AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466090 MtrunA17_Chr3g0118771 92.555 497 34 1 1 497 1 494 0.0 969
Msa0466090 MtrunA17_Chr3g0118711 81.913 481 87 0 16 496 5 485 0.0 851
Msa0466090 MtrunA17_Chr3g0118691 81.988 483 86 1 16 497 6 488 0.0 850
Msa0466090 MtrunA17_Chr3g0118751 85.115 477 42 2 21 497 3 450 0.0 840
Msa0466090 MtrunA17_Chr3g0118701 80.124 483 95 1 16 497 6 488 0.0 835
Msa0466090 MtrunA17_Chr3g0118671 80.462 476 93 0 21 496 3 478 0.0 830
Msa0466090 MtrunA17_Chr3g0118661 66.042 480 162 1 18 497 7 485 0.0 649
Msa0466090 MtrunA17_Chr5g0426431 55.414 471 204 5 24 492 12 478 0.0 551
Msa0466090 MtrunA17_Chr3g0092641 54.449 472 209 5 23 492 11 478 0.0 542
Msa0466090 MtrunA17_Chr3g0118721 83.729 295 48 0 203 497 1 295 0.0 535
Msa0466090 MtrunA17_Chr3g0078841 50.000 478 235 3 17 492 3 478 2.12e-180 514
Msa0466090 MtrunA17_Chr6g0454341 49.163 478 239 3 17 492 3 478 5.89e-178 508
Msa0466090 MtrunA17_Chr6g0454191 50.000 482 232 5 17 492 3 481 1.45e-177 507
Msa0466090 MtrunA17_Chr2g0278711 50.210 476 229 5 20 492 7 477 1.38e-175 502
Msa0466090 MtrunA17_Chr6g0454331 50.628 478 226 4 22 492 5 479 9.49e-175 500
Msa0466090 MtrunA17_Chr6g0454321 48.643 479 239 4 17 493 3 476 3.60e-173 502
Msa0466090 MtrunA17_Chr6g0454321 45.455 143 69 3 17 150 493 635 3.06e-29 121
Msa0466090 MtrunA17_Chr8g0336331 50.209 478 233 4 17 492 3 477 7.45e-173 495
Msa0466090 MtrunA17_Chr6g0454401 49.687 479 232 4 20 492 6 481 3.97e-172 493
Msa0466090 MtrunA17_Chr6g0453951 49.167 480 236 4 18 492 51 527 5.92e-171 492
Msa0466090 MtrunA17_Chr4g0050341 47.648 489 252 2 7 491 2 490 8.14e-171 490
Msa0466090 MtrunA17_Chr6g0454301 50.000 478 235 3 17 492 256 731 3.21e-170 498
Msa0466090 MtrunA17_Chr6g0454301 54.585 229 101 2 262 490 3 228 2.24e-84 275
Msa0466090 MtrunA17_Chr6g0454201 52.101 476 220 5 22 492 9 481 1.52e-169 487
Msa0466090 MtrunA17_Chr6g0454181 47.193 481 246 4 17 492 3 480 2.70e-168 484
Msa0466090 MtrunA17_Chr6g0454211 50.314 477 229 4 21 492 294 767 1.71e-167 492
Msa0466090 MtrunA17_Chr6g0454211 33.714 350 147 4 142 491 3 267 2.72e-56 200
Msa0466090 MtrunA17_Chr6g0454361 49.580 476 232 4 22 492 9 481 6.79e-167 480
Msa0466090 MtrunA17_Chr6g0453961 47.959 490 246 5 9 492 4 490 1.06e-165 478
Msa0466090 MtrunA17_Chr6g0454291 49.686 477 232 4 21 492 4 477 4.22e-165 475
Msa0466090 MtrunA17_Chr8g0359821 47.182 479 247 3 17 492 3 478 5.49e-164 473
Msa0466090 MtrunA17_Chr6g0454351 47.708 480 226 5 18 492 6 465 5.08e-163 470
Msa0466090 MtrunA17_Chr6g0452771 47.609 481 244 4 17 492 3 480 1.41e-157 456
Msa0466090 MtrunA17_Chr6g0454151 47.107 484 246 5 17 495 3 481 2.49e-156 453
Msa0466090 MtrunA17_Chr6g0454261 46.362 481 250 4 17 492 3 480 3.08e-155 451
Msa0466090 MtrunA17_Chr6g0454141 45.322 481 255 4 17 492 3 480 8.13e-154 447
Msa0466090 MtrunA17_Chr6g0454121 45.833 480 253 4 17 492 3 479 7.31e-153 444
Msa0466090 MtrunA17_Chr6g0454131 45.208 480 256 4 17 492 3 479 5.49e-150 437
Msa0466090 MtrunA17_Chr7g0217881 46.122 477 231 5 21 492 7 462 6.83e-149 434
Msa0466090 MtrunA17_Chr5g0423981 45.702 477 214 7 22 492 8 445 2.11e-144 421
Msa0466090 MtrunA17_Chr6g0454251 46.582 395 203 4 21 410 4 395 5.67e-134 393
Msa0466090 MtrunA17_Chr5g0426401 51.923 312 143 5 184 492 4 311 1.94e-113 337
Msa0466090 MtrunA17_Chr6g0454271 52.069 290 136 2 203 492 1 287 4.41e-106 318
Msa0466090 MtrunA17_Chr8g0355011 39.646 396 189 5 102 492 12 362 1.84e-99 303
Msa0466090 MtrunA17_Chr5g0412131 34.647 482 275 11 23 489 11 467 4.35e-91 286
Msa0466090 MtrunA17_Chr3g0112771 34.534 472 273 10 25 492 13 452 6.14e-90 282
Msa0466090 MtrunA17_Chr6g0454221 54.506 233 104 2 262 494 3 233 1.19e-88 273
Msa0466090 MtrunA17_Chr6g0454171 40.774 336 148 5 161 492 22 310 2.55e-88 273
Msa0466090 MtrunA17_Chr5g0412111 33.058 484 283 11 21 489 2 459 3.09e-86 273
Msa0466090 MtrunA17_Chr5g0412101 33.817 482 280 10 23 489 11 468 2.68e-85 271
Msa0466090 MtrunA17_Chr3g0112761 34.322 472 278 11 24 492 8 450 1.94e-84 268
Msa0466090 MtrunA17_Chr4g0032331 32.645 484 282 12 22 496 6 454 1.29e-76 248
Msa0466090 MtrunA17_Chr5g0414331 32.238 487 273 12 24 495 13 457 1.52e-74 242
Msa0466090 MtrunA17_Chr7g0249981 30.675 489 291 12 20 497 21 472 5.03e-73 239
Msa0466090 MtrunA17_Chr5g0414321 31.837 490 285 13 17 495 4 455 1.00e-72 238
Msa0466090 MtrunA17_Chr6g0464921 30.705 482 295 10 18 491 5 455 5.37e-72 236
Msa0466090 MtrunA17_Chr6g0464881 30.943 488 283 11 20 492 7 455 6.58e-72 235
Msa0466090 MtrunA17_Chr7g0250001 29.412 476 302 8 22 493 4 449 3.82e-71 233
Msa0466090 MtrunA17_Chr8g0336271 46.914 243 126 2 17 257 3 244 3.40e-70 225
Msa0466090 MtrunA17_Chr3g0118731 92.727 110 8 0 76 185 28 137 5.01e-69 218
Msa0466090 MtrunA17_Chr8g0365811 31.526 498 285 16 5 480 483 946 1.70e-68 236
Msa0466090 MtrunA17_Chr8g0365811 29.114 474 284 14 19 466 3 450 3.25e-56 202
Msa0466090 MtrunA17_Chr3g0098111 28.980 490 318 11 20 497 4 475 6.51e-68 225
Msa0466090 MtrunA17_Chr6g0464871 30.898 479 291 11 24 494 23 469 2.57e-67 223
Msa0466090 MtrunA17_Chr7g0218831 31.423 471 279 12 23 488 5 436 1.25e-66 221
Msa0466090 MtrunA17_Chr6g0464841 31.315 479 283 12 24 491 11 454 1.58e-66 221
Msa0466090 MtrunA17_Chr1g0207861 31.042 480 300 12 24 491 8 468 3.14e-66 221
Msa0466090 MtrunA17_Chr7g0218841 31.780 472 277 14 23 488 5 437 7.14e-66 219
Msa0466090 MtrunA17_Chr7g0218811 29.512 471 289 12 23 488 14 446 7.69e-66 219
Msa0466090 MtrunA17_Chr7g0218821 29.916 478 289 13 23 488 4 447 7.80e-66 219
Msa0466090 MtrunA17_Chr1g0207971 29.314 481 298 12 24 494 8 456 5.23e-65 217
Msa0466090 MtrunA17_Chr7g0218791 30.290 482 283 15 23 490 4 446 6.70e-65 216
Msa0466090 MtrunA17_Chr4g0044511 30.938 501 291 14 17 491 33 504 1.13e-64 218
Msa0466090 MtrunA17_Chr1g0161351 29.800 500 313 13 9 491 19 497 1.39e-64 217
Msa0466090 MtrunA17_Chr1g0207981 30.498 482 301 10 24 492 13 473 2.59e-64 216
Msa0466090 MtrunA17_Chr6g0454371 54.651 172 77 1 321 492 1 171 1.28e-63 204
Msa0466090 MtrunA17_Chr6g0464861 30.962 478 287 11 23 491 10 453 2.16e-63 213
Msa0466090 MtrunA17_Chr1g0207951 29.940 501 307 13 3 494 108 573 3.51e-62 219
Msa0466090 MtrunA17_Chr1g0207951 27.907 516 315 15 2 497 636 1114 6.59e-58 207
Msa0466090 MtrunA17_Chr5g0426411 57.317 164 69 1 21 183 9 172 4.17e-62 200
Msa0466090 MtrunA17_Chr6g0454231 43.966 232 128 1 20 249 246 477 6.15e-62 209
Msa0466090 MtrunA17_Chr6g0454231 42.188 256 106 4 238 492 5 219 1.26e-58 201
Msa0466090 MtrunA17_Chr1g0207831 29.376 497 291 14 25 497 9 469 8.91e-61 206
Msa0466090 MtrunA17_Chr8g0377921 28.807 486 299 13 23 488 2 460 7.02e-59 201
Msa0466090 MtrunA17_Chr6g0453981 40.948 232 134 2 142 373 3 231 8.30e-59 194
Msa0466090 MtrunA17_Chr8g0380531 27.883 477 306 13 24 491 10 457 7.50e-58 198
Msa0466090 MtrunA17_Chr3g0121991 29.472 492 306 16 20 491 75 545 1.52e-57 199
Msa0466090 MtrunA17_Chr4g0053321 29.675 492 302 14 20 495 20 483 2.17e-57 198
Msa0466090 MtrunA17_Chr4g0053501 29.630 486 300 15 24 495 11 468 6.44e-57 197
Msa0466090 MtrunA17_Chr5g0401721 28.340 494 304 17 25 495 9 475 1.30e-56 196
Msa0466090 MtrunA17_Chr3g0122001 28.834 489 313 13 20 491 482 952 1.32e-56 202
Msa0466090 MtrunA17_Chr3g0122001 28.455 492 312 13 20 491 2 473 1.07e-54 197
Msa0466090 MtrunA17_Chr5g0393591 29.854 479 265 11 24 491 17 435 2.03e-56 194
Msa0466090 MtrunA17_Chr7g0249931 28.125 480 301 12 24 493 40 485 7.88e-56 194
Msa0466090 MtrunA17_Chr8g0336261 58.394 137 56 1 321 457 1 136 1.10e-55 182
Msa0466090 MtrunA17_Chr6g0453941 48.168 191 96 2 162 351 75 263 1.64e-55 187
Msa0466090 MtrunA17_Chr7g0243931 30.255 509 283 16 22 491 15 490 5.45e-55 192
Msa0466090 MtrunA17_Chr8g0366391 30.297 505 308 16 17 497 2 486 4.55e-54 189
Msa0466090 MtrunA17_Chr7g0275681 30.078 512 293 15 16 494 4 483 1.03e-53 188
Msa0466090 MtrunA17_Chr8g0377941 28.221 489 296 15 25 492 8 462 1.60e-53 187
Msa0466090 MtrunA17_Chr5g0431441 29.339 484 294 15 24 493 18 467 1.64e-53 187
Msa0466090 MtrunA17_Chr1g0207931 36.437 247 146 3 241 480 244 486 2.13e-53 187
Msa0466090 MtrunA17_Chr7g0243681 29.492 512 285 17 18 491 6 479 2.91e-53 187
Msa0466090 MtrunA17_Chr7g0243951 28.968 504 295 14 22 491 9 483 4.17e-53 186
Msa0466090 MtrunA17_Chr7g0265041 29.365 504 306 12 23 496 10 493 5.67e-53 186
Msa0466090 MtrunA17_Chr6g0454281 47.090 189 95 2 21 204 7 195 7.39e-53 177
Msa0466090 MtrunA17_Chr5g0431401 28.247 485 285 16 24 491 10 448 1.84e-52 184
Msa0466090 MtrunA17_Chr7g0243631 30.375 507 281 19 24 491 13 486 1.32e-51 182
Msa0466090 MtrunA17_Chr5g0431361 28.008 482 293 15 24 491 12 453 2.49e-51 181
Msa0466090 MtrunA17_Chr8g0373301 29.257 417 250 9 90 487 72 462 2.97e-51 181
Msa0466090 MtrunA17_Chr5g0431371 29.046 482 285 15 24 491 10 448 2.99e-51 180
Msa0466090 MtrunA17_Chr7g0243771 30.572 507 276 18 24 491 6 475 8.80e-51 180
Msa0466090 MtrunA17_Chr7g0243801 29.741 501 296 15 20 491 3 476 1.18e-50 180
Msa0466090 MtrunA17_Chr4g0072771 26.316 475 311 11 21 489 22 463 6.72e-50 177
Msa0466090 MtrunA17_Chr7g0243861 28.516 512 304 16 14 491 4 487 7.76e-50 178
Msa0466090 MtrunA17_Chr5g0440421 29.045 513 300 19 21 493 7 495 7.91e-50 177
Msa0466090 MtrunA17_Chr8g0336741 29.218 486 283 17 20 479 9 459 9.67e-50 177
Msa0466090 MtrunA17_Chr8g0374931 29.225 503 296 15 21 491 7 481 2.61e-49 176
Msa0466090 MtrunA17_Chr4g0060511 28.770 504 296 15 24 491 11 487 5.69e-49 176
Msa0466090 MtrunA17_Chr6g0462571 31.319 364 208 10 139 487 121 457 8.63e-49 174
Msa0466090 MtrunA17_Chr4g0044501 29.000 500 304 17 24 497 10 484 9.84e-49 174
Msa0466090 MtrunA17_Chr7g0249961 35.000 240 137 5 262 493 33 261 9.90e-49 169
Msa0466090 MtrunA17_Chr6g0449931 29.960 504 279 16 22 491 4 467 1.46e-48 174
Msa0466090 MtrunA17_Chr8g0339631 29.274 427 243 12 77 480 67 457 1.50e-48 174
Msa0466090 MtrunA17_Chr5g0431421 27.721 487 287 15 24 492 10 449 1.55e-48 173
Msa0466090 MtrunA17_Chr5g0448551 26.742 445 290 10 21 459 4 418 1.80e-48 173
Msa0466090 MtrunA17_Chr7g0265141 28.352 522 289 18 18 492 3 486 2.97e-48 173
Msa0466090 MtrunA17_Chr4g0014061 30.200 500 279 18 25 491 10 472 3.85e-48 173
Msa0466090 MtrunA17_Chr1g0153451 28.000 500 297 16 24 495 6 470 8.64e-48 171
Msa0466090 MtrunA17_Chr7g0243871 28.656 506 293 15 18 491 3 472 9.21e-48 172
Msa0466090 MtrunA17_Chr7g0243781 27.573 515 290 16 18 491 3 475 2.35e-47 171
Msa0466090 MtrunA17_Chr2g0294921 30.060 499 288 16 25 491 161 630 2.35e-47 173
Msa0466090 MtrunA17_Chr7g0232401 25.873 487 295 14 24 480 6 456 2.43e-47 170
Msa0466090 MtrunA17_Chr5g0419761 28.291 509 312 15 19 496 4 490 2.84e-47 171
Msa0466090 MtrunA17_Chr8g0336691 28.112 498 283 18 24 487 919 1375 4.04e-47 176
Msa0466090 MtrunA17_Chr8g0336691 25.859 495 298 14 24 487 13 469 1.95e-46 174
Msa0466090 MtrunA17_Chr8g0336691 28.421 475 269 16 24 480 480 901 3.58e-43 164
Msa0466090 MtrunA17_Chr2g0294931 28.715 498 304 13 21 491 8 481 4.41e-47 170
Msa0466090 MtrunA17_Chr7g0232411 27.255 499 291 17 24 490 6 464 9.41e-47 169
Msa0466090 MtrunA17_Chr5g0428081 27.869 488 307 12 27 491 14 479 9.95e-47 169
Msa0466090 MtrunA17_Chr7g0232391 28.175 504 280 20 24 490 6 464 1.32e-46 168
Msa0466090 MtrunA17_Chr4g0072761 25.902 471 309 11 24 489 15 450 3.24e-46 167
Msa0466090 MtrunA17_Chr8g0336651 27.586 493 290 15 24 487 6 460 4.36e-46 172
Msa0466090 MtrunA17_Chr8g0336651 27.721 487 287 15 24 480 781 1232 3.08e-45 170
Msa0466090 MtrunA17_Chr8g0336651 31.008 258 138 5 238 487 545 770 1.98e-35 141
Msa0466090 MtrunA17_Chr8g0336731 30.504 377 221 10 130 488 134 487 1.34e-45 166
Msa0466090 MtrunA17_Chr6g0462521 26.884 491 292 13 22 489 2 448 1.55e-45 165
Msa0466090 MtrunA17_Chr5g0419771 27.146 501 312 13 24 493 36 514 1.75e-45 166
Msa0466090 MtrunA17_Chr8g0335161 27.291 502 304 17 20 495 2 468 1.85e-45 165
Msa0466090 MtrunA17_Chr7g0232331 26.285 506 298 18 20 491 2 466 1.87e-45 165
Msa0466090 MtrunA17_Chr6g0462531 27.347 490 287 15 22 480 2 453 2.07e-45 165
Msa0466090 MtrunA17_Chr7g0275511 28.717 491 291 15 23 487 14 471 2.11e-45 165
Msa0466090 MtrunA17_Chr6g0462541 30.366 382 222 8 122 487 106 459 2.54e-45 165
Msa0466090 MtrunA17_Chr8g0335141 28.571 497 297 18 20 491 5 468 3.03e-45 165
Msa0466090 MtrunA17_Chr6g0486251 25.971 489 301 14 25 487 7 460 3.43e-45 164
Msa0466090 MtrunA17_Chr6g0486201 25.971 489 301 14 25 487 7 460 3.43e-45 164
Msa0466090 MtrunA17_Chr4g0066221 29.209 493 295 14 27 491 14 480 3.57e-45 165
Msa0466090 MtrunA17_Chr7g0265101 28.628 503 317 15 20 495 3 490 4.42e-45 165
Msa0466090 MtrunA17_Chr5g0442561 26.627 507 306 16 21 494 2 475 2.35e-44 162
Msa0466090 MtrunA17_Chr1g0179901 27.559 508 302 19 24 493 16 495 2.58e-44 162
Msa0466090 MtrunA17_Chr8g0339451 29.227 414 234 11 91 480 74 452 2.96e-44 162
Msa0466090 MtrunA17_Chr4g0066281 27.699 491 290 14 27 491 15 466 3.14e-44 162
Msa0466090 MtrunA17_Chr7g0235051 30.435 506 260 23 18 490 6 452 3.35e-44 162
Msa0466090 MtrunA17_Chr1g0159551 26.752 471 285 14 29 480 19 448 3.46e-44 161
Msa0466090 MtrunA17_Chr6g0459311 26.411 496 298 17 21 487 10 467 6.79e-44 161
Msa0466090 MtrunA17_Chr6g0462551 32.781 302 174 7 200 487 174 460 7.77e-44 161
Msa0466090 MtrunA17_Chr3g0106231 26.884 491 281 15 24 492 18 452 1.13e-43 160
Msa0466090 MtrunA17_Chr8g0339461 30.871 379 215 12 130 484 109 464 1.22e-43 160
Msa0466090 MtrunA17_Chr8g0374971 28.429 503 289 15 25 491 13 480 1.35e-43 160
Msa0466090 MtrunA17_Chr7g0232341 26.719 509 292 19 20 491 2 466 2.17e-43 159
Msa0466090 MtrunA17_Chr5g0442521 27.112 509 292 17 21 488 2 472 2.88e-43 159
Msa0466090 MtrunA17_Chr7g0232311 31.494 308 176 6 200 488 169 460 3.97e-43 159
Msa0466090 MtrunA17_Chr4g0066261 27.789 493 303 16 27 491 14 481 5.39e-43 159
Msa0466090 MtrunA17_Chr7g0265151 26.036 507 326 15 19 496 2 488 7.95e-43 158
Msa0466090 MtrunA17_Chr7g0243761 27.572 486 292 14 24 491 11 454 9.05e-43 158
Msa0466090 MtrunA17_Chr5g0442581 26.562 512 310 15 21 497 2 482 9.37e-43 159
Msa0466090 MtrunA17_Chr4g0066201 28.195 493 295 14 25 493 19 476 9.93e-43 158
Msa0466090 MtrunA17_Chr8g0374941 29.084 502 283 20 27 491 952 1417 1.66e-42 162
Msa0466090 MtrunA17_Chr8g0374941 27.778 486 278 19 27 475 14 463 6.88e-37 145
Msa0466090 MtrunA17_Chr8g0374941 28.184 479 281 16 27 473 479 926 4.17e-36 143
Msa0466090 MtrunA17_Chr8g0339601 31.690 284 159 7 219 479 47 318 2.60e-42 153
Msa0466090 MtrunA17_Chr5g0442541 28.150 508 286 20 21 492 2 466 4.35e-42 156
Msa0466090 MtrunA17_Chr5g0401851 26.575 508 295 17 26 491 12 483 4.92e-42 156
Msa0466090 MtrunA17_Chr8g0334851 27.092 502 284 18 22 484 4 462 5.27e-42 156
Msa0466090 MtrunA17_Chr1g0173121 25.251 499 290 14 25 491 15 462 5.68e-42 155
Msa0466090 MtrunA17_Chr5g0442601 26.744 516 304 17 18 494 398 878 1.43e-41 159
Msa0466090 MtrunA17_Chr5g0442601 34.973 183 93 4 264 430 164 336 2.62e-27 116
Msa0466090 MtrunA17_Chr3g0079731 26.494 502 302 15 25 489 7 478 1.88e-41 154
Msa0466090 MtrunA17_Chr5g0416741 25.896 502 322 15 18 491 4 483 2.06e-41 155
Msa0466090 MtrunA17_Chr8g0374901 29.142 501 282 18 27 491 15 478 2.60e-41 154
Msa0466090 MtrunA17_Chr6g0463851 28.400 500 292 17 27 491 14 482 2.65e-41 154
Msa0466090 MtrunA17_Chr8g0361371 27.416 507 286 19 21 488 4 467 3.09e-41 154
Msa0466090 MtrunA17_Chr8g0347281 27.178 482 290 15 23 480 17 461 3.11e-41 154
Msa0466090 MtrunA17_Chr7g0218311 27.364 497 301 15 25 491 17 483 3.80e-41 154
Msa0466090 MtrunA17_Chr4g0044521 27.879 495 303 19 17 489 2 464 3.91e-41 153
Msa0466090 MtrunA17_Chr8g0347271 26.834 477 298 12 23 480 18 462 4.18e-41 153
Msa0466090 MtrunA17_Chr5g0410941 26.572 493 309 12 25 491 24 489 4.52e-41 154
Msa0466090 MtrunA17_Chr5g0448521 26.511 513 294 19 21 494 2 470 5.24e-41 153
Msa0466090 MtrunA17_Chr8g0350881 28.515 505 286 13 25 491 13 480 5.70e-41 153
Msa0466090 MtrunA17_Chr6g0454111 43.558 163 89 2 180 341 23 183 6.16e-41 145
Msa0466090 MtrunA17_Chr4g0066151 27.419 496 296 15 25 491 19 479 6.85e-41 153
Msa0466090 MtrunA17_Chr7g0265051 27.539 512 309 18 20 495 3 488 1.47e-40 152
Msa0466090 MtrunA17_Chr4g0066131 26.786 504 289 15 25 491 14 474 2.17e-40 152
Msa0466090 MtrunA17_Chr1g0153461 37.104 221 114 6 297 495 2 219 2.25e-40 145
Msa0466090 MtrunA17_Chr4g0011051 26.962 497 322 13 22 492 7 488 3.66e-40 151
Msa0466090 MtrunA17_Chr8g0334861 26.113 494 307 15 21 490 3 462 7.57e-40 150
Msa0466090 MtrunA17_Chr7g0265111 26.347 501 314 18 24 492 39 516 1.32e-39 150
Msa0466090 MtrunA17_Chr2g0329111 25.926 486 304 13 20 477 2 459 5.35e-39 148
Msa0466090 MtrunA17_Chr6g0463861 27.767 497 290 18 27 491 14 473 7.18e-39 147
Msa0466090 MtrunA17_Chr5g0442511 26.337 505 281 16 18 488 43 490 8.58e-39 147
Msa0466090 MtrunA17_Chr4g0044481 27.907 430 250 12 17 435 20 400 3.27e-38 144
Msa0466090 MtrunA17_Chr5g0442491 25.875 514 303 15 21 494 2 477 3.32e-38 145
Msa0466090 MtrunA17_Chr6g0463891 27.088 491 315 14 25 491 13 484 9.27e-38 144
Msa0466090 MtrunA17_Chr5g0416821 25.941 478 324 12 25 491 15 473 1.80e-37 144
Msa0466090 MtrunA17_Chr5g0432731 29.808 312 188 8 194 493 6 298 3.29e-37 139
Msa0466090 MtrunA17_Chr8g0339441 36.232 207 113 4 298 485 217 423 3.80e-37 142
Msa0466090 MtrunA17_Chr8g0334831 28.000 500 246 23 21 461 3 447 4.52e-37 142
Msa0466090 MtrunA17_Chr8g0370941 24.213 508 314 14 24 489 8 486 1.22e-36 142
Msa0466090 MtrunA17_Chr5g0420801 26.694 487 311 19 20 491 3 458 2.25e-36 140
Msa0466090 MtrunA17_Chr5g0403641 31.034 290 153 9 240 496 235 510 3.04e-36 140
Msa0466090 MtrunA17_Chr7g0243851 32.903 310 174 10 211 491 138 442 7.42e-36 138
Msa0466090 MtrunA17_Chr8g0355221 26.380 489 318 14 26 491 17 486 9.03e-36 139
Msa0466090 MtrunA17_Chr5g0429711 26.572 493 311 16 20 495 7 465 1.31e-35 138
Msa0466090 MtrunA17_Chr7g0241801 28.633 461 256 22 21 468 6 406 3.21e-35 136
Msa0466090 MtrunA17_Chr1g0165701 25.462 487 322 13 26 491 17 483 4.72e-35 137
Msa0466090 MtrunA17_Chr5g0429681 25.376 532 271 19 21 495 41 503 4.91e-35 137
Msa0466090 MtrunA17_Chr2g0294941 28.493 365 217 11 133 473 17 361 2.84e-34 132
Msa0466090 MtrunA17_Chr4g0066171 25.755 497 297 13 25 491 22 476 3.41e-34 134
Msa0466090 MtrunA17_Chr2g0302961 24.506 506 303 15 22 491 3 465 4.02e-34 134
Msa0466090 MtrunA17_Chr7g0243711 35.981 214 119 6 295 491 104 316 1.38e-33 129
Msa0466090 MtrunA17_Chr4g0042891 25.813 492 306 18 24 490 7 464 1.64e-33 132
Msa0466090 MtrunA17_Chr8g0361411 26.283 487 311 18 18 491 2 453 3.33e-33 131
Msa0466090 MtrunA17_Chr3g0118741 86.207 58 8 0 21 78 3 60 7.18e-33 119
Msa0466090 MtrunA17_Chr3g0106251 28.525 305 188 8 197 492 11 294 2.41e-32 125
Msa0466090 MtrunA17_Chr7g0241781 27.778 468 259 22 21 472 6 410 3.37e-32 128
Msa0466090 MtrunA17_Chr1g0196851 24.798 496 276 19 17 472 42 480 3.98e-32 129
Msa0466090 MtrunA17_Chr3g0079711 36.957 184 97 4 325 489 3 186 4.11e-32 121
Msa0466090 MtrunA17_Chr2g0307961 26.747 501 307 20 16 492 5 469 5.35e-32 128
Msa0466090 MtrunA17_Chr4g0042931 26.923 494 296 21 24 490 7 462 5.88e-32 127
Msa0466090 MtrunA17_Chr2g0302991 28.477 302 180 7 211 491 176 462 2.15e-31 126
Msa0466090 MtrunA17_Chr8g0369341 24.449 499 317 16 20 491 3 468 3.97e-31 125
Msa0466090 MtrunA17_Chr8g0336251 27.292 469 278 16 24 465 7 439 1.28e-30 124
Msa0466090 MtrunA17_Chr8g0336321 27.292 469 278 16 24 465 7 439 1.48e-30 124
Msa0466090 MtrunA17_Chr8g0367221 28.017 464 273 20 24 462 798 1225 5.24e-30 124
Msa0466090 MtrunA17_Chr8g0367221 28.604 444 246 21 24 442 12 409 9.26e-28 118
Msa0466090 MtrunA17_Chr8g0367221 26.078 464 292 21 24 467 1288 1720 7.46e-25 108
Msa0466090 MtrunA17_Chr1g0207881 42.149 121 64 1 366 480 253 373 2.27e-29 119
Msa0466090 MtrunA17_Chr7g0243911 32.599 227 115 7 271 480 4 209 2.79e-29 115
Msa0466090 MtrunA17_Chr7g0243811 25.587 426 249 13 36 438 1 381 4.22e-29 118
Msa0466090 MtrunA17_Chr7g0243611 34.071 226 125 8 238 444 76 296 1.58e-28 114
Msa0466090 MtrunA17_Chr8g0382021 31.156 199 121 4 298 480 279 477 2.13e-28 117
Msa0466090 MtrunA17_Chr2g0278721 27.701 509 299 23 17 496 510 978 3.43e-28 119
Msa0466090 MtrunA17_Chr2g0278721 26.068 468 293 17 20 468 10 443 5.80e-28 118
Msa0466090 MtrunA17_Chr4g0029131 23.355 471 297 15 24 472 12 440 4.37e-28 118
Msa0466090 MtrunA17_Chr6g0464091 27.252 433 267 18 17 434 10 409 7.26e-28 116
Msa0466090 MtrunA17_Chr4g0029151 22.993 461 311 12 24 472 20 448 1.44e-27 115
Msa0466090 MtrunA17_Chr2g0302851 26.004 473 287 17 17 468 9 439 2.37e-27 114
Msa0466090 MtrunA17_Chr6g0466831 24.900 498 314 18 17 495 11 467 4.07e-27 114
Msa0466090 MtrunA17_Chr6g0482061 24.000 475 324 12 24 479 11 467 5.79e-26 110
Msa0466090 MtrunA17_Chr5g0427561 54.762 84 38 0 409 492 2 85 6.05e-26 101
Msa0466090 MtrunA17_Chr6g0466841 25.151 497 314 19 17 495 11 467 1.20e-25 109
Msa0466090 MtrunA17_Chr2g0278741 26.737 475 287 18 17 468 89 525 2.51e-25 109
Msa0466090 MtrunA17_Chr8g0337381 43.802 121 62 2 371 487 3 121 1.78e-24 98.6
Msa0466090 MtrunA17_Chr7g0232351 27.163 416 230 18 24 409 6 378 2.75e-24 104
Msa0466090 MtrunA17_Chr5g0409591 28.862 246 144 8 240 458 212 453 5.47e-24 104
Msa0466090 MtrunA17_Chr5g0431431 30.233 258 152 8 194 447 110 343 1.05e-23 102
Msa0466090 MtrunA17_Chr4g0069611 24.313 473 281 16 24 468 15 438 2.07e-23 102
Msa0466090 MtrunA17_Chr4g0040691 23.232 495 310 19 24 492 8 458 3.67e-23 102
Msa0466090 MtrunA17_Chr6g0454381 33.571 140 93 0 142 281 3 142 4.02e-23 95.1
Msa0466090 MtrunA17_Chr6g0454391 64.062 64 23 0 384 447 11 74 1.10e-22 93.2
Msa0466090 MtrunA17_Chr2g0283041 24.249 466 293 20 24 468 7 433 1.48e-21 97.4
Msa0466090 MtrunA17_Chr5g0427571 29.870 231 150 6 238 460 42 268 1.57e-21 95.1
Msa0466090 MtrunA17_Chr8g0357361 29.557 203 133 5 234 434 57 251 3.71e-21 93.2
Msa0466090 MtrunA17_Chr3g0092031 31.361 169 106 4 301 463 6 170 6.30e-21 90.9
Msa0466090 MtrunA17_Chr7g0231631 28.346 254 173 6 242 491 11 259 6.37e-21 92.8
Msa0466090 MtrunA17_Chr7g0250021 25.937 347 211 11 24 361 12 321 3.37e-20 91.7
Msa0466090 MtrunA17_Chr4g0040711 23.934 422 276 14 24 434 8 395 5.02e-20 92.8
Msa0466090 MtrunA17_Chr4g0066141 35.669 157 84 4 352 491 195 351 8.45e-20 90.9
Msa0466090 MtrunA17_Chr4g0039881 29.362 235 146 7 242 468 193 415 1.83e-18 87.8
Msa0466090 MtrunA17_Chr2g0319801 22.538 457 301 13 24 462 8 429 9.62e-18 85.9
Msa0466090 MtrunA17_Chr2g0319791 24.086 465 298 21 14 462 4 429 1.07e-17 85.5
Msa0466090 MtrunA17_Chr2g0319731 23.011 465 289 16 24 462 25 446 2.25e-17 84.7
Msa0466090 MtrunA17_Chr2g0319761 28.502 207 138 5 295 492 253 458 1.32e-16 82.0
Msa0466090 MtrunA17_Chr2g0319751 22.908 502 307 21 24 494 485 937 2.46e-16 82.4
Msa0466090 MtrunA17_Chr2g0319751 22.954 501 282 22 24 493 8 435 1.24e-14 77.0
Msa0466090 MtrunA17_Chr4g0029161 20.851 470 282 15 24 472 12 412 2.57e-16 81.3
Msa0466090 MtrunA17_Chr7g0243731 45.588 68 36 1 368 434 6 73 1.33e-14 68.9
Msa0466090 MtrunA17_Chr1g0207911 25.301 249 169 7 25 269 9 244 3.09e-13 69.7
Msa0466090 MtrunA17_Chr7g0267931 70.270 37 10 1 29 64 25 61 8.14e-12 60.5
Msa0466090 MtrunA17_Chr2g0321331 28.395 162 91 5 309 462 94 238 3.13e-11 63.9
Msa0466090 MtrunA17_Chr7g0243921 32.298 161 75 7 24 165 40 185 4.08e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466090 AT1G22380.1 51.681 476 228 2 18 492 7 481 0.0 537
Msa0466090 AT1G22360.1 49.578 474 237 2 20 492 6 478 0.0 522
Msa0466090 AT1G22340.1 48.536 478 245 1 19 495 8 485 0.0 517
Msa0466090 AT1G22400.1 49.580 476 237 3 19 492 8 482 0.0 516
Msa0466090 AT1G22370.2 50.420 476 229 3 18 492 7 476 9.13e-179 510
Msa0466090 AT1G22360.2 48.101 474 232 3 20 492 6 466 2.17e-174 499
Msa0466090 AT1G78270.1 46.473 482 254 4 18 497 7 486 2.99e-162 469
Msa0466090 AT1G22370.1 49.671 304 151 2 190 492 4 306 1.38e-102 310
Msa0466090 AT3G46660.1 36.688 477 259 13 25 491 15 458 8.88e-85 269
Msa0466090 AT5G59590.1 34.526 475 275 11 21 491 7 449 1.90e-84 268
Msa0466090 AT3G11340.1 33.753 477 280 9 18 492 3 445 5.71e-84 267
Msa0466090 AT5G59580.1 34.874 476 277 10 22 495 7 451 1.20e-83 266
Msa0466090 AT3G46690.1 36.134 476 267 11 21 491 6 449 2.29e-83 265
Msa0466090 AT5G38010.1 34.447 479 278 9 19 491 5 453 3.28e-83 265
Msa0466090 AT2G36970.1 31.557 488 299 9 18 491 4 470 8.91e-83 265
Msa0466090 AT3G46650.1 34.947 475 254 11 22 493 8 430 1.26e-82 263
Msa0466090 AT3G46670.1 34.382 477 269 13 24 494 9 447 4.11e-82 262
Msa0466090 AT3G46680.1 35.095 473 270 12 21 488 6 446 4.33e-82 262
Msa0466090 AT5G38040.1 34.624 465 266 11 32 491 18 449 8.21e-82 261
Msa0466090 AT3G21560.1 31.151 504 294 14 8 491 2 472 4.38e-77 250
Msa0466090 AT5G05880.1 31.635 471 283 11 24 488 8 445 8.09e-77 248
Msa0466090 AT3G46700.1 33.827 473 277 10 21 491 6 444 3.08e-76 246
Msa0466090 AT5G05890.1 32.211 475 279 11 24 488 8 449 4.50e-74 241
Msa0466090 AT4G15500.1 31.417 487 292 12 20 492 5 463 1.27e-73 241
Msa0466090 AT3G46720.1 32.985 479 273 11 19 491 4 440 6.81e-73 238
Msa0466090 AT2G28080.1 32.278 474 289 10 28 492 22 472 1.35e-71 236
Msa0466090 AT3G55710.1 32.383 491 275 16 24 496 8 459 1.58e-71 235
Msa0466090 AT4G15480.1 31.526 498 293 15 12 491 11 478 1.65e-71 236
Msa0466090 AT5G05870.1 31.092 476 291 11 24 491 8 454 5.45e-71 233
Msa0466090 AT5G05900.1 30.105 475 284 11 24 488 8 444 6.19e-71 233
Msa0466090 AT4G15490.1 32.258 496 281 14 20 492 4 467 3.57e-70 232
Msa0466090 AT3G55700.1 30.642 483 290 12 24 496 8 455 1.87e-69 229
Msa0466090 AT2G26480.1 31.368 475 290 11 21 492 5 446 2.28e-67 224
Msa0466090 AT5G05860.1 31.435 474 286 10 24 492 9 448 9.90e-67 222
Msa0466090 AT2G31750.1 30.021 483 295 14 22 493 6 456 2.58e-63 213
Msa0466090 AT2G31750.2 30.021 483 295 14 22 493 6 456 9.38e-63 213
Msa0466090 AT1G05680.1 30.538 465 286 11 24 480 6 441 1.32e-61 208
Msa0466090 AT1G05675.1 28.541 473 301 11 24 488 6 449 2.08e-60 205
Msa0466090 AT2G31790.1 30.169 474 290 12 18 480 2 445 2.31e-60 205
Msa0466090 AT2G43820.1 28.631 482 294 13 21 491 4 446 2.78e-60 205
Msa0466090 AT3G02100.1 28.980 490 296 15 17 489 6 460 3.76e-60 205
Msa0466090 AT2G30140.2 30.739 501 274 17 15 495 7 454 1.12e-57 198
Msa0466090 AT2G30140.1 30.539 501 276 17 15 495 7 455 1.34e-57 198
Msa0466090 AT2G43840.1 27.386 482 298 13 22 491 5 446 2.15e-57 197
Msa0466090 AT2G43840.2 27.386 482 298 13 22 491 5 446 2.28e-57 197
Msa0466090 AT4G34131.1 30.375 507 283 15 21 491 7 479 8.91e-56 194
Msa0466090 AT2G15480.1 29.435 496 305 11 20 491 6 480 2.05e-55 193
Msa0466090 AT2G15490.3 29.175 497 307 11 19 491 2 477 1.19e-54 191
Msa0466090 AT2G36750.1 30.707 495 299 13 24 493 10 485 3.21e-54 190
Msa0466090 AT5G17050.1 25.826 484 324 11 16 493 4 458 4.33e-54 189
Msa0466090 AT2G15480.2 29.051 506 304 12 20 491 6 490 1.05e-53 188
Msa0466090 AT2G15490.1 28.231 503 307 12 19 491 2 480 1.77e-53 187
Msa0466090 AT1G24100.1 29.006 493 284 17 22 491 9 458 7.54e-53 185
Msa0466090 AT1G05560.1 26.939 490 307 13 23 497 4 457 1.03e-52 185
Msa0466090 AT2G30150.2 29.668 482 283 14 24 491 13 452 1.47e-52 184
Msa0466090 AT4G15550.1 27.621 496 296 14 23 490 12 472 1.66e-52 185
Msa0466090 AT2G36800.1 29.563 504 309 17 17 493 5 489 2.07e-52 185
Msa0466090 AT1G05560.2 26.939 490 307 13 23 497 54 507 2.75e-52 185
Msa0466090 AT4G01070.1 28.400 500 272 14 20 480 4 456 1.03e-51 183
Msa0466090 AT4G14090.1 30.081 492 283 18 17 490 6 454 5.09e-51 180
Msa0466090 AT2G30150.1 29.498 478 281 14 28 491 1 436 7.39e-51 179
Msa0466090 AT1G05530.1 26.369 493 301 14 22 492 3 455 1.05e-50 179
Msa0466090 AT2G36770.1 28.911 505 314 14 17 494 5 491 1.62e-50 180
Msa0466090 AT5G17040.1 26.042 480 300 11 24 492 5 440 2.72e-50 178
Msa0466090 AT4G34135.1 29.297 512 291 13 17 491 4 481 1.31e-49 177
Msa0466090 AT2G36780.1 29.400 500 300 16 24 493 14 490 1.52e-49 177
Msa0466090 AT1G30530.1 25.257 487 322 12 10 492 3 451 3.16e-49 175
Msa0466090 AT5G37950.1 33.158 380 208 11 39 409 1 343 3.26e-49 172
Msa0466090 AT3G53160.1 28.400 500 309 16 24 495 8 486 1.03e-48 175
Msa0466090 AT5G17040.2 31.596 307 193 4 188 492 47 338 1.77e-48 170
Msa0466090 AT2G23250.1 28.302 477 288 18 27 491 1 435 1.95e-48 173
Msa0466090 AT5G37950.2 32.620 374 212 9 39 409 1 337 2.73e-48 170
Msa0466090 AT5G26310.1 28.516 512 279 19 19 490 2 466 1.25e-47 172
Msa0466090 AT3G22250.1 27.872 470 282 15 20 464 4 441 1.51e-47 171
Msa0466090 AT2G23260.1 26.337 486 312 14 17 491 3 453 1.90e-47 171
Msa0466090 AT5G66690.1 27.613 507 290 17 19 490 2 466 6.51e-47 170
Msa0466090 AT2G36760.1 28.000 500 309 16 24 494 14 491 2.03e-46 169
Msa0466090 AT1G10400.1 30.600 500 283 21 21 494 4 465 1.11e-45 166
Msa0466090 AT2G36790.1 29.817 493 307 14 24 493 13 489 2.27e-45 166
Msa0466090 AT1G01420.2 27.824 478 278 15 23 471 10 449 5.09e-44 162
Msa0466090 AT1G01420.1 27.824 478 278 15 23 471 7 446 6.49e-44 162
Msa0466090 AT4G34138.1 26.430 507 299 13 22 491 9 478 9.80e-44 161
Msa0466090 AT5G17030.1 28.477 302 201 3 193 493 170 457 2.46e-43 159
Msa0466090 AT4G36770.1 27.859 481 283 17 24 476 4 448 2.54e-43 159
Msa0466090 AT1G01390.1 28.427 496 297 15 18 488 2 464 5.24e-42 156
Msa0466090 AT1G01390.2 28.862 492 292 15 18 484 19 477 6.82e-42 156
Msa0466090 AT2G16890.2 27.953 508 277 23 24 491 9 467 1.44e-41 155
Msa0466090 AT3G53150.1 25.676 518 323 12 18 494 16 512 1.53e-41 155
Msa0466090 AT3G50740.1 27.586 522 277 20 22 493 5 475 1.92e-41 155
Msa0466090 AT5G14860.1 33.566 286 160 7 219 491 207 475 6.19e-41 154
Msa0466090 AT2G29710.1 25.462 487 323 15 21 492 2 463 3.17e-40 151
Msa0466090 AT2G18570.1 26.471 510 285 18 22 489 3 464 8.62e-40 150
Msa0466090 AT3G16520.3 31.776 321 192 10 180 489 153 457 2.26e-39 149
Msa0466090 AT5G03490.1 28.902 519 275 23 7 490 2 461 7.25e-39 147
Msa0466090 AT3G16520.2 32.509 283 167 8 180 451 153 422 3.63e-37 142
Msa0466090 AT3G16520.1 31.949 313 184 10 180 477 153 451 3.78e-37 142
Msa0466090 AT2G29730.1 23.602 483 331 14 24 492 5 463 4.38e-37 142
Msa0466090 AT3G21790.1 26.535 505 308 17 22 491 2 478 3.99e-36 140
Msa0466090 AT1G51210.1 27.729 458 277 13 20 465 16 431 6.69e-36 139
Msa0466090 AT2G18560.1 30.592 304 160 10 219 489 89 374 9.89e-36 137
Msa0466090 AT5G65550.1 27.079 469 286 16 22 469 7 440 5.62e-35 136
Msa0466090 AT1G73880.1 25.255 491 322 14 17 492 7 467 3.44e-34 134
Msa0466090 AT3G21780.1 25.889 506 310 19 22 496 2 473 1.21e-33 133
Msa0466090 AT3G21760.1 24.554 505 320 16 22 491 2 480 8.38e-33 130
Msa0466090 AT1G07250.1 24.254 503 326 16 21 496 3 477 1.28e-32 130
Msa0466090 AT1G07240.1 29.889 271 162 7 238 492 218 476 1.40e-32 130
Msa0466090 AT3G21800.1 32.028 281 155 8 240 496 212 480 1.80e-32 130
Msa0466090 AT3G21750.1 23.031 508 318 14 22 494 2 471 2.01e-32 129
Msa0466090 AT4G15260.1 28.179 291 176 5 227 496 81 359 4.68e-32 126
Msa0466090 AT5G49690.1 26.957 460 274 20 24 463 10 427 2.64e-31 126
Msa0466090 AT4G15280.1 23.483 511 317 14 22 494 2 476 3.17e-31 126
Msa0466090 AT2G29740.1 30.078 256 154 7 238 481 222 464 3.18e-31 126
Msa0466090 AT1G07260.1 29.104 268 165 6 238 492 217 472 3.38e-31 126
Msa0466090 AT4G15280.2 23.256 516 322 14 17 494 29 508 4.61e-31 126
Msa0466090 AT2G16890.3 26.304 460 251 22 24 444 9 419 2.16e-30 123
Msa0466090 AT5G12890.1 26.423 492 296 20 24 480 10 470 2.47e-29 120
Msa0466090 AT2G29750.1 23.930 514 309 18 24 497 8 479 3.15e-29 120
Msa0466090 AT5G54010.1 24.597 496 301 21 22 494 4 449 1.52e-26 112
Msa0466090 AT4G27560.1 23.732 493 304 17 22 492 5 447 2.04e-25 109
Msa0466090 AT4G27570.1 23.820 466 290 15 22 468 5 424 3.42e-25 108
Msa0466090 AT2G22590.1 26.261 476 289 18 17 467 8 446 3.68e-25 108
Msa0466090 AT5G53990.1 25.858 437 252 16 21 442 3 382 6.73e-24 104
Msa0466090 AT4G34135.2 27.606 355 199 10 17 345 4 326 9.01e-24 102
Msa0466090 AT1G64910.1 25.000 464 272 18 21 462 3 412 5.84e-23 101
Msa0466090 AT3G29630.1 24.766 428 272 15 22 444 4 386 1.16e-22 100
Msa0466090 AT5G54060.1 24.000 475 311 14 17 473 6 448 1.61e-21 97.8
Msa0466090 AT1G64920.1 23.780 492 308 20 20 490 2 447 3.56e-21 96.7
Msa0466090 AT3G29630.2 23.888 427 251 13 22 444 4 360 1.27e-20 94.7
Msa0466090 AT1G06000.1 26.619 278 183 8 227 491 164 433 2.02e-20 94.0
Msa0466090 AT4G09500.2 22.944 462 290 17 24 468 6 418 1.13e-19 92.0
Msa0466090 AT2G22930.1 21.767 464 293 17 24 468 6 418 4.66e-18 87.0
Msa0466090 AT1G50580.1 24.186 430 267 15 22 442 4 383 8.68e-18 86.3
Msa0466090 AT4G09500.1 27.429 175 120 3 301 468 219 393 3.06e-17 84.3
Msa0466090 AT4G01070.2 23.177 384 214 12 19 368 3 339 1.00e-15 79.0

Find 113 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 3_3:+66650822 Msa0466090:CDS
CATGTTGACTATTCTGAATT+TGG 0.236044 3_3:+66651513 Msa0466090:three_prime_UTR
TCTTCACCCATTACTATATC+TGG 0.244649 3_3:-66650965 None:intergenic
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_3:-66648347 None:intergenic
TGGAAGAGTGGCTAAGGATT+TGG 0.280456 3_3:+66648508 Msa0466090:CDS
TTAATCACGAGCTCTTTAAA+AGG 0.287752 3_3:-66648419 None:intergenic
GATTGCTCATTTGATTGATT+TGG 0.290032 3_3:+66651682 Msa0466090:three_prime_UTR
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_3:+66648284 Msa0466090:CDS
ATGACTCAGAATGCATAAAA+TGG 0.312996 3_3:+66650810 Msa0466090:CDS
GAAATGTAATAGATTTGTTT+TGG 0.317995 3_3:+66651704 Msa0466090:three_prime_UTR
ACCTTTGCAACGAAAGAGTT+TGG 0.319600 3_3:-66648207 None:intergenic
CAGGTCTGCCTACTATTTGT+TGG 0.330319 3_3:+66651140 Msa0466090:CDS
CAAATACAATATGAGGCTTT+TGG 0.334890 3_3:-66648139 None:intergenic
ACACTTGAAGCAATTTCTTC+AGG 0.336883 3_3:+66651121 Msa0466090:CDS
GGGCCAATGCTATATATGTT+AGG 0.338040 3_3:-66650713 None:intergenic
AGCTTCTACTTGTGGGTTTG+TGG 0.343584 3_3:+66648556 Msa0466090:CDS
TATCTTTGATTATGTTCCTT+TGG 0.343696 3_3:+66651660 Msa0466090:three_prime_UTR
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_3:+66648283 Msa0466090:CDS
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_3:+66651173 Msa0466090:CDS
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_3:+66651274 Msa0466090:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_3:+66648488 Msa0466090:CDS
ATGGTCTCAAATTGAAAATC+TGG 0.364574 3_3:-66648311 None:intergenic
TCAGTACTATATATTAATTA+TGG 0.370543 3_3:+66650854 Msa0466090:CDS
GGAAGAGTGGCTAAGGATTT+GGG 0.372307 3_3:+66648509 Msa0466090:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_3:-66648467 None:intergenic
AACACATTTGAAGAATTAGA+AGG 0.379838 3_3:+66650659 Msa0466090:CDS
TTATGCAACACTTGGAGAAT+AGG 0.381141 3_3:+66651199 Msa0466090:CDS
ATCACTTGAAAGAATTTGCT+TGG 0.385257 3_3:+66650900 Msa0466090:CDS
TATTTGAGTTATATTATAAT+CGG 0.388927 3_3:+66651417 Msa0466090:exon
GCTTCTACTTGTGGGTTTGT+GGG 0.397074 3_3:+66648557 Msa0466090:CDS
TCACTTGAAAGAATTTGCTT+GGG 0.404835 3_3:+66650901 Msa0466090:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 3_3:+66650504 Msa0466090:CDS
GTGAATCCCTTGACACCCTT+AGG 0.405921 3_3:+66650681 Msa0466090:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 3_3:+66650512 Msa0466090:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 3_3:-66651096 None:intergenic
TTTGGACAGCTTCTACTTGT+GGG 0.414329 3_3:+66648549 Msa0466090:CDS
CATAAAATGGTTGAGTAAAT+GGG 0.417737 3_3:+66650823 Msa0466090:CDS
CAGTTTAATTTACCTTTGAA+TGG 0.422394 3_3:-66648620 None:intergenic
GCAAAACCGTATTCTTTCTC+AGG 0.431385 3_3:-66650761 None:intergenic
TGAATTCAACCACAAACGTT+TGG 0.432420 3_3:+66648253 Msa0466090:CDS
CAATGTTGTGTGATTCAACT+AGG 0.436379 3_3:+66648381 Msa0466090:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 3_3:+66651227 Msa0466090:CDS
AATGGTACAAATACAATATG+AGG 0.439304 3_3:-66648146 None:intergenic
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_3:-66648335 None:intergenic
AAACGTTTGGTAAAGTCTCT+TGG 0.443702 3_3:+66648266 Msa0466090:CDS
CTTTGGACAGCTTCTACTTG+TGG 0.458489 3_3:+66648548 Msa0466090:CDS
CTAGATGAAGTCAAGGATAG+AGG 0.462415 3_3:+66651013 Msa0466090:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_3:+66651228 Msa0466090:CDS
GGCCAATGCTATATATGTTA+GGG 0.467636 3_3:-66650712 None:intergenic
ATGAGGCCAGATATAGTAAT+GGG 0.468666 3_3:+66650959 Msa0466090:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_3:-66651163 None:intergenic
CTTGCTCATCCATCAGTTGG+AGG 0.473224 3_3:+66651070 Msa0466090:CDS
GAGACTTTACCAAACGTTTG+TGG 0.473697 3_3:-66648262 None:intergenic
AAGAAAGGCCAACAAATAGT+AGG 0.487158 3_3:-66651148 None:intergenic
CTTCTACTTGTGGGTTTGTG+GGG 0.488063 3_3:+66648558 Msa0466090:CDS
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_3:-66648164 None:intergenic
GTCAACATGACATTGATTGA+TGG 0.501093 3_3:-66651499 None:intergenic
TGAATCCCTTGACACCCTTA+GGG 0.501956 3_3:+66650682 Msa0466090:CDS
ATACAAGTAACTGGAATATG+AGG 0.502466 3_3:-66648458 None:intergenic
AGAACTTGTGATGGAAATGA+TGG 0.507214 3_3:+66651261 Msa0466090:CDS
AACCCTAACATATATAGCAT+TGG 0.514549 3_3:+66650710 Msa0466090:CDS
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_3:-66651063 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.515682 3_3:-66648191 None:intergenic
CCAATCTAAACTTGTATCCA+AGG 0.516376 3_3:-66650504 None:intergenic
GCCAAACTCTTTCGTTGCAA+AGG 0.517868 3_3:+66648206 Msa0466090:CDS
ATTGGCCCACTTCACATGCT+TGG 0.521488 3_3:+66650728 Msa0466090:CDS
TCAGTGACTCTGATGAAGCT+TGG 0.522849 3_3:-66650563 None:intergenic
CTAGTTGAATCACACAACAT+TGG 0.524951 3_3:-66648380 None:intergenic
TGGCTATGACTATTAGGAGG+TGG 0.526998 3_3:-66648119 None:intergenic
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_3:+66648608 Msa0466090:CDS
TGTGGGGTATTTGCAATTCG+AGG 0.529153 3_3:+66648574 Msa0466090:CDS
ACAAAATTGTGTGAGATCAT+CGG 0.529236 3_3:+66650625 Msa0466090:CDS
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_3:-66648170 None:intergenic
AGAGATGAGACAAAACTGCT+TGG 0.532493 3_3:+66651300 Msa0466090:CDS
TGACTCTGATGAAGCTTGGA+AGG 0.534999 3_3:-66650559 None:intergenic
CTTTGCTGGAAGAGTGGCTA+AGG 0.536699 3_3:+66648502 Msa0466090:CDS
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_3:+66648590 Msa0466090:CDS
AGAGATAACAGAACTTGTGA+TGG 0.539853 3_3:+66651252 Msa0466090:CDS
AAGTAGAAGCTGTCCAAAGT+TGG 0.540479 3_3:-66648544 None:intergenic
CAACACTTGGAGAATAGGAA+TGG 0.540623 3_3:+66651204 Msa0466090:CDS
GGTTCCTAACTCATTGTGGT+TGG 0.541326 3_3:+66651092 Msa0466090:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.541970 3_3:-66648190 None:intergenic
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_3:-66648330 None:intergenic
GCCTACCAAGCATGTGAAGT+GGG 0.545551 3_3:-66650733 None:intergenic
AGCTACAGATGCTACTAATG+TGG 0.548442 3_3:+66651336 Msa0466090:CDS
CACTTGAAAGAATTTGCTTG+GGG 0.550965 3_3:+66650902 Msa0466090:CDS
GCATTCGAGAGATCCAACTT+TGG 0.553124 3_3:+66648531 Msa0466090:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.553399 3_3:+66651067 Msa0466090:CDS
TTTAGCCCTAAGGGTGTCAA+GGG 0.554175 3_3:-66650687 None:intergenic
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_3:+66648470 Msa0466090:CDS
TTGCTCATCCATCAGTTGGA+GGG 0.557925 3_3:+66651071 Msa0466090:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 3_3:-66651079 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 3_3:+66651088 Msa0466090:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_3:+66648496 Msa0466090:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_3:+66648320 Msa0466090:CDS
CTATGACTATTAGGAGGTGG+AGG 0.571491 3_3:-66648116 None:intergenic
GTAGGTATTTATGCAACACT+TGG 0.572740 3_3:+66651191 Msa0466090:CDS
TATTGTGGTTCTTGTTGACA+AGG 0.574072 3_3:+66651611 Msa0466090:three_prime_UTR
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 3_3:-66650495 None:intergenic
GCTACAGATGCTACTAATGT+GGG 0.582080 3_3:+66651337 Msa0466090:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 3_3:+66650958 Msa0466090:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 3_3:+66650732 Msa0466090:CDS
TTAATATATAGTACTGAGCA+AGG 0.597770 3_3:-66650848 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_3:+66651029 Msa0466090:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.610099 3_3:-66650734 None:intergenic
TGAGACAAAACTGCTTGGAG+TGG 0.611958 3_3:+66651305 Msa0466090:CDS
GTATGGACAGGAAAATATTG+TGG 0.616787 3_3:+66651596 Msa0466090:three_prime_UTR
TTTGTACCATTTCCAGCACA+AGG 0.617582 3_3:+66648158 Msa0466090:CDS
ACTTCATCTAGAAAATCTTG+TGG 0.630695 3_3:-66651001 None:intergenic
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_3:-66651676 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.648111 3_3:+66651265 Msa0466090:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_3:-66648240 None:intergenic
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_3:+66651340 Msa0466090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAATGTATTTAAAAAG+TGG - chr3_3:66648767-66648786 None:intergenic 10.0%
!! AAAAAAAATTAAAGTTGTAT+TGG + chr3_3:66649382-66649401 Msa0466090:intron 10.0%
!! AAAAAAAAAAAATATCAGTT+GGG - chr3_3:66649898-66649917 None:intergenic 10.0%
!! AAAAAAAAAAAAATATCAGT+TGG - chr3_3:66649899-66649918 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG - chr3_3:66650048-66650067 None:intergenic 10.0%
!! ATTAAAATCAATATAAACAA+AGG - chr3_3:66650256-66650275 None:intergenic 10.0%
!!! TATTTGAGTTATATTATAAT+CGG + chr3_3:66651417-66651436 Msa0466090:exon 10.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG + chr3_3:66648953-66648972 Msa0466090:intron 15.0%
!!! TTATTTTTTGGAATATACTT+AGG - chr3_3:66649001-66649020 None:intergenic 15.0%
!! AAATAGAATGAAATAATCAT+TGG + chr3_3:66649256-66649275 Msa0466090:intron 15.0%
!!! TTTTTTTTTGAATCATGATA+TGG + chr3_3:66650132-66650151 Msa0466090:intron 15.0%
!! TCAGTACTATATATTAATTA+TGG + chr3_3:66650854-66650873 Msa0466090:CDS 15.0%
!! GAAAATTATGAAGAAAAAAA+AGG - chr3_3:66651572-66651591 None:intergenic 15.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG - chr3_3:66649304-66649323 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG - chr3_3:66649305-66649324 None:intergenic 20.0%
!!! CTGTTTAGGTAATTTTTTTT+TGG + chr3_3:66649855-66649874 Msa0466090:intron 20.0%
!! TTAATGCGATATGAATATTT+AGG + chr3_3:66650015-66650034 Msa0466090:intron 20.0%
!!! ATAGTAAGTTACCATTTTTA+TGG + chr3_3:66650933-66650952 Msa0466090:CDS 20.0%
!! AAATTAACTATGATGTGAAA+AGG + chr3_3:66651227-66651246 Msa0466090:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG + chr3_3:66651228-66651247 Msa0466090:CDS 20.0%
!!! GAAATGTAATAGATTTGTTT+TGG + chr3_3:66651704-66651723 Msa0466090:three_prime_UTR 20.0%
! AATGGTACAAATACAATATG+AGG - chr3_3:66648149-66648168 None:intergenic 25.0%
!! CAGTTTAATTTACCTTTGAA+TGG - chr3_3:66648623-66648642 None:intergenic 25.0%
!! GAATATACTTAGGTACTTTT+GGG - chr3_3:66648991-66649010 None:intergenic 25.0%
! AGTCAATAAGTAGTTCAAAT+CGG + chr3_3:66649156-66649175 Msa0466090:intron 25.0%
! GAGTACATTCATAATATTCA+TGG + chr3_3:66649475-66649494 Msa0466090:intron 25.0%
! ATTTGACGCATTTAATACAA+GGG - chr3_3:66649537-66649556 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG - chr3_3:66649538-66649557 None:intergenic 25.0%
!! TTAAATGCGTCAAATTTTGA+CGG + chr3_3:66649542-66649561 Msa0466090:intron 25.0%
!!! ATTAGTTTAGCTACTTTTCT+TGG - chr3_3:66649723-66649742 None:intergenic 25.0%
!!! ATTTTTTTTTGGTACAAGAG+AGG + chr3_3:66649866-66649885 Msa0466090:intron 25.0%
!!! TTTTTTTTTGGTACAAGAGA+GGG + chr3_3:66649867-66649886 Msa0466090:intron 25.0%
! AAATGTACATCACAGAAATT+AGG - chr3_3:66650202-66650221 None:intergenic 25.0%
! AACACATTTGAAGAATTAGA+AGG + chr3_3:66650659-66650678 Msa0466090:CDS 25.0%
! CATAAAATGGTTGAGTAAAT+GGG + chr3_3:66650823-66650842 Msa0466090:CDS 25.0%
!! TTAATATATAGTACTGAGCA+AGG - chr3_3:66650851-66650870 None:intergenic 25.0%
!!! TACCATTTTTATGGATAATG+AGG + chr3_3:66650942-66650961 Msa0466090:CDS 25.0%
!! CTTCATAATTTTCAACTGTA+TGG + chr3_3:66651579-66651598 Msa0466090:three_prime_UTR 25.0%
! TATCTTTGATTATGTTCCTT+TGG + chr3_3:66651660-66651679 Msa0466090:three_prime_UTR 25.0%
! CAAATACAATATGAGGCTTT+TGG - chr3_3:66648142-66648161 None:intergenic 30.0%
ATGGTCTCAAATTGAAAATC+TGG - chr3_3:66648314-66648333 None:intergenic 30.0%
TTAATCACGAGCTCTTTAAA+AGG - chr3_3:66648422-66648441 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG - chr3_3:66648461-66648480 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG - chr3_3:66648470-66648489 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG + chr3_3:66648470-66648489 Msa0466090:CDS 30.0%
! GGAATATACTTAGGTACTTT+TGG - chr3_3:66648992-66649011 None:intergenic 30.0%
!! CTACTTATTGACTCGTTTAT+TGG - chr3_3:66649149-66649168 None:intergenic 30.0%
TGTGAGAGAAAAGTTGAAAA+GGG + chr3_3:66649349-66649368 Msa0466090:intron 30.0%
AAAGTTGAAAAGGGTAAAGT+TGG + chr3_3:66649358-66649377 Msa0466090:intron 30.0%
TTAACGATTAGAATATGCCT+CGG - chr3_3:66649822-66649841 None:intergenic 30.0%
!!! ACTATTTTTGGAGCTTGATA+TGG + chr3_3:66650101-66650120 Msa0466090:intron 30.0%
ACAAAATTGTGTGAGATCAT+CGG + chr3_3:66650625-66650644 Msa0466090:CDS 30.0%
AACCCTAACATATATAGCAT+TGG + chr3_3:66650710-66650729 Msa0466090:CDS 30.0%
! CATTTTCCTGAGAAAGAATA+CGG + chr3_3:66650755-66650774 Msa0466090:CDS 30.0%
ATGACTCAGAATGCATAAAA+TGG + chr3_3:66650810-66650829 Msa0466090:CDS 30.0%
GCATAAAATGGTTGAGTAAA+TGG + chr3_3:66650822-66650841 Msa0466090:CDS 30.0%
! ATCACTTGAAAGAATTTGCT+TGG + chr3_3:66650900-66650919 Msa0466090:CDS 30.0%
! TCACTTGAAAGAATTTGCTT+GGG + chr3_3:66650901-66650920 Msa0466090:CDS 30.0%
ACTTCATCTAGAAAATCTTG+TGG - chr3_3:66651004-66651023 None:intergenic 30.0%
! AGATTTTCTAGATGAAGTCA+AGG + chr3_3:66651006-66651025 Msa0466090:CDS 30.0%
ATAGAGGATACATAACAAGT+TGG + chr3_3:66651029-66651048 Msa0466090:CDS 30.0%
! CATGTTGACTATTCTGAATT+TGG + chr3_3:66651513-66651532 Msa0466090:three_prime_UTR 30.0%
! TAATTTTCAACTGTATGGAC+AGG + chr3_3:66651584-66651603 Msa0466090:three_prime_UTR 30.0%
GATTGCTCATTTGATTGATT+TGG + chr3_3:66651682-66651701 Msa0466090:three_prime_UTR 30.0%
!! TTTTGGCTATGACTATTAGG+AGG - chr3_3:66648125-66648144 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG - chr3_3:66648243-66648262 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG + chr3_3:66648253-66648272 Msa0466090:CDS 35.0%
AAACGTTTGGTAAAGTCTCT+TGG + chr3_3:66648266-66648285 Msa0466090:CDS 35.0%
GTTGCATCTTTATCTGATTC+TGG - chr3_3:66648350-66648369 None:intergenic 35.0%
CTAGTTGAATCACACAACAT+TGG - chr3_3:66648383-66648402 None:intergenic 35.0%
CAATGTTGTGTGATTCAACT+AGG + chr3_3:66648381-66648400 Msa0466090:CDS 35.0%
AGAGGAATTCTTCCATTCAA+AGG + chr3_3:66648608-66648627 Msa0466090:CDS 35.0%
TATGAATCTGACGTACAGAT+CGG - chr3_3:66648863-66648882 None:intergenic 35.0%
!! TAAGTAGTGGGCCAATAAAT+GGG + chr3_3:66649106-66649125 Msa0466090:intron 35.0%
AGTTCAAATCGGATTCTTTG+TGG + chr3_3:66649167-66649186 Msa0466090:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr3_3:66649412-66649431 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG + chr3_3:66649214-66649233 Msa0466090:intron 35.0%
GTGTGAGAGAAAAGTTGAAA+AGG + chr3_3:66649348-66649367 Msa0466090:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr3_3:66649412-66649431 Msa0466090:intron 35.0%
! ACTACATTTTTGTTGGTCCT+TGG - chr3_3:66649604-66649623 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG + chr3_3:66649603-66649622 Msa0466090:intron 35.0%
AGGACCAACAAAAATGTAGT+GGG + chr3_3:66649604-66649623 Msa0466090:intron 35.0%
TGGTTTAGAAGAGTTAGTCA+AGG - chr3_3:66649703-66649722 None:intergenic 35.0%
ATGTTAGCAAACTTCTCCAT+CGG + chr3_3:66649741-66649760 Msa0466090:intron 35.0%
TAACGTTATGATTCATCCGA+TGG - chr3_3:66649760-66649779 None:intergenic 35.0%
! GATGAAAATTTTGTTGCCGA+TGG + chr3_3:66650479-66650498 Msa0466090:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG - chr3_3:66650507-66650526 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG + chr3_3:66650504-66650523 Msa0466090:CDS 35.0%
ACAAGTTTAGATTGGATCTC+TGG + chr3_3:66650512-66650531 Msa0466090:CDS 35.0%
! GATGATCTCACACAATTTTG+TGG - chr3_3:66650626-66650645 None:intergenic 35.0%
GGCCAATGCTATATATGTTA+GGG - chr3_3:66650715-66650734 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG + chr3_3:66650902-66650921 Msa0466090:CDS 35.0%
GGCCTCATTATCCATAAAAA+TGG - chr3_3:66650947-66650966 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG + chr3_3:66650958-66650977 Msa0466090:CDS 35.0%
ATGAGGCCAGATATAGTAAT+GGG + chr3_3:66650959-66650978 Msa0466090:CDS 35.0%
TCTTCACCCATTACTATATC+TGG - chr3_3:66650968-66650987 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG - chr3_3:66651099-66651118 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG + chr3_3:66651121-66651140 Msa0466090:CDS 35.0%
AAGAAAGGCCAACAAATAGT+AGG - chr3_3:66651151-66651170 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG + chr3_3:66651173-66651192 Msa0466090:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66651191-66651210 Msa0466090:CDS 35.0%
TTATGCAACACTTGGAGAAT+AGG + chr3_3:66651199-66651218 Msa0466090:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG + chr3_3:66651252-66651271 Msa0466090:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG + chr3_3:66651261-66651280 Msa0466090:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG + chr3_3:66651274-66651293 Msa0466090:CDS 35.0%
! GTCAACATGACATTGATTGA+TGG - chr3_3:66651502-66651521 None:intergenic 35.0%
GTATGGACAGGAAAATATTG+TGG + chr3_3:66651596-66651615 Msa0466090:three_prime_UTR 35.0%
TATTGTGGTTCTTGTTGACA+AGG + chr3_3:66651611-66651630 Msa0466090:three_prime_UTR 35.0%
CAATCAAATGAGCAATCCAA+AGG - chr3_3:66651679-66651698 None:intergenic 35.0%
!! GGCTTTTGGCTATGACTATT+AGG - chr3_3:66648128-66648147 None:intergenic 40.0%
TTTGTACCATTTCCAGCACA+AGG + chr3_3:66648158-66648177 Msa0466090:CDS 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG - chr3_3:66648193-66648212 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG - chr3_3:66648194-66648213 None:intergenic 40.0%
ACCTTTGCAACGAAAGAGTT+TGG - chr3_3:66648210-66648229 None:intergenic 40.0%
GAGACTTTACCAAACGTTTG+TGG - chr3_3:66648265-66648284 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG + chr3_3:66648283-66648302 Msa0466090:CDS 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG + chr3_3:66648284-66648303 Msa0466090:CDS 40.0%
! CAATTTGAGACCATACCTGA+TGG + chr3_3:66648320-66648339 Msa0466090:CDS 40.0%
TTCTGGTAAACCATCAGGTA+TGG - chr3_3:66648333-66648352 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG - chr3_3:66648338-66648357 None:intergenic 40.0%
GATGGCAATTATGACTTTGC+TGG + chr3_3:66648488-66648507 Msa0466090:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG + chr3_3:66648496-66648515 Msa0466090:CDS 40.0%
AAGTAGAAGCTGTCCAAAGT+TGG - chr3_3:66648547-66648566 None:intergenic 40.0%
TTTGGACAGCTTCTACTTGT+GGG + chr3_3:66648549-66648568 Msa0466090:CDS 40.0%
ACTACTTACTAATAGGGGTG+TGG - chr3_3:66649094-66649113 None:intergenic 40.0%
ACACCCCTATTAGTAAGTAG+TGG + chr3_3:66649093-66649112 Msa0466090:intron 40.0%
CACCCCTATTAGTAAGTAGT+GGG + chr3_3:66649094-66649113 Msa0466090:intron 40.0%
TGGCCCACTACTTACTAATA+GGG - chr3_3:66649100-66649119 None:intergenic 40.0%
TTGGCCCACTACTTACTAAT+AGG - chr3_3:66649101-66649120 None:intergenic 40.0%
!! GTAAGTAGTGGGCCAATAAA+TGG + chr3_3:66649105-66649124 Msa0466090:intron 40.0%
CCAGTGTCTATCCCATTTAT+TGG - chr3_3:66649120-66649139 None:intergenic 40.0%
CCAATAAATGGGATAGACAC+TGG + chr3_3:66649117-66649136 Msa0466090:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr3_3:66649453-66649472 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_3:66649453-66649472 Msa0466090:intron 40.0%
TTCATGGTCATTGAGTCACA+TGG + chr3_3:66649491-66649510 Msa0466090:intron 40.0%
!! ATTTTGACGGATGCCAATCA+TGG + chr3_3:66649555-66649574 Msa0466090:intron 40.0%
AGAGTTAGTCAAGGCAATCT+TGG - chr3_3:66649694-66649713 None:intergenic 40.0%
TGAAAATGACATTAGCACCG+AGG + chr3_3:66649802-66649821 Msa0466090:intron 40.0%
ATGCGATATGTGCACTGTTT+AGG + chr3_3:66649841-66649860 Msa0466090:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG - chr3_3:66650171-66650190 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG - chr3_3:66650175-66650194 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG - chr3_3:66650184-66650203 None:intergenic 40.0%
TCTACAATCGATCATGTGTG+TGG - chr3_3:66650378-66650397 None:intergenic 40.0%
!!! GTTAGGGTTTTTAGCCCTAA+GGG - chr3_3:66650699-66650718 None:intergenic 40.0%
!!! TGTTAGGGTTTTTAGCCCTA+AGG - chr3_3:66650700-66650719 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG - chr3_3:66650716-66650735 None:intergenic 40.0%
GCAAAACCGTATTCTTTCTC+AGG - chr3_3:66650764-66650783 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG + chr3_3:66650783-66650802 Msa0466090:CDS 40.0%
CTAGATGAAGTCAAGGATAG+AGG + chr3_3:66651013-66651032 Msa0466090:CDS 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG - chr3_3:66651166-66651185 None:intergenic 40.0%
CAACACTTGGAGAATAGGAA+TGG + chr3_3:66651204-66651223 Msa0466090:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG + chr3_3:66651265-66651284 Msa0466090:CDS 40.0%
AGAGATGAGACAAAACTGCT+TGG + chr3_3:66651300-66651319 Msa0466090:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG + chr3_3:66651336-66651355 Msa0466090:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG + chr3_3:66651337-66651356 Msa0466090:CDS 40.0%
CTATGACTATTAGGAGGTGG+AGG - chr3_3:66648119-66648138 None:intergenic 45.0%
TGGCTATGACTATTAGGAGG+TGG - chr3_3:66648122-66648141 None:intergenic 45.0%
ACATGACCTTGTGCTGGAAA+TGG - chr3_3:66648167-66648186 None:intergenic 45.0%
GCCAAACTCTTTCGTTGCAA+AGG + chr3_3:66648206-66648225 Msa0466090:CDS 45.0%
TGGAAGAGTGGCTAAGGATT+TGG + chr3_3:66648508-66648527 Msa0466090:CDS 45.0%
GGAAGAGTGGCTAAGGATTT+GGG + chr3_3:66648509-66648528 Msa0466090:CDS 45.0%
GCATTCGAGAGATCCAACTT+TGG + chr3_3:66648531-66648550 Msa0466090:CDS 45.0%
CTTTGGACAGCTTCTACTTG+TGG + chr3_3:66648548-66648567 Msa0466090:CDS 45.0%
AGCTTCTACTTGTGGGTTTG+TGG + chr3_3:66648556-66648575 Msa0466090:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+GGG + chr3_3:66648557-66648576 Msa0466090:CDS 45.0%
CTTCTACTTGTGGGTTTGTG+GGG + chr3_3:66648558-66648577 Msa0466090:CDS 45.0%
! TGTGGGGTATTTGCAATTCG+AGG + chr3_3:66648574-66648593 Msa0466090:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG + chr3_3:66648590-66648609 Msa0466090:CDS 45.0%
GGCCCACTACTTACTAATAG+GGG - chr3_3:66649099-66649118 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr3_3:66649452-66649471 None:intergenic 45.0%
!! ATGAGTGTCGCTTTAGGCTT+TGG + chr3_3:66649220-66649239 Msa0466090:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_3:66649452-66649471 Msa0466090:intron 45.0%
GCAAGTGACAACTGTGTCTA+GGG - chr3_3:66649582-66649601 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG - chr3_3:66649611-66649630 None:intergenic 45.0%
TCAGAGAGAGAGAGAGAGAT+TGG + chr3_3:66649644-66649663 Msa0466090:intron 45.0%
GTTTAGAAGAGCTAGTAGCG+TGG - chr3_3:66649672-66649691 None:intergenic 45.0%
ATTTGCATACACTGTCAGCG+TGG + chr3_3:66650274-66650293 Msa0466090:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG - chr3_3:66650498-66650517 None:intergenic 45.0%
TGACTCTGATGAAGCTTGGA+AGG - chr3_3:66650562-66650581 None:intergenic 45.0%
TCAGTGACTCTGATGAAGCT+TGG - chr3_3:66650566-66650585 None:intergenic 45.0%
TGAATCCCTTGACACCCTTA+GGG + chr3_3:66650682-66650701 Msa0466090:CDS 45.0%
!! TTTAGCCCTAAGGGTGTCAA+GGG - chr3_3:66650690-66650709 None:intergenic 45.0%
!!! TTTTAGCCCTAAGGGTGTCA+AGG - chr3_3:66650691-66650710 None:intergenic 45.0%
! GAATACGGTTTTGCAGCAAG+TGG + chr3_3:66650770-66650789 Msa0466090:CDS 45.0%
TTGCTCATCCATCAGTTGGA+GGG + chr3_3:66651071-66651090 Msa0466090:CDS 45.0%
GGTTCCTAACTCATTGTGGT+TGG + chr3_3:66651092-66651111 Msa0466090:CDS 45.0%
CAGGTCTGCCTACTATTTGT+TGG + chr3_3:66651140-66651159 Msa0466090:CDS 45.0%
TGAGACAAAACTGCTTGGAG+TGG + chr3_3:66651305-66651324 Msa0466090:CDS 45.0%
ACAGATGCTACTAATGTGGG+AGG + chr3_3:66651340-66651359 Msa0466090:CDS 45.0%
!!! TAAATAACTAAATTATTTTT+TGG - chr3_3:66649013-66649032 None:intergenic 5.0%
!!! AAAATATATATTACTATTTT+TGG + chr3_3:66650089-66650108 Msa0466090:intron 5.0%
CTTTGCTGGAAGAGTGGCTA+AGG + chr3_3:66648502-66648521 Msa0466090:CDS 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG - chr3_3:66649571-66649590 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG - chr3_3:66649583-66649602 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG + chr3_3:66649584-66649603 Msa0466090:intron 50.0%
! TTTTGTTGCCGATGGCACCT+TGG + chr3_3:66650487-66650506 Msa0466090:CDS 50.0%
GTGAATCCCTTGACACCCTT+AGG + chr3_3:66650681-66650700 Msa0466090:CDS 50.0%
ATTGGCCCACTTCACATGCT+TGG + chr3_3:66650728-66650747 Msa0466090:CDS 50.0%
GCCTACCAAGCATGTGAAGT+GGG - chr3_3:66650736-66650755 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG - chr3_3:66650737-66650756 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG - chr3_3:66651066-66651085 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG + chr3_3:66651067-66651086 Msa0466090:CDS 50.0%
CTTGCTCATCCATCAGTTGG+AGG + chr3_3:66651070-66651089 Msa0466090:CDS 50.0%
GTTAGGAACCCTCCAACTGA+TGG - chr3_3:66651082-66651101 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG + chr3_3:66651088-66651107 Msa0466090:CDS 50.0%
GGGTTCACATGACCTTGTGC+TGG - chr3_3:66648173-66648192 None:intergenic 55.0%
GCCCACTTCACATGCTTGGT+AGG + chr3_3:66650732-66650751 Msa0466090:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66648080 66651743 66648080 ID=Msa0466090;Name=Msa0466090
chr3_3 mRNA 66648080 66651743 66648080 ID=Msa0466090-mRNA-1;Parent=Msa0466090;Name=Msa0466090-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|0.5|1|1|1|2|320|497
chr3_3 exon 66648080 66648629 66648080 ID=Msa0466090-mRNA-1:exon:15142;Parent=Msa0466090-mRNA-1
chr3_3 exon 66650480 66651743 66650480 ID=Msa0466090-mRNA-1:exon:15143;Parent=Msa0466090-mRNA-1
chr3_3 CDS 66648080 66648629 66648080 ID=Msa0466090-mRNA-1:cds;Parent=Msa0466090-mRNA-1
chr3_3 CDS 66650480 66651423 66650480 ID=Msa0466090-mRNA-1:cds;Parent=Msa0466090-mRNA-1
chr3_3 three_prime_UTR 66651424 66651743 66651424 ID=Msa0466090-mRNA-1:three_prime_utr;Parent=Msa0466090-mRNA-1
Gene Sequence

>Msa0466090

ATGTCTCAAGAAAAGCAAAATAAAATAGAGTATACTCCTCCACCTCCTAATAGTCATAGCCAAAAGCCTCATATTGTATTTGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCTTTCGTTGCAAAGGTTTTCACGTAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCAGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAAGATATTCCAATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTTAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAGGATTTGGGCATTCGAGAGATCCAACTTTGGACAGCTTCTACTTGTGGGTTTGTGGGGTATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATCAGAGTCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTGAGCCACAAAATTGTGTGAGATCATCGGCAATCATCATTAACACATTTGAAGAATTAGAAGGTGAATCCCTTGACACCCTTAGGGCTAAAAACCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCCTGAGAAAGAATACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAGTTACCATTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAAGTCAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAGAATAGGAATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA

Protein sequence

>Msa0466090

MSQEKQNKIEYTPPPPNSHSQKPHIVFVPFPAQGHVNPFMQLAKLFRCKGFHVTFVNTEFNHKRLVKSLGADFVKGLPDFQFETIPDGLPESDKDATQDIPMLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRVTDLNDIMFDFFCVEPQNCVRSSAIIINTFEELEGESLDTLRAKNPNIYSIGPLHMLGRHFPEKEYGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTDHHLKEFAWGIANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWRIGMEINYDVKREEITELVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*