AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466290 MtrunA17_Chr3g0118771 92.405 395 30 0 2 396 100 494 0.0 769
Msa0466290 MtrunA17_Chr3g0118691 80.506 395 77 0 2 396 94 488 0.0 679
Msa0466290 MtrunA17_Chr3g0118711 79.695 394 80 0 2 395 92 485 0.0 676
Msa0466290 MtrunA17_Chr3g0118671 78.680 394 84 0 2 395 85 478 0.0 672
Msa0466290 MtrunA17_Chr3g0118751 82.532 395 40 2 2 396 85 450 0.0 666
Msa0466290 MtrunA17_Chr3g0118701 77.215 395 90 0 2 396 94 488 0.0 665
Msa0466290 MtrunA17_Chr3g0118721 82.712 295 51 0 102 396 1 295 0.0 523
Msa0466290 MtrunA17_Chr3g0118661 62.278 395 148 1 2 396 92 485 8.42e-176 499
Msa0466290 MtrunA17_Chr5g0426431 51.662 391 184 4 2 391 92 478 1.15e-147 427
Msa0466290 MtrunA17_Chr3g0092641 50.895 391 187 4 2 391 92 478 9.19e-145 419
Msa0466290 MtrunA17_Chr3g0078841 47.949 390 201 2 2 391 91 478 3.57e-137 400
Msa0466290 MtrunA17_Chr6g0454201 49.873 393 191 4 2 391 92 481 1.66e-135 396
Msa0466290 MtrunA17_Chr6g0454331 49.364 393 193 3 2 391 90 479 3.79e-135 395
Msa0466290 MtrunA17_Chr6g0454191 47.328 393 201 4 2 391 92 481 6.47e-134 392
Msa0466290 MtrunA17_Chr6g0454341 46.667 390 206 2 2 391 91 478 1.94e-133 391
Msa0466290 MtrunA17_Chr8g0336331 48.346 393 195 3 2 391 90 477 8.34e-133 389
Msa0466290 MtrunA17_Chr6g0454401 47.970 394 197 4 2 391 92 481 2.61e-132 388
Msa0466290 MtrunA17_Chr2g0278711 47.959 392 197 4 2 391 91 477 4.21e-132 387
Msa0466290 MtrunA17_Chr6g0454211 48.731 394 194 4 2 391 378 767 2.44e-131 395
Msa0466290 MtrunA17_Chr6g0454211 34.862 327 128 4 64 390 26 267 1.87e-55 195
Msa0466290 MtrunA17_Chr6g0454291 47.837 393 199 3 2 391 88 477 9.34e-131 384
Msa0466290 MtrunA17_Chr4g0050341 46.056 393 208 2 2 390 98 490 9.74e-130 382
Msa0466290 MtrunA17_Chr6g0453951 46.565 393 204 3 2 391 138 527 1.04e-129 383
Msa0466290 MtrunA17_Chr6g0454321 46.272 389 204 3 2 390 91 474 7.39e-129 385
Msa0466290 MtrunA17_Chr6g0454181 45.524 391 207 3 4 391 93 480 2.82e-128 378
Msa0466290 MtrunA17_Chr6g0454361 46.447 394 203 4 2 391 92 481 2.15e-127 375
Msa0466290 MtrunA17_Chr6g0453961 46.193 394 205 4 2 391 100 490 5.12e-127 375
Msa0466290 MtrunA17_Chr6g0454301 47.179 390 204 2 2 391 344 731 6.03e-126 380
Msa0466290 MtrunA17_Chr6g0454301 54.585 229 101 2 161 389 3 228 7.42e-86 276
Msa0466290 MtrunA17_Chr6g0454121 45.641 390 206 3 5 391 93 479 1.07e-123 366
Msa0466290 MtrunA17_Chr8g0359821 45.619 388 205 3 7 391 94 478 1.10e-123 366
Msa0466290 MtrunA17_Chr6g0452771 45.802 393 207 3 2 391 91 480 1.66e-122 363
Msa0466290 MtrunA17_Chr6g0454351 45.293 393 192 4 2 391 93 465 4.96e-122 361
Msa0466290 MtrunA17_Chr6g0454151 45.455 396 208 4 2 394 91 481 6.32e-121 359
Msa0466290 MtrunA17_Chr6g0454131 44.241 382 207 3 13 391 101 479 5.20e-119 354
Msa0466290 MtrunA17_Chr7g0217881 43.655 394 196 5 2 391 91 462 4.45e-116 346
Msa0466290 MtrunA17_Chr6g0454261 44.619 381 205 3 14 391 103 480 1.96e-115 345
Msa0466290 MtrunA17_Chr5g0426401 51.282 312 145 5 83 391 4 311 1.25e-113 334
Msa0466290 MtrunA17_Chr6g0454141 41.730 393 223 3 2 391 91 480 2.57e-111 334
Msa0466290 MtrunA17_Chr5g0423981 44.162 394 177 7 2 391 91 445 4.08e-110 330
Msa0466290 MtrunA17_Chr6g0454271 52.069 290 136 2 102 391 1 287 3.52e-107 317
Msa0466290 MtrunA17_Chr8g0355011 38.889 396 192 4 1 391 12 362 4.93e-99 299
Msa0466290 MtrunA17_Chr6g0454251 44.051 311 168 3 2 309 88 395 1.55e-93 286
Msa0466290 MtrunA17_Chr6g0454171 40.964 332 145 5 64 391 26 310 5.47e-89 271
Msa0466290 MtrunA17_Chr6g0454221 54.077 233 105 2 161 393 3 233 8.94e-89 270
Msa0466290 MtrunA17_Chr3g0112771 35.204 392 232 6 2 391 81 452 5.87e-77 245
Msa0466290 MtrunA17_Chr5g0412131 36.188 362 219 7 30 388 115 467 6.78e-73 235
Msa0466290 MtrunA17_Chr3g0112761 34.286 385 233 8 10 391 83 450 8.09e-68 221
Msa0466290 MtrunA17_Chr5g0412101 35.359 362 223 6 30 388 115 468 1.57e-67 221
Msa0466290 MtrunA17_Chr5g0412111 33.149 362 228 7 30 388 109 459 1.23e-66 218
Msa0466290 MtrunA17_Chr6g0454371 54.070 172 78 1 220 391 1 171 3.65e-64 202
Msa0466290 MtrunA17_Chr4g0032331 33.671 395 228 10 10 395 85 454 2.84e-63 209
Msa0466290 MtrunA17_Chr6g0454231 41.406 256 108 4 137 391 5 219 5.83e-58 196
Msa0466290 MtrunA17_Chr6g0454231 35.374 147 95 0 2 148 331 477 1.01e-24 105
Msa0466290 MtrunA17_Chr7g0249981 32.275 378 218 9 30 396 122 472 7.31e-58 196
Msa0466290 MtrunA17_Chr7g0250001 28.982 383 246 7 14 392 89 449 1.18e-57 195
Msa0466290 MtrunA17_Chr8g0336261 59.124 137 55 1 220 356 1 136 3.89e-57 183
Msa0466290 MtrunA17_Chr6g0453981 39.914 233 135 3 41 272 3 231 8.81e-57 186
Msa0466290 MtrunA17_Chr3g0098111 28.906 384 247 7 22 396 109 475 2.64e-56 192
Msa0466290 MtrunA17_Chr5g0414331 31.017 403 243 8 1 394 81 457 3.41e-56 191
Msa0466290 MtrunA17_Chr8g0365811 31.043 393 234 11 6 379 572 946 4.07e-56 198
Msa0466290 MtrunA17_Chr8g0365811 29.143 350 216 10 30 365 119 450 3.28e-46 170
Msa0466290 MtrunA17_Chr4g0044511 39.483 271 145 5 135 390 238 504 7.90e-56 191
Msa0466290 MtrunA17_Chr5g0414321 32.172 373 224 8 29 394 105 455 1.59e-55 189
Msa0466290 MtrunA17_Chr1g0207981 30.027 373 236 9 26 391 119 473 1.87e-54 187
Msa0466290 MtrunA17_Chr6g0464921 31.008 387 230 9 14 390 96 455 3.05e-54 186
Msa0466290 MtrunA17_Chr1g0207931 36.437 247 146 3 140 379 244 486 4.03e-54 187
Msa0466290 MtrunA17_Chr1g0207951 30.789 380 231 9 22 393 218 573 8.36e-54 192
Msa0466290 MtrunA17_Chr1g0207951 29.870 385 234 9 22 396 756 1114 1.65e-52 188
Msa0466290 MtrunA17_Chr6g0453941 47.340 188 96 2 64 250 78 263 1.22e-53 179
Msa0466290 MtrunA17_Chr6g0464871 31.525 387 229 10 16 393 110 469 3.12e-53 183
Msa0466290 MtrunA17_Chr1g0207861 30.670 388 240 9 13 390 100 468 4.28e-53 183
Msa0466290 MtrunA17_Chr1g0161351 30.334 389 240 9 13 390 129 497 9.39e-53 183
Msa0466290 MtrunA17_Chr6g0464841 31.701 388 225 10 14 390 96 454 1.09e-51 179
Msa0466290 MtrunA17_Chr1g0207971 28.684 380 240 8 22 393 100 456 1.15e-51 179
Msa0466290 MtrunA17_Chr7g0218791 31.738 397 222 13 5 389 87 446 2.02e-50 175
Msa0466290 MtrunA17_Chr4g0053321 36.641 262 148 6 144 394 229 483 5.94e-50 175
Msa0466290 MtrunA17_Chr1g0207831 28.382 377 239 7 29 396 115 469 8.65e-50 174
Msa0466290 MtrunA17_Chr7g0218811 29.199 387 239 9 5 387 91 446 1.49e-49 173
Msa0466290 MtrunA17_Chr6g0464861 31.606 386 228 10 14 390 95 453 1.58e-49 173
Msa0466290 MtrunA17_Chr8g0373301 29.974 387 227 8 19 386 101 462 1.94e-49 173
Msa0466290 MtrunA17_Chr6g0464881 29.602 402 237 10 4 391 86 455 2.20e-49 173
Msa0466290 MtrunA17_Chr5g0401721 30.887 327 203 10 81 394 159 475 4.38e-49 172
Msa0466290 MtrunA17_Chr7g0218821 29.124 388 238 11 5 387 92 447 1.15e-48 171
Msa0466290 MtrunA17_Chr7g0218831 30.688 378 227 9 14 387 90 436 1.47e-48 170
Msa0466290 MtrunA17_Chr8g0377921 29.381 388 235 10 19 387 93 460 2.10e-48 171
Msa0466290 MtrunA17_Chr4g0053501 33.226 310 182 9 99 394 170 468 3.54e-48 171
Msa0466290 MtrunA17_Chr7g0249961 34.583 240 138 5 161 392 33 261 8.69e-48 164
Msa0466290 MtrunA17_Chr8g0339631 29.474 380 224 9 21 379 101 457 2.52e-47 168
Msa0466290 MtrunA17_Chr7g0218841 29.716 387 238 9 5 387 81 437 2.53e-47 167
Msa0466290 MtrunA17_Chr3g0118731 91.358 81 7 0 2 82 55 135 2.71e-47 159
Msa0466290 MtrunA17_Chr6g0462571 30.769 364 210 10 38 386 121 457 2.81e-47 168
Msa0466290 MtrunA17_Chr8g0336691 34.074 270 146 5 137 386 1118 1375 5.73e-47 172
Msa0466290 MtrunA17_Chr8g0336691 30.195 308 181 6 99 386 176 469 4.29e-43 161
Msa0466290 MtrunA17_Chr8g0336691 34.661 251 128 6 137 379 679 901 1.84e-42 159
Msa0466290 MtrunA17_Chr3g0121991 30.769 390 240 11 19 390 168 545 6.02e-47 168
Msa0466290 MtrunA17_Chr1g0153451 33.861 316 171 9 101 394 171 470 6.30e-47 167
Msa0466290 MtrunA17_Chr8g0336741 36.822 258 133 6 139 378 214 459 2.75e-46 165
Msa0466290 MtrunA17_Chr3g0122001 30.585 376 239 8 29 390 585 952 4.56e-46 169
Msa0466290 MtrunA17_Chr3g0122001 30.971 381 232 10 29 390 105 473 1.73e-44 165
Msa0466290 MtrunA17_Chr8g0336651 33.962 265 141 5 137 379 980 1232 9.47e-46 169
Msa0466290 MtrunA17_Chr8g0336651 34.211 266 145 6 139 386 207 460 5.31e-43 160
Msa0466290 MtrunA17_Chr8g0336651 31.395 258 137 5 137 386 545 770 9.58e-36 139
Msa0466290 MtrunA17_Chr8g0339461 31.217 378 215 11 29 383 109 464 1.83e-45 163
Msa0466290 MtrunA17_Chr6g0462521 31.475 305 174 7 102 388 161 448 4.14e-45 161
Msa0466290 MtrunA17_Chr8g0335141 36.059 269 142 8 139 390 213 468 5.83e-45 161
Msa0466290 MtrunA17_Chr8g0377941 28.989 376 229 9 29 391 112 462 6.51e-45 161
Msa0466290 MtrunA17_Chr7g0232401 27.792 385 235 10 14 379 96 456 7.95e-45 161
Msa0466290 MtrunA17_Chr6g0449931 34.967 306 156 8 114 390 176 467 1.23e-44 160
Msa0466290 MtrunA17_Chr8g0339451 30.628 382 220 10 21 379 93 452 1.33e-44 160
Msa0466290 MtrunA17_Chr8g0336731 35.955 267 141 7 139 387 233 487 1.70e-44 160
Msa0466290 MtrunA17_Chr4g0072771 27.701 361 231 7 30 388 131 463 2.09e-44 160
Msa0466290 MtrunA17_Chr8g0335161 33.007 306 172 9 106 394 179 468 2.26e-44 160
Msa0466290 MtrunA17_Chr7g0232411 30.769 299 176 7 109 389 179 464 2.87e-44 159
Msa0466290 MtrunA17_Chr8g0339601 32.468 308 172 9 94 378 24 318 2.91e-44 156
Msa0466290 MtrunA17_Chr6g0462541 30.105 382 223 8 21 386 106 459 3.17e-44 159
Msa0466290 MtrunA17_Chr6g0486251 32.967 273 149 7 134 386 202 460 4.64e-44 159
Msa0466290 MtrunA17_Chr6g0486201 32.967 273 149 7 134 386 202 460 4.64e-44 159
Msa0466290 MtrunA17_Chr7g0232391 31.773 299 173 8 109 389 179 464 8.71e-44 158
Msa0466290 MtrunA17_Chr7g0232331 30.233 301 178 8 109 390 179 466 1.08e-43 158
Msa0466290 MtrunA17_Chr8g0380531 27.390 387 245 11 14 390 97 457 1.18e-43 157
Msa0466290 MtrunA17_Chr7g0232311 31.818 308 175 6 99 387 169 460 1.18e-43 158
Msa0466290 MtrunA17_Chr6g0462551 32.119 302 176 7 99 386 174 460 1.47e-43 158
Msa0466290 MtrunA17_Chr5g0431401 29.231 390 228 12 12 390 96 448 1.61e-43 157
Msa0466290 MtrunA17_Chr5g0393591 29.231 390 217 9 9 390 97 435 2.44e-43 157
Msa0466290 MtrunA17_Chr8g0366391 30.827 399 242 12 13 396 107 486 5.09e-43 156
Msa0466290 MtrunA17_Chr7g0265141 34.050 279 156 6 135 391 214 486 7.00e-43 156
Msa0466290 MtrunA17_Chr7g0249931 27.461 386 242 10 17 392 128 485 1.17e-42 155
Msa0466290 MtrunA17_Chr1g0153461 37.615 218 117 4 196 394 2 219 1.49e-42 148
Msa0466290 MtrunA17_Chr8g0334851 32.039 309 168 9 99 383 172 462 1.51e-42 155
Msa0466290 MtrunA17_Chr5g0431441 29.337 392 235 10 13 392 106 467 1.81e-42 154
Msa0466290 MtrunA17_Chr4g0072761 26.944 360 235 6 30 388 118 450 1.86e-42 154
Msa0466290 MtrunA17_Chr6g0462531 29.745 353 207 10 42 379 127 453 3.58e-42 154
Msa0466290 MtrunA17_Chr6g0459311 32.075 265 149 7 139 386 217 467 4.99e-42 154
Msa0466290 MtrunA17_Chr8g0374931 30.052 386 226 10 29 390 116 481 5.66e-42 154
Msa0466290 MtrunA17_Chr8g0347281 33.221 298 167 7 99 379 179 461 7.72e-42 153
Msa0466290 MtrunA17_Chr7g0232341 32.472 271 153 7 139 390 207 466 9.66e-42 152
Msa0466290 MtrunA17_Chr7g0265041 33.096 281 164 6 135 395 217 493 1.14e-41 153
Msa0466290 MtrunA17_Chr3g0079731 31.849 292 155 7 126 388 202 478 1.23e-41 152
Msa0466290 MtrunA17_Chr5g0442581 31.546 317 172 8 108 396 183 482 1.29e-41 153
Msa0466290 MtrunA17_Chr4g0014061 35.179 307 162 12 105 390 182 472 1.34e-41 152
Msa0466290 MtrunA17_Chr8g0334861 30.744 309 184 8 99 389 166 462 2.14e-41 152
Msa0466290 MtrunA17_Chr7g0275681 33.333 279 157 7 135 393 214 483 2.71e-41 152
Msa0466290 MtrunA17_Chr6g0454111 43.558 163 89 2 79 240 23 183 2.76e-41 144
Msa0466290 MtrunA17_Chr5g0431361 28.571 392 232 11 12 390 97 453 3.08e-41 151
Msa0466290 MtrunA17_Chr5g0448521 33.333 285 151 8 136 393 198 470 4.22e-41 151
Msa0466290 MtrunA17_Chr7g0275511 35.185 270 143 8 137 386 214 471 5.05e-41 151
Msa0466290 MtrunA17_Chr5g0419761 29.082 392 234 12 29 395 118 490 7.69e-41 150
Msa0466290 MtrunA17_Chr8g0347271 32.740 281 159 6 116 379 195 462 9.53e-41 150
Msa0466290 MtrunA17_Chr7g0243931 30.670 388 216 12 32 390 127 490 9.95e-41 150
Msa0466290 MtrunA17_Chr5g0431371 29.231 390 228 12 12 390 96 448 1.80e-40 149
Msa0466290 MtrunA17_Chr7g0243631 30.628 382 224 13 32 390 123 486 2.29e-40 149
Msa0466290 MtrunA17_Chr2g0294921 31.186 388 219 12 29 390 265 630 3.17e-40 151
Msa0466290 MtrunA17_Chr5g0431421 28.608 395 226 12 12 391 96 449 6.08e-40 147
Msa0466290 MtrunA17_Chr4g0060511 36.101 277 151 8 135 390 216 487 9.11e-40 148
Msa0466290 MtrunA17_Chr5g0419771 32.014 278 165 6 135 392 241 514 1.66e-39 147
Msa0466290 MtrunA17_Chr8g0374901 34.643 280 153 7 136 390 204 478 1.70e-39 147
Msa0466290 MtrunA17_Chr5g0442601 32.177 317 168 8 105 393 581 878 1.91e-39 150
Msa0466290 MtrunA17_Chr5g0442601 34.444 180 97 2 163 331 164 333 5.27e-28 116
Msa0466290 MtrunA17_Chr8g0374941 34.164 281 153 8 136 390 1143 1417 1.98e-39 150
Msa0466290 MtrunA17_Chr8g0374941 33.333 261 146 7 136 372 670 926 2.91e-33 132
Msa0466290 MtrunA17_Chr8g0374941 32.331 266 146 9 136 374 205 463 5.88e-33 131
Msa0466290 MtrunA17_Chr5g0440421 29.104 402 247 14 12 392 111 495 2.53e-39 146
Msa0466290 MtrunA17_Chr5g0432731 31.068 309 188 8 93 392 6 298 3.51e-39 142
Msa0466290 MtrunA17_Chr7g0243681 29.024 379 229 11 32 390 121 479 4.79e-39 145
Msa0466290 MtrunA17_Chr4g0044501 29.073 399 246 12 13 396 108 484 5.42e-39 145
Msa0466290 MtrunA17_Chr7g0243871 32.738 336 170 12 84 390 164 472 6.00e-39 145
Msa0466290 MtrunA17_Chr7g0243801 36.462 277 144 10 136 390 210 476 6.12e-39 145
Msa0466290 MtrunA17_Chr7g0243771 36.170 282 138 10 136 390 209 475 1.04e-38 145
Msa0466290 MtrunA17_Chr8g0374971 33.569 283 160 7 132 390 202 480 1.08e-38 145
Msa0466290 MtrunA17_Chr1g0173121 35.266 207 121 4 197 390 256 462 1.24e-38 144
Msa0466290 MtrunA17_Chr1g0159551 31.481 270 160 6 125 379 189 448 1.36e-38 144
Msa0466290 MtrunA17_Chr2g0294931 32.986 288 166 7 126 390 198 481 1.46e-38 144
Msa0466290 MtrunA17_Chr8g0339441 37.198 207 111 4 197 384 217 423 3.23e-38 142
Msa0466290 MtrunA17_Chr1g0179901 32.734 278 162 9 136 392 222 495 3.91e-38 143
Msa0466290 MtrunA17_Chr7g0243951 29.639 388 219 12 32 390 121 483 5.56e-38 143
Msa0466290 MtrunA17_Chr8g0350881 34.164 281 153 7 136 390 206 480 6.91e-38 142
Msa0466290 MtrunA17_Chr4g0066221 33.216 283 161 7 132 390 202 480 8.71e-38 142
Msa0466290 MtrunA17_Chr5g0442521 31.615 291 156 6 126 387 196 472 1.25e-37 142
Msa0466290 MtrunA17_Chr3g0106231 28.571 392 233 12 12 391 96 452 1.36e-37 141
Msa0466290 MtrunA17_Chr5g0428081 33.333 279 159 7 135 390 205 479 1.41e-37 142
Msa0466290 MtrunA17_Chr5g0442541 32.500 320 173 9 94 387 160 462 1.69e-37 141
Msa0466290 MtrunA17_Chr4g0066201 33.688 282 157 8 134 392 202 476 2.65e-37 141
Msa0466290 MtrunA17_Chr7g0265101 28.941 387 239 12 29 394 119 490 3.04e-37 141
Msa0466290 MtrunA17_Chr7g0243781 31.250 320 181 8 99 390 167 475 3.90e-37 140
Msa0466290 MtrunA17_Chr7g0235051 32.219 329 186 10 91 389 131 452 4.46e-37 140
Msa0466290 MtrunA17_Chr5g0442511 30.662 287 162 7 126 387 216 490 4.84e-37 140
Msa0466290 MtrunA17_Chr4g0066281 30.878 353 204 12 67 390 125 466 6.09e-37 140
Msa0466290 MtrunA17_Chr7g0243851 33.226 310 173 10 110 390 138 442 6.35e-37 139
Msa0466290 MtrunA17_Chr8g0361371 29.674 337 188 12 79 387 152 467 8.88e-37 139
Msa0466290 MtrunA17_Chr7g0265151 25.945 397 235 12 31 395 119 488 1.39e-36 139
Msa0466290 MtrunA17_Chr5g0442561 29.114 316 179 9 105 393 178 475 2.07e-36 138
Msa0466290 MtrunA17_Chr5g0403641 31.034 290 153 9 139 395 235 510 2.84e-36 138
Msa0466290 MtrunA17_Chr4g0066151 31.507 292 172 7 123 390 192 479 1.75e-35 136
Msa0466290 MtrunA17_Chr7g0243861 32.534 292 171 8 120 390 201 487 2.28e-35 135
Msa0466290 MtrunA17_Chr5g0442491 30.405 296 163 5 126 393 197 477 2.43e-35 135
Msa0466290 MtrunA17_Chr4g0066261 31.541 279 164 7 135 390 207 481 2.57e-35 135
Msa0466290 MtrunA17_Chr4g0044521 32.222 270 161 8 137 388 199 464 2.91e-35 135
Msa0466290 MtrunA17_Chr7g0265051 31.769 277 162 7 139 394 218 488 4.69e-35 135
Msa0466290 MtrunA17_Chr8g0370941 27.358 318 181 7 114 388 176 486 5.68e-35 135
Msa0466290 MtrunA17_Chr7g0243711 36.916 214 117 6 194 390 104 316 5.96e-35 131
Msa0466290 MtrunA17_Chr4g0066131 31.142 289 159 7 132 390 196 474 7.14e-35 134
Msa0466290 MtrunA17_Chr3g0106251 30.519 308 178 9 96 391 11 294 7.20e-35 130
Msa0466290 MtrunA17_Chr6g0463861 32.028 281 161 8 135 390 198 473 1.57e-34 133
Msa0466290 MtrunA17_Chr2g0294941 28.022 364 220 10 32 372 17 361 4.20e-34 130
Msa0466290 MtrunA17_Chr6g0463851 31.173 324 188 10 93 390 168 482 5.06e-34 132
Msa0466290 MtrunA17_Chr7g0218311 30.822 292 174 8 122 390 197 483 5.11e-34 132
Msa0466290 MtrunA17_Chr5g0448551 25.373 335 221 8 30 358 107 418 6.84e-34 131
Msa0466290 MtrunA17_Chr5g0429711 31.365 271 156 7 137 394 212 465 8.23e-34 131
Msa0466290 MtrunA17_Chr8g0334831 30.503 318 164 13 79 360 151 447 1.00e-33 131
Msa0466290 MtrunA17_Chr4g0011051 26.440 382 250 8 29 391 119 488 1.24e-33 131
Msa0466290 MtrunA17_Chr5g0401851 27.481 393 220 13 33 390 121 483 1.31e-33 130
Msa0466290 MtrunA17_Chr7g0243761 33.704 270 135 9 136 390 214 454 3.31e-33 129
Msa0466290 MtrunA17_Chr3g0079711 37.500 184 96 4 224 388 3 186 3.40e-33 122
Msa0466290 MtrunA17_Chr5g0429681 32.000 275 154 8 137 394 245 503 9.94e-33 128
Msa0466290 MtrunA17_Chr5g0410941 27.979 386 234 12 29 390 124 489 1.20e-32 128
Msa0466290 MtrunA17_Chr2g0302961 31.159 276 152 8 137 390 206 465 1.81e-32 127
Msa0466290 MtrunA17_Chr7g0265111 35.545 211 119 4 198 391 306 516 3.10e-32 127
Msa0466290 MtrunA17_Chr5g0420801 26.316 380 233 13 27 390 110 458 9.37e-32 125
Msa0466290 MtrunA17_Chr8g0336271 40.000 155 93 0 2 156 90 244 1.15e-31 121
Msa0466290 MtrunA17_Chr2g0302991 28.523 298 185 6 110 390 176 462 2.04e-31 124
Msa0466290 MtrunA17_Chr8g0355221 31.136 273 167 7 136 390 217 486 2.26e-31 124
Msa0466290 MtrunA17_Chr7g0243911 35.468 203 103 6 194 379 18 209 5.32e-31 118
Msa0466290 MtrunA17_Chr5g0416741 26.133 375 247 10 32 390 123 483 2.13e-30 122
Msa0466290 MtrunA17_Chr6g0463891 27.368 380 245 10 28 390 119 484 4.02e-30 121
Msa0466290 MtrunA17_Chr4g0066171 30.108 279 167 7 134 390 204 476 4.62e-30 120
Msa0466290 MtrunA17_Chr4g0042891 29.693 293 160 9 127 389 188 464 5.83e-30 120
Msa0466290 MtrunA17_Chr1g0207881 42.149 121 64 1 265 379 253 373 6.75e-30 119
Msa0466290 MtrunA17_Chr1g0165701 26.842 380 235 11 33 390 125 483 1.19e-29 120
Msa0466290 MtrunA17_Chr8g0382021 31.658 199 120 4 197 379 279 477 2.89e-29 118
Msa0466290 MtrunA17_Chr4g0044481 33.663 202 126 4 135 334 205 400 3.28e-29 117
Msa0466290 MtrunA17_Chr7g0243611 37.952 166 86 4 194 343 132 296 1.04e-28 114
Msa0466290 MtrunA17_Chr2g0329111 25.907 386 235 12 14 376 102 459 1.32e-28 116
Msa0466290 MtrunA17_Chr8g0369341 27.922 308 187 10 99 390 180 468 1.71e-28 116
Msa0466290 MtrunA17_Chr7g0243811 30.859 256 154 7 94 337 137 381 1.33e-27 112
Msa0466290 MtrunA17_Chr4g0042931 27.365 296 183 9 111 389 182 462 4.65e-27 112
Msa0466290 MtrunA17_Chr2g0307961 30.038 263 166 8 136 391 218 469 8.70e-27 111
Msa0466290 MtrunA17_Chr5g0416821 27.346 373 241 10 28 390 121 473 8.87e-27 111
Msa0466290 MtrunA17_Chr8g0361411 28.958 259 170 7 139 390 202 453 1.65e-26 110
Msa0466290 MtrunA17_Chr5g0427561 55.952 84 37 0 308 391 2 85 1.67e-26 101
Msa0466290 MtrunA17_Chr4g0029131 29.134 254 150 6 132 371 203 440 8.44e-26 109
Msa0466290 MtrunA17_Chr8g0337381 45.455 121 60 2 270 386 3 121 1.53e-25 100
Msa0466290 MtrunA17_Chr1g0196851 29.644 253 150 8 132 371 243 480 4.04e-25 106
Msa0466290 MtrunA17_Chr2g0278721 31.939 263 153 9 141 395 734 978 4.48e-25 107
Msa0466290 MtrunA17_Chr2g0278721 28.992 238 145 8 140 367 220 443 1.34e-18 88.2
Msa0466290 MtrunA17_Chr5g0431431 31.250 256 152 8 93 346 110 343 8.99e-25 104
Msa0466290 MtrunA17_Chr6g0454391 65.625 64 22 0 283 346 11 74 8.42e-24 95.5
Msa0466290 MtrunA17_Chr5g0409591 28.049 246 146 8 139 357 212 453 1.05e-23 102
Msa0466290 MtrunA17_Chr7g0232351 30.357 224 128 7 99 308 169 378 5.30e-23 99.4
Msa0466290 MtrunA17_Chr7g0241801 31.892 185 107 6 192 367 232 406 1.07e-22 99.4
Msa0466290 MtrunA17_Chr7g0241781 31.746 189 110 6 192 371 232 410 1.12e-22 99.4
Msa0466290 MtrunA17_Chr5g0427571 30.435 230 150 6 137 359 42 268 2.51e-22 96.3
Msa0466290 MtrunA17_Chr3g0092031 32.544 169 104 4 200 362 6 170 4.05e-22 93.2
Msa0466290 MtrunA17_Chr4g0069611 29.787 235 145 7 141 367 216 438 5.54e-22 97.4
Msa0466290 MtrunA17_Chr6g0482061 27.703 296 184 8 99 378 186 467 6.96e-22 97.4
Msa0466290 MtrunA17_Chr7g0231631 28.346 254 173 6 141 390 11 259 1.94e-21 93.2
Msa0466290 MtrunA17_Chr8g0336251 30.769 234 150 6 137 364 212 439 3.94e-21 94.7
Msa0466290 MtrunA17_Chr8g0336321 30.769 234 150 6 137 364 212 439 4.13e-21 94.7
Msa0466290 MtrunA17_Chr8g0357361 28.390 236 145 7 114 333 24 251 4.18e-21 92.0
Msa0466290 MtrunA17_Chr2g0302851 30.833 240 138 8 140 367 216 439 7.12e-21 94.0
Msa0466290 MtrunA17_Chr4g0040691 26.038 265 172 8 136 391 209 458 9.62e-21 93.6
Msa0466290 MtrunA17_Chr4g0029151 26.459 257 153 6 132 371 211 448 1.17e-20 93.6
Msa0466290 MtrunA17_Chr4g0066141 36.306 157 83 4 251 390 195 351 1.50e-20 92.0
Msa0466290 MtrunA17_Chr2g0283041 29.213 178 118 3 198 367 256 433 2.06e-20 92.8
Msa0466290 MtrunA17_Chr4g0039881 29.787 235 145 7 141 367 193 415 3.72e-20 91.7
Msa0466290 MtrunA17_Chr6g0454381 32.576 132 89 0 41 172 3 134 4.30e-20 85.9
Msa0466290 MtrunA17_Chr6g0464091 29.339 242 153 8 97 333 181 409 3.33e-19 89.4
Msa0466290 MtrunA17_Chr8g0367221 29.609 179 110 4 199 366 1547 1720 3.40e-19 90.1
Msa0466290 MtrunA17_Chr8g0367221 32.558 172 104 5 199 361 1057 1225 7.29e-19 89.4
Msa0466290 MtrunA17_Chr8g0367221 32.692 156 92 5 192 341 261 409 1.90e-18 87.8
Msa0466290 MtrunA17_Chr4g0040711 26.923 234 150 5 136 361 209 429 7.35e-19 88.2
Msa0466290 MtrunA17_Chr6g0466831 27.341 267 163 10 141 394 219 467 7.64e-19 88.2
Msa0466290 MtrunA17_Chr6g0466841 25.191 262 175 8 141 394 219 467 5.63e-18 85.5
Msa0466290 MtrunA17_Chr2g0278741 29.832 238 141 9 141 367 303 525 7.40e-18 85.5
Msa0466290 MtrunA17_Chr2g0319761 28.856 201 133 5 200 391 259 458 1.77e-16 80.9
Msa0466290 MtrunA17_Chr2g0319791 30.058 173 112 4 198 361 257 429 2.66e-16 80.5
Msa0466290 MtrunA17_Chr5g0426411 43.210 81 46 0 2 82 92 172 2.91e-16 76.3
Msa0466290 MtrunA17_Chr6g0454281 37.143 105 63 1 2 103 91 195 1.75e-15 75.1
Msa0466290 MtrunA17_Chr7g0243731 47.059 68 35 1 267 333 6 73 4.54e-15 70.1
Msa0466290 MtrunA17_Chr2g0319731 29.240 171 112 4 200 361 276 446 1.62e-14 75.1
Msa0466290 MtrunA17_Chr4g0029161 24.506 253 135 6 132 371 203 412 3.44e-14 73.9
Msa0466290 MtrunA17_Chr2g0319751 26.829 205 140 5 198 393 734 937 3.55e-14 74.3
Msa0466290 MtrunA17_Chr2g0319751 26.471 204 116 6 198 392 257 435 2.83e-12 68.6
Msa0466290 MtrunA17_Chr2g0319801 28.655 171 113 4 200 361 259 429 6.50e-14 73.2
Msa0466290 MtrunA17_Chr2g0321331 28.395 162 91 5 208 361 94 238 3.65e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466290 AT1G22380.1 47.315 391 204 2 2 391 92 481 4.96e-138 403
Msa0466290 AT1G22340.1 45.178 394 215 1 2 394 92 485 6.02e-135 395
Msa0466290 AT1G22360.1 45.524 391 211 2 2 391 89 478 6.88e-135 395
Msa0466290 AT1G22400.1 46.173 392 208 3 2 391 92 482 2.94e-134 394
Msa0466290 AT1G22370.2 47.315 391 199 3 2 391 92 476 1.69e-131 386
Msa0466290 AT1G22360.2 43.990 391 205 3 2 391 89 466 5.77e-127 374
Msa0466290 AT1G78270.1 43.367 392 218 4 2 391 92 481 2.34e-117 350
Msa0466290 AT1G22370.1 48.684 304 154 2 89 391 4 306 5.79e-104 310
Msa0466290 AT5G59590.1 32.727 385 232 8 10 390 88 449 3.91e-66 217
Msa0466290 AT5G38040.1 33.679 386 227 9 10 390 88 449 5.22e-65 214
Msa0466290 AT3G11340.1 33.854 384 229 7 10 391 85 445 1.81e-64 213
Msa0466290 AT5G59580.1 33.162 389 232 9 10 394 87 451 5.93e-64 211
Msa0466290 AT2G36970.1 30.978 368 229 6 29 390 122 470 7.50e-64 212
Msa0466290 AT3G46690.1 35.567 388 221 8 8 390 86 449 1.04e-63 211
Msa0466290 AT3G46680.1 33.795 361 214 8 30 387 108 446 7.47e-63 209
Msa0466290 AT3G46660.1 34.097 393 224 10 8 390 91 458 1.09e-61 206
Msa0466290 AT3G46700.1 33.609 363 219 6 30 390 102 444 3.58e-61 204
Msa0466290 AT3G46650.1 33.162 389 211 8 8 392 87 430 6.97e-61 203
Msa0466290 AT3G46670.1 31.888 392 232 10 8 393 85 447 1.86e-60 202
Msa0466290 AT5G38010.1 32.821 390 233 8 8 390 86 453 2.08e-60 202
Msa0466290 AT3G55710.1 33.687 377 214 13 30 395 108 459 4.45e-60 202
Msa0466290 AT4G15480.1 31.818 374 222 10 29 390 126 478 6.93e-60 202
Msa0466290 AT5G05880.1 30.280 393 245 8 1 387 76 445 9.18e-60 201
Msa0466290 AT4G15500.1 30.458 371 232 7 29 391 111 463 1.55e-59 201
Msa0466290 AT5G05890.1 31.026 390 236 8 8 387 83 449 3.01e-58 197
Msa0466290 AT3G21560.1 31.267 371 227 9 29 390 121 472 1.60e-57 196
Msa0466290 AT3G55700.1 31.351 370 226 9 30 395 110 455 3.41e-56 191
Msa0466290 AT5G05870.1 30.334 389 244 8 10 390 85 454 3.97e-56 191
Msa0466290 AT1G05680.1 37.276 279 157 5 109 379 173 441 6.77e-55 188
Msa0466290 AT4G15490.1 30.000 400 247 9 4 391 89 467 8.09e-55 188
Msa0466290 AT3G46720.1 33.243 367 207 8 30 390 106 440 8.48e-55 187
Msa0466290 AT2G28080.1 31.771 384 238 7 11 391 110 472 1.09e-54 188
Msa0466290 AT2G26480.1 31.781 365 227 8 30 391 101 446 8.05e-54 185
Msa0466290 AT1G05675.1 34.843 287 169 5 109 387 173 449 8.06e-54 185
Msa0466290 AT5G05860.1 31.266 387 240 7 9 391 84 448 1.39e-52 181
Msa0466290 AT5G05900.1 28.212 397 247 8 1 387 76 444 2.55e-52 181
Msa0466290 AT5G17050.1 28.297 364 238 6 30 392 117 458 2.82e-51 178
Msa0466290 AT2G31750.1 32.566 304 185 6 99 392 163 456 4.82e-50 175
Msa0466290 AT2G31750.2 32.566 304 185 6 99 392 163 456 1.13e-49 175
Msa0466290 AT5G17040.2 30.945 307 195 4 87 391 47 338 2.11e-49 170
Msa0466290 AT5G17040.1 28.571 364 229 6 30 391 106 440 6.64e-49 172
Msa0466290 AT2G43820.1 28.649 370 229 9 29 390 104 446 2.21e-48 170
Msa0466290 AT1G30530.1 28.375 363 235 6 30 391 113 451 3.11e-48 170
Msa0466290 AT2G31790.1 30.084 359 227 7 29 379 103 445 3.33e-48 170
Msa0466290 AT4G01070.1 36.260 262 136 5 137 379 207 456 4.79e-48 170
Msa0466290 AT2G43840.2 29.032 372 225 10 29 390 104 446 1.03e-47 169
Msa0466290 AT2G43840.1 29.032 372 225 10 29 390 104 446 1.58e-47 168
Msa0466290 AT2G30140.2 29.950 404 236 12 2 394 87 454 7.12e-45 161
Msa0466290 AT2G30140.1 29.703 404 238 12 2 394 87 455 9.01e-45 161
Msa0466290 AT2G15490.3 34.848 264 158 4 137 390 218 477 1.15e-44 161
Msa0466290 AT4G34131.1 33.113 302 178 7 107 390 184 479 2.22e-44 160
Msa0466290 AT2G30150.1 29.397 398 240 8 2 390 71 436 3.07e-44 159
Msa0466290 AT2G30150.2 29.899 398 238 10 2 390 87 452 3.77e-44 159
Msa0466290 AT5G17030.1 28.146 302 202 4 92 392 170 457 8.26e-44 158
Msa0466290 AT2G15490.1 34.457 267 158 5 137 390 218 480 1.45e-43 158
Msa0466290 AT2G15480.1 33.712 264 161 4 137 390 221 480 3.61e-43 157
Msa0466290 AT2G36800.1 30.326 399 240 13 13 392 110 489 4.27e-43 157
Msa0466290 AT3G53160.1 29.091 385 234 8 31 394 120 486 8.84e-43 156
Msa0466290 AT1G05560.1 27.865 384 229 10 29 396 106 457 8.86e-43 156
Msa0466290 AT1G05560.2 28.571 378 222 11 29 390 156 501 1.81e-42 156
Msa0466290 AT2G23250.1 28.302 371 226 14 32 390 93 435 1.85e-42 154
Msa0466290 AT2G36750.1 31.414 382 223 11 32 392 122 485 9.49e-42 153
Msa0466290 AT2G15480.2 32.847 274 160 5 137 390 221 490 1.51e-41 153
Msa0466290 AT5G26310.1 30.233 344 183 13 80 389 146 466 1.74e-41 152
Msa0466290 AT4G15550.1 31.000 300 175 6 105 389 190 472 5.52e-41 151
Msa0466290 AT2G36780.1 34.672 274 157 6 137 392 221 490 6.32e-41 151
Msa0466290 AT2G36770.1 33.818 275 160 6 137 393 221 491 7.14e-41 151
Msa0466290 AT1G05530.1 27.154 383 226 10 29 391 106 455 7.46e-41 150
Msa0466290 AT3G16520.3 31.776 321 192 10 79 388 153 457 1.05e-40 150
Msa0466290 AT2G36760.1 33.091 275 162 6 137 393 221 491 1.12e-40 150
Msa0466290 AT5G66690.1 29.290 338 194 9 80 389 146 466 1.69e-40 150
Msa0466290 AT4G14090.1 33.220 295 171 9 105 389 176 454 4.09e-40 148
Msa0466290 AT1G24100.1 28.267 375 234 11 29 390 106 458 4.33e-40 148
Msa0466290 AT1G01420.1 33.735 249 135 6 137 367 207 443 7.75e-40 148
Msa0466290 AT1G01420.2 33.735 249 135 6 137 367 210 446 7.87e-40 148
Msa0466290 AT4G36770.1 38.265 196 104 4 197 375 253 448 1.34e-39 147
Msa0466290 AT5G14860.1 33.566 286 160 8 118 390 207 475 1.80e-39 147
Msa0466290 AT2G23260.1 29.492 295 189 8 105 390 169 453 2.34e-39 146
Msa0466290 AT3G02100.1 28.261 368 226 11 30 388 122 460 3.99e-39 146
Msa0466290 AT2G36790.1 35.036 274 156 6 137 392 220 489 8.21e-39 145
Msa0466290 AT3G16520.2 33.460 263 155 7 79 334 153 402 1.24e-38 144
Msa0466290 AT3G16520.1 33.460 263 155 7 79 334 153 402 1.65e-38 144
Msa0466290 AT4G34135.1 31.683 303 182 6 107 390 185 481 2.97e-38 144
Msa0466290 AT3G50740.1 29.448 326 178 9 99 392 170 475 5.99e-38 143
Msa0466290 AT1G01390.1 32.526 289 160 8 116 383 186 460 3.73e-37 140
Msa0466290 AT1G01390.2 32.526 289 160 8 116 383 203 477 3.75e-37 141
Msa0466290 AT2G18570.1 30.921 304 159 10 118 388 179 464 6.89e-37 140
Msa0466290 AT5G37950.1 32.639 288 158 8 30 308 83 343 1.04e-36 137
Msa0466290 AT2G18560.1 32.237 304 155 12 118 388 89 374 2.23e-36 137
Msa0466290 AT5G37950.2 32.270 282 161 6 30 308 83 337 3.54e-36 135
Msa0466290 AT4G34138.1 30.795 302 184 6 107 390 184 478 6.70e-36 137
Msa0466290 AT2G16890.2 32.117 274 151 9 132 390 214 467 4.02e-35 135
Msa0466290 AT1G10400.1 34.201 269 148 10 136 393 215 465 5.80e-35 134
Msa0466290 AT3G21790.1 31.636 275 153 7 139 390 216 478 7.48e-35 134
Msa0466290 AT3G22250.1 27.247 356 220 9 30 363 103 441 1.37e-34 133
Msa0466290 AT2G29730.1 29.832 238 148 4 161 391 238 463 3.34e-34 132
Msa0466290 AT2G29710.1 25.843 356 233 9 45 391 130 463 4.56e-34 132
Msa0466290 AT3G21800.1 30.961 281 158 7 139 395 212 480 1.41e-33 131
Msa0466290 AT4G15260.1 28.669 293 172 6 126 395 81 359 5.98e-33 127
Msa0466290 AT1G07240.1 26.923 364 224 11 48 391 135 476 6.77e-33 129
Msa0466290 AT1G07250.1 30.451 266 163 5 137 391 219 473 1.70e-32 128
Msa0466290 AT3G21780.1 29.795 292 171 8 126 395 194 473 3.23e-32 127
Msa0466290 AT3G53150.1 26.667 405 235 11 28 393 131 512 5.48e-32 127
Msa0466290 AT4G15280.1 29.617 287 161 9 133 393 205 476 1.10e-31 125
Msa0466290 AT4G15280.2 29.617 287 161 9 133 393 237 508 1.54e-31 125
Msa0466290 AT3G21760.1 27.885 312 185 9 103 390 185 480 4.84e-31 124
Msa0466290 AT1G07260.1 28.464 267 168 5 137 391 217 472 5.01e-31 124
Msa0466290 AT2G29740.1 29.688 256 155 7 137 380 222 464 1.01e-30 123
Msa0466290 AT3G21750.1 25.962 312 188 6 108 393 177 471 4.64e-29 118
Msa0466290 AT5G03490.1 30.620 258 152 8 141 390 224 462 9.46e-29 117
Msa0466290 AT2G29750.1 26.776 366 228 12 45 396 140 479 2.57e-28 116
Msa0466290 AT1G73880.1 25.939 293 199 6 106 391 186 467 2.13e-26 110
Msa0466290 AT2G16890.3 30.303 231 127 8 132 348 214 424 4.34e-25 106
Msa0466290 AT1G51210.1 26.741 359 218 11 14 364 110 431 5.43e-25 106
Msa0466290 AT5G65550.1 32.222 180 104 4 199 368 269 440 1.34e-23 102
Msa0466290 AT5G54010.1 27.037 270 171 9 132 393 198 449 7.95e-23 100
Msa0466290 AT5G12890.1 32.850 207 117 8 192 379 267 470 3.88e-22 98.6
Msa0466290 AT5G49690.1 32.353 170 101 4 199 362 266 427 4.52e-22 98.2
Msa0466290 AT4G27560.1 28.358 201 136 4 198 391 248 447 7.71e-21 94.4
Msa0466290 AT1G64910.1 29.130 230 141 7 140 361 197 412 1.29e-20 93.6
Msa0466290 AT4G27570.1 29.944 177 117 3 198 367 248 424 1.89e-20 93.2
Msa0466290 AT5G53990.1 29.902 204 123 6 140 341 197 382 8.77e-20 91.3
Msa0466290 AT5G54060.1 28.295 258 160 7 124 372 207 448 3.02e-19 89.7
Msa0466290 AT1G06000.1 25.180 278 187 7 126 390 164 433 1.00e-18 87.8
Msa0466290 AT3G29630.1 26.971 241 155 6 105 343 165 386 1.44e-18 87.4
Msa0466290 AT4G09500.2 26.316 209 138 6 172 367 213 418 8.82e-18 85.1
Msa0466290 AT4G09500.1 27.429 175 120 3 200 367 219 393 9.68e-18 84.7
Msa0466290 AT2G22590.1 32.000 175 111 4 199 366 273 446 3.63e-17 83.6
Msa0466290 AT3G29630.2 31.724 145 94 2 200 343 220 360 6.98e-17 82.4
Msa0466290 AT1G64920.1 23.746 299 196 9 106 389 166 447 1.00e-16 82.0
Msa0466290 AT2G22930.1 26.857 175 121 3 200 367 244 418 1.20e-16 81.6
Msa0466290 AT1G50580.1 31.469 143 93 2 200 341 245 383 7.02e-15 76.3
Msa0466290 AT4G34135.2 30.822 146 89 3 107 244 185 326 1.36e-13 71.6
Msa0466290 AT4G01070.2 29.655 145 76 3 137 267 207 339 4.76e-12 67.0

Find 86 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 3_3:+66881541 Msa0466290:CDS
TTATGCAACACTTGGAAAAT+AGG 0.198741 3_3:+66881918 Msa0466290:CDS
CTATGGACAGCTTCTACTTA+TGG 0.232171 3_3:+66879837 Msa0466290:CDS
TCTTCACCCATTACTATATC+TGG 0.244649 3_3:-66881684 None:intergenic
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_3:-66879636 None:intergenic
TGGAAGAGTGGGTAAGGATT+TGG 0.285735 3_3:+66879797 Msa0466290:CDS
ATAAAAGACACCTTCATAAA+AGG 0.304167 3_3:+66879549 Msa0466290:five_prime_UTR
ATGACTCAGAATGCATAAAA+TGG 0.312996 3_3:+66881529 Msa0466290:CDS
AAAATGATGGAAGGAGAAAA+AGG 0.327546 3_3:+66881993 Msa0466290:CDS
CAGGTCTGCCTACTATTTGT+TGG 0.330319 3_3:+66881859 Msa0466290:CDS
TATGCAACACTTGGAAAATA+GGG 0.331166 3_3:+66881919 Msa0466290:CDS
ACACTTGAAGCAATTTCTTC+AGG 0.336883 3_3:+66881840 Msa0466290:CDS
TATGGACAGCTTCTACTTAT+GGG 0.341056 3_3:+66879838 Msa0466290:CDS
GGGCCAATGCTATATATGTT+AGG 0.343893 3_3:-66881432 None:intergenic
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_3:+66881892 Msa0466290:CDS
CTAGATGAGGTTAAGGATAG+AGG 0.357626 3_3:+66881732 Msa0466290:CDS
AGCTTCTACTTATGGGTTTG+TGG 0.359062 3_3:+66879845 Msa0466290:CDS
AAAACATTTGAAGAATTAGA+AGG 0.359348 3_3:+66881378 Msa0466290:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_3:+66879777 Msa0466290:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.364508 3_3:-66879600 None:intergenic
TCAGTACTATATATTAATTA+TGG 0.370543 3_3:+66881573 Msa0466290:CDS
GGAAGAGTGGGTAAGGATTT+GGG 0.371053 3_3:+66879798 Msa0466290:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_3:-66879756 None:intergenic
ATCACTTGAAAGAATTTGCT+TGG 0.385257 3_3:+66881619 Msa0466290:CDS
TCACTTGAAAGAATTTGCTT+GGG 0.404835 3_3:+66881620 Msa0466290:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 3_3:+66881223 Msa0466290:CDS
GTGAAGCCCTTGACACCCTT+AGG 0.405921 3_3:+66881400 Msa0466290:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 3_3:+66881231 Msa0466290:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 3_3:-66881815 None:intergenic
CGGTTTAATTTACCTTTGAA+TGG 0.412883 3_3:-66879909 None:intergenic
CATAAAATGGTTGAGTAAAT+GGG 0.417737 3_3:+66881542 Msa0466290:CDS
GCTTCTACTTATGGGTTTGT+GGG 0.422381 3_3:+66879846 Msa0466290:CDS
CAATGTTGTGTGATTCAACT+AGG 0.436379 3_3:+66879670 Msa0466290:exon
CTTGCTCATCCATCAGTTGG+AGG 0.436717 3_3:+66881789 Msa0466290:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 3_3:+66881946 Msa0466290:CDS
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_3:-66879624 None:intergenic
CTGATGGATGAGCAAGAACT+TGG 0.444290 3_3:-66881782 None:intergenic
AATTAACTATGATGTGAAAA+GGG 0.466340 3_3:+66881947 Msa0466290:CDS
ATGAGGCCAGATATAGTAAT+GGG 0.468666 3_3:+66881678 Msa0466290:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_3:-66881882 None:intergenic
AAGAAAGGCCAACAAATAGT+AGG 0.487158 3_3:-66881867 None:intergenic
GGCCAATGCTATATATGTTA+GGG 0.499318 3_3:-66881431 None:intergenic
ATACAAGTAACTGGAATATG+AGG 0.502466 3_3:-66879747 None:intergenic
AGAGATGAGACAAAATTGCT+TGG 0.504567 3_3:+66882019 Msa0466290:CDS
CTTTGCTGGAAGAGTGGGTA+AGG 0.504779 3_3:+66879791 Msa0466290:CDS
ACAAAATTGCGTGAGATCAT+CGG 0.504897 3_3:+66881344 Msa0466290:CDS
TTGCTCATCCATCAGTTGGA+GGG 0.515334 3_3:+66881790 Msa0466290:CDS
CCAATCTAAACTTGTATCCA+AGG 0.516376 3_3:-66881223 None:intergenic
TGAAGCCCTTGACACCCTTA+GGG 0.516862 3_3:+66881401 Msa0466290:CDS
GTTCTTGCTCATCCATCAGT+TGG 0.519428 3_3:+66881786 Msa0466290:CDS
ATTGGCCCACTTCACATGCT+TGG 0.521488 3_3:+66881447 Msa0466290:CDS
CTAGTTGAATCACACAACAT+TGG 0.524951 3_3:-66879669 None:intergenic
TATGACTTTGCTGGAAGAGT+GGG 0.525317 3_3:+66879786 Msa0466290:CDS
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_3:+66879897 Msa0466290:CDS
TGTGGGATATTTGCAATTCG+AGG 0.531454 3_3:+66879863 Msa0466290:CDS
GCATTCGAGAGATACAACTA+TGG 0.532990 3_3:+66879820 Msa0466290:CDS
TCAGTGATTCTAATGAAGCT+TGG 0.535128 3_3:-66881282 None:intergenic
GGTTCCTAACTCATTGTGGT+TGG 0.541326 3_3:+66881811 Msa0466290:CDS
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_3:-66879619 None:intergenic
TTTAGCCCTAAGGGTGTCAA+GGG 0.544009 3_3:-66881406 None:intergenic
ATAGAGGATACATAACTAGT+TGG 0.545228 3_3:+66881748 Msa0466290:CDS
GCCTACCAAGCATGTGAAGT+GGG 0.545551 3_3:-66881452 None:intergenic
TGATTCTAATGAAGCTTGGA+AGG 0.547294 3_3:-66881278 None:intergenic
CAAACTTGTTGTGAAAATGA+TGG 0.548226 3_3:+66881980 Msa0466290:CDS
AGCTACAGATGCTACTAATG+TGG 0.548442 3_3:+66882055 Msa0466290:CDS
CACTTGAAAGAATTTGCTTG+GGG 0.550965 3_3:+66881621 Msa0466290:CDS
AGCCCTAACATATATAGCAT+TGG 0.552169 3_3:+66881429 Msa0466290:CDS
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_3:+66879759 Msa0466290:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 3_3:+66881910 Msa0466290:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 3_3:-66881798 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 3_3:+66881807 Msa0466290:CDS
TGAGACAAAATTGCTTGGAG+TGG 0.568580 3_3:+66882024 Msa0466290:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.571412 3_3:+66879785 Msa0466290:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_3:+66879609 Msa0466290:five_prime_UTR
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 3_3:-66881214 None:intergenic
CAACACTTGGAAAATAGGGA+TGG 0.580082 3_3:+66881923 Msa0466290:CDS
GCTACAGATGCTACTAATGT+GGG 0.582080 3_3:+66882056 Msa0466290:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 3_3:+66881677 Msa0466290:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 3_3:+66881451 Msa0466290:CDS
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_3:-66879708 None:intergenic
TTAATATATAGTACTGAGCA+AGG 0.597770 3_3:-66881567 None:intergenic
TGCCTACCAAGCATGTGAAG+TGG 0.610099 3_3:-66881453 None:intergenic
ACCTCATCTAGAAAATCTTG+TGG 0.633955 3_3:-66881720 None:intergenic
CTTGTTGTGAAAATGATGGA+AGG 0.645189 3_3:+66881984 Msa0466290:CDS
TTCGAGGAGCTTGTCAACAG+AGG 0.649301 3_3:+66879879 Msa0466290:CDS
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_3:+66882059 Msa0466290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATATCAGTT+GGG - chr3_3:66880665-66880684 None:intergenic 10.0%
!! TAAAAAAAAAAAATATCAGT+TGG - chr3_3:66880666-66880685 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG - chr3_3:66880799-66880818 None:intergenic 10.0%
!! ATTAAAATCAATATAAACAA+AGG - chr3_3:66880977-66880996 None:intergenic 10.0%
!! TATATAATGTATCTAAAAAG+TGG - chr3_3:66880056-66880075 None:intergenic 15.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG + chr3_3:66880223-66880242 Msa0466290:intron 15.0%
!! TTATACATTCATAATATTCA+TGG + chr3_3:66880256-66880275 Msa0466290:intron 15.0%
!!! TTTATTTTTTTTTACAAGAG+AGG + chr3_3:66880633-66880652 Msa0466290:intron 15.0%
!!! TTATTTTTTTTTACAAGAGA+GGG + chr3_3:66880634-66880653 Msa0466290:intron 15.0%
!! TCAGTACTATATATTAATTA+TGG + chr3_3:66881573-66881592 Msa0466290:CDS 15.0%
!! TTAATGCGATATGAATATTT+AGG + chr3_3:66880766-66880785 Msa0466290:intron 20.0%
!!! TTTTTTCTATGAGCTAATTA+AGG - chr3_3:66880823-66880842 None:intergenic 20.0%
!! AAATGTACATAACAGAAATT+AGG - chr3_3:66880923-66880942 None:intergenic 20.0%
!! AAAACATTTGAAGAATTAGA+AGG + chr3_3:66881378-66881397 Msa0466290:CDS 20.0%
!! AAATTAACTATGATGTGAAA+AGG + chr3_3:66881946-66881965 Msa0466290:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG + chr3_3:66881947-66881966 Msa0466290:CDS 20.0%
! ATAAAAGACACCTTCATAAA+AGG + chr3_3:66879549-66879568 Msa0466290:five_prime_UTR 25.0%
! TGAAACATAGAGAAAAAGAT+CGG - chr3_3:66879932-66879951 None:intergenic 25.0%
!! TAGATTTTACAAAACTACGA+TGG - chr3_3:66879962-66879981 None:intergenic 25.0%
! ATTTGACGCATTTAATACAA+GGG - chr3_3:66880318-66880337 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG - chr3_3:66880319-66880338 None:intergenic 25.0%
!! TTAAATGCGTCAAATTTTGA+CGG + chr3_3:66880323-66880342 Msa0466290:intron 25.0%
!! TTTAGAATTAGAGTTAGTCA+AGG - chr3_3:66880463-66880482 None:intergenic 25.0%
!!! ATTAGTTTAGCTACTTTTCT+TGG - chr3_3:66880486-66880505 None:intergenic 25.0%
!!! ACTATTTTTGGAACTTGATA+TGG + chr3_3:66880853-66880872 Msa0466290:intron 25.0%
!! CATTTTCATGAGAAAGAAAA+CGG + chr3_3:66881474-66881493 Msa0466290:CDS 25.0%
! CATAAAATGGTTGAGTAAAT+GGG + chr3_3:66881542-66881561 Msa0466290:CDS 25.0%
!! TTAATATATAGTACTGAGCA+AGG - chr3_3:66881570-66881589 None:intergenic 25.0%
!!! ATAGTAAGTTACCGTTTTTA+TGG + chr3_3:66881652-66881671 Msa0466290:CDS 25.0%
ATGGTCTCAAATTGAAAATC+AGG - chr3_3:66879603-66879622 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG - chr3_3:66879750-66879769 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG - chr3_3:66879759-66879778 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG + chr3_3:66879759-66879778 Msa0466290:CDS 30.0%
! CGGTTTAATTTACCTTTGAA+TGG - chr3_3:66879912-66879931 None:intergenic 30.0%
TTAACGATTAGAATATGCCT+CGG - chr3_3:66880585-66880604 None:intergenic 30.0%
ATGACTCAGAATGCATAAAA+TGG + chr3_3:66881529-66881548 Msa0466290:CDS 30.0%
GCATAAAATGGTTGAGTAAA+TGG + chr3_3:66881541-66881560 Msa0466290:CDS 30.0%
! ATCACTTGAAAGAATTTGCT+TGG + chr3_3:66881619-66881638 Msa0466290:CDS 30.0%
! TCACTTGAAAGAATTTGCTT+GGG + chr3_3:66881620-66881639 Msa0466290:CDS 30.0%
!! TACCGTTTTTATGGATAATG+AGG + chr3_3:66881661-66881680 Msa0466290:CDS 30.0%
! AGATTTTCTAGATGAGGTTA+AGG + chr3_3:66881725-66881744 Msa0466290:CDS 30.0%
ATAGAGGATACATAACTAGT+TGG + chr3_3:66881748-66881767 Msa0466290:CDS 30.0%
TTATGCAACACTTGGAAAAT+AGG + chr3_3:66881918-66881937 Msa0466290:CDS 30.0%
TATGCAACACTTGGAAAATA+GGG + chr3_3:66881919-66881938 Msa0466290:CDS 30.0%
! CATCATTTTCACAACAAGTT+TGG - chr3_3:66881982-66882001 None:intergenic 30.0%
!! CAAACTTGTTGTGAAAATGA+TGG + chr3_3:66881980-66881999 Msa0466290:CDS 30.0%
! AAAATGATGGAAGGAGAAAA+AGG + chr3_3:66881993-66882012 Msa0466290:CDS 30.0%
GTTGCATCTTTATCTGATTC+TGG - chr3_3:66879639-66879658 None:intergenic 35.0%
CTAGTTGAATCACACAACAT+TGG - chr3_3:66879672-66879691 None:intergenic 35.0%
CAATGTTGTGTGATTCAACT+AGG + chr3_3:66879670-66879689 Msa0466290:exon 35.0%
TTAATCACGAGCTCTTTGAA+AGG - chr3_3:66879711-66879730 None:intergenic 35.0%
TATGGACAGCTTCTACTTAT+GGG + chr3_3:66879838-66879857 Msa0466290:CDS 35.0%
AGAGGAATTCTTCCATTCAA+AGG + chr3_3:66879897-66879916 Msa0466290:CDS 35.0%
! ACTACATTTTTGTTGGTCCT+TGG - chr3_3:66880385-66880404 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG + chr3_3:66880384-66880403 Msa0466290:intron 35.0%
AGGACCAACAAAAATGTAGT+GGG + chr3_3:66880385-66880404 Msa0466290:intron 35.0%
ATGTTAGCAAACTTCTCCAT+CGG + chr3_3:66880504-66880523 Msa0466290:intron 35.0%
TAACGTTATGATTCATCCGA+TGG - chr3_3:66880523-66880542 None:intergenic 35.0%
!!! GGTGCTAATGTCATTTTCAT+TGG - chr3_3:66880564-66880583 None:intergenic 35.0%
! GATGAAAATTTTGTTGCCGA+TGG + chr3_3:66881198-66881217 Msa0466290:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG - chr3_3:66881226-66881245 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG + chr3_3:66881223-66881242 Msa0466290:CDS 35.0%
ACAAGTTTAGATTGGATCTC+TGG + chr3_3:66881231-66881250 Msa0466290:CDS 35.0%
TGATTCTAATGAAGCTTGGA+AGG - chr3_3:66881281-66881300 None:intergenic 35.0%
TCAGTGATTCTAATGAAGCT+TGG - chr3_3:66881285-66881304 None:intergenic 35.0%
ACAAAATTGCGTGAGATCAT+CGG + chr3_3:66881344-66881363 Msa0466290:CDS 35.0%
AGCCCTAACATATATAGCAT+TGG + chr3_3:66881429-66881448 Msa0466290:CDS 35.0%
GGCCAATGCTATATATGTTA+GGG - chr3_3:66881434-66881453 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG + chr3_3:66881621-66881640 Msa0466290:CDS 35.0%
GGCCTCATTATCCATAAAAA+CGG - chr3_3:66881666-66881685 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG + chr3_3:66881677-66881696 Msa0466290:CDS 35.0%
ATGAGGCCAGATATAGTAAT+GGG + chr3_3:66881678-66881697 Msa0466290:CDS 35.0%
TCTTCACCCATTACTATATC+TGG - chr3_3:66881687-66881706 None:intergenic 35.0%
ACCTCATCTAGAAAATCTTG+TGG - chr3_3:66881723-66881742 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG - chr3_3:66881818-66881837 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG + chr3_3:66881840-66881859 Msa0466290:CDS 35.0%
AAGAAAGGCCAACAAATAGT+AGG - chr3_3:66881870-66881889 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG + chr3_3:66881892-66881911 Msa0466290:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66881910-66881929 Msa0466290:CDS 35.0%
! CTTGTTGTGAAAATGATGGA+AGG + chr3_3:66881984-66882003 Msa0466290:CDS 35.0%
AGAGATGAGACAAAATTGCT+TGG + chr3_3:66882019-66882038 Msa0466290:CDS 35.0%
! CACACACACACCTTTTATGA+AGG - chr3_3:66879562-66879581 None:intergenic 40.0%
! CAATTTGAGACCATACCTGA+TGG + chr3_3:66879609-66879628 Msa0466290:five_prime_UTR 40.0%
TTCTGGTAAACCATCAGGTA+TGG - chr3_3:66879622-66879641 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG - chr3_3:66879627-66879646 None:intergenic 40.0%
GATGGCAATTATGACTTTGC+TGG + chr3_3:66879777-66879796 Msa0466290:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG + chr3_3:66879785-66879804 Msa0466290:CDS 40.0%
TATGACTTTGCTGGAAGAGT+GGG + chr3_3:66879786-66879805 Msa0466290:CDS 40.0%
GCATTCGAGAGATACAACTA+TGG + chr3_3:66879820-66879839 Msa0466290:CDS 40.0%
CTATGGACAGCTTCTACTTA+TGG + chr3_3:66879837-66879856 Msa0466290:CDS 40.0%
AGCTTCTACTTATGGGTTTG+TGG + chr3_3:66879845-66879864 Msa0466290:CDS 40.0%
GCTTCTACTTATGGGTTTGT+GGG + chr3_3:66879846-66879865 Msa0466290:CDS 40.0%
TGTGGGATATTTGCAATTCG+AGG + chr3_3:66879863-66879882 Msa0466290:CDS 40.0%
TTCATGGTCATTGAGTCACA+TGG + chr3_3:66880272-66880291 Msa0466290:intron 40.0%
!! ATTTTGACGGATGCCAATCA+TGG + chr3_3:66880336-66880355 Msa0466290:intron 40.0%
!! CAACAAAAATGTAGTGGGCA+CGG + chr3_3:66880390-66880409 Msa0466290:intron 40.0%
! TTTTCTCTCTCTCTCTCTGA+TGG - chr3_3:66880425-66880444 None:intergenic 40.0%
TGAAAATGACATTAGCACCG+AGG + chr3_3:66880565-66880584 Msa0466290:intron 40.0%
ATGCGATATGTGCACTGTTT+AGG + chr3_3:66880604-66880623 Msa0466290:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG - chr3_3:66880892-66880911 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG - chr3_3:66880896-66880915 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG - chr3_3:66880905-66880924 None:intergenic 40.0%
TCTACAATCGATCATGTGTC+TGG - chr3_3:66881099-66881118 None:intergenic 40.0%
! GATGATCTCACGCAATTTTG+TGG - chr3_3:66881345-66881364 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG - chr3_3:66881435-66881454 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG + chr3_3:66881502-66881521 Msa0466290:CDS 40.0%
! GCCACAAGATTTTCTAGATG+AGG + chr3_3:66881719-66881738 Msa0466290:CDS 40.0%
CTAGATGAGGTTAAGGATAG+AGG + chr3_3:66881732-66881751 Msa0466290:CDS 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG - chr3_3:66881885-66881904 None:intergenic 40.0%
CAACACTTGGAAAATAGGGA+TGG + chr3_3:66881923-66881942 Msa0466290:CDS 40.0%
TGAGACAAAATTGCTTGGAG+TGG + chr3_3:66882024-66882043 Msa0466290:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG + chr3_3:66882055-66882074 Msa0466290:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG + chr3_3:66882056-66882075 Msa0466290:CDS 40.0%
TGGAAGAGTGGGTAAGGATT+TGG + chr3_3:66879797-66879816 Msa0466290:CDS 45.0%
GGAAGAGTGGGTAAGGATTT+GGG + chr3_3:66879798-66879817 Msa0466290:CDS 45.0%
GCAAGTGACAACTGTGTCTA+GGG - chr3_3:66880363-66880382 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG - chr3_3:66880392-66880411 None:intergenic 45.0%
ATTTGCATACACTGTCAGCG+TGG + chr3_3:66880995-66881014 Msa0466290:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG - chr3_3:66881217-66881236 None:intergenic 45.0%
!! TTTAGCCCTAAGGGTGTCAA+GGG - chr3_3:66881409-66881428 None:intergenic 45.0%
!!! TTTTAGCCCTAAGGGTGTCA+AGG - chr3_3:66881410-66881429 None:intergenic 45.0%
! GTTAGGGCTTTTAGCCCTAA+GGG - chr3_3:66881418-66881437 None:intergenic 45.0%
! TGTTAGGGCTTTTAGCCCTA+AGG - chr3_3:66881419-66881438 None:intergenic 45.0%
! GAAAACGGTTTTGCAGCAAG+TGG + chr3_3:66881489-66881508 Msa0466290:CDS 45.0%
! CTGATGGATGAGCAAGAACT+TGG - chr3_3:66881785-66881804 None:intergenic 45.0%
GTTCTTGCTCATCCATCAGT+TGG + chr3_3:66881786-66881805 Msa0466290:CDS 45.0%
TTGCTCATCCATCAGTTGGA+GGG + chr3_3:66881790-66881809 Msa0466290:CDS 45.0%
GGTTCCTAACTCATTGTGGT+TGG + chr3_3:66881811-66881830 Msa0466290:CDS 45.0%
CAGGTCTGCCTACTATTTGT+TGG + chr3_3:66881859-66881878 Msa0466290:CDS 45.0%
ACAGATGCTACTAATGTGGG+AGG + chr3_3:66882059-66882078 Msa0466290:CDS 45.0%
!!! AAAAAATATATTACTATTTT+TGG + chr3_3:66880841-66880860 Msa0466290:intron 5.0%
CTTTGCTGGAAGAGTGGGTA+AGG + chr3_3:66879791-66879810 Msa0466290:CDS 50.0%
TTCGAGGAGCTTGTCAACAG+AGG + chr3_3:66879879-66879898 Msa0466290:CDS 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG - chr3_3:66880352-66880371 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG - chr3_3:66880364-66880383 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG + chr3_3:66880365-66880384 Msa0466290:intron 50.0%
! TTTTGTTGCCGATGGCACCT+TGG + chr3_3:66881206-66881225 Msa0466290:CDS 50.0%
TGAAGCCCTTGACACCCTTA+GGG + chr3_3:66881401-66881420 Msa0466290:CDS 50.0%
ATTGGCCCACTTCACATGCT+TGG + chr3_3:66881447-66881466 Msa0466290:CDS 50.0%
GCCTACCAAGCATGTGAAGT+GGG - chr3_3:66881455-66881474 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG - chr3_3:66881456-66881475 None:intergenic 50.0%
CTTGCTCATCCATCAGTTGG+AGG + chr3_3:66881789-66881808 Msa0466290:CDS 50.0%
GTTAGGAACCCTCCAACTGA+TGG - chr3_3:66881801-66881820 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG + chr3_3:66881807-66881826 Msa0466290:CDS 50.0%
GTGAAGCCCTTGACACCCTT+AGG + chr3_3:66881400-66881419 Msa0466290:CDS 55.0%
GCCCACTTCACATGCTTGGT+AGG + chr3_3:66881451-66881470 Msa0466290:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66879521 66882142 66879521 ID=Msa0466290;Name=Msa0466290
chr3_3 mRNA 66879521 66882142 66879521 ID=Msa0466290-mRNA-1;Parent=Msa0466290;Name=Msa0466290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=151|1|0.5|1|1|1|2|0|396
chr3_3 exon 66879521 66879918 66879521 ID=Msa0466290-mRNA-1:exon:15339;Parent=Msa0466290-mRNA-1
chr3_3 exon 66881199 66882142 66881199 ID=Msa0466290-mRNA-1:exon:15340;Parent=Msa0466290-mRNA-1
chr3_3 five_prime_UTR 66879521 66879671 66879521 ID=Msa0466290-mRNA-1:five_prime_utr;Parent=Msa0466290-mRNA-1
chr3_3 CDS 66879672 66879918 66879672 ID=Msa0466290-mRNA-1:cds;Parent=Msa0466290-mRNA-1
chr3_3 CDS 66881199 66882142 66881199 ID=Msa0466290-mRNA-1:cds;Parent=Msa0466290-mRNA-1
Gene Sequence

>Msa0466290

ATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGGTAAGGATTTGGGCATTCGAGAGATACAACTATGGACAGCTTCTACTTATGGGTTTGTGGGATATTTGCAATTCGAGGAGCTTGTCAACAGAGGAATTCTTCCATTCAAAGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATTAGAATCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTGAGCCACAAAATTGCGTGAGATCATCGGCAATCATCATTAAAACATTTGAAGAATTAGAAGGTGAAGCCCTTGACACCCTTAGGGCTAAAAGCCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCATGAGAAAGAAAACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAGTTACCGTTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAGGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAGACCAAGTTCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATAGGGATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACCAAACTTGTTGTGAAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAATTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA
Protein sequence

>Msa0466290

MLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVGKDLGIREIQLWTASTYGFVGYLQFEELVNRGILPFKDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRITDLNDIMFDFFCVEPQNCVRSSAIIIKTFEELEGEALDTLRAKSPNIYSIGPLHMLGRHFHEKENGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTDHHLKEFAWGIANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWKIGMEINYDVKREEITKLVVKMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*