chr8_4:14979651-14979670 | None:intergenic | 45.0% |
| CTCAAGTGAAGAGGAGGAAA+AGG | + | chr8_4:14979801-14979820 | Msa1315500:CDS | 45.0% | |
| CTGATTGTATAGCTGCCAGT+TGG | + | chr8_4:14979869-14979888 | Msa1315500:intron | 45.0% | |
| CTTCTCATCATCTTCCCAAC+TGG | - | chr8_4:14979887-14979906 | None:intergenic | 45.0% | |
| AGCCAGGTCAAAAAAGCTTG+AGG | + | chr8_4:14980359-14980378 | Msa1315500:intron | 45.0% | |
| CTTAATTTAGAGGGTGGGTG+AGG | - | chr8_4:14980599-14980618 | None:intergenic | 45.0% | |
| CAGCTTGAACTGTTTGTAGG+TGG | + | chr8_4:14980732-14980751 | Msa1315500:intron | 45.0% | |
| TGCATTGCCGGATATATTGC+TGG | + | chr8_4:14980894-14980913 | Msa1315500:intron | 45.0% | |
| TGGTATCCATGAATTGAGGG+TGG | - | chr8_4:14980934-14980953 | None:intergenic | 45.0% | |
| CTAGTCCACTTCTGTGTTTG+AGG | + | chr8_4:14980995-14981014 | Msa1315500:intron | 45.0% | |
| GTGATCCTCAAACACAGAAG+TGG | - | chr8_4:14981003-14981022 | None:intergenic | 45.0% | |
| AGAGGATGTCAATGGTTCAC+AGG | + | chr8_4:14981485-14981504 | Msa1315500:CDS | 45.0% | |
| AATGGTTCACAGGAAAGCTG+AGG | + | chr8_4:14981495-14981514 | Msa1315500:CDS | 45.0% | |
| TTCACAGGAAAGCTGAGGAT+TGG | + | chr8_4:14981500-14981519 | Msa1315500:exon | 45.0% | |
| CTAGAAGCTCCTTCTACACC+TGG | + | chr8_4:14978144-14978163 | Msa1315500:CDS | 50.0% | |
| AGTGGTCTACCAGGTGTAGA+AGG | - | chr8_4:14978156-14978175 | None:intergenic | 50.0% | |
| ! | TTGGTGGACATGAGATCCCA+TGG | - | chr8_4:14978515-14978534 | None:intergenic | 50.0% |
| TGTGACAACCGCATACGTGT+TGG | - | chr8_4:14978899-14978918 | None:intergenic | 50.0% | |
| CGGTGTGTGACATCTTGAAG+TGG | - | chr8_4:14979605-14979624 | None:intergenic | 50.0% | |
| GCCATAACACTCCTGCTAGT+AGG | + | chr8_4:14979647-14979666 | Msa1315500:CDS | 50.0% | |
| AACACTCCTGCTAGTAGGTC+AGG | + | chr8_4:14979652-14979671 | Msa1315500:CDS | 50.0% | |
| AATGGTCCTGACCTACTAGC+AGG | - | chr8_4:14979661-14979680 | None:intergenic | 50.0% | |
| TGCTAGTAGGTCAGGACCAT+TGG | + | chr8_4:14979660-14979679 | Msa1315500:CDS | 50.0% | |
| TTGGAGCTCAAGTGAAGAGG+AGG | + | chr8_4:14979795-14979814 | Msa1315500:CDS | 50.0% | |
| ATCAAACCTGCATCAGGTCG+AGG | - | chr8_4:14980072-14980091 | None:intergenic | 50.0% | |
| AGCACTCATACTGGCGTGTC+CGG | + | chr8_4:14978870-14978889 | Msa1315500:intron | 55.0% | |
| TCCGGTGTCCAACACGTATG+CGG | + | chr8_4:14978888-14978907 | Msa1315500:intron | 55.0% | |
| ACCGCATACGTGTTGGACAC+CGG | - | chr8_4:14978892-14978911 | None:intergenic | 55.0% | |
| !! | CAAAACCGGCTTGTACGGTG+AGG | - | chr8_4:14979019-14979038 | None:intergenic | 55.0% |
| GTTGAACCTCGACCTGATGC+AGG | + | chr8_4:14980063-14980082 | Msa1315500:intron | 55.0% | |
| GTGGGTGAGGGTAGAGGTTA+AGG | - | chr8_4:14980586-14980605 | None:intergenic | 55.0% | |
| CATGAATTGAGGGTGGCTCG+AGG | - | chr8_4:14980927-14980946 | None:intergenic | 55.0% | |
| CTCGAGCCACCCTCAATTCA+TGG | + | chr8_4:14980925-14980944 | Msa1315500:intron | 55.0% | |
| GCACTCCTCACCGTACAAGC+CGG | + | chr8_4:14979011-14979030 | Msa1315500:intron | 60.0% | |
| TAGAGGGTGGGTGAGGGTAG+AGG | - | chr8_4:14980592-14980611 | None:intergenic | 60.0% | |
| !! | GCAGGAGTGTTATGGCGCGC+AGG | - | chr8_4:14979643-14979662 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14977955 | 14981703 | 14977955 | ID=Msa1315500;Name=Msa1315500 |
| chr8_4 | mRNA | 14977955 | 14981703 | 14977955 | ID=Msa1315500-mRNA-1;Parent=Msa1315500;Name=Msa1315500-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0.33|0.25|1|1|1|4|188|397 |
| chr8_4 | exon | 14977955 | 14978552 | 14977955 | ID=Msa1315500-mRNA-1:exon:5676;Parent=Msa1315500-mRNA-1 |
| chr8_4 | exon | 14979422 | 14979874 | 14979422 | ID=Msa1315500-mRNA-1:exon:5677;Parent=Msa1315500-mRNA-1 |
| chr8_4 | exon | 14980299 | 14980364 | 14980299 | ID=Msa1315500-mRNA-1:exon:5678;Parent=Msa1315500-mRNA-1 |
| chr8_4 | exon | 14981439 | 14981703 | 14981439 | ID=Msa1315500-mRNA-1:exon:5679;Parent=Msa1315500-mRNA-1 |
| chr8_4 | CDS | 14977955 | 14978552 | 14977955 | ID=Msa1315500-mRNA-1:cds;Parent=Msa1315500-mRNA-1 |
| chr8_4 | CDS | 14979422 | 14979874 | 14979422 | ID=Msa1315500-mRNA-1:cds;Parent=Msa1315500-mRNA-1 |
| chr8_4 | CDS | 14980299 | 14980364 | 14980299 | ID=Msa1315500-mRNA-1:cds;Parent=Msa1315500-mRNA-1 |
| chr8_4 | CDS | 14981439 | 14981515 | 14981439 | ID=Msa1315500-mRNA-1:cds;Parent=Msa1315500-mRNA-1 |
| chr8_4 | three_prime_UTR | 14981516 | 14981703 | 14981516 | ID=Msa1315500-mRNA-1:three_prime_utr;Parent=Msa1315500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
