Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0424780 | XP_003602229.2 | 98.966 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0424780 | sp|Q9LV04|PAP14_ARATH | 67.994 | 628 | 188 | 5 | 52 | 675 | 51 | 669 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0424780 | G7J6U8 | 98.966 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035980 | Msa0424780 | 0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa0036060 | Msa0424780 | 0.810511 | 1.111605e-50 | -8.615850e-47 |
| Msa0197180 | Msa0424780 | 0.867794 | 1.052448e-65 | -8.615850e-47 |
| Msa0225880 | Msa0424780 | 0.804654 | 1.946891e-49 | -8.615850e-47 |
| Msa0376340 | Msa0424780 | 0.974511 | 2.763889e-138 | -8.615850e-47 |
| Msa0424780 | Msa0516160 | 0.979956 | 4.043848e-149 | -8.615850e-47 |
| Msa0424780 | Msa0629440 | -0.854786 | 9.760724e-62 | -8.615850e-47 |
| Msa0424780 | Msa0667070 | -0.860705 | 1.714030e-63 | -8.615850e-47 |
| Msa0424780 | Msa0713210 | 0.817136 | 3.856414e-52 | -8.615850e-47 |
| Msa0424780 | Msa0713220 | 0.823238 | 1.542386e-53 | -8.615850e-47 |
| Msa0424780 | Msa0713230 | 0.856269 | 3.605368e-62 | -8.615850e-47 |
| Msa0424780 | Msa0755080 | 0.840783 | 7.061745e-58 | -8.615850e-47 |
| Msa0424780 | Msa0796950 | 0.829753 | 4.315967e-55 | -8.615850e-47 |
| Msa0424780 | Msa0797000 | 0.809127 | 2.206248e-50 | -8.615850e-47 |
| Msa0424780 | Msa0834450 | 0.839959 | 1.159988e-57 | -8.615850e-47 |
| Msa0424780 | Msa1204600 | -0.821296 | 4.354771e-53 | -8.615850e-47 |
| Msa0424780 | Msa1329420 | -0.807682 | 4.485962e-50 | -8.615850e-47 |
| Msa0424780 | Msa1412620 | -0.840856 | 6.756672e-58 | -8.615850e-47 |
| Msa0238940 | Msa0424780 | 0.877263 | 7.227670e-69 | -8.615850e-47 |
| Msa0260470 | Msa0424780 | 0.807612 | 4.643379e-50 | -8.615850e-47 |
| Msa0304110 | Msa0424780 | 0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0308770 | Msa0424780 | 0.827611 | 1.422168e-54 | -8.615850e-47 |
| Msa0316750 | Msa0424780 | 0.863388 | 2.579863e-64 | -8.615850e-47 |
| Msa0341190 | Msa0424780 | 0.809610 | 1.737547e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0424780 | MtrunA17_Chr3g0126681 | 98.966 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0424780 | AT5G53450.1 | 67.994 | 628 | 188 | 5 | 52 | 675 | 51 | 669 | 0.0 | 875 |
| Msa0424780 | AT5G53450.2 | 69.140 | 593 | 175 | 4 | 87 | 675 | 1 | 589 | 0.0 | 849 |
| Msa0424780 | AT5G53450.3 | 73.415 | 410 | 103 | 2 | 52 | 460 | 51 | 455 | 0.0 | 620 |
Find 218 sgRNAs with CRISPR-Local
Find 508 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGAATAGGAGATATTT+AGG | 0.120251 | 3_2:+75038910 | Msa0424780:five_prime_UTR |
| GTTCAAAATGTCAGACTTTA+AGG | 0.129862 | 3_2:+75039703 | Msa0424780:CDS |
| TCTTCTTCCCTTTCTCATTC+TGG | 0.159701 | 3_2:+75039060 | Msa0424780:five_prime_UTR |
| TGCCCACTTCATTGACTTAT+TGG | 0.179035 | 3_2:+75044477 | Msa0424780:CDS |
| AACTGGGCCATACCCGATTT+TGG | 0.210340 | 3_2:+75039454 | Msa0424780:CDS |
| TCCCTTTCTCATTCTGGTTC+TGG | 0.211362 | 3_2:+75039066 | Msa0424780:five_prime_UTR |
| CTTTGATATGTCTGTCTATT+GGG | 0.212760 | 3_2:-75040763 | None:intergenic |
| ACTTTGATATGTCTGTCTAT+TGG | 0.221644 | 3_2:-75040764 | None:intergenic |
| TTTGACAAATCAAATATTTC+AGG | 0.222651 | 3_2:-75045340 | None:intergenic |
| AACTGGCTGGAGCTGCTTCC+AGG | 0.254995 | 3_2:+75044818 | Msa0424780:CDS |
| TTGATGAGAGATCTTCTAAT+TGG | 0.256001 | 3_2:+75040553 | Msa0424780:CDS |
| CTCGTTCTTCGAGGGGTTAA+TGG | 0.264678 | 3_2:+75045397 | Msa0424780:CDS |
| CCAAACCTTCTCGGAGAATA+AGG | 0.274308 | 3_2:+75043774 | Msa0424780:CDS |
| CTGGAGGTCCCGCAATTTCT+AGG | 0.275529 | 3_2:+75040509 | Msa0424780:CDS |
| TGGAGCTGCTTCCAGGAAAA+TGG | 0.295461 | 3_2:+75044825 | Msa0424780:CDS |
| AATGGTAATGGGAGAGCTTA+TGG | 0.295872 | 3_2:+75041722 | Msa0424780:CDS |
| CGCAGATGCTTGATAGGAAC+TGG | 0.312588 | 3_2:+75043714 | Msa0424780:intron |
| CCACAAAAGACCTTGTAAAT+AGG | 0.336553 | 3_2:-75045429 | None:intergenic |
| AAGCAAACGGAAGAGGTCTT+TGG | 0.337571 | 3_2:-75039653 | None:intergenic |
| TTGCTAGCAATAAAGATAAA+AGG | 0.349174 | 3_2:-75043751 | None:intergenic |
| ACAATGGCACTTTGTAGAAC+TGG | 0.349658 | 3_2:+75039437 | Msa0424780:exon |
| AAGAATGATACAAAAGTTTA+CGG | 0.352849 | 3_2:-75040151 | None:intergenic |
| TCTTACTCAATGCAAGTTCA+TGG | 0.355670 | 3_2:+75040170 | Msa0424780:CDS |
| ACAGTTGTTTGGATGCTCTA+AGG | 0.356940 | 3_2:+75044115 | Msa0424780:intron |
| CTTTCCTTCGTCTCTGACAT+TGG | 0.357555 | 3_2:+75044965 | Msa0424780:CDS |
| AGGACATTACTCTCCAAAAT+CGG | 0.359879 | 3_2:-75039467 | None:intergenic |
| TCATGAATTACCTTTGGCTT+TGG | 0.361109 | 3_2:-75044517 | None:intergenic |
| AGATTGGCTTCAAACTTTAG+AGG | 0.363419 | 3_2:+75040435 | Msa0424780:CDS |
| TGCTAGCAACCAAACCTTCT+CGG | 0.365898 | 3_2:+75043765 | Msa0424780:CDS |
| AGCTAAAGCCTCCTCATTGC+CGG | 0.372894 | 3_2:-75045137 | None:intergenic |
| GCATTTCAGATAACTAAGTT+TGG | 0.373211 | 3_2:-75045611 | None:intergenic |
| CCCGTTCCCCTGCGTTTCGC+TGG | 0.375211 | 3_2:+75039530 | Msa0424780:CDS |
| TTTCCAGCCTCAACTCTGTA+TGG | 0.381724 | 3_2:-75040727 | None:intergenic |
| CCTTATTCTCCGAGAAGGTT+TGG | 0.381787 | 3_2:-75043774 | None:intergenic |
| TAAGGCACCCATTCCTTTGT+GGG | 0.389110 | 3_2:+75044133 | Msa0424780:CDS |
| TGAAATGTTCTACAGTTGTT+TGG | 0.391603 | 3_2:+75044104 | Msa0424780:intron |
| TTGGCTGCAGGGAGACTTGA+TGG | 0.392350 | 3_2:-75045211 | None:intergenic |
| AGGCTCTCATTCCGCCCTTC+CGG | 0.392663 | 3_2:+75045118 | Msa0424780:CDS |
| CTAAGGCACCCATTCCTTTG+TGG | 0.393568 | 3_2:+75044132 | Msa0424780:CDS |
| TCAAGAAGTCTGTTCTGGTT+AGG | 0.393706 | 3_2:+75045639 | Msa0424780:three_prime_UTR |
| AAGAGAATAGGAGATATTTA+GGG | 0.395033 | 3_2:+75038911 | Msa0424780:five_prime_UTR |
| TGCGAGGATGGTTCAAATAG+AGG | 0.402772 | 3_2:+75041545 | Msa0424780:CDS |
| AACCCGTGGCAAAACGTTCC+CGG | 0.402816 | 3_2:+75038956 | Msa0424780:five_prime_UTR |
| TGGTTCAAATAGAGGCTCTA+TGG | 0.411364 | 3_2:+75041553 | Msa0424780:CDS |
| ATGGAGTTGATGAATAATAT+AGG | 0.418735 | 3_2:-75039023 | None:intergenic |
| AAAGACCTCTTCCGTTTGCT+TGG | 0.420899 | 3_2:+75039655 | Msa0424780:CDS |
| CGTTTGCTTGGAGGAGGAAA+CGG | 0.423814 | 3_2:+75039667 | Msa0424780:CDS |
| ATCTTGGCCCACAAAGGAAT+GGG | 0.427323 | 3_2:-75044140 | None:intergenic |
| GAACCACTACCACCACTTGC+AGG | 0.429048 | 3_2:-75040206 | None:intergenic |
| ATTGGATTCTCAGTCATGAT+TGG | 0.433535 | 3_2:+75044983 | Msa0424780:CDS |
| ATTGCACTGGGAGGCATGTT+GGG | 0.434475 | 3_2:+75044858 | Msa0424780:CDS |
| AACTCTCCATATGGAAATGC+TGG | 0.437695 | 3_2:+75043590 | Msa0424780:CDS |
| GACCTCTTCCGTTTGCTTGG+AGG | 0.438345 | 3_2:+75039658 | Msa0424780:CDS |
| CTCTTCCGTTTGCTTGGAGG+AGG | 0.440275 | 3_2:+75039661 | Msa0424780:CDS |
| TCTTCATTTATACTAAGAGC+TGG | 0.440657 | 3_2:+75045058 | Msa0424780:CDS |
| CCAGCGAAACGCAGGGGAAC+GGG | 0.440698 | 3_2:-75039530 | None:intergenic |
| CCCTGCAGCCAAGTTTGCGT+CGG | 0.442632 | 3_2:+75045222 | Msa0424780:CDS |
| CAAGGTTGCTCGTTCTTCGA+GGG | 0.443241 | 3_2:+75045389 | Msa0424780:CDS |
| CTTGATAGGAACTGGGGTGC+TGG | 0.444714 | 3_2:+75043722 | Msa0424780:CDS |
| ACTGGCTTCAACAGTCAGAT+TGG | 0.445941 | 3_2:+75040419 | Msa0424780:CDS |
| GCAAGGTTAAGGACAGTGTT+AGG | 0.447501 | 3_2:+75039870 | Msa0424780:CDS |
| GATCGTGTTAGCATTGGCCT+TGG | 0.450399 | 3_2:+75039731 | Msa0424780:CDS |
| CGTGTTAGCATTGGCCTTGG+TGG | 0.453499 | 3_2:+75039734 | Msa0424780:CDS |
| CGCAATTGCCTAGAAATTGC+GGG | 0.453953 | 3_2:-75040517 | None:intergenic |
| ATCTGCATCTGCTTCTTCAA+TGG | 0.455111 | 3_2:+75039613 | Msa0424780:CDS |
| CCCGACGCAAACTTGGCTGC+AGG | 0.456334 | 3_2:-75045223 | None:intergenic |
| TTAGCATTGGCCTTGGTGGA+CGG | 0.458317 | 3_2:+75039738 | Msa0424780:CDS |
| CTCGGCAGAAACTCTCCATA+TGG | 0.459506 | 3_2:+75043581 | Msa0424780:CDS |
| AATATCACCCGACGCAAACT+TGG | 0.460107 | 3_2:-75045230 | None:intergenic |
| TCAAGGTTGCTCGTTCTTCG+AGG | 0.464225 | 3_2:+75045388 | Msa0424780:CDS |
| TGTAAGCCAGCATTTCCATA+TGG | 0.466848 | 3_2:-75043596 | None:intergenic |
| TAGCATTGGCCTTGGTGGAC+GGG | 0.468949 | 3_2:+75039739 | Msa0424780:CDS |
| GATATTATCAGATGGGGTCT+AGG | 0.469138 | 3_2:+75044183 | Msa0424780:CDS |
| CATTCCTTTGTGGGCCAAGA+TGG | 0.470311 | 3_2:+75044142 | Msa0424780:CDS |
| TTGACAAATCAAATATTTCA+GGG | 0.473307 | 3_2:-75045339 | None:intergenic |
| TTGATGGAAACTCCTTGAAA+GGG | 0.473643 | 3_2:-75045195 | None:intergenic |
| GCGGATGAGGTGGTGTTTGA+AGG | 0.474409 | 3_2:+75039848 | Msa0424780:CDS |
| TATTGCACTGGGAGGCATGT+TGG | 0.474879 | 3_2:+75044857 | Msa0424780:CDS |
| CGCATATAAATTTGTCGACA+AGG | 0.477146 | 3_2:+75039498 | Msa0424780:CDS |
| ATGTTTGCGACAGCTTATGA+TGG | 0.477520 | 3_2:+75043553 | Msa0424780:CDS |
| TCGAGGAAAACGAGCAATAG+AGG | 0.477773 | 3_2:+75040030 | Msa0424780:CDS |
| TGGCGCCTATTGTATTGCAC+TGG | 0.478793 | 3_2:+75044845 | Msa0424780:CDS |
| CTTCAAGGTATTGAAGAAGC+TGG | 0.479242 | 3_2:+75040124 | Msa0424780:intron |
| ATTACCTTTGGCTTTGGATG+AGG | 0.480526 | 3_2:-75044511 | None:intergenic |
| TACTTAACAGGTCGGTACAC+TGG | 0.480880 | 3_2:+75041505 | Msa0424780:intron |
| CCTGCAGCCAAGTTTGCGTC+GGG | 0.481345 | 3_2:+75045223 | Msa0424780:CDS |
| GCCTCCCAGTGCAATACAAT+AGG | 0.481435 | 3_2:-75044850 | None:intergenic |
| TTGAACTTTGCGAATATCAA+AGG | 0.482258 | 3_2:-75041747 | None:intergenic |
| GAGAAAGGGAAGAAGAGTAT+TGG | 0.483685 | 3_2:-75039053 | None:intergenic |
| CACTGGACGAAGAATCTGTT+AGG | 0.487203 | 3_2:+75040467 | Msa0424780:CDS |
| CACCAGAACCAGAATGAGAA+AGG | 0.489960 | 3_2:-75039068 | None:intergenic |
| ATCTGTGTTACAAAGATGCA+TGG | 0.496023 | 3_2:+75041683 | Msa0424780:intron |
| CAGTCATGATTGGTCAGGAC+TGG | 0.496294 | 3_2:+75044993 | Msa0424780:CDS |
| CTCCTCCAAGCAAACGGAAG+AGG | 0.498371 | 3_2:-75039660 | None:intergenic |
| TAGTAGAGAATCAAAGTTGA+AGG | 0.500017 | 3_2:+75044937 | Msa0424780:CDS |
| CATCTTGGCCCACAAAGGAA+TGG | 0.503376 | 3_2:-75044141 | None:intergenic |
| AAGGTAGGAGAAGACACAAC+TGG | 0.503564 | 3_2:+75040490 | Msa0424780:CDS |
| ATTCTCAGTCATGATTGGTC+AGG | 0.504324 | 3_2:+75044988 | Msa0424780:CDS |
| CTTCATTTATACTAAGAGCT+GGG | 0.510302 | 3_2:+75045059 | Msa0424780:CDS |
| TCCAGCGAAACGCAGGGGAA+CGG | 0.511956 | 3_2:-75039531 | None:intergenic |
| GGTGTTTGAAGGCAAGGTTA+AGG | 0.513946 | 3_2:+75039859 | Msa0424780:CDS |
| GACGGGACTACTCGCCATCT+TGG | 0.515034 | 3_2:-75044156 | None:intergenic |
| ATAGGAACTGGGGTGCTGGT+TGG | 0.515505 | 3_2:+75043726 | Msa0424780:CDS |
| CATGACAAAGCTGGTAAAAG+AGG | 0.515642 | 3_2:+75045019 | Msa0424780:CDS |
| GAAGAGTATTGGATGGAACA+TGG | 0.515807 | 3_2:-75039042 | None:intergenic |
| TAACTCTTGTGTTATACAAA+GGG | 0.516202 | 3_2:-75039973 | None:intergenic |
| TTTAGAGGCCACTCTTGCAC+TGG | 0.516388 | 3_2:+75040450 | Msa0424780:CDS |
| CCTCCTGTCCGTGTACTAGT+TGG | 0.516400 | 3_2:+75044896 | Msa0424780:CDS |
| GTTCATTTATCCTAGTCCAC+GGG | 0.521851 | 3_2:+75040225 | Msa0424780:CDS |
| GGACATTACTCTCCAAAATC+GGG | 0.523573 | 3_2:-75039466 | None:intergenic |
| CGTTTCCTCCTCCAAGCAAA+CGG | 0.523851 | 3_2:-75039666 | None:intergenic |
| CTTGATGGAAACTCCTTGAA+AGG | 0.524857 | 3_2:-75045196 | None:intergenic |
| ATTTACATGAAAGTGTGCTC+TGG | 0.524859 | 3_2:-75045569 | None:intergenic |
| ATGATTGTCCAGCGAAACGC+AGG | 0.526569 | 3_2:-75039538 | None:intergenic |
| CTGTTCTGGTTAGGAACTGT+AGG | 0.528092 | 3_2:+75045648 | Msa0424780:three_prime_UTR |
| CAATGGCACTTTGTAGAACT+GGG | 0.530134 | 3_2:+75039438 | Msa0424780:exon |
| TGGTAAAAGAGGAAGGGTGC+AGG | 0.532874 | 3_2:+75045030 | Msa0424780:CDS |
| ATCTGATAATATCCATCGAC+GGG | 0.535110 | 3_2:-75044173 | None:intergenic |
| GGTTCATTTATCCTAGTCCA+CGG | 0.538254 | 3_2:+75040224 | Msa0424780:CDS |
| CCGCCCTTCCGGCAATGAGG+AGG | 0.538522 | 3_2:+75045129 | Msa0424780:CDS |
| GTACATTTATCGTCAGCCTC+AGG | 0.540143 | 3_2:+75044233 | Msa0424780:CDS |
| AAGGGAAGAAGAGTATTGGA+TGG | 0.542115 | 3_2:-75039049 | None:intergenic |
| GTCAGAGACGAAGGAAAGGT+TGG | 0.543516 | 3_2:-75044960 | None:intergenic |
| TTCCAGCCTCAACTCTGTAT+GGG | 0.543666 | 3_2:-75040726 | None:intergenic |
| AGATACATACCCCGTGGACT+AGG | 0.544042 | 3_2:-75040235 | None:intergenic |
| AACATAATAAGAAAGAGAAT+AGG | 0.544411 | 3_2:+75038899 | Msa0424780:five_prime_UTR |
| TGAGGTGGTGTTTGAAGGCA+AGG | 0.544552 | 3_2:+75039853 | Msa0424780:CDS |
| CTAGTACACGGACAGGAGGT+TGG | 0.544865 | 3_2:-75044892 | None:intergenic |
| ACTTAACAGGTCGGTACACT+GGG | 0.545500 | 3_2:+75041506 | Msa0424780:intron |
| ATAACTCTTGTGTTATACAA+AGG | 0.547349 | 3_2:-75039974 | None:intergenic |
| GATTGTGTGTGGAACTTATG+TGG | 0.547710 | 3_2:+75045363 | Msa0424780:CDS |
| TTACTCTCCAAAATCGGGTA+TGG | 0.548971 | 3_2:-75039461 | None:intergenic |
| GACAAATCAAATATTTCAGG+GGG | 0.549563 | 3_2:-75045337 | None:intergenic |
| AATTTATATGCGAATAAGCT+AGG | 0.549847 | 3_2:-75039487 | None:intergenic |
| TGCCCATACAGAGTTGAGGC+TGG | 0.551335 | 3_2:+75040724 | Msa0424780:CDS |
| GTCGATGGATATTATCAGAT+GGG | 0.551619 | 3_2:+75044176 | Msa0424780:CDS |
| TAGAGGCTCTATGGAAAACA+TGG | 0.554608 | 3_2:+75041562 | Msa0424780:CDS |
| GATCAGCTCTCCTATTTACA+AGG | 0.554698 | 3_2:+75045419 | Msa0424780:CDS |
| TTCTTCGTCCAGTGCAAGAG+TGG | 0.555251 | 3_2:-75040458 | None:intergenic |
| TGAATAATATAGGAAGAAGA+AGG | 0.557377 | 3_2:-75039013 | None:intergenic |
| TTCAAGGTATTGAAGAAGCT+GGG | 0.558924 | 3_2:+75040125 | Msa0424780:intron |
| ATCTCGTTGCCTGCAAGTGG+TGG | 0.559120 | 3_2:+75040197 | Msa0424780:CDS |
| AAAGCCTCCTCATTGCCGGA+AGG | 0.559182 | 3_2:-75045133 | None:intergenic |
| ATGGCGAGTAGTCCCGTCGA+TGG | 0.559384 | 3_2:+75044161 | Msa0424780:CDS |
| AGGAAACGGATCATGTTATG+AGG | 0.560637 | 3_2:+75039681 | Msa0424780:CDS |
| TTGCCTGCAAGTGGTGGTAG+TGG | 0.560869 | 3_2:+75040203 | Msa0424780:CDS |
| TCGCAATTGCCTAGAAATTG+CGG | 0.561333 | 3_2:-75040518 | None:intergenic |
| CGTCGATGGATATTATCAGA+TGG | 0.561808 | 3_2:+75044175 | Msa0424780:CDS |
| GCTCTATGGAAAACATGGAC+AGG | 0.562416 | 3_2:+75041567 | Msa0424780:CDS |
| GAAGAATCTGTTAGGAAGGT+AGG | 0.562509 | 3_2:+75040475 | Msa0424780:CDS |
| GCATACCTTATTCTCCGAGA+AGG | 0.565490 | 3_2:-75043779 | None:intergenic |
| GACTGGCCTCATGACAAAGC+TGG | 0.565510 | 3_2:+75045010 | Msa0424780:CDS |
| ACCAGAACCAGAATGAGAAA+GGG | 0.566680 | 3_2:-75039067 | None:intergenic |
| ACAAAGCTGGTAAAAGAGGA+AGG | 0.567006 | 3_2:+75045023 | Msa0424780:CDS |
| GTTAATTACCTGCATAGTCA+TGG | 0.568531 | 3_2:+75040698 | Msa0424780:CDS |
| CCGACGCAAACTTGGCTGCA+GGG | 0.569318 | 3_2:-75045222 | None:intergenic |
| GTTGCGTGCTACAGAACGCC+GGG | 0.570077 | 3_2:-75038974 | None:intergenic |
| TTCAATGGAGTCGCATGAAG+AGG | 0.571118 | 3_2:+75039628 | Msa0424780:CDS |
| CACGGACAGGAGGTTGGCGA+AGG | 0.572597 | 3_2:-75044886 | None:intergenic |
| AAGCCTCCTCATTGCCGGAA+GGG | 0.572759 | 3_2:-75045132 | None:intergenic |
| TCTGTGTTACAAAGATGCAT+GGG | 0.575090 | 3_2:+75041684 | Msa0424780:intron |
| GGGCAAGACCATGACTATGC+AGG | 0.575441 | 3_2:-75040706 | None:intergenic |
| GCTGGACAATCATCAAATGC+AGG | 0.586031 | 3_2:+75039548 | Msa0424780:CDS |
| TTATACTAAGAGCTGGGAGA+CGG | 0.586602 | 3_2:+75045065 | Msa0424780:CDS |
| TCTCCAACTAGTACACGGAC+AGG | 0.586958 | 3_2:-75044899 | None:intergenic |
| CCTCCTCATTGCCGGAAGGG+CGG | 0.591041 | 3_2:-75045129 | None:intergenic |
| GCAGATGCTTGATAGGAACT+GGG | 0.593828 | 3_2:+75043715 | Msa0424780:intron |
| TGACAAATCAAATATTTCAG+GGG | 0.599665 | 3_2:-75045338 | None:intergenic |
| CTCCAATAAGTCAATGAAGT+GGG | 0.600928 | 3_2:-75044479 | None:intergenic |
| CAATGTCAGAGACGAAGGAA+AGG | 0.601326 | 3_2:-75044964 | None:intergenic |
| GGCGCCTATTGTATTGCACT+GGG | 0.603294 | 3_2:+75044846 | Msa0424780:CDS |
| CACTGCAATGCGTATTAGTG+AGG | 0.603654 | 3_2:+75044209 | Msa0424780:CDS |
| AGAATAGGAGATATTTAGGG+AGG | 0.605436 | 3_2:+75038914 | Msa0424780:five_prime_UTR |
| AAGGTTGCTCGTTCTTCGAG+GGG | 0.606778 | 3_2:+75045390 | Msa0424780:CDS |
| ATAAGCTGTCGCAAACATGA+AGG | 0.607676 | 3_2:-75043548 | None:intergenic |
| TTCATGTGTCCAGAACTGGC+TGG | 0.607798 | 3_2:+75044805 | Msa0424780:intron |
| GATTTGTCAAAGATTGTGTG+TGG | 0.608670 | 3_2:+75045352 | Msa0424780:CDS |
| TAACTTGCCATACCTTTGTG+AGG | 0.609041 | 3_2:-75041776 | None:intergenic |
| GGAGGCAGACGTTGACGCGG+TGG | 0.611176 | 3_2:+75038932 | Msa0424780:five_prime_UTR |
| GGACGAAGAATCTGTTAGGA+AGG | 0.614608 | 3_2:+75040471 | Msa0424780:CDS |
| TATATCTCGTTGCCTGCAAG+TGG | 0.614918 | 3_2:+75040194 | Msa0424780:CDS |
| TCTCCAATAAGTCAATGAAG+TGG | 0.615738 | 3_2:-75044480 | None:intergenic |
| CAGCTTATGATGGAAATCCT+CGG | 0.622225 | 3_2:+75043563 | Msa0424780:CDS |
| GAATCCAATGTCAGAGACGA+AGG | 0.623030 | 3_2:-75044969 | None:intergenic |
| CTCGCCATCTTGGCCCACAA+AGG | 0.624193 | 3_2:-75044146 | None:intergenic |
| GTGGAACTTATGTGGACTCA+AGG | 0.624300 | 3_2:+75045371 | Msa0424780:CDS |
| TGATGGAAACTCCTTGAAAG+GGG | 0.625886 | 3_2:-75045194 | None:intergenic |
| TAATATGCAGTTCTTCACTA+CGG | 0.627898 | 3_2:+75039588 | Msa0424780:CDS |
| CATCTGATAATATCCATCGA+CGG | 0.629067 | 3_2:-75044174 | None:intergenic |
| GTTCAAATCATTCCTCACAA+AGG | 0.633223 | 3_2:+75041764 | Msa0424780:CDS |
| GTCTTGCCCATACAGAGTTG+AGG | 0.635746 | 3_2:+75040720 | Msa0424780:CDS |
| TGATGATTGCATTTGACATG+AGG | 0.640141 | 3_2:+75041597 | Msa0424780:CDS |
| GAATCCTCATCCAAAGCCAA+AGG | 0.640345 | 3_2:+75044507 | Msa0424780:CDS |
| GGCTATCAGAGGTTTGACAA+TGG | 0.644633 | 3_2:+75039421 | Msa0424780:intron |
| GTTGACGCGGTGGAAACCCG+TGG | 0.645850 | 3_2:+75038942 | Msa0424780:five_prime_UTR |
| TTTGCTATAGGCGGATGAGG+TGG | 0.651791 | 3_2:+75039838 | Msa0424780:intron |
| ATTCCGCCCTTCCGGCAATG+AGG | 0.652081 | 3_2:+75045126 | Msa0424780:CDS |
| AGTTGCGTGCTACAGAACGC+CGG | 0.653048 | 3_2:-75038975 | None:intergenic |
| GCCTATTGTATTGCACTGGG+AGG | 0.658776 | 3_2:+75044849 | Msa0424780:CDS |
| ACCATCCTCGCAAAAGTCAG+CGG | 0.660725 | 3_2:-75041534 | None:intergenic |
| ACTATACACTGATATTACAA+AGG | 0.661664 | 3_2:-75045739 | None:intergenic |
| CAAAGCTGGTAAAAGAGGAA+GGG | 0.663205 | 3_2:+75045024 | Msa0424780:CDS |
| TGCAGGCAAGAGAAAGCACA+AGG | 0.672647 | 3_2:+75039565 | Msa0424780:CDS |
| AGTTCCCAAGCTCAGCGTCG+AGG | 0.673683 | 3_2:+75040013 | Msa0424780:CDS |
| TCGATGGATATTATCAGATG+GGG | 0.674719 | 3_2:+75044177 | Msa0424780:CDS |
| TAGGGAGGCAGACGTTGACG+CGG | 0.678964 | 3_2:+75038929 | Msa0424780:five_prime_UTR |
| ACGGACAGGAGGTTGGCGAA+GGG | 0.679588 | 3_2:-75044885 | None:intergenic |
| CCAACTAGTACACGGACAGG+AGG | 0.684433 | 3_2:-75044896 | None:intergenic |
| GATTTCATACCCGTCCACCA+AGG | 0.686883 | 3_2:-75039748 | None:intergenic |
| GCAAATCTCCAACTAGTACA+CGG | 0.688715 | 3_2:-75044904 | None:intergenic |
| CAGATGCTTGATAGGAACTG+GGG | 0.692383 | 3_2:+75043716 | Msa0424780:intron |
| GATTGTCCAGCGAAACGCAG+GGG | 0.700725 | 3_2:-75039536 | None:intergenic |
| TGATTGTCCAGCGAAACGCA+GGG | 0.710536 | 3_2:-75039537 | None:intergenic |
| GCGGAATGAGAGCCTCTCTG+AGG | 0.711146 | 3_2:-75045110 | None:intergenic |
| TTCATTTATCCTAGTCCACG+GGG | 0.719519 | 3_2:+75040226 | Msa0424780:CDS |
| AGCAAGACAATACCTCAGAG+AGG | 0.731039 | 3_2:+75045098 | Msa0424780:CDS |
| CATATGGAGAGTTTCTGCCG+AGG | 0.733805 | 3_2:-75043580 | None:intergenic |
| GTAGGAGAAGACACAACTGG+AGG | 0.772677 | 3_2:+75040493 | Msa0424780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr3_2:75039393-75039412 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTAATATT+TGG | + | chr3_2:75039400-75039419 | Msa0424780:intron | 0.0% |
| !! | AAAAAAAAAAAAAAAAAGGA+TGG | - | chr3_2:75039390-75039409 | None:intergenic | 10.0% |
| !!! | GTTAATATTGTATTTAATTT+TGG | + | chr3_2:75041795-75041814 | Msa0424780:intron | 10.0% |
| !!! | AAAATAAAATAATTTTGAGT+TGG | - | chr3_2:75042418-75042437 | None:intergenic | 10.0% |
| !!! | TGGATTAATTTTTTTAATTC+CGG | + | chr3_2:75039797-75039816 | Msa0424780:intron | 15.0% |
| !!! | TAAAAGTATAACTTTTTAGA+AGG | + | chr3_2:75041831-75041850 | Msa0424780:intron | 15.0% |
| !!! | TCATATTTAATTTATGTTTC+TGG | - | chr3_2:75042303-75042322 | None:intergenic | 15.0% |
| !!! | ATATTTTTGATGTTATCATA+AGG | + | chr3_2:75042846-75042865 | Msa0424780:intron | 15.0% |
| !!! | TATTTTTGATGTTATCATAA+GGG | + | chr3_2:75042847-75042866 | Msa0424780:intron | 15.0% |
| !! | TGAGAATAATACTAAATTAA+TGG | + | chr3_2:75043174-75043193 | Msa0424780:intron | 15.0% |
| !!! | TCATTATTTTATTACATTTC+CGG | + | chr3_2:75043276-75043295 | Msa0424780:intron | 15.0% |
| !! | AATATTTATTATGCTAATAC+CGG | - | chr3_2:75043298-75043317 | None:intergenic | 15.0% |
| !! | AAAAGTTATGAAAACAAAAA+TGG | - | chr3_2:75043674-75043693 | None:intergenic | 15.0% |
| !! | AAAAAAAATCATAAAGAGAA+GGG | + | chr3_2:75043938-75043957 | Msa0424780:intron | 15.0% |
| !! | AACATAATAAGAAAGAGAAT+AGG | + | chr3_2:75038899-75038918 | Msa0424780:five_prime_UTR | 20.0% |
| !!! | ATTAATTTTTTTAATTCCGG+TGG | + | chr3_2:75039800-75039819 | Msa0424780:intron | 20.0% |
| !! | AAGAATGATACAAAAGTTTA+CGG | - | chr3_2:75040154-75040173 | None:intergenic | 20.0% |
| !!! | ATTCATTACCTTGATATTTT+GGG | - | chr3_2:75041078-75041097 | None:intergenic | 20.0% |
| !!! | AATTCATTACCTTGATATTT+TGG | - | chr3_2:75041079-75041098 | None:intergenic | 20.0% |
| !!! | TTATACTTTTAAACAGTCAA+GGG | - | chr3_2:75041822-75041841 | None:intergenic | 20.0% |
| !! | GAAAAAGGAACAAATTATTT+AGG | - | chr3_2:75041953-75041972 | None:intergenic | 20.0% |
| !!! | CATTTTAGTGTTATTAATAG+CGG | + | chr3_2:75041998-75042017 | Msa0424780:intron | 20.0% |
| !! | AAAAATCTGATATGAGAAAT+AGG | + | chr3_2:75042044-75042063 | Msa0424780:intron | 20.0% |
| !! | AAAATCTGATATGAGAAATA+GGG | + | chr3_2:75042045-75042064 | Msa0424780:intron | 20.0% |
| !! | ATATATAAACCATCTTACAA+GGG | - | chr3_2:75042270-75042289 | None:intergenic | 20.0% |
| !! | TATATATAAACCATCTTACA+AGG | - | chr3_2:75042271-75042290 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTAAAGAAGACG+TGG | - | chr3_2:75042459-75042478 | None:intergenic | 20.0% |
| !! | ACTTTGTAAAATATTGACAT+TGG | + | chr3_2:75042522-75042541 | Msa0424780:intron | 20.0% |
| !! | ACTTTGTAAAATATTGGTAT+TGG | + | chr3_2:75042562-75042581 | Msa0424780:intron | 20.0% |
| !! | CTTTGTAAAAATATTGTCAT+TGG | - | chr3_2:75042698-75042717 | None:intergenic | 20.0% |
| !! | TTAAGGTTTAAATGTGTAAT+TGG | - | chr3_2:75042797-75042816 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATGATAA+TGG | - | chr3_2:75043128-75043147 | None:intergenic | 20.0% |
| !! | GGAAATGTAATAAAATAATG+AGG | - | chr3_2:75043277-75043296 | None:intergenic | 20.0% |
| !!! | CTATGATTATCTTTTAGTAT+TGG | - | chr3_2:75043391-75043410 | None:intergenic | 20.0% |
| !! | CAAAAAAAATCATAAAGAGA+AGG | + | chr3_2:75043937-75043956 | Msa0424780:intron | 20.0% |
| !! | CAAATGTAACCTTATTATTA+AGG | - | chr3_2:75044373-75044392 | None:intergenic | 20.0% |
| !!! | ATTAAAATTTGTGACTGTTT+TGG | - | chr3_2:75044755-75044774 | None:intergenic | 20.0% |
| !!! | GTATCAATGTTTTTATCTAA+AGG | - | chr3_2:75045280-75045299 | None:intergenic | 20.0% |
| !! | TTGACAAATCAAATATTTCA+GGG | - | chr3_2:75045342-75045361 | None:intergenic | 20.0% |
| !! | TTTGACAAATCAAATATTTC+AGG | - | chr3_2:75045343-75045362 | None:intergenic | 20.0% |
| ! | AAAGAGAATAGGAGATATTT+AGG | + | chr3_2:75038910-75038929 | Msa0424780:five_prime_UTR | 25.0% |
| ! | AAGAGAATAGGAGATATTTA+GGG | + | chr3_2:75038911-75038930 | Msa0424780:five_prime_UTR | 25.0% |
| ! | TGAATAATATAGGAAGAAGA+AGG | - | chr3_2:75039016-75039035 | None:intergenic | 25.0% |
| !!! | ATGGAGTTGATGAATAATAT+AGG | - | chr3_2:75039026-75039045 | None:intergenic | 25.0% |
| ! | TATCAGAAATGTTAATTCCT+TGG | - | chr3_2:75039163-75039182 | None:intergenic | 25.0% |
| ! | TACTGCAAAACTAAATGTAA+AGG | - | chr3_2:75039331-75039350 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTTGCAGTATTGA+TGG | + | chr3_2:75039335-75039354 | Msa0424780:intron | 25.0% |
| ! | ATTTATCAGCAAATATTCAG+AGG | - | chr3_2:75039363-75039382 | None:intergenic | 25.0% |
| !! | TTTTAATATTTGGCTATCAG+AGG | + | chr3_2:75039410-75039429 | Msa0424780:intron | 25.0% |
| ! | AATTTATATGCGAATAAGCT+AGG | - | chr3_2:75039490-75039509 | None:intergenic | 25.0% |
| ! | TAACTCTTGTGTTATACAAA+GGG | - | chr3_2:75039976-75039995 | None:intergenic | 25.0% |
| ! | ATAACTCTTGTGTTATACAA+AGG | - | chr3_2:75039977-75039996 | None:intergenic | 25.0% |
| ! | CAACAAAATATTGTGAAAAG+GGG | - | chr3_2:75040100-75040119 | None:intergenic | 25.0% |
| ! | CCAACAAAATATTGTGAAAA+GGG | - | chr3_2:75040101-75040120 | None:intergenic | 25.0% |
| ! | ACCAACAAAATATTGTGAAA+AGG | - | chr3_2:75040102-75040121 | None:intergenic | 25.0% |
| !! | ATATTTTGTTGGTATCTTCA+AGG | + | chr3_2:75040109-75040128 | Msa0424780:intron | 25.0% |
| !!! | GTTTTAACCTTAATGTTTTC+TGG | + | chr3_2:75040591-75040610 | Msa0424780:intron | 25.0% |
| ! | ACAATGGTTTATTTACTTTC+AGG | + | chr3_2:75040676-75040695 | Msa0424780:intron | 25.0% |
| !!! | TCATTTTTCTGTCTTTTATG+TGG | + | chr3_2:75040827-75040846 | Msa0424780:intron | 25.0% |
| ! | GAAAAGAATTATTACAGAGA+TGG | + | chr3_2:75041099-75041118 | Msa0424780:intron | 25.0% |
| ! | TTATTCAGTTAGAAACCATA+TGG | - | chr3_2:75041187-75041206 | None:intergenic | 25.0% |
| ! | ATATGTCATATGTTAGGTAT+CGG | - | chr3_2:75041333-75041352 | None:intergenic | 25.0% |
| !! | GAAAGTATATGTCATATGTT+AGG | - | chr3_2:75041339-75041358 | None:intergenic | 25.0% |
| ! | AACATATGACATATACTTTC+TGG | + | chr3_2:75041339-75041358 | Msa0424780:intron | 25.0% |
| ! | TATAATGGCAAAAATGGTAA+TGG | + | chr3_2:75041710-75041729 | Msa0424780:CDS | 25.0% |
| ! | ATAATGGCAAAAATGGTAAT+GGG | + | chr3_2:75041711-75041730 | Msa0424780:CDS | 25.0% |
| !! | TATACTTTTAAACAGTCAAG+GGG | - | chr3_2:75041821-75041840 | None:intergenic | 25.0% |
| !! | GTTATACTTTTAAACAGTCA+AGG | - | chr3_2:75041823-75041842 | None:intergenic | 25.0% |
| !!! | ACAATATTTTTACAAAGTGC+AGG | + | chr3_2:75042701-75042720 | Msa0424780:intron | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | + | chr3_2:75042702-75042721 | Msa0424780:intron | 25.0% |
| !!! | ACGTGACTTTCTTTTTTTTA+AGG | - | chr3_2:75042814-75042833 | None:intergenic | 25.0% |
| !!! | ATGAAGTGTTGTTAAATAAC+CGG | - | chr3_2:75043088-75043107 | None:intergenic | 25.0% |
| ! | ATTCTAACAAATATGTAGAC+AGG | + | chr3_2:75043441-75043460 | Msa0424780:intron | 25.0% |
| ! | ATCTGCGAGAAAATAATATA+AGG | - | chr3_2:75043701-75043720 | None:intergenic | 25.0% |
| ! | TTGCTAGCAATAAAGATAAA+AGG | - | chr3_2:75043754-75043773 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATGCTATTCA+TGG | - | chr3_2:75044035-75044054 | None:intergenic | 25.0% |
| ! | TATTATTAAGGAAAAACTCG+AGG | - | chr3_2:75044361-75044380 | None:intergenic | 25.0% |
| !! | CGAGTTTTTCCTTAATAATA+AGG | + | chr3_2:75044361-75044380 | Msa0424780:intron | 25.0% |
| !! | TTTTACTCATGAATTACCTT+TGG | - | chr3_2:75044526-75044545 | None:intergenic | 25.0% |
| ! | ATTGTAGAAGAAACAATACT+AGG | - | chr3_2:75044567-75044586 | None:intergenic | 25.0% |
| !!! | GTTTTGGTGATTGTTTTAAT+TGG | - | chr3_2:75044739-75044758 | None:intergenic | 25.0% |
| ! | ATGAATAATGGCATATAAGT+TGG | - | chr3_2:75044790-75044809 | None:intergenic | 25.0% |
| !!! | AGAAATTTTCTAGCAAGAAA+TGG | + | chr3_2:75045161-75045180 | Msa0424780:CDS | 25.0% |
| ! | TGACAAATCAAATATTTCAG+GGG | - | chr3_2:75045341-75045360 | None:intergenic | 25.0% |
| ! | TTTTCATTTCAATTTCGCCA+AGG | + | chr3_2:75039143-75039162 | Msa0424780:intron | 30.0% |
| ATTTACATTCACCACATCAA+TGG | - | chr3_2:75039238-75039257 | None:intergenic | 30.0% | |
| TAATATGCAGTTCTTCACTA+CGG | + | chr3_2:75039588-75039607 | Msa0424780:CDS | 30.0% | |
| GTTCAAAATGTCAGACTTTA+AGG | + | chr3_2:75039703-75039722 | Msa0424780:CDS | 30.0% | |
| !! | CATCGATTAAGTTTTGCTAT+AGG | + | chr3_2:75039826-75039845 | Msa0424780:intron | 30.0% |
| ! | CCCTTTTCACAATATTTTGT+TGG | + | chr3_2:75040098-75040117 | Msa0424780:intron | 30.0% |
| ! | AGTGGTTCTTTTTATGCAAA+GGG | - | chr3_2:75040339-75040358 | None:intergenic | 30.0% |
| ! | ACATTTTCCTTTCAGTATCA+TGG | + | chr3_2:75040379-75040398 | Msa0424780:intron | 30.0% |
| TTGATGAGAGATCTTCTAAT+TGG | + | chr3_2:75040553-75040572 | Msa0424780:CDS | 30.0% | |
| ATGTCTTCCAGAAAACATTA+AGG | - | chr3_2:75040601-75040620 | None:intergenic | 30.0% | |
| ! | AGGAGTGATATTTTCTACAA+TGG | + | chr3_2:75040660-75040679 | Msa0424780:intron | 30.0% |
| CTTTGATATGTCTGTCTATT+GGG | - | chr3_2:75040766-75040785 | None:intergenic | 30.0% | |
| ACTTTGATATGTCTGTCTAT+TGG | - | chr3_2:75040767-75040786 | None:intergenic | 30.0% | |
| ! | TGTTGCTAGTTTGAACATTT+CGG | + | chr3_2:75040946-75040965 | Msa0424780:intron | 30.0% |
| ! | CTTATCAGGTTTTCTATCTT+AGG | - | chr3_2:75040999-75041018 | None:intergenic | 30.0% |
| TGATAGAACCCAAAATATCA+AGG | + | chr3_2:75041067-75041086 | Msa0424780:intron | 30.0% | |
| AGTTAGAAACCATATGGTTT+GGG | - | chr3_2:75041181-75041200 | None:intergenic | 30.0% | |
| GGAAAATGACAGTTATATGA+AGG | - | chr3_2:75041241-75041260 | None:intergenic | 30.0% | |
| !! | GTTTGTTATATTTGCTGATG+TGG | - | chr3_2:75041277-75041296 | None:intergenic | 30.0% |
| ! | AACTCTATTTAGCACCTTTT+TGG | + | chr3_2:75041294-75041313 | Msa0424780:intron | 30.0% |
| ! | ACTCTATTTAGCACCTTTTT+GGG | + | chr3_2:75041295-75041314 | Msa0424780:intron | 30.0% |
| TATGTCATATGTTAGGTATC+GGG | - | chr3_2:75041332-75041351 | None:intergenic | 30.0% | |
| !! | AAGATGCATGGGTTTTATAA+TGG | + | chr3_2:75041695-75041714 | Msa0424780:intron | 30.0% |
| !! | GGGTTTTATAATGGCAAAAA+TGG | + | chr3_2:75041704-75041723 | Msa0424780:CDS | 30.0% |
| TTGAACTTTGCGAATATCAA+AGG | - | chr3_2:75041750-75041769 | None:intergenic | 30.0% | |
| AATATGCCTCATACAAACTA+AGG | + | chr3_2:75041927-75041946 | Msa0424780:intron | 30.0% | |
| TATTTATTTCAACCGCTTTG+TGG | - | chr3_2:75042098-75042117 | None:intergenic | 30.0% | |
| ! | CTAATTAACCTCTAACTTGT+AGG | - | chr3_2:75042175-75042194 | None:intergenic | 30.0% |
| !!! | ATAATTTTGAGTTGGTGATG+AGG | - | chr3_2:75042410-75042429 | None:intergenic | 30.0% |
| AAAATATTGACATTGGTCAC+TGG | + | chr3_2:75042529-75042548 | Msa0424780:intron | 30.0% | |
| GGTTGCACTTTGTAAAATAT+TGG | + | chr3_2:75042556-75042575 | Msa0424780:intron | 30.0% | |
| ACTTGGACAAATATTGGTAT+TGG | + | chr3_2:75042589-75042608 | Msa0424780:intron | 30.0% | |
| !! | CAAATATTGGTATTGGTACA+TGG | + | chr3_2:75042596-75042615 | Msa0424780:intron | 30.0% |
| AATACCAAAATACAAAGTGC+AGG | + | chr3_2:75042637-75042656 | Msa0424780:intron | 30.0% | |
| ATACCAAAATACAAAGTGCA+GGG | + | chr3_2:75042638-75042657 | Msa0424780:intron | 30.0% | |
| GCGAAATCACAATAACATAT+CGG | + | chr3_2:75042954-75042973 | Msa0424780:intron | 30.0% | |
| AACAACACTTCATTTATAGC+AGG | + | chr3_2:75043095-75043114 | Msa0424780:intron | 30.0% | |
| AAATTAATGGTTAAGTCACG+TGG | + | chr3_2:75043187-75043206 | Msa0424780:intron | 30.0% | |
| AAGTAAACTACTACAGATCA+TGG | - | chr3_2:75043213-75043232 | None:intergenic | 30.0% | |
| ATGATCTGTAGTAGTTTACT+TGG | + | chr3_2:75043212-75043231 | Msa0424780:intron | 30.0% | |
| TGATCTGTAGTAGTTTACTT+GGG | + | chr3_2:75043213-75043232 | Msa0424780:intron | 30.0% | |
| CTGATAATTCAAATTACACG+TGG | + | chr3_2:75043332-75043351 | Msa0424780:intron | 30.0% | |
| GAAACAAGTCACGATATATA+AGG | + | chr3_2:75043354-75043373 | Msa0424780:intron | 30.0% | |
| ATAGTTACCCTAACAAATGT+AGG | + | chr3_2:75043407-75043426 | Msa0424780:intron | 30.0% | |
| ! | CAACATACCTACATTTGTTA+GGG | - | chr3_2:75043417-75043436 | None:intergenic | 30.0% |
| TCAACATACCTACATTTGTT+AGG | - | chr3_2:75043418-75043437 | None:intergenic | 30.0% | |
| AAGATAAACAGCTCAATGTA+GGG | - | chr3_2:75043856-75043875 | None:intergenic | 30.0% | |
| !! | ACCAGCAATTTTTCAATCTT+GGG | - | chr3_2:75044074-75044093 | None:intergenic | 30.0% |
| TGAAATGTTCTACAGTTGTT+TGG | + | chr3_2:75044104-75044123 | Msa0424780:intron | 30.0% | |
| AAATGTCTTATATAAGCACC+AGG | - | chr3_2:75044313-75044332 | None:intergenic | 30.0% | |
| AAGTTCACAATTAATCCAAC+TGG | + | chr3_2:75044713-75044732 | Msa0424780:intron | 30.0% | |
| TAGTAGAGAATCAAAGTTGA+AGG | + | chr3_2:75044937-75044956 | Msa0424780:CDS | 30.0% | |
| TCTTCATTTATACTAAGAGC+TGG | + | chr3_2:75045058-75045077 | Msa0424780:CDS | 30.0% | |
| CTTCATTTATACTAAGAGCT+GGG | + | chr3_2:75045059-75045078 | Msa0424780:CDS | 30.0% | |
| GACAAATCAAATATTTCAGG+GGG | - | chr3_2:75045340-75045359 | None:intergenic | 30.0% | |
| !!! | TGTAGTTTTGTTGTTGCTAT+AGG | + | chr3_2:75045538-75045557 | Msa0424780:three_prime_UTR | 30.0% |
| GCATTTCAGATAACTAAGTT+TGG | - | chr3_2:75045614-75045633 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAGAAGTCTGTTC+TGG | + | chr3_2:75045634-75045653 | Msa0424780:three_prime_UTR | 30.0% |
| AGAATAGGAGATATTTAGGG+AGG | + | chr3_2:75038914-75038933 | Msa0424780:five_prime_UTR | 35.0% | |
| AGGACATTACTCTCCAAAAT+CGG | - | chr3_2:75039470-75039489 | None:intergenic | 35.0% | |
| CGCATATAAATTTGTCGACA+AGG | + | chr3_2:75039498-75039517 | Msa0424780:CDS | 35.0% | |
| !! | GTTTTAGATCGTGTTAGCAT+TGG | + | chr3_2:75039725-75039744 | Msa0424780:CDS | 35.0% |
| !! | CGATTAAGTTTTGCTATAGG+CGG | + | chr3_2:75039829-75039848 | Msa0424780:intron | 35.0% |
| AGATAATTCTTTGTCCGTTC+AGG | + | chr3_2:75039895-75039914 | Msa0424780:intron | 35.0% | |
| AACTCATCATGTAACCTGAA+CGG | - | chr3_2:75039912-75039931 | None:intergenic | 35.0% | |
| !! | TTCAAGGTATTGAAGAAGCT+GGG | + | chr3_2:75040125-75040144 | Msa0424780:intron | 35.0% |
| TCTTACTCAATGCAAGTTCA+TGG | + | chr3_2:75040170-75040189 | Msa0424780:CDS | 35.0% | |
| AAATAGACAACATTCAGAGC+AGG | - | chr3_2:75040304-75040323 | None:intergenic | 35.0% | |
| ! | GTGGTTCTTTTTATGCAAAG+GGG | - | chr3_2:75040338-75040357 | None:intergenic | 35.0% |
| ! | CAGTGGTTCTTTTTATGCAA+AGG | - | chr3_2:75040340-75040359 | None:intergenic | 35.0% |
| ! | AGAACCACTGATGTTCTTTT+TGG | + | chr3_2:75040350-75040369 | Msa0424780:intron | 35.0% |
| AAAACTGCCATGATACTGAA+AGG | - | chr3_2:75040389-75040408 | None:intergenic | 35.0% | |
| !! | AGATTGGCTTCAAACTTTAG+AGG | + | chr3_2:75040435-75040454 | Msa0424780:CDS | 35.0% |
| GTTAATTACCTGCATAGTCA+TGG | + | chr3_2:75040698-75040717 | Msa0424780:CDS | 35.0% | |
| TGATGTACAAAACCTTCTCT+GGG | - | chr3_2:75040881-75040900 | None:intergenic | 35.0% | |
| !!! | ACTTTTGCTCTGGGATTATA+GGG | - | chr3_2:75041129-75041148 | None:intergenic | 35.0% |
| !!! | AACTTTTGCTCTGGGATTAT+AGG | - | chr3_2:75041130-75041149 | None:intergenic | 35.0% |
| AGAGAAATGTCTCTTCTCTA+AGG | - | chr3_2:75041153-75041172 | None:intergenic | 35.0% | |
| CAGTTAGAAACCATATGGTT+TGG | - | chr3_2:75041182-75041201 | None:intergenic | 35.0% | |
| ATGACAGTTATATGAAGGAC+AGG | - | chr3_2:75041236-75041255 | None:intergenic | 35.0% | |
| !!! | TTCTGGTTGATGATTTTCAC+TGG | + | chr3_2:75041356-75041375 | Msa0424780:intron | 35.0% |
| !!! | TCTGGTTGATGATTTTCACT+GGG | + | chr3_2:75041357-75041376 | Msa0424780:intron | 35.0% |
| AGTTACTGTACACCAATAGT+TGG | + | chr3_2:75041421-75041440 | Msa0424780:intron | 35.0% | |
| ! | ACCTGAAGTGTTTACTTAAC+AGG | + | chr3_2:75041493-75041512 | Msa0424780:intron | 35.0% |
| ACCTGTTAAGTAAACACTTC+AGG | - | chr3_2:75041497-75041516 | None:intergenic | 35.0% | |
| ! | GAAGTGTTTACTTAACAGGT+CGG | + | chr3_2:75041497-75041516 | Msa0424780:intron | 35.0% |
| TGATGATTGCATTTGACATG+AGG | + | chr3_2:75041597-75041616 | Msa0424780:CDS | 35.0% | |
| ATTGCATTTGACATGAGGTA+TGG | + | chr3_2:75041602-75041621 | Msa0424780:intron | 35.0% | |
| AACTTCACAAACGATATCCT+AGG | - | chr3_2:75041628-75041647 | None:intergenic | 35.0% | |
| ATCTGTGTTACAAAGATGCA+TGG | + | chr3_2:75041683-75041702 | Msa0424780:intron | 35.0% | |
| TCTGTGTTACAAAGATGCAT+GGG | + | chr3_2:75041684-75041703 | Msa0424780:intron | 35.0% | |
| GTTCAAATCATTCCTCACAA+AGG | + | chr3_2:75041764-75041783 | Msa0424780:CDS | 35.0% | |
| AATCATTCCTCACAAAGGTA+TGG | + | chr3_2:75041769-75041788 | Msa0424780:intron | 35.0% | |
| ! | GTCTATAAAGCATTTGAGTC+AGG | - | chr3_2:75041871-75041890 | None:intergenic | 35.0% |
| AAATGCTTTATAGACCGTGA+AGG | + | chr3_2:75041876-75041895 | Msa0424780:intron | 35.0% | |
| !! | TTTAGGCCTTAGTTTGTATG+AGG | - | chr3_2:75041936-75041955 | None:intergenic | 35.0% |
| !! | TCTAACTTGTAGGCTTTTGA+GGG | - | chr3_2:75042165-75042184 | None:intergenic | 35.0% |
| CAAGTTAGAGGTTAATTAGC+AGG | + | chr3_2:75042176-75042195 | Msa0424780:intron | 35.0% | |
| AACCGATTGTCTTAGATGTA+AGG | + | chr3_2:75042239-75042258 | Msa0424780:intron | 35.0% | |
| ACCGATTGTCTTAGATGTAA+GGG | + | chr3_2:75042240-75042259 | Msa0424780:intron | 35.0% | |
| ! | ACCCTTACATCTAAGACAAT+CGG | - | chr3_2:75042244-75042263 | None:intergenic | 35.0% |
| GAAGTGAAGAGAAAAGATAG+AGG | + | chr3_2:75042328-75042347 | Msa0424780:intron | 35.0% | |
| TTTATATAACCCCACAACCT+AGG | - | chr3_2:75042381-75042400 | None:intergenic | 35.0% | |
| !! | ATATTGGTATTGGTTGCACT+TGG | + | chr3_2:75042572-75042591 | Msa0424780:intron | 35.0% |
| GTACATGGCATGAAATGATT+GGG | + | chr3_2:75042611-75042630 | Msa0424780:intron | 35.0% | |
| GTTGCACTTTGTATATTGGT+AGG | - | chr3_2:75042665-75042684 | None:intergenic | 35.0% | |
| CTTGGTTGCACTTTGTATAT+TGG | - | chr3_2:75042669-75042688 | None:intergenic | 35.0% | |
| CAATATACAAAGTGCAACCA+AGG | + | chr3_2:75042667-75042686 | Msa0424780:intron | 35.0% | |
| TATTGTCATGCACTTTACCT+TGG | - | chr3_2:75042687-75042706 | None:intergenic | 35.0% | |
| !! | CTTTCAACAGATTTTGGCAT+TGG | - | chr3_2:75042766-75042785 | None:intergenic | 35.0% |
| ! | CTTGCACTTTCAACAGATTT+TGG | - | chr3_2:75042772-75042791 | None:intergenic | 35.0% |
| ! | CAAAATCTGTTGAAAGTGCA+AGG | + | chr3_2:75042770-75042789 | Msa0424780:intron | 35.0% |
| ! | AGCAGTGACTTTTTGCATAT+CGG | - | chr3_2:75042922-75042941 | None:intergenic | 35.0% |
| CAAATTCCGAGATGTAATAG+CGG | + | chr3_2:75043047-75043066 | Msa0424780:intron | 35.0% | |
| ACTTGGGAAAGACTATTTGT+AGG | + | chr3_2:75043229-75043248 | Msa0424780:intron | 35.0% | |
| ATTTGTAGGTCTACTGTAAG+TGG | + | chr3_2:75043243-75043262 | Msa0424780:intron | 35.0% | |
| TTCTTGCCACATTAAACTTC+AGG | + | chr3_2:75043517-75043536 | Msa0424780:intron | 35.0% | |
| TCTTGCCACATTAAACTTCA+GGG | + | chr3_2:75043518-75043537 | Msa0424780:intron | 35.0% | |
| AGATAAACAGCTCAATGTAG+GGG | - | chr3_2:75043855-75043874 | None:intergenic | 35.0% | |
| CAAGATAAACAGCTCAATGT+AGG | - | chr3_2:75043857-75043876 | None:intergenic | 35.0% | |
| CTACATTGAGCTGTTTATCT+TGG | + | chr3_2:75043855-75043874 | Msa0424780:intron | 35.0% | |
| ! | TCAAGTTTCTTTGGTCTTTC+AGG | + | chr3_2:75043962-75043981 | Msa0424780:intron | 35.0% |
| ACCCAAGATTGAAAAATTGC+TGG | + | chr3_2:75044070-75044089 | Msa0424780:intron | 35.0% | |
| !! | CACCAGCAATTTTTCAATCT+TGG | - | chr3_2:75044075-75044094 | None:intergenic | 35.0% |
| CAACTGTAGAACATTTCACA+TGG | - | chr3_2:75044102-75044121 | None:intergenic | 35.0% | |
| ATCTGATAATATCCATCGAC+GGG | - | chr3_2:75044176-75044195 | None:intergenic | 35.0% | |
| CATCTGATAATATCCATCGA+CGG | - | chr3_2:75044177-75044196 | None:intergenic | 35.0% | |
| GTCGATGGATATTATCAGAT+GGG | + | chr3_2:75044176-75044195 | Msa0424780:CDS | 35.0% | |
| TCGATGGATATTATCAGATG+GGG | + | chr3_2:75044177-75044196 | Msa0424780:CDS | 35.0% | |
| !! | TCTGTTACATTTTGAGTACC+TGG | + | chr3_2:75044292-75044311 | Msa0424780:intron | 35.0% |
| !!! | TTTCTATGTTTTAGCGCAGT+AGG | + | chr3_2:75044452-75044471 | Msa0424780:intron | 35.0% |
| CTCCAATAAGTCAATGAAGT+GGG | - | chr3_2:75044482-75044501 | None:intergenic | 35.0% | |
| TCTCCAATAAGTCAATGAAG+TGG | - | chr3_2:75044483-75044502 | None:intergenic | 35.0% | |
| ! | TCATGAATTACCTTTGGCTT+TGG | - | chr3_2:75044520-75044539 | None:intergenic | 35.0% |
| AAAGAATGGTTTAGGCTCTT+GGG | - | chr3_2:75044644-75044663 | None:intergenic | 35.0% | |
| !!! | GATTGTTTTAATTGGCCAGT+TGG | - | chr3_2:75044731-75044750 | None:intergenic | 35.0% |
| !! | AGTTCTGGACACATGAATAA+TGG | - | chr3_2:75044802-75044821 | None:intergenic | 35.0% |
| ATTATTCATGTGTCCAGAAC+TGG | + | chr3_2:75044801-75044820 | Msa0424780:intron | 35.0% | |
| ATTGGATTCTCAGTCATGAT+TGG | + | chr3_2:75044983-75045002 | Msa0424780:CDS | 35.0% | |
| GAGAAAAATAACCCCTTTCA+AGG | + | chr3_2:75045183-75045202 | Msa0424780:CDS | 35.0% | |
| TTGATGGAAACTCCTTGAAA+GGG | - | chr3_2:75045198-75045217 | None:intergenic | 35.0% | |
| GATTTGTCAAAGATTGTGTG+TGG | + | chr3_2:75045352-75045371 | Msa0424780:CDS | 35.0% | |
| CCACAAAAGACCTTGTAAAT+AGG | - | chr3_2:75045432-75045451 | None:intergenic | 35.0% | |
| ! | CCTATTTACAAGGTCTTTTG+TGG | + | chr3_2:75045429-75045448 | Msa0424780:CDS | 35.0% |
| ! | ATTTACATGAAAGTGTGCTC+TGG | - | chr3_2:75045572-75045591 | None:intergenic | 35.0% |
| !!! | GGAACTGTAGGCATTTTTTT+TGG | + | chr3_2:75045660-75045679 | Msa0424780:three_prime_UTR | 35.0% |
| !!! | CTGTAGGCATTTTTTTTGGA+TGG | + | chr3_2:75045664-75045683 | Msa0424780:three_prime_UTR | 35.0% |
| !! | GAAGAGTATTGGATGGAACA+TGG | - | chr3_2:75039045-75039064 | None:intergenic | 40.0% |
| !! | AAGGGAAGAAGAGTATTGGA+TGG | - | chr3_2:75039052-75039071 | None:intergenic | 40.0% |
| ! | GAGAAAGGGAAGAAGAGTAT+TGG | - | chr3_2:75039056-75039075 | None:intergenic | 40.0% |
| TCTTCTTCCCTTTCTCATTC+TGG | + | chr3_2:75039060-75039079 | Msa0424780:five_prime_UTR | 40.0% | |
| ACCAGAACCAGAATGAGAAA+GGG | - | chr3_2:75039070-75039089 | None:intergenic | 40.0% | |
| ACAATGGCACTTTGTAGAAC+TGG | + | chr3_2:75039437-75039456 | Msa0424780:exon | 40.0% | |
| CAATGGCACTTTGTAGAACT+GGG | + | chr3_2:75039438-75039457 | Msa0424780:exon | 40.0% | |
| TTACTCTCCAAAATCGGGTA+TGG | - | chr3_2:75039464-75039483 | None:intergenic | 40.0% | |
| GGACATTACTCTCCAAAATC+GGG | - | chr3_2:75039469-75039488 | None:intergenic | 40.0% | |
| ATCTGCATCTGCTTCTTCAA+TGG | + | chr3_2:75039613-75039632 | Msa0424780:CDS | 40.0% | |
| AGGAAACGGATCATGTTATG+AGG | + | chr3_2:75039681-75039700 | Msa0424780:CDS | 40.0% | |
| ACTTTACGATGTGTCATGAC+TGG | + | chr3_2:75039777-75039796 | Msa0424780:intron | 40.0% | |
| AACTTAATCGATGAGACCAC+CGG | - | chr3_2:75039819-75039838 | None:intergenic | 40.0% | |
| !! | CTTCAAGGTATTGAAGAAGC+TGG | + | chr3_2:75040124-75040143 | Msa0424780:intron | 40.0% |
| GGTTCATTTATCCTAGTCCA+CGG | + | chr3_2:75040224-75040243 | Msa0424780:CDS | 40.0% | |
| GTTCATTTATCCTAGTCCAC+GGG | + | chr3_2:75040225-75040244 | Msa0424780:CDS | 40.0% | |
| TTCATTTATCCTAGTCCACG+GGG | + | chr3_2:75040226-75040245 | Msa0424780:CDS | 40.0% | |
| TGAGCCAAAAAGAACATCAG+TGG | - | chr3_2:75040357-75040376 | None:intergenic | 40.0% | |
| !!! | GCAGTTTTTCTTTGAGACAC+TGG | + | chr3_2:75040401-75040420 | Msa0424780:CDS | 40.0% |
| GAAGAATCTGTTAGGAAGGT+AGG | + | chr3_2:75040475-75040494 | Msa0424780:CDS | 40.0% | |
| TCGCAATTGCCTAGAAATTG+CGG | - | chr3_2:75040521-75040540 | None:intergenic | 40.0% | |
| TGCAAGTATTCAAGCACTTG+TGG | - | chr3_2:75040630-75040649 | None:intergenic | 40.0% | |
| AATACTTGCACAGCAACATG+AGG | + | chr3_2:75040640-75040659 | Msa0424780:intron | 40.0% | |
| ! | TCTGTCTTTTATGTGGAGTG+TGG | + | chr3_2:75040834-75040853 | Msa0424780:intron | 40.0% |
| GTGATGTACAAAACCTTCTC+TGG | - | chr3_2:75040882-75040901 | None:intergenic | 40.0% | |
| AGTCTGTTGCACTTCTTATC+AGG | - | chr3_2:75041013-75041032 | None:intergenic | 40.0% | |
| ! | TAAGAAGTGCAACAGACTGT+AGG | + | chr3_2:75041015-75041034 | Msa0424780:intron | 40.0% |
| !! | CTCTAAGGAACTTTTGCTCT+GGG | - | chr3_2:75041138-75041157 | None:intergenic | 40.0% |
| !! | TCTCTAAGGAACTTTTGCTC+TGG | - | chr3_2:75041139-75041158 | None:intergenic | 40.0% |
| !! | TTTAGCACCTTTTTGGGCTT+AGG | + | chr3_2:75041301-75041320 | Msa0424780:intron | 40.0% |
| CATGAGGAAACACCAACTAT+TGG | - | chr3_2:75041436-75041455 | None:intergenic | 40.0% | |
| TCAACCTTTCTTCTCATGCT+TGG | + | chr3_2:75041466-75041485 | Msa0424780:intron | 40.0% | |
| CAAACCAAGCATGAGAAGAA+AGG | - | chr3_2:75041473-75041492 | None:intergenic | 40.0% | |
| TGGTTCAAATAGAGGCTCTA+TGG | + | chr3_2:75041553-75041572 | Msa0424780:CDS | 40.0% | |
| TAGAGGCTCTATGGAAAACA+TGG | + | chr3_2:75041562-75041581 | Msa0424780:CDS | 40.0% | |
| !! | AATGGTAATGGGAGAGCTTA+TGG | + | chr3_2:75041722-75041741 | Msa0424780:CDS | 40.0% |
| ! | TAACTTGCCATACCTTTGTG+AGG | - | chr3_2:75041779-75041798 | None:intergenic | 40.0% |
| GAGGCATATTAGAGACAAGA+AGG | - | chr3_2:75041917-75041936 | None:intergenic | 40.0% | |
| TACTCACAGCTTACAGCAAA+GGG | - | chr3_2:75041976-75041995 | None:intergenic | 40.0% | |
| ATACTCACAGCTTACAGCAA+AGG | - | chr3_2:75041977-75041996 | None:intergenic | 40.0% | |
| !! | GTGTTATTAATAGCGGATCG+CGG | + | chr3_2:75042005-75042024 | Msa0424780:intron | 40.0% |
| AAATAGCAGTAGCCACAAAG+CGG | + | chr3_2:75042083-75042102 | Msa0424780:intron | 40.0% | |
| !! | CTCTAACTTGTAGGCTTTTG+AGG | - | chr3_2:75042166-75042185 | None:intergenic | 40.0% |
| CTCAAAAGCCTACAAGTTAG+AGG | + | chr3_2:75042164-75042183 | Msa0424780:intron | 40.0% | |
| AAGAGAAAAGATAGAGGCAG+AGG | + | chr3_2:75042334-75042353 | Msa0424780:intron | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr3_2:75042361-75042380 | Msa0424780:intron | 40.0% | |
| ATGCACTTTCAACTGAGCAT+TGG | + | chr3_2:75042485-75042504 | Msa0424780:intron | 40.0% | |
| GGTTGCACTTGGACAAATAT+TGG | + | chr3_2:75042583-75042602 | Msa0424780:intron | 40.0% | |
| GGTACATGGCATGAAATGAT+TGG | + | chr3_2:75042610-75042629 | Msa0424780:intron | 40.0% | |
| AAAAGTCACTGCTATTGCAG+TGG | + | chr3_2:75042929-75042948 | Msa0424780:intron | 40.0% | |
| !!! | TAACATATCGGCTTTTGTCG+CGG | + | chr3_2:75042966-75042985 | Msa0424780:intron | 40.0% |
| CAAATCCCGAGATGTAATAG+CGG | + | chr3_2:75042995-75043014 | Msa0424780:intron | 40.0% | |
| CTATACCGCTATTACATCTC+GGG | - | chr3_2:75043003-75043022 | None:intergenic | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_2:75043004-75043023 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_2:75043002-75043021 | Msa0424780:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_2:75043003-75043022 | Msa0424780:intron | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_2:75043004-75043023 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_2:75043002-75043021 | Msa0424780:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_2:75043003-75043022 | Msa0424780:intron | 40.0% | |
| GGTGTACTTCAAACGTAAGT+CGG | + | chr3_2:75043462-75043481 | Msa0424780:intron | 40.0% | |
| GTGTACTTCAAACGTAAGTC+GGG | + | chr3_2:75043463-75043482 | Msa0424780:intron | 40.0% | |
| CTTGCCACATTAAACTTCAG+GGG | + | chr3_2:75043519-75043538 | Msa0424780:intron | 40.0% | |
| CATTCCCCTGAAGTTTAATG+TGG | - | chr3_2:75043526-75043545 | None:intergenic | 40.0% | |
| ATAAGCTGTCGCAAACATGA+AGG | - | chr3_2:75043551-75043570 | None:intergenic | 40.0% | |
| ATGTTTGCGACAGCTTATGA+TGG | + | chr3_2:75043553-75043572 | Msa0424780:CDS | 40.0% | |
| ! | CAGCTTATGATGGAAATCCT+CGG | + | chr3_2:75043563-75043582 | Msa0424780:CDS | 40.0% |
| AACTCTCCATATGGAAATGC+TGG | + | chr3_2:75043590-75043609 | Msa0424780:CDS | 40.0% | |
| TGTAAGCCAGCATTTCCATA+TGG | - | chr3_2:75043599-75043618 | None:intergenic | 40.0% | |
| ! | TTTTCTCGCAGATGCTTGAT+AGG | + | chr3_2:75043708-75043727 | Msa0424780:intron | 40.0% |
| ! | GAGAAGGGTTCAAGTTTCTT+TGG | + | chr3_2:75043953-75043972 | Msa0424780:intron | 40.0% |
| ! | AGTTTCTTTGGTCTTTCAGG+AGG | + | chr3_2:75043965-75043984 | Msa0424780:intron | 40.0% |
| ACAGTTGTTTGGATGCTCTA+AGG | + | chr3_2:75044115-75044134 | Msa0424780:intron | 40.0% | |
| CGTCGATGGATATTATCAGA+TGG | + | chr3_2:75044175-75044194 | Msa0424780:CDS | 40.0% | |
| GATATTATCAGATGGGGTCT+AGG | + | chr3_2:75044183-75044202 | Msa0424780:CDS | 40.0% | |
| TGTCCTTAGATGAATACCTG+AGG | - | chr3_2:75044252-75044271 | None:intergenic | 40.0% | |
| CAGAAACACATTGCGTGTAT+GGG | - | chr3_2:75044276-75044295 | None:intergenic | 40.0% | |
| ACAGAAACACATTGCGTGTA+TGG | - | chr3_2:75044277-75044296 | None:intergenic | 40.0% | |
| !! | TGCCCACTTCATTGACTTAT+TGG | + | chr3_2:75044477-75044496 | Msa0424780:CDS | 40.0% |
| !! | ATTACCTTTGGCTTTGGATG+AGG | - | chr3_2:75044514-75044533 | None:intergenic | 40.0% |
| GAAAGAATGGTTTAGGCTCT+TGG | - | chr3_2:75044645-75044664 | None:intergenic | 40.0% | |
| AGCCTAAACCATTCTTTCCA+TGG | + | chr3_2:75044647-75044666 | Msa0424780:intron | 40.0% | |
| AGCCATGGAAAGAATGGTTT+AGG | - | chr3_2:75044652-75044671 | None:intergenic | 40.0% | |
| ATTGACAGCCATGGAAAGAA+TGG | - | chr3_2:75044658-75044677 | None:intergenic | 40.0% | |
| GCAAATCTCCAACTAGTACA+CGG | - | chr3_2:75044907-75044926 | None:intergenic | 40.0% | |
| ! | ATTCTCAGTCATGATTGGTC+AGG | + | chr3_2:75044988-75045007 | Msa0424780:CDS | 40.0% |
| !! | CTTTTACCAGCTTTGTCATG+AGG | - | chr3_2:75045019-75045038 | None:intergenic | 40.0% |
| CATGACAAAGCTGGTAAAAG+AGG | + | chr3_2:75045019-75045038 | Msa0424780:CDS | 40.0% | |
| ACAAAGCTGGTAAAAGAGGA+AGG | + | chr3_2:75045023-75045042 | Msa0424780:CDS | 40.0% | |
| CAAAGCTGGTAAAAGAGGAA+GGG | + | chr3_2:75045024-75045043 | Msa0424780:CDS | 40.0% | |
| TTATACTAAGAGCTGGGAGA+CGG | + | chr3_2:75045065-75045084 | Msa0424780:CDS | 40.0% | |
| TGATGGAAACTCCTTGAAAG+GGG | - | chr3_2:75045197-75045216 | None:intergenic | 40.0% | |
| CTTGATGGAAACTCCTTGAA+AGG | - | chr3_2:75045199-75045218 | None:intergenic | 40.0% | |
| GATTGTGTGTGGAACTTATG+TGG | + | chr3_2:75045363-75045382 | Msa0424780:CDS | 40.0% | |
| GATCAGCTCTCCTATTTACA+AGG | + | chr3_2:75045419-75045438 | Msa0424780:CDS | 40.0% | |
| ! | TCAAGAAGTCTGTTCTGGTT+AGG | + | chr3_2:75045639-75045658 | Msa0424780:three_prime_UTR | 40.0% |
| !! | TCCCTTTCTCATTCTGGTTC+TGG | + | chr3_2:75039066-75039085 | Msa0424780:five_prime_UTR | 45.0% |
| CACCAGAACCAGAATGAGAA+AGG | - | chr3_2:75039071-75039090 | None:intergenic | 45.0% | |
| CTCTGTATGCACCATTGATG+TGG | + | chr3_2:75039224-75039243 | Msa0424780:intron | 45.0% | |
| GGCTATCAGAGGTTTGACAA+TGG | + | chr3_2:75039421-75039440 | Msa0424780:intron | 45.0% | |
| GCTGGACAATCATCAAATGC+AGG | + | chr3_2:75039548-75039567 | Msa0424780:CDS | 45.0% | |
| TTCAATGGAGTCGCATGAAG+AGG | + | chr3_2:75039628-75039647 | Msa0424780:CDS | 45.0% | |
| AAGCAAACGGAAGAGGTCTT+TGG | - | chr3_2:75039656-75039675 | None:intergenic | 45.0% | |
| AAAGACCTCTTCCGTTTGCT+TGG | + | chr3_2:75039655-75039674 | Msa0424780:CDS | 45.0% | |
| !! | AGTTTTGCTATAGGCGGATG+AGG | + | chr3_2:75039835-75039854 | Msa0424780:intron | 45.0% |
| GGTGTTTGAAGGCAAGGTTA+AGG | + | chr3_2:75039859-75039878 | Msa0424780:CDS | 45.0% | |
| GCAAGGTTAAGGACAGTGTT+AGG | + | chr3_2:75039870-75039889 | Msa0424780:CDS | 45.0% | |
| TCGAGGAAAACGAGCAATAG+AGG | + | chr3_2:75040030-75040049 | Msa0424780:CDS | 45.0% | |
| TATATCTCGTTGCCTGCAAG+TGG | + | chr3_2:75040194-75040213 | Msa0424780:CDS | 45.0% | |
| ! | ACTGGCTTCAACAGTCAGAT+TGG | + | chr3_2:75040419-75040438 | Msa0424780:CDS | 45.0% |
| CACTGGACGAAGAATCTGTT+AGG | + | chr3_2:75040467-75040486 | Msa0424780:CDS | 45.0% | |
| GGACGAAGAATCTGTTAGGA+AGG | + | chr3_2:75040471-75040490 | Msa0424780:CDS | 45.0% | |
| AAGGTAGGAGAAGACACAAC+TGG | + | chr3_2:75040490-75040509 | Msa0424780:CDS | 45.0% | |
| CGCAATTGCCTAGAAATTGC+GGG | - | chr3_2:75040520-75040539 | None:intergenic | 45.0% | |
| TTCCAGCCTCAACTCTGTAT+GGG | - | chr3_2:75040729-75040748 | None:intergenic | 45.0% | |
| TTTCCAGCCTCAACTCTGTA+TGG | - | chr3_2:75040730-75040749 | None:intergenic | 45.0% | |
| AAGTGCAACAGACTGTAGGA+AGG | + | chr3_2:75041019-75041038 | Msa0424780:intron | 45.0% | |
| AGTGCAACAGACTGTAGGAA+GGG | + | chr3_2:75041020-75041039 | Msa0424780:intron | 45.0% | |
| AGGACAGGTGTAGCAAAAGA+AGG | - | chr3_2:75041221-75041240 | None:intergenic | 45.0% | |
| !! | TGATGTGGCTAGTTTCTTGG+AGG | - | chr3_2:75041262-75041281 | None:intergenic | 45.0% |
| !! | TGCTGATGTGGCTAGTTTCT+TGG | - | chr3_2:75041265-75041284 | None:intergenic | 45.0% |
| !! | CATATGTTAGGTATCGGGCT+AGG | - | chr3_2:75041327-75041346 | None:intergenic | 45.0% |
| CATGAGAAGAAAGGTTGACC+AGG | - | chr3_2:75041464-75041483 | None:intergenic | 45.0% | |
| TACTTAACAGGTCGGTACAC+TGG | + | chr3_2:75041505-75041524 | Msa0424780:intron | 45.0% | |
| ACTTAACAGGTCGGTACACT+GGG | + | chr3_2:75041506-75041525 | Msa0424780:intron | 45.0% | |
| TGCGAGGATGGTTCAAATAG+AGG | + | chr3_2:75041545-75041564 | Msa0424780:CDS | 45.0% | |
| GCTCTATGGAAAACATGGAC+AGG | + | chr3_2:75041567-75041586 | Msa0424780:CDS | 45.0% | |
| TTTGACATGAGGTATGGCCT+AGG | + | chr3_2:75041608-75041627 | Msa0424780:intron | 45.0% | |
| GCTTACAGCAAAGGGGAAAA+AGG | - | chr3_2:75041968-75041987 | None:intergenic | 45.0% | |
| ACTCACAGCTTACAGCAAAG+GGG | - | chr3_2:75041975-75041994 | None:intergenic | 45.0% | |
| AAGGGTCAACCCTTGTAAGA+TGG | + | chr3_2:75042258-75042277 | Msa0424780:intron | 45.0% | |
| AGAAAAGATAGAGGCAGAGG+CGG | + | chr3_2:75042337-75042356 | Msa0424780:intron | 45.0% | |
| ATGAGAGGTTACCTAGGTTG+TGG | + | chr3_2:75042367-75042386 | Msa0424780:intron | 45.0% | |
| TGAGAGGTTACCTAGGTTGT+GGG | + | chr3_2:75042368-75042387 | Msa0424780:intron | 45.0% | |
| !! | TTTGAGTTGGTGATGAGGTG+AGG | - | chr3_2:75042405-75042424 | None:intergenic | 45.0% |
| TTGACATTGGTCACTGGCAT+TGG | + | chr3_2:75042535-75042554 | Msa0424780:intron | 45.0% | |
| ! | GGTCCCTGCACTTTGTATTT+TGG | - | chr3_2:75042644-75042663 | None:intergenic | 45.0% |
| CGCTATTACATCTCGGGATT+TGG | - | chr3_2:75042997-75043016 | None:intergenic | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_2:75043001-75043020 | Msa0424780:intron | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_2:75043001-75043020 | Msa0424780:intron | 45.0% | |
| CTACGCATCTTCAGTGAAAG+TGG | + | chr3_2:75043632-75043651 | Msa0424780:intron | 45.0% | |
| GCAGATGCTTGATAGGAACT+GGG | + | chr3_2:75043715-75043734 | Msa0424780:intron | 45.0% | |
| CAGATGCTTGATAGGAACTG+GGG | + | chr3_2:75043716-75043735 | Msa0424780:intron | 45.0% | |
| TGCTAGCAACCAAACCTTCT+CGG | + | chr3_2:75043765-75043784 | Msa0424780:CDS | 45.0% | |
| CCTTATTCTCCGAGAAGGTT+TGG | - | chr3_2:75043777-75043796 | None:intergenic | 45.0% | |
| CCAAACCTTCTCGGAGAATA+AGG | + | chr3_2:75043774-75043793 | Msa0424780:CDS | 45.0% | |
| GCATACCTTATTCTCCGAGA+AGG | - | chr3_2:75043782-75043801 | None:intergenic | 45.0% | |
| ! | TAAGGCACCCATTCCTTTGT+GGG | + | chr3_2:75044133-75044152 | Msa0424780:CDS | 45.0% |
| ATCTTGGCCCACAAAGGAAT+GGG | - | chr3_2:75044143-75044162 | None:intergenic | 45.0% | |
| CACTGCAATGCGTATTAGTG+AGG | + | chr3_2:75044209-75044228 | Msa0424780:CDS | 45.0% | |
| GTACATTTATCGTCAGCCTC+AGG | + | chr3_2:75044233-75044252 | Msa0424780:CDS | 45.0% | |
| CAGCCTCAGGTATTCATCTA+AGG | + | chr3_2:75044246-75044265 | Msa0424780:intron | 45.0% | |
| TATGCATAGCGTTCGACTGA+TGG | + | chr3_2:75044425-75044444 | Msa0424780:intron | 45.0% | |
| ATGCATAGCGTTCGACTGAT+GGG | + | chr3_2:75044426-75044445 | Msa0424780:intron | 45.0% | |
| GAATCCTCATCCAAAGCCAA+AGG | + | chr3_2:75044507-75044526 | Msa0424780:CDS | 45.0% | |
| GTCTTGTAGATTGACAGCCA+TGG | - | chr3_2:75044667-75044686 | None:intergenic | 45.0% | |
| !! | TACAATAGGCGCCATTTTCC+TGG | - | chr3_2:75044839-75044858 | None:intergenic | 45.0% |
| CAATGTCAGAGACGAAGGAA+AGG | - | chr3_2:75044967-75044986 | None:intergenic | 45.0% | |
| CTTTCCTTCGTCTCTGACAT+TGG | + | chr3_2:75044965-75044984 | Msa0424780:CDS | 45.0% | |
| GAATCCAATGTCAGAGACGA+AGG | - | chr3_2:75044972-75044991 | None:intergenic | 45.0% | |
| AGCAAGACAATACCTCAGAG+AGG | + | chr3_2:75045098-75045117 | Msa0424780:CDS | 45.0% | |
| AATATCACCCGACGCAAACT+TGG | - | chr3_2:75045233-75045252 | None:intergenic | 45.0% | |
| GTGGAACTTATGTGGACTCA+AGG | + | chr3_2:75045371-75045390 | Msa0424780:CDS | 45.0% | |
| ! | CTGTTCTGGTTAGGAACTGT+AGG | + | chr3_2:75045648-75045667 | Msa0424780:three_prime_UTR | 45.0% |
| ! | AACTGGGCCATACCCGATTT+TGG | + | chr3_2:75039454-75039473 | Msa0424780:CDS | 50.0% |
| TGATTGTCCAGCGAAACGCA+GGG | - | chr3_2:75039540-75039559 | None:intergenic | 50.0% | |
| ATGATTGTCCAGCGAAACGC+AGG | - | chr3_2:75039541-75039560 | None:intergenic | 50.0% | |
| ! | TGCAGGCAAGAGAAAGCACA+AGG | + | chr3_2:75039565-75039584 | Msa0424780:CDS | 50.0% |
| CGTTTCCTCCTCCAAGCAAA+CGG | - | chr3_2:75039669-75039688 | None:intergenic | 50.0% | |
| CGTTTGCTTGGAGGAGGAAA+CGG | + | chr3_2:75039667-75039686 | Msa0424780:CDS | 50.0% | |
| !! | GATCGTGTTAGCATTGGCCT+TGG | + | chr3_2:75039731-75039750 | Msa0424780:CDS | 50.0% |
| !! | TTAGCATTGGCCTTGGTGGA+CGG | + | chr3_2:75039738-75039757 | Msa0424780:CDS | 50.0% |
| GATTTCATACCCGTCCACCA+AGG | - | chr3_2:75039751-75039770 | None:intergenic | 50.0% | |
| ! | TTTGCTATAGGCGGATGAGG+TGG | + | chr3_2:75039838-75039857 | Msa0424780:intron | 50.0% |
| TGAGGTGGTGTTTGAAGGCA+AGG | + | chr3_2:75039853-75039872 | Msa0424780:CDS | 50.0% | |
| ! | TTTTCCTCGACGCTGAGCTT+GGG | - | chr3_2:75040020-75040039 | None:intergenic | 50.0% |
| AGATACATACCCCGTGGACT+AGG | - | chr3_2:75040238-75040257 | None:intergenic | 50.0% | |
| ACACTGAGATACATACCCCG+TGG | - | chr3_2:75040244-75040263 | None:intergenic | 50.0% | |
| TTTAGAGGCCACTCTTGCAC+TGG | + | chr3_2:75040450-75040469 | Msa0424780:CDS | 50.0% | |
| TTCTTCGTCCAGTGCAAGAG+TGG | - | chr3_2:75040461-75040480 | None:intergenic | 50.0% | |
| GTAGGAGAAGACACAACTGG+AGG | + | chr3_2:75040493-75040512 | Msa0424780:CDS | 50.0% | |
| GTCTTGCCCATACAGAGTTG+AGG | + | chr3_2:75040720-75040739 | Msa0424780:CDS | 50.0% | |
| ! | GTGGAGTGTGGATTACCTTG+CGG | + | chr3_2:75040846-75040865 | Msa0424780:intron | 50.0% |
| ! | AGTGTGGATTACCTTGCGGT+TGG | + | chr3_2:75040850-75040869 | Msa0424780:intron | 50.0% |
| CTCTCTCTGCCCAAACCATA+TGG | + | chr3_2:75041169-75041188 | Msa0424780:intron | 50.0% | |
| GTGTTTCCTCATGCATAGCC+TGG | + | chr3_2:75041443-75041462 | Msa0424780:intron | 50.0% | |
| !!! | AAATGCCGCTGACTTTTGCG+AGG | + | chr3_2:75041529-75041548 | Msa0424780:CDS | 50.0% |
| ACCATCCTCGCAAAAGTCAG+CGG | - | chr3_2:75041537-75041556 | None:intergenic | 50.0% | |
| !! | AGAGACAAGAAGGCGTCCTT+GGG | - | chr3_2:75041907-75041926 | None:intergenic | 50.0% |
| !! | TAGAGACAAGAAGGCGTCCT+TGG | - | chr3_2:75041908-75041927 | None:intergenic | 50.0% |
| CAGGAGCTGCACATCTGTTA+GGG | + | chr3_2:75042195-75042214 | Msa0424780:intron | 50.0% | |
| AGAGGCGGTTTAGTGATGAG+AGG | + | chr3_2:75042352-75042371 | Msa0424780:intron | 50.0% | |
| GAGAGGTTACCTAGGTTGTG+GGG | + | chr3_2:75042369-75042388 | Msa0424780:intron | 50.0% | |
| !! | AGCGGTATAGGGGCACTATA+CGG | + | chr3_2:75043013-75043032 | Msa0424780:intron | 50.0% |
| CATATGGAGAGTTTCTGCCG+AGG | - | chr3_2:75043583-75043602 | None:intergenic | 50.0% | |
| CTCGGCAGAAACTCTCCATA+TGG | + | chr3_2:75043581-75043600 | Msa0424780:CDS | 50.0% | |
| CGCAGATGCTTGATAGGAAC+TGG | + | chr3_2:75043714-75043733 | Msa0424780:intron | 50.0% | |
| ! | CTAAGGCACCCATTCCTTTG+TGG | + | chr3_2:75044132-75044151 | Msa0424780:CDS | 50.0% |
| CATCTTGGCCCACAAAGGAA+TGG | - | chr3_2:75044144-75044163 | None:intergenic | 50.0% | |
| CATTCCTTTGTGGGCCAAGA+TGG | + | chr3_2:75044142-75044161 | Msa0424780:CDS | 50.0% | |
| TTCATGTGTCCAGAACTGGC+TGG | + | chr3_2:75044805-75044824 | Msa0424780:intron | 50.0% | |
| TGGAGCTGCTTCCAGGAAAA+TGG | + | chr3_2:75044825-75044844 | Msa0424780:CDS | 50.0% | |
| TGGCGCCTATTGTATTGCAC+TGG | + | chr3_2:75044845-75044864 | Msa0424780:CDS | 50.0% | |
| GGCGCCTATTGTATTGCACT+GGG | + | chr3_2:75044846-75044865 | Msa0424780:CDS | 50.0% | |
| GCCTATTGTATTGCACTGGG+AGG | + | chr3_2:75044849-75044868 | Msa0424780:CDS | 50.0% | |
| GCCTCCCAGTGCAATACAAT+AGG | - | chr3_2:75044853-75044872 | None:intergenic | 50.0% | |
| ! | TATTGCACTGGGAGGCATGT+TGG | + | chr3_2:75044857-75044876 | Msa0424780:CDS | 50.0% |
| ! | ATTGCACTGGGAGGCATGTT+GGG | + | chr3_2:75044858-75044877 | Msa0424780:CDS | 50.0% |
| TCTCCAACTAGTACACGGAC+AGG | - | chr3_2:75044902-75044921 | None:intergenic | 50.0% | |
| GTCAGAGACGAAGGAAAGGT+TGG | - | chr3_2:75044963-75044982 | None:intergenic | 50.0% | |
| ! | CAGTCATGATTGGTCAGGAC+TGG | + | chr3_2:75044993-75045012 | Msa0424780:CDS | 50.0% |
| ! | TGGTAAAAGAGGAAGGGTGC+AGG | + | chr3_2:75045030-75045049 | Msa0424780:CDS | 50.0% |
| AGCTAAAGCCTCCTCATTGC+CGG | - | chr3_2:75045140-75045159 | None:intergenic | 50.0% | |
| TCAAGGTTGCTCGTTCTTCG+AGG | + | chr3_2:75045388-75045407 | Msa0424780:CDS | 50.0% | |
| CAAGGTTGCTCGTTCTTCGA+GGG | + | chr3_2:75045389-75045408 | Msa0424780:CDS | 50.0% | |
| AAGGTTGCTCGTTCTTCGAG+GGG | + | chr3_2:75045390-75045409 | Msa0424780:CDS | 50.0% | |
| CTCGTTCTTCGAGGGGTTAA+TGG | + | chr3_2:75045397-75045416 | Msa0424780:CDS | 50.0% | |
| AACCCGTGGCAAAACGTTCC+CGG | + | chr3_2:75038956-75038975 | Msa0424780:five_prime_UTR | 55.0% | |
| AGTTGCGTGCTACAGAACGC+CGG | - | chr3_2:75038978-75038997 | None:intergenic | 55.0% | |
| GATTGTCCAGCGAAACGCAG+GGG | - | chr3_2:75039539-75039558 | None:intergenic | 55.0% | |
| GACCTCTTCCGTTTGCTTGG+AGG | + | chr3_2:75039658-75039677 | Msa0424780:CDS | 55.0% | |
| CTCCTCCAAGCAAACGGAAG+AGG | - | chr3_2:75039663-75039682 | None:intergenic | 55.0% | |
| CTCTTCCGTTTGCTTGGAGG+AGG | + | chr3_2:75039661-75039680 | Msa0424780:CDS | 55.0% | |
| !! | CGTGTTAGCATTGGCCTTGG+TGG | + | chr3_2:75039734-75039753 | Msa0424780:CDS | 55.0% |
| !! | TAGCATTGGCCTTGGTGGAC+GGG | + | chr3_2:75039739-75039758 | Msa0424780:CDS | 55.0% |
| GCGGATGAGGTGGTGTTTGA+AGG | + | chr3_2:75039848-75039867 | Msa0424780:CDS | 55.0% | |
| ! | GTTTTCCTCGACGCTGAGCT+TGG | - | chr3_2:75040021-75040040 | None:intergenic | 55.0% |
| ATCTCGTTGCCTGCAAGTGG+TGG | + | chr3_2:75040197-75040216 | Msa0424780:CDS | 55.0% | |
| TTGCCTGCAAGTGGTGGTAG+TGG | + | chr3_2:75040203-75040222 | Msa0424780:CDS | 55.0% | |
| GAACCACTACCACCACTTGC+AGG | - | chr3_2:75040209-75040228 | None:intergenic | 55.0% | |
| CTGGAGGTCCCGCAATTTCT+AGG | + | chr3_2:75040509-75040528 | Msa0424780:CDS | 55.0% | |
| GGGCAAGACCATGACTATGC+AGG | - | chr3_2:75040709-75040728 | None:intergenic | 55.0% | |
| TGCCCATACAGAGTTGAGGC+TGG | + | chr3_2:75040724-75040743 | Msa0424780:CDS | 55.0% | |
| GGCTAGGCCTAAGCCCAAAA+AGG | - | chr3_2:75041311-75041330 | None:intergenic | 55.0% | |
| GGTTGACCAGGCTATGCATG+AGG | - | chr3_2:75041452-75041471 | None:intergenic | 55.0% | |
| GTCCTTGGGCACTTCCTTCA+CGG | - | chr3_2:75041893-75041912 | None:intergenic | 55.0% | |
| GCAGGAGCTGCACATCTGTT+AGG | + | chr3_2:75042194-75042213 | Msa0424780:intron | 55.0% | |
| !! | GCGGTATAGGGGCACTATAC+CGG | + | chr3_2:75043014-75043033 | Msa0424780:intron | 55.0% |
| CTTGATAGGAACTGGGGTGC+TGG | + | chr3_2:75043722-75043741 | Msa0424780:CDS | 55.0% | |
| !! | ATAGGAACTGGGGTGCTGGT+TGG | + | chr3_2:75043726-75043745 | Msa0424780:CDS | 55.0% |
| CTAGTACACGGACAGGAGGT+TGG | - | chr3_2:75044895-75044914 | None:intergenic | 55.0% | |
| CCAACTAGTACACGGACAGG+AGG | - | chr3_2:75044899-75044918 | None:intergenic | 55.0% | |
| CCTCCTGTCCGTGTACTAGT+TGG | + | chr3_2:75044896-75044915 | Msa0424780:CDS | 55.0% | |
| !! | GACTGGCCTCATGACAAAGC+TGG | + | chr3_2:75045010-75045029 | Msa0424780:CDS | 55.0% |
| AAGCCTCCTCATTGCCGGAA+GGG | - | chr3_2:75045135-75045154 | None:intergenic | 55.0% | |
| AAAGCCTCCTCATTGCCGGA+AGG | - | chr3_2:75045136-75045155 | None:intergenic | 55.0% | |
| TTGGCTGCAGGGAGACTTGA+TGG | - | chr3_2:75045214-75045233 | None:intergenic | 55.0% | |
| TAGGGAGGCAGACGTTGACG+CGG | + | chr3_2:75038929-75038948 | Msa0424780:five_prime_UTR | 60.0% | |
| ! | ACGCCGGGAACGTTTTGCCA+CGG | - | chr3_2:75038962-75038981 | None:intergenic | 60.0% |
| GTTGCGTGCTACAGAACGCC+GGG | - | chr3_2:75038977-75038996 | None:intergenic | 60.0% | |
| TCCAGCGAAACGCAGGGGAA+CGG | - | chr3_2:75039534-75039553 | None:intergenic | 60.0% | |
| AGTTCCCAAGCTCAGCGTCG+AGG | + | chr3_2:75040013-75040032 | Msa0424780:CDS | 60.0% | |
| ! | TCTGGGATCAGCCAACCGCA+AGG | - | chr3_2:75040864-75040883 | None:intergenic | 60.0% |
| ! | CGGTTGGCTGATCCCAGAGA+AGG | + | chr3_2:75040866-75040885 | Msa0424780:intron | 60.0% |
| !!! | GCCGCTGACTTTTGCGAGGA+TGG | + | chr3_2:75041533-75041552 | Msa0424780:CDS | 60.0% |
| !! | GACCGTGAAGGAAGTGCCCA+AGG | + | chr3_2:75041888-75041907 | Msa0424780:intron | 60.0% |
| CTCGCCATCTTGGCCCACAA+AGG | - | chr3_2:75044149-75044168 | None:intergenic | 60.0% | |
| GACGGGACTACTCGCCATCT+TGG | - | chr3_2:75044159-75044178 | None:intergenic | 60.0% | |
| ATGGCGAGTAGTCCCGTCGA+TGG | + | chr3_2:75044161-75044180 | Msa0424780:CDS | 60.0% | |
| GAAGCAGCTCCAGCCAGTTC+TGG | - | chr3_2:75044817-75044836 | None:intergenic | 60.0% | |
| AACTGGCTGGAGCTGCTTCC+AGG | + | chr3_2:75044818-75044837 | Msa0424780:CDS | 60.0% | |
| ACGGACAGGAGGTTGGCGAA+GGG | - | chr3_2:75044888-75044907 | None:intergenic | 60.0% | |
| GCGGAATGAGAGCCTCTCTG+AGG | - | chr3_2:75045113-75045132 | None:intergenic | 60.0% | |
| AGGCTCTCATTCCGCCCTTC+CGG | + | chr3_2:75045118-75045137 | Msa0424780:CDS | 60.0% | |
| ATTCCGCCCTTCCGGCAATG+AGG | + | chr3_2:75045126-75045145 | Msa0424780:CDS | 60.0% | |
| CCGACGCAAACTTGGCTGCA+GGG | - | chr3_2:75045225-75045244 | None:intergenic | 60.0% | |
| CCCTGCAGCCAAGTTTGCGT+CGG | + | chr3_2:75045222-75045241 | Msa0424780:CDS | 60.0% | |
| CCTGCAGCCAAGTTTGCGTC+GGG | + | chr3_2:75045223-75045242 | Msa0424780:CDS | 60.0% | |
| GTTGACGCGGTGGAAACCCG+TGG | + | chr3_2:75038942-75038961 | Msa0424780:five_prime_UTR | 65.0% | |
| ! | CGCCGGGAACGTTTTGCCAC+GGG | - | chr3_2:75038961-75038980 | None:intergenic | 65.0% |
| CCAGCGAAACGCAGGGGAAC+GGG | - | chr3_2:75039533-75039552 | None:intergenic | 65.0% | |
| CACGGACAGGAGGTTGGCGA+AGG | - | chr3_2:75044889-75044908 | None:intergenic | 65.0% | |
| CCTCCTCATTGCCGGAAGGG+CGG | - | chr3_2:75045132-75045151 | None:intergenic | 65.0% | |
| CCCGACGCAAACTTGGCTGC+AGG | - | chr3_2:75045226-75045245 | None:intergenic | 65.0% | |
| GGAGGCAGACGTTGACGCGG+TGG | + | chr3_2:75038932-75038951 | Msa0424780:five_prime_UTR | 70.0% | |
| CCCGTTCCCCTGCGTTTCGC+TGG | + | chr3_2:75039530-75039549 | Msa0424780:CDS | 70.0% | |
| CCGCCCTTCCGGCAATGAGG+AGG | + | chr3_2:75045129-75045148 | Msa0424780:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 75038893 | 75045753 | 75038893 | ID=Msa0424780;Name=Msa0424780 |
| chr3_2 | mRNA | 75038893 | 75045753 | 75038893 | ID=Msa0424780-mRNA-1;Parent=Msa0424780;Name=Msa0424780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=205|1|1|1|0.92|0.85|14|282|677 |
| chr3_2 | exon | 75038893 | 75039087 | 75038893 | ID=Msa0424780-mRNA-1:exon:19075;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75039430 | 75039760 | 75039430 | ID=Msa0424780-mRNA-1:exon:19076;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75039848 | 75039891 | 75039848 | ID=Msa0424780-mRNA-1:exon:19077;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75039973 | 75040051 | 75039973 | ID=Msa0424780-mRNA-1:exon:19078;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75040131 | 75040247 | 75040131 | ID=Msa0424780-mRNA-1:exon:19079;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75040394 | 75040576 | 75040394 | ID=Msa0424780-mRNA-1:exon:19080;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75040698 | 75040784 | 75040698 | ID=Msa0424780-mRNA-1:exon:19081;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75041515 | 75041618 | 75041515 | ID=Msa0424780-mRNA-1:exon:19082;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75041698 | 75041785 | 75041698 | ID=Msa0424780-mRNA-1:exon:19083;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75043539 | 75043619 | 75043539 | ID=Msa0424780-mRNA-1:exon:19084;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75043719 | 75043795 | 75043719 | ID=Msa0424780-mRNA-1:exon:19085;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75044119 | 75044254 | 75044119 | ID=Msa0424780-mRNA-1:exon:19086;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75044466 | 75044528 | 75044466 | ID=Msa0424780-mRNA-1:exon:19087;Parent=Msa0424780-mRNA-1 |
| chr3_2 | exon | 75044818 | 75045753 | 75044818 | ID=Msa0424780-mRNA-1:exon:19088;Parent=Msa0424780-mRNA-1 |
| chr3_2 | five_prime_UTR | 75038893 | 75039087 | 75038893 | ID=Msa0424780-mRNA-1:five_prime_utr;Parent=Msa0424780-mRNA-1 |
| chr3_2 | five_prime_UTR | 75039430 | 75039439 | 75039430 | ID=Msa0424780-mRNA-1:five_prime_utr;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75039440 | 75039760 | 75039440 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75039848 | 75039891 | 75039848 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75039973 | 75040051 | 75039973 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75040131 | 75040247 | 75040131 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75040394 | 75040576 | 75040394 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75040698 | 75040784 | 75040698 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75041515 | 75041618 | 75041515 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75041698 | 75041785 | 75041698 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75043539 | 75043619 | 75043539 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75043719 | 75043795 | 75043719 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75044119 | 75044254 | 75044119 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75044466 | 75044528 | 75044466 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | CDS | 75044818 | 75045471 | 75044818 | ID=Msa0424780-mRNA-1:cds;Parent=Msa0424780-mRNA-1 |
| chr3_2 | three_prime_UTR | 75045472 | 75045753 | 75045472 | ID=Msa0424780-mRNA-1:three_prime_utr;Parent=Msa0424780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
