Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450490 | XP_024633885.1 | 89.922 | 516 | 26 | 2 | 1 | 499 | 1 | 507 | 0.0 | 918 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450490 | I3SGI5 | 89.535 | 516 | 28 | 2 | 1 | 499 | 1 | 507 | 0.0 | 913 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0450490 | 0.830923 | 2.234275e-55 | -8.615850e-47 |
| Msa0015300 | Msa0450490 | 0.815637 | 8.347103e-52 | -8.615850e-47 |
| Msa0057140 | Msa0450490 | 0.813987 | 1.937451e-51 | -8.615850e-47 |
| Msa0064350 | Msa0450490 | 0.813706 | 2.234893e-51 | -8.615850e-47 |
| Msa0084780 | Msa0450490 | 0.814012 | 1.913665e-51 | -8.615850e-47 |
| Msa0191050 | Msa0450490 | 0.842795 | 2.079002e-58 | -8.615850e-47 |
| Msa0194480 | Msa0450490 | 0.800670 | 1.292644e-48 | -8.615850e-47 |
| Msa0233350 | Msa0450490 | 0.842215 | 2.962938e-58 | -8.615850e-47 |
| Msa0450490 | Msa0477080 | 0.817849 | 2.663320e-52 | -8.615850e-47 |
| Msa0450490 | Msa0555200 | 0.816902 | 4.353003e-52 | -8.615850e-47 |
| Msa0450490 | Msa0690160 | 0.811584 | 6.506989e-51 | -8.615850e-47 |
| Msa0450490 | Msa0750430 | 0.806687 | 7.289267e-50 | -8.615850e-47 |
| Msa0450490 | Msa1089840 | 0.818067 | 2.378686e-52 | -8.615850e-47 |
| Msa0450490 | Msa1171870 | 0.806275 | 8.902047e-50 | -8.615850e-47 |
| Msa0450490 | Msa1269300 | 0.816492 | 5.378970e-52 | -8.615850e-47 |
| Msa0450490 | Msa1304820 | 0.844700 | 6.427740e-59 | -8.615850e-47 |
| Msa0450490 | Msa1306430 | 0.812548 | 4.011294e-51 | -8.615850e-47 |
| Msa0450490 | Msa1358610 | -0.812999 | 3.195094e-51 | -8.615850e-47 |
| Msa0450490 | Msa1404010 | 0.807100 | 5.962113e-50 | -8.615850e-47 |
| Msa0450490 | Msa1437260 | 0.944449 | 1.909352e-103 | -8.615850e-47 |
| Msa0450490 | Msa1440000 | 0.814103 | 1.826652e-51 | -8.615850e-47 |
| Msa0450490 | Msa1461280 | 0.826622 | 2.452208e-54 | -8.615850e-47 |
| Msa0267970 | Msa0450490 | 0.808931 | 2.430552e-50 | -8.615850e-47 |
| Msa0314720 | Msa0450490 | 0.809102 | 2.233055e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450490 | MtrunA17_Chr3g0117161 | 92.462 | 398 | 21 | 1 | 102 | 499 | 1 | 389 | 0.0 | 728 |
| Msa0450490 | MtrunA17_Chr3g0117151 | 81.034 | 116 | 5 | 1 | 1 | 99 | 1 | 116 | 1.59e-58 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450490 | AT4G34140.3 | 38.462 | 572 | 228 | 15 | 2 | 499 | 5 | 526 | 1.18e-98 | 307 |
| Msa0450490 | AT4G34140.1 | 38.569 | 573 | 227 | 15 | 2 | 499 | 5 | 527 | 2.69e-98 | 306 |
| Msa0450490 | AT4G34140.2 | 38.394 | 573 | 228 | 15 | 2 | 499 | 5 | 527 | 9.83e-98 | 305 |
| Msa0450490 | AT4G34140.5 | 43.869 | 367 | 129 | 9 | 195 | 499 | 9 | 360 | 2.23e-81 | 257 |
| Msa0450490 | AT4G34140.4 | 43.869 | 367 | 129 | 9 | 195 | 499 | 36 | 387 | 1.44e-80 | 256 |
| Msa0450490 | AT4G34140.9 | 43.750 | 368 | 127 | 9 | 195 | 499 | 36 | 386 | 4.62e-80 | 255 |
| Msa0450490 | AT4G34140.8 | 43.478 | 368 | 130 | 9 | 195 | 499 | 9 | 361 | 1.33e-79 | 253 |
| Msa0450490 | AT4G34140.7 | 43.478 | 368 | 130 | 9 | 195 | 499 | 36 | 388 | 8.68e-79 | 251 |
| Msa0450490 | AT4G34140.6 | 43.976 | 332 | 118 | 7 | 227 | 499 | 25 | 347 | 8.22e-74 | 237 |
| Msa0450490 | AT4G34140.10 | 40.678 | 354 | 154 | 7 | 12 | 349 | 14 | 327 | 4.71e-69 | 228 |
Find 152 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTTGTTGAGTTCTTTC+AGG | 0.164384 | 3_3:+35914293 | None:intergenic |
| AACTGGATTACCGTGTATTT+AGG | 0.190469 | 3_3:+35910715 | None:intergenic |
| CATGCCTTCTAGAAGATTTC+TGG | 0.200653 | 3_3:+35912002 | None:intergenic |
| CTACAAAATCTCTTAAACTA+TGG | 0.262255 | 3_3:-35915306 | Msa0450490:exon |
| GCCTCTTCTGTAGCTTCTTC+TGG | 0.265752 | 3_3:+35912057 | None:intergenic |
| CTTATTGATCTATACTTATC+TGG | 0.274374 | 3_3:-35913851 | Msa0450490:CDS |
| GGTGGCTTTGGTGTTGGTCC+AGG | 0.281454 | 3_3:-35912132 | Msa0450490:CDS |
| ATAACGATTCTACCTTTGTT+TGG | 0.286937 | 3_3:-35915259 | Msa0450490:CDS |
| TTCTGTTCCCGCCCTTGTGC+AGG | 0.315698 | 3_3:-35911028 | Msa0450490:CDS |
| ATGTTTCCAACTGGCTGAAT+AGG | 0.318885 | 3_3:+35910967 | None:intergenic |
| ACTGGATTACCGTGTATTTA+GGG | 0.319680 | 3_3:+35910716 | None:intergenic |
| ATCGCATTTGATTGTGCTAT+TGG | 0.331143 | 3_3:-35910690 | Msa0450490:three_prime_UTR |
| AGTGGAAATACCTTCATCTA+TGG | 0.335384 | 3_3:+35913480 | None:intergenic |
| ACAATCAAATGCGATTTAAC+TGG | 0.343342 | 3_3:+35910698 | None:intergenic |
| TAACGATTCTACCTTTGTTT+GGG | 0.351558 | 3_3:-35915258 | Msa0450490:CDS |
| AACATTGGCAGTGCAGGCTT+GGG | 0.359973 | 3_3:-35910949 | Msa0450490:CDS |
| TTGATTGTGCTATTGGTGTT+CGG | 0.363400 | 3_3:-35910683 | Msa0450490:three_prime_UTR |
| ACAGGCCCAGCAGATGAAAA+TGG | 0.380870 | 3_3:-35913622 | Msa0450490:CDS |
| TGATTGTGCTATTGGTGTTC+GGG | 0.383279 | 3_3:-35910682 | Msa0450490:three_prime_UTR |
| CTATAGTACCAGCCAGCATT+AGG | 0.390043 | 3_3:+35914965 | None:intergenic |
| TTTCCGAAATTTGAGGTTCT+GGG | 0.393041 | 3_3:+35915282 | None:intergenic |
| CAGTTGTGGACTTGTGGGAC+TGG | 0.396053 | 3_3:-35913044 | Msa0450490:CDS |
| GAGGCGTTAAAGATGTCATT+TGG | 0.400128 | 3_3:-35912039 | Msa0450490:CDS |
| TTGTTGAGTTCTTTCAGGTT+TGG | 0.403639 | 3_3:+35914298 | None:intergenic |
| AAACATTGGCAGTGCAGGCT+TGG | 0.407324 | 3_3:-35910950 | Msa0450490:CDS |
| GGACCCAGAACCTCAAATTT+CGG | 0.413387 | 3_3:-35915285 | Msa0450490:CDS |
| CTGCCGATCCAACAAAAGAT+TGG | 0.415464 | 3_3:-35912493 | Msa0450490:CDS |
| GGCAAGGTTGGTTGGAAGAC+TGG | 0.422436 | 3_3:-35912980 | Msa0450490:CDS |
| GTTTCCAGTTGTGGACTTGT+GGG | 0.427219 | 3_3:-35913049 | Msa0450490:CDS |
| AGCTTACAGAAATACTGAAA+TGG | 0.427789 | 3_3:-35913659 | Msa0450490:CDS |
| CAGTCCCACAAGTCCACAAC+TGG | 0.428086 | 3_3:+35913045 | None:intergenic |
| CCCGCCCTTGTGCAGGGAGA+AGG | 0.431469 | 3_3:-35911021 | Msa0450490:CDS |
| AGAATCTTGCATGGTGGCTT+TGG | 0.433461 | 3_3:-35912144 | Msa0450490:CDS |
| AAAAGATAGGGTGGCAAGGT+TGG | 0.437322 | 3_3:-35912992 | Msa0450490:CDS |
| TGCCGATCCAACAAAAGATT+GGG | 0.443261 | 3_3:-35912492 | Msa0450490:CDS |
| TACCATTCCGACGGCGGTGG+AGG | 0.443987 | 3_3:+35913963 | None:intergenic |
| GCTTCTTCTGGACAAGCATC+AGG | 0.444285 | 3_3:+35912069 | None:intergenic |
| AGTTTCCAGTTGTGGACTTG+TGG | 0.448878 | 3_3:-35913050 | Msa0450490:CDS |
| GTTGGAAACATTGGCAGTGC+AGG | 0.451094 | 3_3:-35910955 | Msa0450490:CDS |
| CTTACCATCCCCTGCTTCCT+CGG | 0.451447 | 3_3:+35914193 | None:intergenic |
| GCTTACAGAAATACTGAAAT+GGG | 0.451792 | 3_3:-35913658 | Msa0450490:CDS |
| GAGGATTGTTCTTCCTTCCT+CGG | 0.454567 | 3_3:-35914254 | Msa0450490:CDS |
| TATGCCAGAAATCTTCTAGA+AGG | 0.454930 | 3_3:-35912006 | Msa0450490:CDS |
| CATTGAATCAAGGAAAGATC+TGG | 0.457483 | 3_3:-35913079 | Msa0450490:CDS |
| GGACTTGTGGGACTGGGAAA+TGG | 0.461025 | 3_3:-35913037 | Msa0450490:CDS |
| AATCTGGTACGCGTCAAAAC+AGG | 0.461723 | 3_3:-35912874 | Msa0450490:intron |
| TTGAGATGTACTTCGCAGAT+AGG | 0.463041 | 3_3:+35912895 | None:intergenic |
| GCACTGCCAATGTTTCCAAC+TGG | 0.470042 | 3_3:+35910958 | None:intergenic |
| TTGCATGGTGGCTTTGGTGT+TGG | 0.471657 | 3_3:-35912138 | Msa0450490:CDS |
| CGGTCAAGGTTCCTATCTGT+TGG | 0.472224 | 3_3:+35914213 | None:intergenic |
| GTGGCTTTGGTGTTGGTCCA+GGG | 0.472256 | 3_3:-35912131 | Msa0450490:CDS |
| TTCAATTTCGTTTCCGAGGA+AGG | 0.473128 | 3_3:+35914241 | None:intergenic |
| GATAGGGTGGCAAGGTTGGT+TGG | 0.473323 | 3_3:-35912988 | Msa0450490:CDS |
| ATCTTCTAGAAGGCATGGGC+TGG | 0.474580 | 3_3:-35911996 | Msa0450490:CDS |
| CGCAACTTTACTTTCACGCC+AGG | 0.476804 | 3_3:-35915226 | Msa0450490:intron |
| GGAACCTTGACCGAGGAAGC+AGG | 0.477060 | 3_3:-35914203 | Msa0450490:CDS |
| ATTGAAACTAACCAACAGAT+AGG | 0.478031 | 3_3:-35914224 | Msa0450490:CDS |
| ACGCAAGTGGCTGGTGCGTA+GGG | 0.481820 | 3_3:+35910786 | None:intergenic |
| TCCACAAGTTGGACTGTTCG+TGG | 0.482684 | 3_3:+35913989 | None:intergenic |
| GGTCCAGGGCAGAAGAATCT+TGG | 0.483376 | 3_3:-35912117 | Msa0450490:CDS |
| CAAGTCCTTCTCCCTGCACA+AGG | 0.485026 | 3_3:+35911016 | None:intergenic |
| CCTTCTCCCTGCACAAGGGC+GGG | 0.486959 | 3_3:+35911021 | None:intergenic |
| CTTGTGCAGGGAGAAGGACT+TGG | 0.487602 | 3_3:-35911015 | Msa0450490:CDS |
| CTGCGAAGTACATCTCAATC+TGG | 0.490416 | 3_3:-35912890 | Msa0450490:CDS |
| ACACCAAGATTCTTCTGCCC+TGG | 0.490581 | 3_3:+35912114 | None:intergenic |
| GATGTTCTGATATGTTGTTT+CGG | 0.493749 | 3_3:-35915370 | Msa0450490:five_prime_UTR |
| TTGGCAGTGCAGGCTTGGGG+TGG | 0.496258 | 3_3:-35910945 | Msa0450490:CDS |
| CAGTTCAACAAAAGGCTTGG+TGG | 0.498063 | 3_3:-35910992 | Msa0450490:CDS |
| AAACACATGCTACATTGGTC+TGG | 0.500130 | 3_3:+35910862 | None:intergenic |
| GGACTTGGCAGTTCAACAAA+AGG | 0.504360 | 3_3:-35911000 | Msa0450490:CDS |
| AGTTGTGGACTTGTGGGACT+GGG | 0.509025 | 3_3:-35913043 | Msa0450490:CDS |
| AAGTCAGCTTTCTGTATCCA+AGG | 0.510213 | 3_3:-35912357 | Msa0450490:intron |
| CAGCCACTTGCGTTAGATCT+CGG | 0.510703 | 3_3:-35910776 | Msa0450490:three_prime_UTR |
| TTTGTAATAAACACCATCAC+TGG | 0.513294 | 3_3:+35914940 | None:intergenic |
| ATCCCCTGCTTCCTCGGTCA+AGG | 0.516110 | 3_3:+35914199 | None:intergenic |
| ACCCTCCACCGCCGTCGGAA+TGG | 0.516570 | 3_3:-35913965 | Msa0450490:intron |
| ATCATGATCCTAATGCTGGC+TGG | 0.520822 | 3_3:-35914973 | Msa0450490:CDS |
| TTATATCCATCGGTTTCCAC+GGG | 0.522689 | 3_3:+35913785 | None:intergenic |
| GTTATATCCATCGGTTTCCA+CGG | 0.523283 | 3_3:+35913784 | None:intergenic |
| TCTGTTCCCGCCCTTGTGCA+GGG | 0.524418 | 3_3:-35911027 | Msa0450490:CDS |
| AACTTCTCATTAGAAGCTGA+TGG | 0.525343 | 3_3:-35913764 | Msa0450490:intron |
| CAGAAATCTTCTAGAAGGCA+TGG | 0.525345 | 3_3:-35912001 | Msa0450490:CDS |
| TGGCAGTTCAACAAAAGGCT+TGG | 0.525531 | 3_3:-35910995 | Msa0450490:CDS |
| GGATACCATTCCGACGGCGG+TGG | 0.526658 | 3_3:+35913960 | None:intergenic |
| GGAATTTCAGTTGAAGTGGA+AGG | 0.529631 | 3_3:+35912407 | None:intergenic |
| GTGGAACCTATTCAGCCAGT+TGG | 0.535283 | 3_3:-35910973 | Msa0450490:CDS |
| ATGGGAGGTGACTGGACCAC+AGG | 0.535287 | 3_3:-35913640 | Msa0450490:CDS |
| AACGCAAGTGGCTGGTGCGT+AGG | 0.535703 | 3_3:+35910785 | None:intergenic |
| TACATTGGTCTGGTGGTTGA+AGG | 0.536103 | 3_3:+35910872 | None:intergenic |
| TCCTTCTCCCTGCACAAGGG+CGG | 0.537892 | 3_3:+35911020 | None:intergenic |
| ATGGTCAAGTCATTGAATCA+AGG | 0.539010 | 3_3:-35913089 | Msa0450490:CDS |
| TAATGAGAAGTTATATCCAT+CGG | 0.540938 | 3_3:+35913775 | None:intergenic |
| GAAGCCACATATCTCGCACT+TGG | 0.541343 | 3_3:+35912533 | None:intergenic |
| GATGAAAATCACTTAGCTGA+TGG | 0.548544 | 3_3:-35913508 | Msa0450490:CDS |
| CGAGATCTAACGCAAGTGGC+TGG | 0.549793 | 3_3:+35910777 | None:intergenic |
| ATTCAGCCAGTTGGAAACAT+TGG | 0.550272 | 3_3:-35910964 | Msa0450490:CDS |
| TCTAGAAGGCATGGGCTGGA+AGG | 0.551981 | 3_3:-35911992 | Msa0450490:CDS |
| ATACTGAAATGGGAGGTGAC+TGG | 0.558400 | 3_3:-35913648 | Msa0450490:CDS |
| TTTCAACAGAGGAGATAGAT+GGG | 0.558751 | 3_3:+35912935 | None:intergenic |
| ACCATTCCGACGGCGGTGGA+GGG | 0.559175 | 3_3:+35913964 | None:intergenic |
| AGATTTCTGGCATAACTACC+TGG | 0.559707 | 3_3:+35912015 | None:intergenic |
| TTGGATACAGAAAGCTGACT+TGG | 0.564129 | 3_3:+35912359 | None:intergenic |
| GAACCTTGACCGAGGAAGCA+GGG | 0.564978 | 3_3:-35914202 | Msa0450490:CDS |
| AAACCCAAGTGCGAGATATG+TGG | 0.566437 | 3_3:-35912537 | Msa0450490:CDS |
| GATGGAAGTTCCATAGATGA+AGG | 0.567701 | 3_3:-35913490 | Msa0450490:intron |
| GGTGGCCTCGTCGATGAACA+AGG | 0.574701 | 3_3:-35910927 | Msa0450490:exon |
| GGTGGAGGGTTTCCACAAGT+TGG | 0.574803 | 3_3:+35913978 | None:intergenic |
| TCCACGAACAGTCCAACTTG+TGG | 0.576946 | 3_3:-35913990 | Msa0450490:CDS |
| GTGGGTAAATCTTTCGCTGT+AGG | 0.578293 | 3_3:+35912386 | None:intergenic |
| TGGAAACCCTCCACCGCCGT+CGG | 0.581504 | 3_3:-35913970 | Msa0450490:CDS |
| GATGCTTATCAAGTAGAAGA+AGG | 0.583550 | 3_3:-35913553 | Msa0450490:CDS |
| TCCAGAAGAAGCTACAGAAG+AGG | 0.585922 | 3_3:-35912058 | Msa0450490:CDS |
| ACATTGGCAGTGCAGGCTTG+GGG | 0.591205 | 3_3:-35910948 | Msa0450490:CDS |
| TGTAGGAATTTCAGTTGAAG+TGG | 0.593062 | 3_3:+35912403 | None:intergenic |
| AGAAATCTTCTAGAAGGCAT+GGG | 0.593920 | 3_3:-35912000 | Msa0450490:CDS |
| CTGGATTACCGTGTATTTAG+GGG | 0.594159 | 3_3:+35910717 | None:intergenic |
| AGAAGGCATGGGCTGGAAGG+AGG | 0.595542 | 3_3:-35911989 | Msa0450490:intron |
| AAGCCACATATCTCGCACTT+GGG | 0.596356 | 3_3:+35912534 | None:intergenic |
| TAGTTTCAATTTCGTTTCCG+AGG | 0.598650 | 3_3:+35914237 | None:intergenic |
| ATGGAAAAGATAGGGTGGCA+AGG | 0.600283 | 3_3:-35912996 | Msa0450490:CDS |
| ACAGACCCCGTGGAAACCGA+TGG | 0.614452 | 3_3:-35913791 | Msa0450490:CDS |
| AACCTTGACCGAGGAAGCAG+GGG | 0.617715 | 3_3:-35914201 | Msa0450490:CDS |
| CCACCGAGATCTAACGCAAG+TGG | 0.618868 | 3_3:+35910773 | None:intergenic |
| TTAAAGATGTCATTTGGACC+AGG | 0.619131 | 3_3:-35912033 | Msa0450490:CDS |
| TGTGATGTACAACAATACAT+AGG | 0.619990 | 3_3:+35910742 | None:intergenic |
| GGGCAGAAGAATCTTGGTGT+CGG | 0.634541 | 3_3:-35912111 | Msa0450490:CDS |
| GAAAGCTGACTTGGCAACGT+GGG | 0.634656 | 3_3:+35912368 | None:intergenic |
| TTGACCGAGGAAGCAGGGGA+TGG | 0.636386 | 3_3:-35914197 | Msa0450490:intron |
| ATCAAGTAGAAGAAGGTGAG+TGG | 0.644722 | 3_3:-35913546 | Msa0450490:CDS |
| AAGTCCTTCTCCCTGCACAA+GGG | 0.644870 | 3_3:+35911017 | None:intergenic |
| AATACAAGACATTAACAATG+AGG | 0.647640 | 3_3:-35914276 | Msa0450490:CDS |
| AAAAGATGGAAAAGATAGGG+TGG | 0.647950 | 3_3:-35913001 | Msa0450490:CDS |
| GCTGAAAGAAGAATCTTGCA+TGG | 0.649213 | 3_3:-35912153 | Msa0450490:CDS |
| TGGTACTATAGCACCAGTGA+TGG | 0.651452 | 3_3:-35914953 | Msa0450490:CDS |
| TGTGAGTGTTGCAAATTCAA+AGG | 0.656462 | 3_3:+35910811 | None:intergenic |
| ATCACACTCCCCTAAATACA+CGG | 0.657282 | 3_3:-35910725 | Msa0450490:three_prime_UTR |
| TTTATATTAGATGATAACTG+AGG | 0.658562 | 3_3:+35912464 | None:intergenic |
| ACAAGACATTAACAATGAGG+AGG | 0.664360 | 3_3:-35914273 | Msa0450490:CDS |
| TGAGTGGATTCCAGATCCAG+AGG | 0.665421 | 3_3:-35913530 | Msa0450490:CDS |
| CACATGCTACATTGGTCTGG+TGG | 0.668772 | 3_3:+35910865 | None:intergenic |
| GTCAGCCTTGTTCATCGACG+AGG | 0.669777 | 3_3:+35910922 | None:intergenic |
| TACAGAAATACTGAAATGGG+AGG | 0.669814 | 3_3:-35913655 | Msa0450490:CDS |
| GAAGGAGGATACCATTCCGA+CGG | 0.673337 | 3_3:+35913954 | None:intergenic |
| GGAGGATACCATTCCGACGG+CGG | 0.673907 | 3_3:+35913957 | None:intergenic |
| AGAAAGCTGACTTGGCAACG+TGG | 0.688129 | 3_3:+35912367 | None:intergenic |
| ATGTCAATATAGAGATCGCG+CGG | 0.698371 | 3_3:-35912175 | Msa0450490:CDS |
| GAAAGAAGAATCTTGCATGG+TGG | 0.712797 | 3_3:-35912150 | Msa0450490:CDS |
| TGGTCAAACAATCTGCAAAG+CGG | 0.722667 | 3_3:-35912960 | Msa0450490:CDS |
| TATATCCATCGGTTTCCACG+GGG | 0.724216 | 3_3:+35913786 | None:intergenic |
| CCACTTGCGTTAGATCTCGG+TGG | 0.727619 | 3_3:-35910773 | Msa0450490:three_prime_UTR |
| ACAGATAGGAACCTTGACCG+AGG | 0.745062 | 3_3:-35914210 | Msa0450490:CDS |
| TGATACAGTGACAGACCCCG+TGG | 0.770896 | 3_3:-35913801 | Msa0450490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTATTTTTTTTTAA+TGG | - | chr3_3:35914977-35914996 | Msa0450490:CDS | 0.0% |
| !! | ATAAAAAATCAAATTATACA+TGG | + | chr3_3:35913275-35913294 | None:intergenic | 10.0% |
| !! | AATTCAAAATTAAAATTCTT+AGG | - | chr3_3:35914123-35914142 | Msa0450490:intron | 10.0% |
| !! | ATATAATCATCAATAGAAAA+AGG | + | chr3_3:35912124-35912143 | None:intergenic | 15.0% |
| !!! | TAAATTTCATTTTAGAATCA+TGG | - | chr3_3:35913325-35913344 | Msa0450490:intron | 15.0% |
| !! | GTATAGTTCATATAAATATA+GGG | + | chr3_3:35914304-35914323 | None:intergenic | 15.0% |
| !!! | AAATTTCTACATTTTCTATT+TGG | + | chr3_3:35914561-35914580 | None:intergenic | 15.0% |
| !! | AAATAGAAAATGTAGAAATT+TGG | - | chr3_3:35914560-35914579 | Msa0450490:intron | 15.0% |
| !!! | TTTTTTATAATGACAAACTT+TGG | - | chr3_3:35914859-35914878 | Msa0450490:intron | 15.0% |
| !!! | TATAAGTTGAAAACAACATA+TGG | + | chr3_3:35911284-35911303 | None:intergenic | 20.0% |
| !! | ATTAAATTGCTTATCCAAAA+AGG | - | chr3_3:35911378-35911397 | Msa0450490:intron | 20.0% |
| !! | TTAAATTGCTTATCCAAAAA+GGG | - | chr3_3:35911379-35911398 | Msa0450490:intron | 20.0% |
| !!! | TATTATTCATAAGCTTGTTA+AGG | + | chr3_3:35911528-35911547 | None:intergenic | 20.0% |
| !!! | CAAAAATAGTATTTTCAAGT+TGG | - | chr3_3:35911656-35911675 | Msa0450490:intron | 20.0% |
| !!! | TAGGAGTATTCAATAAAATA+CGG | + | chr3_3:35911904-35911923 | None:intergenic | 20.0% |
| !!! | TGCACATCATAATAATTTTT+TGG | + | chr3_3:35912685-35912704 | None:intergenic | 20.0% |
| !! | ATCAAACATATGAACAAAAT+AGG | + | chr3_3:35912884-35912903 | None:intergenic | 20.0% |
| !! | GAAATTTACGTATAATAACA+AGG | + | chr3_3:35913313-35913332 | None:intergenic | 20.0% |
| !! | AAGTTACAATTTATAAGCAA+TGG | - | chr3_3:35913350-35913369 | Msa0450490:intron | 20.0% |
| !! | AGTTACAATTTATAAGCAAT+GGG | - | chr3_3:35913351-35913370 | Msa0450490:intron | 20.0% |
| !! | TTTCAAAATAAAGCTGTATT+GGG | - | chr3_3:35913395-35913414 | Msa0450490:intron | 20.0% |
| !! | TTTATATTAGATGATAACTG+AGG | + | chr3_3:35913582-35913601 | None:intergenic | 20.0% |
| !!! | CAATGGTATAGTTTTTAAAT+AGG | + | chr3_3:35914172-35914191 | None:intergenic | 20.0% |
| !! | TCTGTTATATATAAGCTAAT+TGG | + | chr3_3:35914201-35914220 | None:intergenic | 20.0% |
| !! | TGTGATAATATTAAAAGATC+TGG | - | chr3_3:35914254-35914273 | Msa0450490:CDS | 20.0% |
| !! | GGTATAGTTCATATAAATAT+AGG | + | chr3_3:35914305-35914324 | None:intergenic | 20.0% |
| !! | CATTATTGTATTATTGTACA+TGG | + | chr3_3:35914503-35914522 | None:intergenic | 20.0% |
| !! | ATAAAAGTTTATAAAAGAGG+AGG | + | chr3_3:35914630-35914649 | None:intergenic | 20.0% |
| !! | TCGATAAAAGTTTATAAAAG+AGG | + | chr3_3:35914633-35914652 | None:intergenic | 20.0% |
| !!! | AAATTCACATTGTTTTATGT+TGG | + | chr3_3:35914842-35914861 | None:intergenic | 20.0% |
| !!! | GCAAAATTCACAATTTTTAT+CGG | - | chr3_3:35914938-35914957 | Msa0450490:intron | 20.0% |
| !!! | CATGTGTTTTTATTATGATT+AGG | - | chr3_3:35915195-35915214 | Msa0450490:intron | 20.0% |
| !! | CATAGTTTAAGAGATTTTGT+AGG | + | chr3_3:35910739-35910758 | None:intergenic | 25.0% |
| ! | CTACAAAATCTCTTAAACTA+TGG | - | chr3_3:35910737-35910756 | Msa0450490:three_prime_UTR | 25.0% |
| ! | TGGTGTTTATTACAAATTTG+AGG | - | chr3_3:35911110-35911129 | Msa0450490:intron | 25.0% |
| ! | GTTTATTACAAATTTGAGGA+TGG | - | chr3_3:35911114-35911133 | Msa0450490:intron | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+AGG | - | chr3_3:35911591-35911610 | Msa0450490:intron | 25.0% |
| ! | TAAGAGATGTAAATGACTTA+GGG | + | chr3_3:35911617-35911636 | None:intergenic | 25.0% |
| ! | ATAAGAGATGTAAATGACTT+AGG | + | chr3_3:35911618-35911637 | None:intergenic | 25.0% |
| ! | AATACAAGACATTAACAATG+AGG | - | chr3_3:35911767-35911786 | Msa0450490:intron | 25.0% |
| ! | AATACGGTAATAAAGTTTGA+AGG | + | chr3_3:35911888-35911907 | None:intergenic | 25.0% |
| ! | TTAAAATTAAGCTAACCAAC+AGG | - | chr3_3:35912157-35912176 | Msa0450490:CDS | 25.0% |
| ! | CTTATTGATCTATACTTATC+TGG | - | chr3_3:35912192-35912211 | Msa0450490:intron | 25.0% |
| ! | TAATGAGAAGTTATATCCAT+CGG | + | chr3_3:35912271-35912290 | None:intergenic | 25.0% |
| ! | ACAGAAAAGTTACATAAGTT+AGG | + | chr3_3:35912311-35912330 | None:intergenic | 25.0% |
| ! | AATTATTATGATGTGCACTA+TGG | - | chr3_3:35912688-35912707 | Msa0450490:intron | 25.0% |
| ! | ATTATTATGATGTGCACTAT+GGG | - | chr3_3:35912689-35912708 | Msa0450490:intron | 25.0% |
| ! | GGTATACTGCAAAAATAAAT+GGG | - | chr3_3:35912710-35912729 | Msa0450490:intron | 25.0% |
| ! | ACTAGATTACTGAATAAACA+AGG | + | chr3_3:35912777-35912796 | None:intergenic | 25.0% |
| !! | TGTTTGATTTATACCATTAC+AGG | - | chr3_3:35912896-35912915 | Msa0450490:CDS | 25.0% |
| ! | CAAAAAAGATGGAAAAGATA+GGG | - | chr3_3:35913039-35913058 | Msa0450490:CDS | 25.0% |
| !! | TCTAAATTTCTTTTCAACAG+AGG | + | chr3_3:35913122-35913141 | None:intergenic | 25.0% |
| ! | GTTACAATTTATAAGCAATG+GGG | - | chr3_3:35913352-35913371 | Msa0450490:intron | 25.0% |
| ! | GTTTCAAAATAAAGCTGTAT+TGG | - | chr3_3:35913394-35913413 | Msa0450490:intron | 25.0% |
| !! | TATATTGACATTTTATCTGC+TGG | + | chr3_3:35913859-35913878 | None:intergenic | 25.0% |
| ! | ATATATAACAGAATTGCATC+AGG | - | chr3_3:35914209-35914228 | Msa0450490:CDS | 25.0% |
| !! | TATGTGTTATCTGAAATTTG+AGG | + | chr3_3:35914281-35914300 | None:intergenic | 25.0% |
| !! | TGTACATGGTTTTTCTTTTT+TGG | + | chr3_3:35914489-35914508 | None:intergenic | 25.0% |
| ! | TAGAAAATGTAGAAATTTGG+AGG | - | chr3_3:35914563-35914582 | Msa0450490:intron | 25.0% |
| ! | AATAAAAACACATGCTACAT+TGG | + | chr3_3:35915189-35915208 | None:intergenic | 25.0% |
| ! | GATGTTCTGATATGTTGTTT+CGG | - | chr3_3:35910673-35910692 | Msa0450490:three_prime_UTR | 30.0% |
| !! | TCGTTATTTTCCGAAATTTG+AGG | + | chr3_3:35910771-35910790 | None:intergenic | 30.0% |
| ATAACGATTCTACCTTTGTT+TGG | - | chr3_3:35910784-35910803 | Msa0450490:three_prime_UTR | 30.0% | |
| ! | TAACGATTCTACCTTTGTTT+GGG | - | chr3_3:35910785-35910804 | Msa0450490:three_prime_UTR | 30.0% |
| TTCAAACGTTGTCAAAATGA+AGG | + | chr3_3:35910853-35910872 | None:intergenic | 30.0% | |
| !!! | AATTTCTGGTTTTGTTGCAT+AGG | - | chr3_3:35910981-35911000 | Msa0450490:CDS | 30.0% |
| TTATTAACTTTGTGCAGTAG+TGG | - | chr3_3:35911042-35911061 | Msa0450490:intron | 30.0% | |
| ! | TTTTATCATGATCCTAATGC+TGG | - | chr3_3:35911066-35911085 | Msa0450490:intron | 30.0% |
| TTTGTAATAAACACCATCAC+TGG | + | chr3_3:35911106-35911125 | None:intergenic | 30.0% | |
| TGTACCTTTAGATTGCAATA+AGG | - | chr3_3:35911143-35911162 | Msa0450490:intron | 30.0% | |
| ATTTGAACTTATCTATCCAC+TGG | - | chr3_3:35911203-35911222 | Msa0450490:intron | 30.0% | |
| !!! | AGTTTTATTGCTTGTGTTTC+AGG | - | chr3_3:35911686-35911705 | Msa0450490:intron | 30.0% |
| ! | TGTATTTGTTGAGTTCTTTC+AGG | + | chr3_3:35911753-35911772 | None:intergenic | 30.0% |
| ATTGAAACTAACCAACAGAT+AGG | - | chr3_3:35911819-35911838 | Msa0450490:intron | 30.0% | |
| TACAAAGACATCTACTTAGA+AGG | + | chr3_3:35912018-35912037 | None:intergenic | 30.0% | |
| TCATCAATAGAAAAAGGATG+TGG | + | chr3_3:35912118-35912137 | None:intergenic | 30.0% | |
| AGCTTACAGAAATACTGAAA+TGG | - | chr3_3:35912384-35912403 | Msa0450490:CDS | 30.0% | |
| GCTTACAGAAATACTGAAAT+GGG | - | chr3_3:35912385-35912404 | Msa0450490:CDS | 30.0% | |
| TCATTCTATCTCTATGTACT+TGG | - | chr3_3:35912649-35912668 | Msa0450490:intron | 30.0% | |
| GGGTATACTGCAAAAATAAA+TGG | - | chr3_3:35912709-35912728 | Msa0450490:intron | 30.0% | |
| AAGGTTCAAGTAACTAAGAA+GGG | - | chr3_3:35912744-35912763 | Msa0450490:intron | 30.0% | |
| TCTTGTTCGAAGAAGAAAAA+TGG | - | chr3_3:35912921-35912940 | Msa0450490:CDS | 30.0% | |
| ! | CCTATCTTTTCCATCTTTTT+TGG | + | chr3_3:35913041-35913060 | None:intergenic | 30.0% |
| CCAAAAAAGATGGAAAAGAT+AGG | - | chr3_3:35913038-35913057 | Msa0450490:CDS | 30.0% | |
| TTACTCTTGTATTTGCTTAC+TGG | - | chr3_3:35913200-35913219 | Msa0450490:intron | 30.0% | |
| ! | TATTGTCATGCTCTTTTATC+AGG | - | chr3_3:35913465-35913484 | Msa0450490:intron | 30.0% |
| GATGTACTGAATTACATGAA+GGG | + | chr3_3:35913782-35913801 | None:intergenic | 30.0% | |
| TGATGTACTGAATTACATGA+AGG | + | chr3_3:35913783-35913802 | None:intergenic | 30.0% | |
| AAGTGTTAATGCGTATACAT+TGG | + | chr3_3:35914326-35914345 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr3_3:35914438-35914457 | Msa0450490:intron | 30.0% | |
| !!! | GGTTTTTCTTTTTTGGTAGT+GGG | + | chr3_3:35914482-35914501 | None:intergenic | 30.0% |
| !!! | TGGTTTTTCTTTTTTGGTAG+TGG | + | chr3_3:35914483-35914502 | None:intergenic | 30.0% |
| TGTGATGTACAACAATACAT+AGG | + | chr3_3:35915304-35915323 | None:intergenic | 30.0% | |
| ACAATCAAATGCGATTTAAC+TGG | + | chr3_3:35915348-35915367 | None:intergenic | 30.0% | |
| ! | TTTCCGAAATTTGAGGTTCT+GGG | + | chr3_3:35910764-35910783 | None:intergenic | 35.0% |
| !! | TTTTCCGAAATTTGAGGTTC+TGG | + | chr3_3:35910765-35910784 | None:intergenic | 35.0% |
| AAACGTTGTCAAAATGAAGG+TGG | + | chr3_3:35910850-35910869 | None:intergenic | 35.0% | |
| ACAAGCTTGTGCTAAATTTC+TGG | - | chr3_3:35910967-35910986 | Msa0450490:CDS | 35.0% | |
| TGCATAGGTTTATGCATATG+TGG | - | chr3_3:35910996-35911015 | Msa0450490:CDS | 35.0% | |
| CCTACCTTATTGCAATCTAA+AGG | + | chr3_3:35911150-35911169 | None:intergenic | 35.0% | |
| CCTTTAGATTGCAATAAGGT+AGG | - | chr3_3:35911147-35911166 | Msa0450490:intron | 35.0% | |
| AGATTGCAATAAGGTAGGTT+TGG | - | chr3_3:35911152-35911171 | Msa0450490:intron | 35.0% | |
| AATCCAAACAGATGCTTAGA+AGG | + | chr3_3:35911178-35911197 | None:intergenic | 35.0% | |
| TTCTAAGCATCTGTTTGGAT+TGG | - | chr3_3:35911177-35911196 | Msa0450490:intron | 35.0% | |
| CTTATCCAAAAAGGGTCTAA+GGG | - | chr3_3:35911387-35911406 | Msa0450490:intron | 35.0% | |
| !! | TTGTTGAGTTCTTTCAGGTT+TGG | + | chr3_3:35911748-35911767 | None:intergenic | 35.0% |
| ACAAGACATTAACAATGAGG+AGG | - | chr3_3:35911770-35911789 | Msa0450490:intron | 35.0% | |
| TAGTTTCAATTTCGTTTCCG+AGG | + | chr3_3:35911809-35911828 | None:intergenic | 35.0% | |
| TTGAATACTCCTATGCTTTG+AGG | - | chr3_3:35911911-35911930 | Msa0450490:intron | 35.0% | |
| AATGTTGATGCTCAAAGCAA+AGG | + | chr3_3:35911951-35911970 | None:intergenic | 35.0% | |
| !! | TGCTTTGAGCATCAACATTT+TGG | - | chr3_3:35911952-35911971 | Msa0450490:intron | 35.0% |
| CAATAGAAAAAGGATGTGGA+AGG | + | chr3_3:35912114-35912133 | None:intergenic | 35.0% | |
| AACTTCTCATTAGAAGCTGA+TGG | - | chr3_3:35912279-35912298 | Msa0450490:intron | 35.0% | |
| TACAGAAATACTGAAATGGG+AGG | - | chr3_3:35912388-35912407 | Msa0450490:CDS | 35.0% | |
| GATGCTTATCAAGTAGAAGA+AGG | - | chr3_3:35912490-35912509 | Msa0450490:CDS | 35.0% | |
| GATGAAAATCACTTAGCTGA+TGG | - | chr3_3:35912535-35912554 | Msa0450490:CDS | 35.0% | |
| AGTGGAAATACCTTCATCTA+TGG | + | chr3_3:35912566-35912585 | None:intergenic | 35.0% | |
| !! | TAAATGGGTTGTTTCCTTGA+AGG | - | chr3_3:35912725-35912744 | Msa0450490:intron | 35.0% |
| CTTAGTTACTTGAACCTTCA+AGG | + | chr3_3:35912742-35912761 | None:intergenic | 35.0% | |
| GAAGGTTCAAGTAACTAAGA+AGG | - | chr3_3:35912743-35912762 | Msa0450490:intron | 35.0% | |
| !! | AGACACAAAAGCATTTAGCA+GGG | + | chr3_3:35912812-35912831 | None:intergenic | 35.0% |
| TGTTCGAAGAAGAAAAATGG+CGG | - | chr3_3:35912924-35912943 | Msa0450490:CDS | 35.0% | |
| ATGGTCAAGTCATTGAATCA+AGG | - | chr3_3:35912954-35912973 | Msa0450490:CDS | 35.0% | |
| CATTGAATCAAGGAAAGATC+TGG | - | chr3_3:35912964-35912983 | Msa0450490:CDS | 35.0% | |
| AAAAGATGGAAAAGATAGGG+TGG | - | chr3_3:35913042-35913061 | Msa0450490:CDS | 35.0% | |
| TTTCAACAGAGGAGATAGAT+GGG | + | chr3_3:35913111-35913130 | None:intergenic | 35.0% | |
| ! | TTTTCAACAGAGGAGATAGA+TGG | + | chr3_3:35913112-35913131 | None:intergenic | 35.0% |
| CTATTATGAAGTCACATGAG+AGG | - | chr3_3:35913246-35913265 | Msa0450490:intron | 35.0% | |
| !! | TTAGTGCTAGAAGTACTTCT+TGG | - | chr3_3:35913429-35913448 | Msa0450490:intron | 35.0% |
| AGTACTTCTTGGAATGAACA+CGG | - | chr3_3:35913440-35913459 | Msa0450490:intron | 35.0% | |
| ! | ATCCCAATCTTTTGTTGGAT+CGG | + | chr3_3:35913556-35913575 | None:intergenic | 35.0% |
| ! | GGAAAATCCCAATCTTTTGT+TGG | + | chr3_3:35913561-35913580 | None:intergenic | 35.0% |
| TGTAGGAATTTCAGTTGAAG+TGG | + | chr3_3:35913643-35913662 | None:intergenic | 35.0% | |
| CAATTTCCAAGTACAAACCT+TGG | + | chr3_3:35913706-35913725 | None:intergenic | 35.0% | |
| ATTACATGAAGGGTGATCAT+GGG | + | chr3_3:35913772-35913791 | None:intergenic | 35.0% | |
| AATTACATGAAGGGTGATCA+TGG | + | chr3_3:35913773-35913792 | None:intergenic | 35.0% | |
| ! | TTAAAGATGTCATTTGGACC+AGG | - | chr3_3:35914010-35914029 | Msa0450490:intron | 35.0% |
| TATGCCAGAAATCTTCTAGA+AGG | - | chr3_3:35914037-35914056 | Msa0450490:intron | 35.0% | |
| ! | AGAAATCTTCTAGAAGGCAT+GGG | - | chr3_3:35914043-35914062 | Msa0450490:intron | 35.0% |
| AAGCTAATTGGCAATGTCAA+TGG | + | chr3_3:35914189-35914208 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr3_3:35914443-35914462 | Msa0450490:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | - | chr3_3:35914586-35914605 | Msa0450490:intron | 35.0% | |
| !! | CTTTACAAGCCAGTTTTGTA+AGG | + | chr3_3:35914598-35914617 | None:intergenic | 35.0% |
| !! | TACAAAACTGGCTTGTAAAG+TGG | - | chr3_3:35914598-35914617 | Msa0450490:intron | 35.0% |
| !! | ACAAAACTGGCTTGTAAAGT+GGG | - | chr3_3:35914599-35914618 | Msa0450490:intron | 35.0% |
| ! | GTTGAAGGTAAGTTTTTGTG+TGG | + | chr3_3:35915159-35915178 | None:intergenic | 35.0% |
| ! | TGTGAGTGTTGCAAATTCAA+AGG | + | chr3_3:35915235-35915254 | None:intergenic | 35.0% |
| ACTGGATTACCGTGTATTTA+GGG | + | chr3_3:35915330-35915349 | None:intergenic | 35.0% | |
| AACTGGATTACCGTGTATTT+AGG | + | chr3_3:35915331-35915350 | None:intergenic | 35.0% | |
| ATCGCATTTGATTGTGCTAT+TGG | - | chr3_3:35915353-35915372 | Msa0450490:five_prime_UTR | 35.0% | |
| ! | TTGATTGTGCTATTGGTGTT+CGG | - | chr3_3:35915360-35915379 | Msa0450490:five_prime_UTR | 35.0% |
| ! | CGAATTTTCGTCCCAAACAA+AGG | + | chr3_3:35910799-35910818 | None:intergenic | 40.0% |
| AATGAAGGTGGAAAAGAACC+TGG | + | chr3_3:35910838-35910857 | None:intergenic | 40.0% | |
| GCTTATCCAAAAAGGGTCTA+AGG | - | chr3_3:35911386-35911405 | Msa0450490:intron | 40.0% | |
| TAAATGACTTAGGGCCTGTT+TGG | + | chr3_3:35911608-35911627 | None:intergenic | 40.0% | |
| TTCAATTTCGTTTCCGAGGA+AGG | + | chr3_3:35911805-35911824 | None:intergenic | 40.0% | |
| ATCAAGTGTCCTCAAAGCAT+AGG | + | chr3_3:35911923-35911942 | None:intergenic | 40.0% | |
| AGAAAAAGGATGTGGAAGGA+AGG | + | chr3_3:35912110-35912129 | None:intergenic | 40.0% | |
| AAGTGTGTCTTCTAACCTGT+TGG | + | chr3_3:35912175-35912194 | None:intergenic | 40.0% | |
| !! | TTATATCCATCGGTTTCCAC+GGG | + | chr3_3:35912261-35912280 | None:intergenic | 40.0% |
| !! | GTTATATCCATCGGTTTCCA+CGG | + | chr3_3:35912262-35912281 | None:intergenic | 40.0% |
| !!! | TCATGCCATTTTCATCTGCT+GGG | + | chr3_3:35912429-35912448 | None:intergenic | 40.0% |
| ATCAAGTAGAAGAAGGTGAG+TGG | - | chr3_3:35912497-35912516 | Msa0450490:CDS | 40.0% | |
| ! | TGATTTTCATCCTCTGGATC+TGG | + | chr3_3:35912526-35912545 | None:intergenic | 40.0% |
| ! | GCTAAGTGATTTTCATCCTC+TGG | + | chr3_3:35912532-35912551 | None:intergenic | 40.0% |
| GATGGAAGTTCCATAGATGA+AGG | - | chr3_3:35912553-35912572 | Msa0450490:CDS | 40.0% | |
| AGCTTGTGTCTACTACTAAC+TGG | - | chr3_3:35912615-35912634 | Msa0450490:intron | 40.0% | |
| !! | GACACAAAAGCATTTAGCAG+GGG | + | chr3_3:35912811-35912830 | None:intergenic | 40.0% |
| !! | GAGACACAAAAGCATTTAGC+AGG | + | chr3_3:35912813-35912832 | None:intergenic | 40.0% |
| ! | AATGCTTTTGTGTCTCTGCA+TGG | - | chr3_3:35912817-35912836 | Msa0450490:intron | 40.0% |
| TTCGAACAAGATGCCTGTAA+TGG | + | chr3_3:35912912-35912931 | None:intergenic | 40.0% | |
| GTTCGAAGAAGAAAAATGGC+GGG | - | chr3_3:35912925-35912944 | Msa0450490:CDS | 40.0% | |
| !!! | GGTTTTAGAGTTTCCAGTTG+TGG | - | chr3_3:35912985-35913004 | Msa0450490:CDS | 40.0% |
| ! | GTCAGAGCATCCAAAAAAGA+TGG | - | chr3_3:35913028-35913047 | Msa0450490:CDS | 40.0% |
| TGGTCAAACAATCTGCAAAG+CGG | - | chr3_3:35913083-35913102 | Msa0450490:CDS | 40.0% | |
| TTGAGATGTACTTCGCAGAT+AGG | + | chr3_3:35913151-35913170 | None:intergenic | 40.0% | |
| ! | TACTGGTACACGTCTAAAAC+AGG | - | chr3_3:35913217-35913236 | Msa0450490:intron | 40.0% |
| TATAAGCAATGGGGATAGTG+TGG | - | chr3_3:35913361-35913380 | Msa0450490:intron | 40.0% | |
| TGCCGATCCAACAAAAGATT+GGG | - | chr3_3:35913551-35913570 | Msa0450490:CDS | 40.0% | |
| GGAATTTCAGTTGAAGTGGA+AGG | + | chr3_3:35913639-35913658 | None:intergenic | 40.0% | |
| TTGGATACAGAAAGCTGACT+TGG | + | chr3_3:35913687-35913706 | None:intergenic | 40.0% | |
| AAGTCAGCTTTCTGTATCCA+AGG | - | chr3_3:35913686-35913705 | Msa0450490:intron | 40.0% | |
| CTGTATCCAAGGTTTGTACT+TGG | - | chr3_3:35913697-35913716 | Msa0450490:intron | 40.0% | |
| ATGTCAATATAGAGATCGCG+CGG | - | chr3_3:35913868-35913887 | Msa0450490:intron | 40.0% | |
| GCTGAAAGAAGAATCTTGCA+TGG | - | chr3_3:35913890-35913909 | Msa0450490:intron | 40.0% | |
| GAAAGAAGAATCTTGCATGG+TGG | - | chr3_3:35913893-35913912 | Msa0450490:intron | 40.0% | |
| ! | GAGGCGTTAAAGATGTCATT+TGG | - | chr3_3:35914004-35914023 | Msa0450490:CDS | 40.0% |
| !! | AGATTTCTGGCATAACTACC+TGG | + | chr3_3:35914031-35914050 | None:intergenic | 40.0% |
| ! | CATGCCTTCTAGAAGATTTC+TGG | + | chr3_3:35914044-35914063 | None:intergenic | 40.0% |
| ! | CAGAAATCTTCTAGAAGGCA+TGG | - | chr3_3:35914042-35914061 | Msa0450490:intron | 40.0% |
| GCATAAAATATGCAAGGTCC+GGG | - | chr3_3:35914444-35914463 | Msa0450490:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr3_3:35914445-35914464 | Msa0450490:intron | 40.0% | |
| !! | CAAAACTGGCTTGTAAAGTG+GGG | - | chr3_3:35914600-35914619 | Msa0450490:intron | 40.0% |
| AGAGTCCTATCTAACTGATG+TGG | - | chr3_3:35914652-35914671 | Msa0450490:intron | 40.0% | |
| GAGTCCTATCTAACTGATGT+GGG | - | chr3_3:35914653-35914672 | Msa0450490:intron | 40.0% | |
| TAGTCCCACATCAGTTAGAT+AGG | + | chr3_3:35914660-35914679 | None:intergenic | 40.0% | |
| GCAACTCAAATGTCGCAATT+AGG | - | chr3_3:35914694-35914713 | Msa0450490:intron | 40.0% | |
| GCAACTCAAATGTCGCAATT+AGG | - | chr3_3:35914694-35914713 | Msa0450490:intron | 40.0% | |
| ATGTTTCCAACTGGCTGAAT+AGG | + | chr3_3:35915079-35915098 | None:intergenic | 40.0% | |
| ATTCAGCCAGTTGGAAACAT+TGG | - | chr3_3:35915079-35915098 | Msa0450490:intron | 40.0% | |
| AAACACATGCTACATTGGTC+TGG | + | chr3_3:35915184-35915203 | None:intergenic | 40.0% | |
| ATCACACTCCCCTAAATACA+CGG | - | chr3_3:35915318-35915337 | Msa0450490:five_prime_UTR | 40.0% | |
| CTGGATTACCGTGTATTTAG+GGG | + | chr3_3:35915329-35915348 | None:intergenic | 40.0% | |
| ! | TGATTGTGCTATTGGTGTTC+GGG | - | chr3_3:35915361-35915380 | Msa0450490:five_prime_UTR | 40.0% |
| GGACCCAGAACCTCAAATTT+CGG | - | chr3_3:35910758-35910777 | Msa0450490:three_prime_UTR | 45.0% | |
| ATCATGATCCTAATGCTGGC+TGG | - | chr3_3:35911070-35911089 | Msa0450490:intron | 45.0% | |
| CTATAGTACCAGCCAGCATT+AGG | + | chr3_3:35911081-35911100 | None:intergenic | 45.0% | |
| TGGTACTATAGCACCAGTGA+TGG | - | chr3_3:35911090-35911109 | Msa0450490:intron | 45.0% | |
| TGGCCTTCTAAGCATCTGTT+TGG | - | chr3_3:35911172-35911191 | Msa0450490:intron | 45.0% | |
| ! | AACGACCCTTAGACCCTTTT+TGG | + | chr3_3:35911395-35911414 | None:intergenic | 45.0% |
| AAAAGGGTCTAAGGGTCGTT+TGG | - | chr3_3:35911395-35911414 | Msa0450490:intron | 45.0% | |
| GAGGATTGTTCTTCCTTCCT+CGG | - | chr3_3:35911789-35911808 | Msa0450490:intron | 45.0% | |
| AAAAGGATGTGGAAGGAAGG+AGG | + | chr3_3:35912107-35912126 | None:intergenic | 45.0% | |
| !! | TATATCCATCGGTTTCCACG+GGG | + | chr3_3:35912260-35912279 | None:intergenic | 45.0% |
| ATACTGAAATGGGAGGTGAC+TGG | - | chr3_3:35912395-35912414 | Msa0450490:CDS | 45.0% | |
| !!! | GTCATGCCATTTTCATCTGC+TGG | + | chr3_3:35912430-35912449 | None:intergenic | 45.0% |
| ATGCAATCTCACTCATGGTG+TGG | + | chr3_3:35912860-35912879 | None:intergenic | 45.0% | |
| TAGGCATGCAATCTCACTCA+TGG | + | chr3_3:35912865-35912884 | None:intergenic | 45.0% | |
| AGTTTCCAGTTGTGGACTTG+TGG | - | chr3_3:35912993-35913012 | Msa0450490:CDS | 45.0% | |
| GTTTCCAGTTGTGGACTTGT+GGG | - | chr3_3:35912994-35913013 | Msa0450490:CDS | 45.0% | |
| ATGGAAAAGATAGGGTGGCA+AGG | - | chr3_3:35913047-35913066 | Msa0450490:CDS | 45.0% | |
| AAAAGATAGGGTGGCAAGGT+TGG | - | chr3_3:35913051-35913070 | Msa0450490:CDS | 45.0% | |
| CTGCGAAGTACATCTCAATC+TGG | - | chr3_3:35913153-35913172 | Msa0450490:intron | 45.0% | |
| AATCTGGTACGCGTCAAAAC+AGG | - | chr3_3:35913169-35913188 | Msa0450490:intron | 45.0% | |
| AAACCCAAGTGCGAGATATG+TGG | - | chr3_3:35913506-35913525 | Msa0450490:CDS | 45.0% | |
| AAGCCACATATCTCGCACTT+GGG | + | chr3_3:35913512-35913531 | None:intergenic | 45.0% | |
| CTGCCGATCCAACAAAAGAT+TGG | - | chr3_3:35913550-35913569 | Msa0450490:CDS | 45.0% | |
| GTGGGTAAATCTTTCGCTGT+AGG | + | chr3_3:35913660-35913679 | None:intergenic | 45.0% | |
| AGAATCTTGCATGGTGGCTT+TGG | - | chr3_3:35913899-35913918 | Msa0450490:intron | 45.0% | |
| TCCAGAAGAAGCTACAGAAG+AGG | - | chr3_3:35913985-35914004 | Msa0450490:CDS | 45.0% | |
| TGAGCTTAGCTCAGTTGGTT+GGG | - | chr3_3:35914416-35914435 | Msa0450490:intron | 45.0% | |
| !! | ACATTTGAGTTGCCTCGTGT+TGG | + | chr3_3:35914687-35914706 | None:intergenic | 45.0% |
| AATGTCGCAATTAGGCGACT+AGG | - | chr3_3:35914702-35914721 | Msa0450490:intron | 45.0% | |
| ATGTCGCAATTAGGCGACTA+GGG | - | chr3_3:35914703-35914722 | Msa0450490:intron | 45.0% | |
| AGGCGGAATTTCCAATGATG+TGG | - | chr3_3:35914740-35914759 | Msa0450490:intron | 45.0% | |
| GGCGGAATTTCCAATGATGT+GGG | - | chr3_3:35914741-35914760 | Msa0450490:intron | 45.0% | |
| ! | GGCTTTTAGTCCCACATCAT+TGG | + | chr3_3:35914754-35914773 | None:intergenic | 45.0% |
| !! | ACATTTGAGTTGCCTCGTGT+TGG | + | chr3_3:35914687-35914706 | None:intergenic | 45.0% |
| AATGTCGCAATTAGGCGACT+AGG | - | chr3_3:35914702-35914721 | Msa0450490:intron | 45.0% | |
| ATGTCGCAATTAGGCGACTA+GGG | - | chr3_3:35914703-35914722 | Msa0450490:intron | 45.0% | |
| GGACTTGGCAGTTCAACAAA+AGG | - | chr3_3:35915043-35915062 | Msa0450490:intron | 45.0% | |
| TGGCAGTTCAACAAAAGGCT+TGG | - | chr3_3:35915048-35915067 | Msa0450490:intron | 45.0% | |
| CAGTTCAACAAAAGGCTTGG+TGG | - | chr3_3:35915051-35915070 | Msa0450490:intron | 45.0% | |
| ! | TACATTGGTCTGGTGGTTGA+AGG | + | chr3_3:35915174-35915193 | None:intergenic | 45.0% |
| !! | AAAATAATTAAATTATAGAA+TGG | + | chr3_3:35914970-35914989 | None:intergenic | 5.0% |
| CGCAACTTTACTTTCACGCC+AGG | - | chr3_3:35910817-35910836 | Msa0450490:three_prime_UTR | 50.0% | |
| CTCACAAGTGCTTATGCCAG+TGG | + | chr3_3:35911222-35911241 | None:intergenic | 50.0% | |
| GGTCTAAGGGTCGTTTGGAT+TGG | - | chr3_3:35911400-35911419 | Msa0450490:intron | 50.0% | |
| CGGTCAAGGTTCCTATCTGT+TGG | + | chr3_3:35911833-35911852 | None:intergenic | 50.0% | |
| ACAGATAGGAACCTTGACCG+AGG | - | chr3_3:35911833-35911852 | Msa0450490:intron | 50.0% | |
| TCCACGAACAGTCCAACTTG+TGG | - | chr3_3:35912053-35912072 | Msa0450490:CDS | 50.0% | |
| ! | TCCACAAGTTGGACTGTTCG+TGG | + | chr3_3:35912057-35912076 | None:intergenic | 50.0% |
| GAAGGAGGATACCATTCCGA+CGG | + | chr3_3:35912092-35912111 | None:intergenic | 50.0% | |
| ! | ATTTTCATCTGCTGGGCCTG+TGG | + | chr3_3:35912422-35912441 | None:intergenic | 50.0% |
| ACAGGCCCAGCAGATGAAAA+TGG | - | chr3_3:35912421-35912440 | Msa0450490:CDS | 50.0% | |
| ! | TGAGTGGATTCCAGATCCAG+AGG | - | chr3_3:35912513-35912532 | Msa0450490:CDS | 50.0% |
| CCTTAGACTTGCGAGCAAAG+TGG | + | chr3_3:35912584-35912603 | None:intergenic | 50.0% | |
| CCACTTTGCTCGCAAGTCTA+AGG | - | chr3_3:35912581-35912600 | Msa0450490:intron | 50.0% | |
| !! | GAAAAATGGCGGGCTCAGTA+TGG | - | chr3_3:35912935-35912954 | Msa0450490:CDS | 50.0% |
| AGTTGTGGACTTGTGGGACT+GGG | - | chr3_3:35913000-35913019 | Msa0450490:CDS | 50.0% | |
| TGGGGATAGTGTGGCTTACA+TGG | - | chr3_3:35913370-35913389 | Msa0450490:intron | 50.0% | |
| GAAGCCACATATCTCGCACT+TGG | + | chr3_3:35913513-35913532 | None:intergenic | 50.0% | |
| !! | GAAAGCTGACTTGGCAACGT+GGG | + | chr3_3:35913678-35913697 | None:intergenic | 50.0% |
| !! | AGAAAGCTGACTTGGCAACG+TGG | + | chr3_3:35913679-35913698 | None:intergenic | 50.0% |
| AGGGTGATCATGGGAGAGAA+GGG | + | chr3_3:35913763-35913782 | None:intergenic | 50.0% | |
| AAGGGTGATCATGGGAGAGA+AGG | + | chr3_3:35913764-35913783 | None:intergenic | 50.0% | |
| !! | TTGCATGGTGGCTTTGGTGT+TGG | - | chr3_3:35913905-35913924 | Msa0450490:intron | 50.0% |
| ACACCAAGATTCTTCTGCCC+TGG | + | chr3_3:35913932-35913951 | None:intergenic | 50.0% | |
| ! | GGGCAGAAGAATCTTGGTGT+CGG | - | chr3_3:35913932-35913951 | Msa0450490:intron | 50.0% |
| GCTTCTTCTGGACAAGCATC+AGG | + | chr3_3:35913977-35913996 | None:intergenic | 50.0% | |
| GCCTCTTCTGTAGCTTCTTC+TGG | + | chr3_3:35913989-35914008 | None:intergenic | 50.0% | |
| ! | ATCTTCTAGAAGGCATGGGC+TGG | - | chr3_3:35914047-35914066 | Msa0450490:intron | 50.0% |
| ! | GAGGTATGGACTGAGTTCTC+TGG | - | chr3_3:35914073-35914092 | Msa0450490:intron | 50.0% |
| TGCATCAGGTCATCATCACC+AGG | - | chr3_3:35914223-35914242 | Msa0450490:CDS | 50.0% | |
| GCATCAGGTCATCATCACCA+GGG | - | chr3_3:35914224-35914243 | Msa0450490:CDS | 50.0% | |
| AAGCTCACGAGGACTGTACA+TGG | + | chr3_3:35914403-35914422 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | - | chr3_3:35914415-35914434 | Msa0450490:intron | 50.0% | |
| AGTGGGCAGAATTTGAACCC+CGG | + | chr3_3:35914465-35914484 | None:intergenic | 50.0% | |
| TGGGACTAAAAGCCAACACG+AGG | - | chr3_3:35914672-35914691 | Msa0450490:intron | 50.0% | |
| TGTCGCAATTAGGCGACTAG+GGG | - | chr3_3:35914704-35914723 | Msa0450490:intron | 50.0% | |
| CTAGGGGCAGATCGCAATAA+AGG | - | chr3_3:35914720-35914739 | Msa0450490:intron | 50.0% | |
| TGGGACTAAAAGCCAACACG+AGG | - | chr3_3:35914672-35914691 | Msa0450490:intron | 50.0% | |
| TGTCGCAATTAGGCGACTAG+GGG | - | chr3_3:35914704-35914723 | Msa0450490:intron | 50.0% | |
| CTAGGGGCAGATCGCAATAA+AGG | - | chr3_3:35914720-35914739 | Msa0450490:intron | 50.0% | |
| AAGTCCTTCTCCCTGCACAA+GGG | + | chr3_3:35915029-35915048 | None:intergenic | 50.0% | |
| GTGGAACCTATTCAGCCAGT+TGG | - | chr3_3:35915070-35915089 | Msa0450490:intron | 50.0% | |
| GCACTGCCAATGTTTCCAAC+TGG | + | chr3_3:35915088-35915107 | None:intergenic | 50.0% | |
| GTTGGAAACATTGGCAGTGC+AGG | - | chr3_3:35915088-35915107 | Msa0450490:intron | 50.0% | |
| AAACATTGGCAGTGCAGGCT+TGG | - | chr3_3:35915093-35915112 | Msa0450490:intron | 50.0% | |
| AACATTGGCAGTGCAGGCTT+GGG | - | chr3_3:35915094-35915113 | Msa0450490:intron | 50.0% | |
| ! | CACATGCTACATTGGTCTGG+TGG | + | chr3_3:35915181-35915200 | None:intergenic | 50.0% |
| CAGCCACTTGCGTTAGATCT+CGG | - | chr3_3:35915267-35915286 | Msa0450490:CDS | 50.0% | |
| GAACCTTGACCGAGGAAGCA+GGG | - | chr3_3:35911841-35911860 | Msa0450490:intron | 55.0% | |
| AACCTTGACCGAGGAAGCAG+GGG | - | chr3_3:35911842-35911861 | Msa0450490:intron | 55.0% | |
| CTTACCATCCCCTGCTTCCT+CGG | + | chr3_3:35911853-35911872 | None:intergenic | 55.0% | |
| GGTGGAGGGTTTCCACAAGT+TGG | + | chr3_3:35912068-35912087 | None:intergenic | 55.0% | |
| TGATACAGTGACAGACCCCG+TGG | - | chr3_3:35912242-35912261 | Msa0450490:intron | 55.0% | |
| AGCATTTAGCAGGGGACTCG+AGG | + | chr3_3:35912803-35912822 | None:intergenic | 55.0% | |
| CAGTCCCACAAGTCCACAAC+TGG | + | chr3_3:35913001-35913020 | None:intergenic | 55.0% | |
| CAGTTGTGGACTTGTGGGAC+TGG | - | chr3_3:35912999-35913018 | Msa0450490:CDS | 55.0% | |
| GGACTTGTGGGACTGGGAAA+TGG | - | chr3_3:35913006-35913025 | Msa0450490:CDS | 55.0% | |
| ! | GATAGGGTGGCAAGGTTGGT+TGG | - | chr3_3:35913055-35913074 | Msa0450490:CDS | 55.0% |
| ! | GGCAAGGTTGGTTGGAAGAC+TGG | - | chr3_3:35913063-35913082 | Msa0450490:CDS | 55.0% |
| !! | GTGGCTTTGGTGTTGGTCCA+GGG | - | chr3_3:35913912-35913931 | Msa0450490:intron | 55.0% |
| GGTCCAGGGCAGAAGAATCT+TGG | - | chr3_3:35913926-35913945 | Msa0450490:intron | 55.0% | |
| !! | TCTAGAAGGCATGGGCTGGA+AGG | - | chr3_3:35914051-35914070 | Msa0450490:intron | 55.0% |
| TCAGGTCATCATCACCAGGG+CGG | - | chr3_3:35914227-35914246 | Msa0450490:CDS | 55.0% | |
| TATTATCACACACCCCGCCC+TGG | + | chr3_3:35914244-35914263 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr3_3:35914414-35914433 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr3_3:35914411-35914430 | Msa0450490:intron | 55.0% | |
| GGGGCAGATCGCAATAAAGG+CGG | - | chr3_3:35914723-35914742 | Msa0450490:intron | 55.0% | |
| GGGGCAGATCGCAATAAAGG+CGG | - | chr3_3:35914723-35914742 | Msa0450490:intron | 55.0% | |
| CAAGTCCTTCTCCCTGCACA+AGG | + | chr3_3:35915030-35915049 | None:intergenic | 55.0% | |
| CTTGTGCAGGGAGAAGGACT+TGG | - | chr3_3:35915028-35915047 | Msa0450490:intron | 55.0% | |
| ACATTGGCAGTGCAGGCTTG+GGG | - | chr3_3:35915095-35915114 | Msa0450490:intron | 55.0% | |
| !! | GTCAGCCTTGTTCATCGACG+AGG | + | chr3_3:35915124-35915143 | None:intergenic | 55.0% |
| CGAGATCTAACGCAAGTGGC+TGG | + | chr3_3:35915269-35915288 | None:intergenic | 55.0% | |
| CCACCGAGATCTAACGCAAG+TGG | + | chr3_3:35915273-35915292 | None:intergenic | 55.0% | |
| CCACTTGCGTTAGATCTCGG+TGG | - | chr3_3:35915270-35915289 | Msa0450490:CDS | 55.0% | |
| GGAACCTTGACCGAGGAAGC+AGG | - | chr3_3:35911840-35911859 | Msa0450490:intron | 60.0% | |
| ATCCCCTGCTTCCTCGGTCA+AGG | + | chr3_3:35911847-35911866 | None:intergenic | 60.0% | |
| TTGACCGAGGAAGCAGGGGA+TGG | - | chr3_3:35911846-35911865 | Msa0450490:intron | 60.0% | |
| GGAGGATACCATTCCGACGG+CGG | + | chr3_3:35912089-35912108 | None:intergenic | 60.0% | |
| ACAGACCCCGTGGAAACCGA+TGG | - | chr3_3:35912252-35912271 | Msa0450490:intron | 60.0% | |
| ATGGGAGGTGACTGGACCAC+AGG | - | chr3_3:35912403-35912422 | Msa0450490:CDS | 60.0% | |
| !! | GGTGGCTTTGGTGTTGGTCC+AGG | - | chr3_3:35913911-35913930 | Msa0450490:intron | 60.0% |
| !! | AGAAGGCATGGGCTGGAAGG+AGG | - | chr3_3:35914054-35914073 | Msa0450490:intron | 60.0% |
| !! | GCATGGGCTGGAAGGAGGTA+TGG | - | chr3_3:35914059-35914078 | Msa0450490:intron | 60.0% |
| CAGGTCATCATCACCAGGGC+GGG | - | chr3_3:35914228-35914247 | Msa0450490:CDS | 60.0% | |
| AGGTCATCATCACCAGGGCG+GGG | - | chr3_3:35914229-35914248 | Msa0450490:CDS | 60.0% | |
| TTCTGTTCCCGCCCTTGTGC+AGG | - | chr3_3:35915015-35915034 | Msa0450490:intron | 60.0% | |
| TCTGTTCCCGCCCTTGTGCA+GGG | - | chr3_3:35915016-35915035 | Msa0450490:intron | 60.0% | |
| TCCTTCTCCCTGCACAAGGG+CGG | + | chr3_3:35915026-35915045 | None:intergenic | 60.0% | |
| GGTGGCCTCGTCGATGAACA+AGG | - | chr3_3:35915116-35915135 | Msa0450490:intron | 60.0% | |
| ACGCAAGTGGCTGGTGCGTA+GGG | + | chr3_3:35915260-35915279 | None:intergenic | 60.0% | |
| AACGCAAGTGGCTGGTGCGT+AGG | + | chr3_3:35915261-35915280 | None:intergenic | 60.0% | |
| TGGAAACCCTCCACCGCCGT+CGG | - | chr3_3:35912073-35912092 | Msa0450490:CDS | 65.0% | |
| ACCATTCCGACGGCGGTGGA+GGG | + | chr3_3:35912082-35912101 | None:intergenic | 65.0% | |
| TACCATTCCGACGGCGGTGG+AGG | + | chr3_3:35912083-35912102 | None:intergenic | 65.0% | |
| GGATACCATTCCGACGGCGG+TGG | + | chr3_3:35912086-35912105 | None:intergenic | 65.0% | |
| CCTTCTCCCTGCACAAGGGC+GGG | + | chr3_3:35915025-35915044 | None:intergenic | 65.0% | |
| TTGGCAGTGCAGGCTTGGGG+TGG | - | chr3_3:35915098-35915117 | Msa0450490:intron | 65.0% | |
| ACCCTCCACCGCCGTCGGAA+TGG | - | chr3_3:35912078-35912097 | Msa0450490:CDS | 70.0% | |
| CCCGCCCTTGTGCAGGGAGA+AGG | - | chr3_3:35915022-35915041 | Msa0450490:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 35910657 | 35915408 | 35910657 | ID=Msa0450490;Name=Msa0450490 |
| chr3_3 | mRNA | 35910657 | 35915408 | 35910657 | ID=Msa0450490-mRNA-1;Parent=Msa0450490;Name=Msa0450490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=99|0.77|0.8|1|1|1|10|276|499 |
| chr3_3 | exon | 35910657 | 35911055 | 35910657 | ID=Msa0450490-mRNA-1:exon:6606;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35911990 | 35912205 | 35911990 | ID=Msa0450490-mRNA-1:exon:6605;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35912358 | 35912578 | 35912358 | ID=Msa0450490-mRNA-1:exon:6604;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35912875 | 35913147 | 35912875 | ID=Msa0450490-mRNA-1:exon:6603;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35913491 | 35913679 | 35913491 | ID=Msa0450490-mRNA-1:exon:6602;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35913765 | 35913886 | 35913765 | ID=Msa0450490-mRNA-1:exon:6601;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35913966 | 35914023 | 35913966 | ID=Msa0450490-mRNA-1:exon:6600;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35914198 | 35914357 | 35914198 | ID=Msa0450490-mRNA-1:exon:6599;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35914952 | 35915006 | 35914952 | ID=Msa0450490-mRNA-1:exon:6598;Parent=Msa0450490-mRNA-1 |
| chr3_3 | exon | 35915227 | 35915408 | 35915227 | ID=Msa0450490-mRNA-1:exon:6597;Parent=Msa0450490-mRNA-1 |
| chr3_3 | five_prime_UTR | 35915310 | 35915408 | 35915310 | ID=Msa0450490-mRNA-1:five_prime_utr;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35915227 | 35915309 | 35915227 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35914952 | 35915006 | 35914952 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35914198 | 35914357 | 35914198 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35913966 | 35914023 | 35913966 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35913765 | 35913886 | 35913765 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35913491 | 35913679 | 35913491 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35912875 | 35913147 | 35912875 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35912358 | 35912578 | 35912358 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35911990 | 35912205 | 35911990 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | CDS | 35910933 | 35911055 | 35910933 | ID=Msa0450490-mRNA-1:cds;Parent=Msa0450490-mRNA-1 |
| chr3_3 | three_prime_UTR | 35910657 | 35910932 | 35910657 | ID=Msa0450490-mRNA-1:three_prime_utr;Parent=Msa0450490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
