AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0722660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722660 MtrunA17_Chr3g0101471 94.257 1306 75 0 1 1306 1 1306 0.0 2537
Msa0722660 MtrunA17_Chr3g0101441 89.985 1308 129 1 1 1306 1 1308 0.0 2399
Msa0722660 MtrunA17_Chr3g0101461 89.297 1308 138 1 1 1306 1 1308 0.0 2387
Msa0722660 MtrunA17_Chr5g0445741 68.049 1302 402 3 7 1304 204 1495 0.0 1861
Msa0722660 MtrunA17_Chr5g0412721 67.334 1298 416 4 7 1302 197 1488 0.0 1836
Msa0722660 MtrunA17_Chr3g0101481 65.668 1302 437 4 5 1304 206 1499 0.0 1795
Msa0722660 MtrunA17_Chr5g0445671 70.481 1101 314 3 193 1292 2 1092 0.0 1628
Msa0722660 MtrunA17_Chr1g0183191 52.730 1282 588 3 35 1301 247 1525 0.0 1368
Msa0722660 MtrunA17_Chr7g0262191 52.496 1282 593 3 35 1301 245 1525 0.0 1349
Msa0722660 MtrunA17_Chr8g0337121 51.875 1280 594 6 35 1302 232 1501 0.0 1337
Msa0722660 MtrunA17_Chr8g0337191 51.456 1271 613 3 35 1302 212 1481 0.0 1324
Msa0722660 MtrunA17_Chr8g0376961 47.144 1313 627 16 7 1301 176 1439 0.0 1210
Msa0722660 MtrunA17_Chr3g0085281 45.585 1325 649 16 8 1301 179 1462 0.0 1157
Msa0722660 MtrunA17_Chr6g0463131 43.931 1277 664 13 35 1296 226 1465 0.0 1077
Msa0722660 MtrunA17_Chr2g0295911 42.408 1271 709 8 35 1301 250 1501 0.0 1061
Msa0722660 MtrunA17_Chr8g0341751 43.026 1269 700 9 35 1296 27 1279 0.0 1060
Msa0722660 MtrunA17_Chr6g0463121 43.287 1296 691 9 12 1296 202 1464 0.0 1058
Msa0722660 MtrunA17_Chr6g0463141 41.975 1296 702 8 35 1303 224 1496 0.0 1044
Msa0722660 MtrunA17_Chr2g0295901 42.068 1267 716 5 35 1301 250 1498 0.0 1043
Msa0722660 MtrunA17_Chr8g0341761 42.757 1284 697 11 30 1302 193 1449 0.0 1043
Msa0722660 MtrunA17_Chr6g0463151 42.406 1297 711 9 14 1303 22 1289 0.0 1041
Msa0722660 MtrunA17_Chr6g0463181 42.299 1279 694 10 22 1296 210 1448 0.0 1041
Msa0722660 MtrunA17_Chr6g0463201 42.913 1270 688 11 35 1296 229 1469 0.0 1038
Msa0722660 MtrunA17_Chr1g0195691 42.005 1307 712 13 8 1301 240 1513 0.0 1036
Msa0722660 MtrunA17_Chr6g0472531 42.936 1267 691 7 35 1296 176 1415 0.0 1034
Msa0722660 MtrunA17_Chr6g0463211 42.615 1300 681 14 35 1296 263 1535 0.0 1029
Msa0722660 MtrunA17_Chr8g0363771 41.686 1269 723 6 35 1301 245 1498 0.0 1028
Msa0722660 MtrunA17_Chr2g0295921 42.138 1272 711 8 35 1301 262 1513 0.0 1027
Msa0722660 MtrunA17_Chr8g0353781 42.577 1273 703 8 30 1296 196 1446 0.0 1024
Msa0722660 MtrunA17_Chr6g0471281 42.494 1299 693 11 14 1296 205 1465 0.0 1023
Msa0722660 MtrunA17_Chr8g0341811 41.563 1292 690 13 13 1296 33 1267 0.0 987
Msa0722660 MtrunA17_Chr5g0412921 60.074 809 313 3 7 814 191 990 0.0 986
Msa0722660 MtrunA17_Chr8g0341851 41.306 1271 712 8 38 1296 208 1456 0.0 981
Msa0722660 MtrunA17_Chr8g0353541 43.398 1083 596 6 224 1301 1 1071 0.0 924
Msa0722660 MtrunA17_Chr2g0285731 33.871 1302 815 11 16 1298 208 1482 0.0 724
Msa0722660 MtrunA17_Chr3g0080941 34.510 1275 776 17 40 1293 232 1468 0.0 721
Msa0722660 MtrunA17_Chr3g0080981 33.205 1295 803 16 21 1293 213 1467 0.0 710
Msa0722660 MtrunA17_Chr2g0333911 35.182 1046 602 21 284 1293 1 1006 0.0 566
Msa0722660 MtrunA17_Chr8g0359291 42.878 674 354 6 626 1296 1 646 7.14e-180 546
Msa0722660 MtrunA17_Chr6g0463391 42.582 674 359 6 626 1296 1 649 1.14e-178 543
Msa0722660 MtrunA17_Chr6g0484351 42.560 672 360 6 626 1296 1 647 6.97e-178 541
Msa0722660 MtrunA17_Chr6g0484351 26.378 254 145 6 443 675 424 656 4.89e-15 80.1
Msa0722660 MtrunA17_Chr1g0202221 38.221 832 466 15 7 830 204 995 4.59e-175 556
Msa0722660 MtrunA17_Chr1g0202221 46.278 497 232 3 803 1296 907 1371 6.03e-141 464
Msa0722660 MtrunA17_Chr1g0202221 26.904 197 130 2 1077 1272 637 820 3.68e-12 71.6
Msa0722660 MtrunA17_Chr5g0412941 79.677 310 62 1 996 1304 20 329 2.34e-174 519
Msa0722660 MtrunA17_Chr5g0412941 23.502 217 151 3 458 660 112 327 6.17e-12 68.6
Msa0722660 MtrunA17_Chr6g0484361 43.456 596 331 5 35 625 206 800 5.37e-148 468
Msa0722660 MtrunA17_Chr6g0463401 40.984 610 347 4 12 614 209 812 4.61e-147 466
Msa0722660 MtrunA17_Chr5g0445701 78.049 246 48 1 1065 1304 1 246 7.45e-133 407
Msa0722660 MtrunA17_Chr5g0445701 26.984 189 124 4 448 623 13 200 2.62e-11 65.5
Msa0722660 MtrunA17_Chr8g0341801 46.868 431 225 2 874 1301 1 430 9.07e-133 414
Msa0722660 MtrunA17_Chr8g0341801 28.384 229 132 8 448 654 204 422 7.94e-13 72.4
Msa0722660 MtrunA17_Chr8g0341791 43.503 354 188 4 489 841 10 352 1.94e-91 299
Msa0722660 MtrunA17_Chr8g0341781 34.864 479 302 3 14 485 15 490 6.43e-80 272
Msa0722660 MtrunA17_Chr5g0412931 64.972 177 62 0 818 994 1 177 1.01e-77 254
Msa0722660 MtrunA17_Chr8g0349441 51.442 208 97 1 387 594 2 205 3.89e-62 211
Msa0722660 MtrunA17_Chr7g0233901 23.996 896 572 27 448 1282 375 1222 2.58e-57 218
Msa0722660 MtrunA17_Chr7g0233901 26.143 547 339 20 792 1302 85 602 3.03e-36 149
Msa0722660 MtrunA17_Chr7g0233901 27.586 232 150 4 430 644 995 1225 3.08e-19 94.7
Msa0722660 MtrunA17_Chr7g0264631 23.333 900 601 24 448 1289 444 1312 5.04e-53 204
Msa0722660 MtrunA17_Chr7g0264631 28.750 240 166 4 1058 1293 424 662 2.64e-26 117
Msa0722660 MtrunA17_Chr7g0264631 30.159 252 153 5 411 646 1066 1310 3.82e-24 110
Msa0722660 MtrunA17_Chr2g0285311 24.592 919 582 27 452 1300 391 1268 1.03e-52 203
Msa0722660 MtrunA17_Chr2g0285311 24.605 569 383 14 759 1300 70 619 1.41e-37 154
Msa0722660 MtrunA17_Chr2g0285311 29.515 227 141 5 448 657 1043 1267 2.08e-18 92.0
Msa0722660 MtrunA17_Chr5g0410921 23.602 894 588 25 450 1293 376 1224 1.85e-52 202
Msa0722660 MtrunA17_Chr5g0410921 23.826 575 393 17 738 1293 43 591 4.46e-30 129
Msa0722660 MtrunA17_Chr5g0410921 28.746 327 197 9 342 641 896 1213 2.20e-26 117
Msa0722660 MtrunA17_Chr6g0481921 24.255 940 603 31 430 1300 271 1170 2.49e-52 201
Msa0722660 MtrunA17_Chr6g0481921 30.962 239 161 3 1058 1293 269 506 2.18e-34 144
Msa0722660 MtrunA17_Chr2g0285191 24.866 933 605 31 430 1300 398 1296 1.08e-51 199
Msa0722660 MtrunA17_Chr2g0285191 24.558 509 348 12 804 1293 142 633 2.48e-36 150
Msa0722660 MtrunA17_Chr2g0285191 29.961 257 154 6 425 657 1041 1295 4.02e-19 94.4
Msa0722660 MtrunA17_Chr8g0344651 24.518 881 589 31 448 1282 616 1466 1.51e-51 199
Msa0722660 MtrunA17_Chr8g0344651 23.848 499 340 17 805 1282 343 822 1.41e-26 118
Msa0722660 MtrunA17_Chr8g0344651 32.547 212 128 3 446 643 1258 1468 7.26e-22 103
Msa0722660 MtrunA17_Chr2g0285301 24.862 905 574 30 458 1294 392 1258 2.03e-51 199
Msa0722660 MtrunA17_Chr2g0285301 23.497 549 367 16 775 1294 76 600 2.02e-34 144
Msa0722660 MtrunA17_Chr2g0285301 30.973 226 139 4 448 657 1039 1263 5.68e-19 93.6
Msa0722660 MtrunA17_Chr8g0371961 68.800 125 21 1 1065 1189 7 113 1.09e-50 174
Msa0722660 MtrunA17_Chr5g0445691 50.000 182 86 1 7 183 206 387 2.29e-50 183
Msa0722660 MtrunA17_Chr6g0453051 23.395 919 611 26 430 1293 363 1243 4.10e-47 185
Msa0722660 MtrunA17_Chr6g0453051 23.853 545 362 18 775 1293 80 597 2.16e-29 127
Msa0722660 MtrunA17_Chr4g0061601 25.981 535 366 15 764 1283 94 613 1.44e-37 151
Msa0722660 MtrunA17_Chr4g0061601 26.562 320 219 3 348 652 305 623 9.13e-27 117
Msa0722660 MtrunA17_Chr3g0119381 23.260 546 368 14 775 1294 115 635 1.46e-36 150
Msa0722660 MtrunA17_Chr3g0119381 30.833 240 160 4 1058 1293 1055 1292 2.72e-26 117
Msa0722660 MtrunA17_Chr3g0119381 31.301 246 135 8 409 637 391 619 1.24e-21 102
Msa0722660 MtrunA17_Chr3g0119381 31.429 210 128 3 461 655 1088 1296 1.29e-19 95.9
Msa0722660 MtrunA17_Chr1g0194031 22.702 533 366 12 785 1293 109 619 1.72e-35 146
Msa0722660 MtrunA17_Chr1g0194031 29.515 227 143 6 430 641 384 608 2.74e-20 97.8
Msa0722660 MtrunA17_Chr4g0069351 24.399 541 365 15 775 1293 95 613 2.88e-35 146
Msa0722660 MtrunA17_Chr4g0069351 23.669 507 336 14 823 1302 798 1280 1.32e-29 128
Msa0722660 MtrunA17_Chr4g0069351 33.333 222 132 3 448 654 1054 1274 5.73e-24 110
Msa0722660 MtrunA17_Chr4g0069351 31.579 247 139 7 409 640 370 601 1.50e-21 102
Msa0722660 MtrunA17_Chr4g0069361 24.497 547 357 14 775 1293 95 613 2.98e-35 146
Msa0722660 MtrunA17_Chr4g0069361 23.194 526 351 14 805 1302 780 1280 7.74e-29 125
Msa0722660 MtrunA17_Chr4g0069361 33.628 226 134 3 450 660 1056 1280 2.48e-25 114
Msa0722660 MtrunA17_Chr4g0069361 30.769 247 141 7 409 640 370 601 3.70e-20 97.4
Msa0722660 MtrunA17_Chr3g0123411 31.760 233 155 3 1058 1287 903 1134 2.04e-34 144
Msa0722660 MtrunA17_Chr3g0123411 31.004 229 154 3 1058 1283 247 474 1.57e-22 105
Msa0722660 MtrunA17_Chr3g0123411 27.619 315 197 8 355 646 828 1134 4.87e-22 103
Msa0722660 MtrunA17_Chr3g0123411 38.776 147 84 3 498 641 330 473 1.95e-19 95.1
Msa0722660 MtrunA17_Chr3g0138211 28.740 254 175 4 1058 1306 394 646 9.28e-33 138
Msa0722660 MtrunA17_Chr3g0138211 30.698 215 144 3 1092 1303 1071 1283 1.13e-24 112
Msa0722660 MtrunA17_Chr3g0138211 33.010 206 119 5 451 640 417 619 6.04e-21 100
Msa0722660 MtrunA17_Chr3g0138211 32.057 209 126 3 461 654 1069 1276 5.27e-19 94.0
Msa0722660 MtrunA17_Chr1g0193991 28.452 239 167 3 1058 1293 387 624 9.35e-33 138
Msa0722660 MtrunA17_Chr1g0193991 27.869 244 171 3 1058 1297 1042 1284 1.74e-26 118
Msa0722660 MtrunA17_Chr1g0193991 29.956 227 142 6 430 641 389 613 3.34e-21 100
Msa0722660 MtrunA17_Chr1g0193991 29.646 226 142 4 448 657 1062 1286 7.91e-19 93.2
Msa0722660 MtrunA17_Chr4g0069401 23.979 563 370 14 769 1301 82 616 1.29e-32 138
Msa0722660 MtrunA17_Chr4g0069401 22.686 551 367 17 783 1302 756 1278 3.04e-27 120
Msa0722660 MtrunA17_Chr4g0069401 31.801 261 155 4 422 660 1019 1278 3.11e-24 110
Msa0722660 MtrunA17_Chr4g0069401 31.679 262 143 9 409 655 365 605 3.16e-21 100
Msa0722660 MtrunA17_Chr4g0069411 25.408 551 360 16 784 1305 117 645 5.86e-32 135
Msa0722660 MtrunA17_Chr4g0069411 28.112 249 173 4 1058 1302 1048 1294 3.20e-28 124
Msa0722660 MtrunA17_Chr4g0069411 33.624 229 134 4 448 660 1068 1294 9.60e-24 109
Msa0722660 MtrunA17_Chr4g0069411 29.333 300 171 9 360 640 342 619 4.88e-22 103
Msa0722660 MtrunA17_Chr1g0178481 31.364 220 148 1 1058 1274 378 597 8.05e-32 133
Msa0722660 MtrunA17_Chr1g0178481 30.909 220 128 4 448 644 397 615 4.16e-20 96.3
Msa0722660 MtrunA17_Chr4g0039821 23.941 543 365 16 775 1293 93 611 1.42e-30 131
Msa0722660 MtrunA17_Chr4g0039821 24.291 494 323 14 835 1302 810 1278 6.75e-28 122
Msa0722660 MtrunA17_Chr4g0039821 33.333 228 136 4 448 660 1052 1278 2.31e-24 111
Msa0722660 MtrunA17_Chr4g0039821 24.085 519 334 16 154 637 103 596 1.04e-21 102
Msa0722660 MtrunA17_Chr6g0474071 31.330 233 154 3 1058 1285 211 442 3.71e-30 125
Msa0722660 MtrunA17_Chr6g0474071 31.429 245 149 4 425 653 210 451 3.65e-22 101
Msa0722660 MtrunA17_Chr6g0451881 27.273 297 197 6 1012 1299 964 1250 4.63e-30 129
Msa0722660 MtrunA17_Chr6g0451881 23.826 596 389 21 738 1303 47 607 9.21e-30 129
Msa0722660 MtrunA17_Chr6g0452111 24.542 546 365 17 781 1302 91 613 5.25e-30 129
Msa0722660 MtrunA17_Chr6g0452111 24.289 457 280 13 877 1298 836 1261 6.34e-29 126
Msa0722660 MtrunA17_Chr6g0452111 32.857 210 122 4 448 641 386 592 6.21e-23 106
Msa0722660 MtrunA17_Chr6g0452111 29.339 242 137 5 452 669 1032 1263 1.61e-22 105
Msa0722660 MtrunA17_Chr6g0452041 24.037 545 362 16 775 1293 78 596 6.39e-30 129
Msa0722660 MtrunA17_Chr6g0452041 28.340 247 165 4 1062 1299 1019 1262 7.15e-29 125
Msa0722660 MtrunA17_Chr6g0452041 28.261 276 167 5 408 667 1002 1262 1.34e-23 108
Msa0722660 MtrunA17_Chr6g0452041 32.381 210 123 4 448 641 379 585 2.09e-22 104
Msa0722660 MtrunA17_Chr6g0452071 25.508 443 292 13 877 1299 32 456 7.53e-30 124
Msa0722660 MtrunA17_Chr6g0452071 28.800 250 156 4 411 644 199 442 7.27e-23 103
Msa0722660 MtrunA17_Chr1g0156821 29.583 240 165 3 1058 1294 992 1230 9.08e-30 129
Msa0722660 MtrunA17_Chr1g0156821 32.127 221 134 5 446 651 1010 1229 6.50e-24 109
Msa0722660 MtrunA17_Chr1g0156821 27.273 209 151 1 1075 1282 388 596 1.69e-19 95.5
Msa0722660 MtrunA17_Chr1g0156821 30.811 185 116 5 498 677 453 630 3.17e-15 81.3
Msa0722660 MtrunA17_Chr6g0452141 24.258 573 382 19 749 1293 49 597 1.61e-29 128
Msa0722660 MtrunA17_Chr6g0452141 27.668 253 171 4 1058 1302 1015 1263 4.11e-29 126
Msa0722660 MtrunA17_Chr6g0452141 33.014 209 121 4 448 640 380 585 3.92e-23 107
Msa0722660 MtrunA17_Chr6g0452141 23.540 565 374 16 140 669 721 1262 8.53e-22 102
Msa0722660 MtrunA17_Chr5g0433051 31.356 236 159 3 1058 1292 464 697 2.12e-29 126
Msa0722660 MtrunA17_Chr5g0433051 26.712 292 187 6 380 652 416 699 3.04e-19 94.0
Msa0722660 MtrunA17_Chr6g0451911 23.090 589 404 19 729 1293 33 596 2.28e-29 127
Msa0722660 MtrunA17_Chr6g0451911 25.227 440 298 12 877 1299 832 1257 2.57e-29 127
Msa0722660 MtrunA17_Chr6g0451911 22.007 568 375 13 140 667 718 1257 3.70e-23 107
Msa0722660 MtrunA17_Chr6g0451911 32.381 210 123 4 448 641 379 585 1.16e-22 105
Msa0722660 MtrunA17_Chr3g0128381 24.111 506 341 13 805 1283 134 623 5.20e-29 124
Msa0722660 MtrunA17_Chr3g0128381 30.588 255 142 7 411 641 379 622 8.13e-22 102
Msa0722660 MtrunA17_Chr6g0452171 24.099 444 304 12 877 1302 838 1266 6.80e-29 125
Msa0722660 MtrunA17_Chr6g0452171 30.400 250 169 4 1057 1302 358 606 1.73e-28 124
Msa0722660 MtrunA17_Chr6g0452171 29.091 275 164 5 411 669 1006 1265 1.05e-23 108
Msa0722660 MtrunA17_Chr6g0452171 32.394 213 125 4 445 641 376 585 5.15e-23 107
Msa0722660 MtrunA17_Chr4g0041871 24.941 421 288 9 877 1282 823 1230 2.00e-28 124
Msa0722660 MtrunA17_Chr4g0041871 31.441 229 153 3 1058 1283 341 568 2.11e-27 121
Msa0722660 MtrunA17_Chr4g0041871 26.220 328 209 9 343 646 917 1235 1.41e-21 102
Msa0722660 MtrunA17_Chr4g0041871 33.333 210 121 5 448 641 361 567 2.55e-21 101
Msa0722660 MtrunA17_Chr6g0452061 25.587 426 280 13 877 1282 347 755 2.52e-28 123
Msa0722660 MtrunA17_Chr6g0452061 29.577 213 133 3 448 644 547 758 1.87e-22 104
Msa0722660 MtrunA17_Chr6g0452061 35.088 114 73 1 1190 1302 14 127 2.08e-13 75.1
Msa0722660 MtrunA17_Chr1g0180601 28.261 230 161 3 1058 1284 1053 1281 4.68e-28 123
Msa0722660 MtrunA17_Chr1g0180601 28.571 245 159 3 1051 1293 405 635 5.97e-26 116
Msa0722660 MtrunA17_Chr1g0180601 31.746 252 149 5 411 646 1040 1284 2.22e-24 111
Msa0722660 MtrunA17_Chr1g0180601 28.758 306 190 7 392 674 358 658 3.51e-24 110
Msa0722660 MtrunA17_Chr1g0194001 29.130 230 156 4 1058 1282 145 372 1.20e-26 113
Msa0722660 MtrunA17_Chr1g0194001 30.476 210 130 3 448 642 165 373 3.51e-20 94.4
Msa0722660 MtrunA17_Chr6g0452081 30.918 207 139 3 1057 1262 24 227 2.87e-26 108
Msa0722660 MtrunA17_Chr6g0452081 33.333 180 101 4 458 621 51 227 2.45e-18 85.9
Msa0722660 MtrunA17_Chr5g0433071 30.508 236 161 3 1058 1292 466 699 3.78e-25 112
Msa0722660 MtrunA17_Chr5g0433071 27.193 228 151 3 448 661 484 710 1.69e-16 85.1
Msa0722660 MtrunA17_Chr6g0486841 25.664 226 166 2 1058 1281 1000 1225 6.73e-24 109
Msa0722660 MtrunA17_Chr6g0486841 22.540 559 380 18 769 1300 69 601 1.23e-23 108
Msa0722660 MtrunA17_Chr6g0486841 29.206 315 186 11 355 643 282 585 1.00e-20 99.4
Msa0722660 MtrunA17_Chr6g0486841 28.213 319 188 7 348 650 942 1235 1.04e-20 99.4
Msa0722660 MtrunA17_Chr7g0227391 30.126 239 146 5 430 650 425 660 1.44e-23 107
Msa0722660 MtrunA17_Chr7g0227391 23.651 482 344 12 814 1282 181 651 9.04e-23 105
Msa0722660 MtrunA17_Chr5g0412741 24.007 554 351 18 779 1301 183 697 7.92e-23 105
Msa0722660 MtrunA17_Chr5g0412741 26.198 313 209 5 348 641 374 683 1.31e-19 95.1
Msa0722660 MtrunA17_Chr8g0393151 32.243 214 128 5 1076 1281 35 239 3.45e-22 97.8
Msa0722660 MtrunA17_Chr8g0393151 29.048 210 126 9 448 640 36 239 1.34e-11 66.6
Msa0722660 MtrunA17_Chr8g0366481 25.551 227 166 2 1071 1294 396 622 3.12e-21 100
Msa0722660 MtrunA17_Chr8g0366481 36.129 155 91 4 498 647 467 618 5.68e-19 92.8
Msa0722660 MtrunA17_Chr7g0222781 28.102 274 185 6 1014 1282 1114 1380 3.33e-21 100
Msa0722660 MtrunA17_Chr7g0222781 26.337 243 171 3 1058 1298 404 640 1.26e-20 99.4
Msa0722660 MtrunA17_Chr7g0222781 28.302 265 163 6 416 654 1130 1393 5.19e-19 94.0
Msa0722660 MtrunA17_Chr7g0222781 26.749 243 162 5 461 690 437 676 8.52e-14 76.6
Msa0722660 MtrunA17_Chr1g0212701 21.207 547 369 15 779 1298 123 634 7.01e-21 100
Msa0722660 MtrunA17_Chr1g0212701 28.090 267 179 7 1014 1274 1106 1365 1.18e-20 99.4
Msa0722660 MtrunA17_Chr1g0212701 28.000 300 196 7 370 654 1091 1385 2.07e-19 95.1
Msa0722660 MtrunA17_Chr1g0212701 28.194 227 147 5 461 674 431 654 1.69e-13 75.9
Msa0722660 MtrunA17_Chr3g0128391 26.217 267 137 7 1076 1282 273 539 8.51e-21 98.2
Msa0722660 MtrunA17_Chr3g0128391 38.298 94 57 1 548 641 447 539 3.66e-14 77.0
Msa0722660 MtrunA17_Chr8g0366471 33.019 106 70 1 538 643 9 113 1.51e-15 75.1
Msa0722660 MtrunA17_Chr8g0366471 29.808 104 73 0 1190 1293 19 122 1.46e-11 63.9
Msa0722660 MtrunA17_Chr2g0333921 24.345 267 187 4 2 267 207 459 6.48e-14 75.9
Msa0722660 MtrunA17_Chr4g0014991 37.864 103 63 1 293 394 17 119 1.38e-13 70.1
Msa0722660 MtrunA17_Chr8g0353561 31.126 151 97 2 35 181 25 172 8.26e-13 68.9
Msa0722660 MtrunA17_Chr8g0391641 30.882 136 90 1 35 170 100 231 2.06e-12 68.9
Msa0722660 MtrunA17_Chr3g0130211 27.632 228 145 5 420 635 24 243 9.57e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722660 AT3G13080.1 66.103 1301 437 3 7 1304 214 1513 0.0 1786
Msa0722660 AT3G13080.5 65.854 1271 430 3 7 1274 214 1483 0.0 1736
Msa0722660 AT3G13080.5 24.138 203 140 2 448 637 1286 1487 7.08e-11 67.8
Msa0722660 AT3G13080.2 64.181 1301 437 4 7 1304 214 1488 0.0 1718
Msa0722660 AT3G13100.1 62.897 1291 465 3 14 1304 209 1485 0.0 1657
Msa0722660 AT3G13090.1 61.651 1296 474 4 7 1302 189 1461 0.0 1632
Msa0722660 AT3G13100.2 63.636 1254 442 3 51 1304 1 1240 0.0 1630
Msa0722660 AT1G04120.1 52.987 1289 577 7 35 1301 228 1509 0.0 1367
Msa0722660 AT1G04120.2 52.676 1289 576 8 35 1301 228 1504 0.0 1353
Msa0722660 AT3G60160.3 50.652 1303 622 10 9 1306 179 1465 0.0 1321
Msa0722660 AT3G60160.1 50.652 1303 622 10 9 1306 215 1501 0.0 1320
Msa0722660 AT1G04120.3 51.978 1289 555 9 35 1301 228 1474 0.0 1318
Msa0722660 AT3G60970.1 52.062 1091 479 4 217 1306 1 1048 0.0 1165
Msa0722660 AT3G60160.2 49.102 1169 574 10 9 1172 215 1367 0.0 1143
Msa0722660 AT3G13080.3 61.926 893 336 3 7 896 214 1105 0.0 1132
Msa0722660 AT3G13080.4 61.926 893 336 3 7 896 214 1105 0.0 1132
Msa0722660 AT3G59140.1 43.143 1298 698 11 5 1296 180 1443 0.0 1050
Msa0722660 AT3G62700.1 41.421 1323 727 13 13 1301 229 1537 0.0 1027
Msa0722660 AT3G21250.2 44.253 1279 682 11 27 1296 194 1450 0.0 1014
Msa0722660 AT3G21250.2 25.075 335 210 10 353 657 1130 1453 4.43e-15 81.6
Msa0722660 AT3G21250.4 44.253 1279 682 11 27 1296 200 1456 0.0 1013
Msa0722660 AT3G21250.4 25.075 335 210 10 353 657 1136 1459 4.48e-15 81.6
Msa0722660 AT2G47800.1 41.217 1298 747 10 11 1301 226 1514 0.0 1008
Msa0722660 AT3G21250.1 43.706 1279 678 12 27 1296 194 1439 0.0 992
Msa0722660 AT3G21250.1 25.075 335 210 10 353 657 1119 1442 4.86e-15 81.3
Msa0722660 AT3G21250.5 43.706 1279 678 12 27 1296 200 1445 0.0 992
Msa0722660 AT3G21250.5 25.075 335 210 10 353 657 1125 1448 4.54e-15 81.6
Msa0722660 AT3G21250.6 46.746 1014 519 7 287 1296 38 1034 0.0 885
Msa0722660 AT3G21250.6 25.075 335 210 10 353 657 714 1037 6.76e-15 80.9
Msa0722660 AT3G21250.3 46.746 1014 519 7 287 1296 38 1034 0.0 885
Msa0722660 AT3G21250.3 25.075 335 210 10 353 657 714 1037 6.76e-15 80.9
Msa0722660 AT2G34660.1 35.063 1272 800 9 39 1298 230 1487 0.0 763
Msa0722660 AT2G34660.2 35.063 1272 800 9 39 1298 230 1487 0.0 763
Msa0722660 AT2G34660.3 35.484 1209 752 10 102 1298 8 1200 0.0 739
Msa0722660 AT1G30400.2 34.582 1281 789 13 39 1298 230 1482 0.0 737
Msa0722660 AT1G30400.1 34.582 1281 789 13 39 1298 230 1482 0.0 737
Msa0722660 AT1G30420.1 34.200 1269 788 13 40 1293 232 1468 0.0 708
Msa0722660 AT1G30410.5 33.832 1271 792 15 39 1293 116 1353 0.0 700
Msa0722660 AT1G30410.2 33.832 1271 792 15 39 1293 231 1468 0.0 698
Msa0722660 AT1G30410.6 33.832 1271 792 15 39 1293 231 1468 0.0 698
Msa0722660 AT1G30410.4 33.832 1271 792 15 39 1293 231 1468 0.0 698
Msa0722660 AT1G30410.1 33.752 1274 792 16 39 1293 231 1471 0.0 693
Msa0722660 AT2G07680.6 32.295 1316 802 23 3 1293 72 1323 0.0 667
Msa0722660 AT2G07680.3 32.295 1316 802 23 3 1293 171 1422 0.0 667
Msa0722660 AT2G07680.5 31.991 1316 787 23 3 1293 174 1406 0.0 652
Msa0722660 AT2G07680.1 31.915 1316 782 23 3 1293 174 1400 0.0 650
Msa0722660 AT2G07680.4 31.915 1316 782 23 3 1293 171 1397 0.0 649
Msa0722660 AT1G30410.3 32.021 1168 745 15 39 1190 231 1365 0.0 596
Msa0722660 AT1G30410.3 23.280 189 132 2 1087 1274 643 819 5.15e-12 71.2
Msa0722660 AT2G07680.2 29.630 1053 661 20 3 1033 171 1165 3.01e-137 450
Msa0722660 AT2G07680.2 23.629 237 162 3 1060 1290 580 803 1.56e-13 76.3
Msa0722660 AT1G71330.1 62.620 313 112 2 519 829 1 310 2.89e-128 398
Msa0722660 AT1G30420.2 31.797 868 553 11 40 896 232 1071 1.82e-123 410
Msa0722660 AT1G30420.2 24.339 189 130 2 1087 1274 643 819 6.90e-14 77.4
Msa0722660 AT5G46540.1 25.342 951 590 33 412 1294 344 1242 7.36e-56 213
Msa0722660 AT5G46540.1 30.350 257 152 8 421 657 998 1247 1.39e-20 99.4
Msa0722660 AT2G47000.6 23.438 960 601 31 410 1293 377 1278 1.30e-54 209
Msa0722660 AT2G47000.5 23.438 960 601 31 410 1293 377 1278 1.30e-54 209
Msa0722660 AT2G47000.1 23.438 960 601 31 410 1293 377 1278 1.30e-54 209
Msa0722660 AT3G28380.1 25.220 908 560 28 441 1283 369 1222 6.00e-54 207
Msa0722660 AT3G28380.1 31.905 210 142 1 1086 1294 386 595 1.83e-27 121
Msa0722660 AT3G28380.1 30.973 226 137 5 448 655 1013 1237 1.86e-24 112
Msa0722660 AT1G10680.1 24.009 908 565 25 451 1299 382 1223 6.57e-54 207
Msa0722660 AT1G10680.1 21.429 574 404 17 738 1293 52 596 2.14e-26 118
Msa0722660 AT1G10680.1 30.980 255 151 6 404 638 954 1203 4.33e-25 114
Msa0722660 AT3G28415.2 25.129 971 558 39 403 1282 318 1210 4.47e-53 204
Msa0722660 AT3G28415.2 27.000 300 206 7 999 1293 290 581 4.55e-27 120
Msa0722660 AT3G28415.2 22.393 585 373 17 112 644 658 1213 2.45e-23 108
Msa0722660 AT3G28415.1 25.129 971 558 39 403 1282 310 1202 4.92e-53 204
Msa0722660 AT3G28415.1 27.000 300 206 7 999 1293 282 573 5.10e-27 120
Msa0722660 AT3G28415.1 22.393 585 373 17 112 644 650 1205 2.46e-23 108
Msa0722660 AT3G28360.1 24.188 955 607 32 401 1294 322 1220 3.98e-52 201
Msa0722660 AT3G28390.1 23.961 914 613 23 411 1282 333 1206 6.22e-51 197
Msa0722660 AT3G28390.1 29.707 239 164 3 1058 1293 345 582 5.16e-27 120
Msa0722660 AT3G28390.1 30.088 226 139 4 448 655 998 1222 1.78e-22 105
Msa0722660 AT3G28345.1 24.775 888 562 28 453 1282 382 1221 7.97e-48 187
Msa0722660 AT3G28345.1 28.731 268 185 4 1029 1293 330 594 9.09e-29 125
Msa0722660 AT3G28345.1 28.139 231 149 3 430 644 995 1224 8.85e-22 103
Msa0722660 AT3G28860.1 23.144 916 629 22 430 1299 365 1251 2.34e-47 186
Msa0722660 AT3G28860.1 24.440 536 370 17 775 1293 82 599 4.13e-28 124
Msa0722660 AT1G10680.2 23.759 846 520 25 451 1237 382 1161 3.45e-44 176
Msa0722660 AT1G10680.2 21.254 574 405 16 738 1293 52 596 1.10e-26 119
Msa0722660 AT1G10680.2 32.995 197 112 4 409 589 963 1155 1.69e-17 89.4
Msa0722660 AT2G47000.2 23.049 820 499 30 410 1155 377 1138 5.55e-37 152
Msa0722660 AT2G47000.2 31.381 239 160 3 1058 1293 382 619 2.57e-35 147
Msa0722660 AT2G47000.4 31.381 239 160 3 1058 1293 382 619 1.80e-35 147
Msa0722660 AT2G47000.4 23.430 589 359 22 410 945 377 926 2.03e-26 118
Msa0722660 AT2G47000.3 31.381 239 160 3 1058 1293 382 619 1.91e-35 147
Msa0722660 AT2G47000.3 23.430 589 359 22 410 945 377 926 2.53e-26 117
Msa0722660 AT2G47000.7 31.381 239 160 3 1058 1293 382 619 1.91e-35 147
Msa0722660 AT2G47000.7 23.430 589 359 22 410 945 377 926 2.53e-26 117
Msa0722660 AT4G18050.1 32.218 239 158 3 1058 1293 353 590 4.35e-35 146
Msa0722660 AT4G18050.1 30.417 240 162 3 1058 1293 991 1229 2.41e-29 127
Msa0722660 AT4G18050.2 32.218 239 158 3 1058 1293 363 600 5.25e-35 146
Msa0722660 AT4G18050.2 30.417 240 162 3 1058 1293 1001 1239 2.75e-29 127
Msa0722660 AT5G39040.1 24.803 508 350 13 791 1282 130 621 1.34e-34 142
Msa0722660 AT5G39040.1 29.119 261 169 3 419 664 385 644 1.65e-26 117
Msa0722660 AT3G62150.3 29.707 239 164 3 1058 1293 401 638 1.03e-33 142
Msa0722660 AT3G62150.3 28.333 240 167 3 1058 1293 1050 1288 2.02e-27 121
Msa0722660 AT3G62150.2 29.707 239 164 3 1058 1293 401 638 1.03e-33 142
Msa0722660 AT3G62150.2 28.333 240 167 3 1058 1293 1050 1288 2.02e-27 121
Msa0722660 AT3G62150.1 29.707 239 164 3 1058 1293 401 638 1.03e-33 142
Msa0722660 AT3G62150.1 28.333 240 167 3 1058 1293 1050 1288 2.02e-27 121
Msa0722660 AT1G02530.2 29.707 239 164 3 1058 1293 366 603 1.28e-32 138
Msa0722660 AT1G02530.2 29.537 281 174 8 430 695 368 639 1.70e-21 102
Msa0722660 AT1G02520.1 29.289 239 165 3 1058 1293 379 616 1.90e-32 138
Msa0722660 AT1G02520.1 29.339 242 164 3 1058 1293 1030 1270 9.62e-30 129
Msa0722660 AT1G02520.1 31.148 244 148 5 412 641 368 605 5.53e-24 110
Msa0722660 AT1G02520.1 31.140 228 138 5 448 657 1050 1276 1.72e-20 99.0
Msa0722660 AT1G02520.2 29.289 239 165 3 1058 1293 379 616 1.90e-32 138
Msa0722660 AT1G02520.2 29.339 242 164 3 1058 1293 1030 1270 9.62e-30 129
Msa0722660 AT1G02520.2 31.148 244 148 5 412 641 368 605 5.53e-24 110
Msa0722660 AT1G02520.2 31.140 228 138 5 448 657 1050 1276 1.72e-20 99.0
Msa0722660 AT1G02520.3 29.289 239 165 3 1058 1293 379 616 1.90e-32 138
Msa0722660 AT1G02520.3 29.339 242 164 3 1058 1293 1030 1270 9.62e-30 129
Msa0722660 AT1G02520.3 31.148 244 148 5 412 641 368 605 5.53e-24 110
Msa0722660 AT1G02520.3 31.140 228 138 5 448 657 1050 1276 1.72e-20 99.0
Msa0722660 AT1G02530.1 29.707 239 164 3 1058 1293 366 603 2.15e-32 137
Msa0722660 AT1G02530.1 29.339 242 164 3 1058 1293 1025 1265 7.62e-30 129
Msa0722660 AT1G02530.1 29.537 281 174 8 430 695 368 639 2.28e-21 102
Msa0722660 AT1G02530.1 31.140 228 138 5 448 657 1045 1271 9.41e-21 100
Msa0722660 AT5G58270.1 27.957 372 247 7 930 1292 351 710 2.46e-32 136
Msa0722660 AT5G58270.1 28.899 218 138 4 448 650 495 710 1.67e-18 92.0
Msa0722660 AT4G25450.3 25.775 516 316 12 829 1287 27 532 4.04e-32 133
Msa0722660 AT4G25450.3 28.631 241 155 3 434 658 305 544 3.14e-19 93.6
Msa0722660 AT4G25450.1 25.775 516 316 12 829 1287 196 701 2.90e-31 132
Msa0722660 AT4G25450.1 28.631 241 155 3 434 658 474 713 3.29e-19 94.4
Msa0722660 AT4G01820.2 29.707 239 164 3 1058 1293 346 583 6.93e-31 132
Msa0722660 AT4G01820.2 31.557 244 147 5 412 641 335 572 3.54e-23 107
Msa0722660 AT4G28620.1 31.225 253 167 4 1045 1292 420 670 1.45e-30 130
Msa0722660 AT4G28620.1 29.110 292 179 8 380 650 386 670 1.79e-19 95.1
Msa0722660 AT4G01820.1 29.707 239 164 3 1058 1293 346 583 1.67e-30 131
Msa0722660 AT4G01820.1 26.493 268 181 4 1040 1301 972 1229 3.88e-24 110
Msa0722660 AT4G01820.1 31.557 244 147 5 412 641 335 572 6.28e-23 107
Msa0722660 AT4G01820.1 31.004 229 140 5 448 659 1002 1229 5.59e-17 87.8
Msa0722660 AT4G01830.2 29.289 239 165 3 1058 1293 117 354 1.84e-30 131
Msa0722660 AT4G01830.2 28.992 238 165 2 1059 1293 752 988 9.66e-29 125
Msa0722660 AT4G01830.2 32.653 245 143 8 412 641 106 343 1.07e-23 109
Msa0722660 AT4G01830.2 30.357 224 138 4 448 654 769 991 1.58e-20 99.0
Msa0722660 AT4G01830.1 29.289 239 165 3 1058 1293 351 588 1.96e-30 131
Msa0722660 AT4G01830.1 27.881 269 183 4 1028 1293 962 1222 9.19e-29 125
Msa0722660 AT4G01830.1 32.653 245 143 8 412 641 340 577 9.47e-24 109
Msa0722660 AT4G01830.1 30.357 224 138 4 448 654 1003 1225 1.59e-20 99.4
Msa0722660 AT4G25960.1 22.971 579 393 18 738 1293 88 636 3.57e-30 130
Msa0722660 AT4G25960.1 31.780 236 142 4 424 643 395 627 1.47e-24 112
Msa0722660 AT4G28630.1 31.301 246 163 4 1058 1302 435 675 9.90e-30 127
Msa0722660 AT4G28630.1 27.397 292 184 8 380 650 384 668 1.28e-17 89.0
Msa0722660 AT1G27940.2 30.088 226 157 1 1058 1282 156 381 2.89e-29 127
Msa0722660 AT1G27940.2 27.843 255 178 4 1045 1294 773 1026 5.11e-27 120
Msa0722660 AT1G27940.1 30.088 226 157 1 1058 1282 370 595 3.73e-29 127
Msa0722660 AT1G27940.1 27.843 255 178 4 1045 1294 987 1240 6.97e-27 120
Msa0722660 AT5G03910.1 32.576 264 172 3 1027 1287 366 626 5.19e-29 125
Msa0722660 AT5G03910.1 25.052 483 294 19 207 644 171 630 7.31e-19 92.8
Msa0722660 AT1G28010.1 31.776 214 144 2 1071 1282 383 596 2.07e-28 124
Msa0722660 AT1G28010.1 23.707 464 302 13 838 1282 800 1230 1.55e-25 115
Msa0722660 AT2G36910.1 27.419 248 176 3 1058 1302 1022 1268 1.20e-26 119
Msa0722660 AT2G36910.1 28.750 240 166 4 1058 1293 366 604 2.11e-25 115
Msa0722660 AT2G36910.1 30.120 249 153 5 448 676 386 633 1.13e-24 112
Msa0722660 AT2G36910.1 33.488 215 124 4 448 646 1042 1253 1.67e-23 108
Msa0722660 AT1G70610.2 23.370 552 333 20 791 1301 13 515 4.07e-22 102
Msa0722660 AT1G70610.2 30.603 232 139 5 430 642 274 502 1.13e-19 94.7
Msa0722660 AT1G70610.1 23.037 573 351 20 770 1301 173 696 1.03e-21 102
Msa0722660 AT1G70610.1 30.603 232 139 5 430 642 455 683 1.45e-19 95.5
Msa0722660 AT3G55320.1 21.143 525 371 12 779 1283 137 638 1.99e-21 102
Msa0722660 AT3G55320.1 26.493 268 184 7 1013 1274 1117 1377 2.51e-19 95.5
Msa0722660 AT3G55320.1 26.582 316 212 7 358 654 1083 1397 5.52e-19 94.4
Msa0722660 AT3G55320.1 27.039 233 148 5 461 677 445 671 8.18e-14 77.4
Msa0722660 AT1G67940.1 29.870 231 143 7 1059 1281 28 247 1.44e-20 93.6
Msa0722660 AT2G39480.2 26.667 225 159 2 1071 1295 245 463 5.03e-20 97.4
Msa0722660 AT2G39480.2 27.869 244 169 6 1037 1274 954 1196 1.20e-19 96.3
Msa0722660 AT2G39480.2 27.476 313 207 7 361 654 905 1216 1.02e-18 93.2
Msa0722660 AT2G39480.2 28.230 209 136 3 461 656 263 470 2.53e-14 79.0
Msa0722660 AT2G39480.1 26.667 225 159 2 1071 1295 425 643 5.85e-20 97.4
Msa0722660 AT2G39480.1 28.033 239 165 6 1042 1274 1139 1376 1.46e-19 96.3
Msa0722660 AT2G39480.1 27.157 313 208 7 361 654 1085 1396 1.02e-18 93.6
Msa0722660 AT2G39480.1 28.230 209 136 3 461 656 443 650 3.09e-14 78.6
Msa0722660 AT5G39040.2 23.393 389 268 12 791 1163 130 504 1.05e-16 85.5
Msa0722660 AT4G25450.2 24.480 433 260 12 829 1204 196 618 5.62e-15 80.5
Msa0722660 AT4G39850.3 29.703 202 128 5 1071 1267 458 650 1.00e-11 70.5
Msa0722660 AT4G39850.2 29.703 202 128 5 1071 1267 458 650 1.04e-11 70.5
Msa0722660 AT4G39850.1 29.703 202 128 5 1071 1267 458 650 1.09e-11 70.5
Msa0722660 AT4G39850.4 29.703 202 128 5 1071 1267 458 650 1.09e-11 70.5
Msa0722660 AT4G33460.1 29.167 216 123 9 448 649 60 259 5.71e-11 65.5

Find 283 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGTTCTGCAAGTTTCTT+TGG 0.175151 5_1:-20047877 Msa0722660:CDS
TTTACATCGTATGTATTTAT+TGG 0.183471 5_1:-20048839 Msa0722660:five_prime_UTR
TACAGGATCCCATCTCTTTA+AGG 0.204186 5_1:-20046821 Msa0722660:intron
AATTTCATATCTTTGCAATT+TGG 0.220384 5_1:-20044138 Msa0722660:CDS
TTTGGTGATCAGACCATTAT+TGG 0.223554 5_1:-20046961 Msa0722660:CDS
AGTTTAATTTCTTGTATAAT+TGG 0.228646 5_1:-20047168 Msa0722660:CDS
CTACAGTCTTGTTCAGCTTT+TGG 0.233362 5_1:-20044974 Msa0722660:CDS
TACAGATTGCAAGCAATTAT+TGG 0.234708 5_1:-20045656 Msa0722660:CDS
ACACTAGCAGTGTATAATTT+AGG 0.239649 5_1:+20044406 None:intergenic
TATTGGAAGCCTTACTCTTA+TGG 0.240657 5_1:-20045592 Msa0722660:CDS
TATGGTTGTCTACCTTTCTT+TGG 0.241728 5_1:-20045574 Msa0722660:CDS
GAAGTTTCAAGGTAAGTTAA+TGG 0.244273 5_1:-20047751 Msa0722660:CDS
AGTTCGACTGTACAGCATTT+AGG 0.250774 5_1:+20044162 None:intergenic
AAATCCAGCATTTGAATAAC+TGG 0.260782 5_1:+20048481 None:intergenic
TATCAAAGATTATTCTTCTT+AGG 0.261970 5_1:-20047641 Msa0722660:CDS
AAATGTATTCCTTCTCTCTA+AGG 0.266887 5_1:+20045929 None:intergenic
GTTATAATAATTCACTGTTT+TGG 0.283582 5_1:+20042314 None:intergenic
GGTGAAATACCGAAGATATC+TGG 0.283823 5_1:-20047147 Msa0722660:CDS
CTGAGGGATTATGCTTAGTT+TGG 0.296025 5_1:+20043439 None:intergenic
TTGTCCTTAAGAAGCTTCTT+TGG 0.296852 5_1:+20042574 None:intergenic
TGGCAAGGAATTCTTATATC+TGG 0.303822 5_1:-20048251 Msa0722660:CDS
ATAGAAGAGAATATACTATT+TGG 0.312512 5_1:-20047060 Msa0722660:CDS
GAGTTGAGTTTAAAGTGTTC+TGG 0.315175 5_1:-20045752 Msa0722660:CDS
CGCAGAAGCACTGGATGTTT+AGG 0.320596 5_1:-20048076 Msa0722660:CDS
AGGAGGTCAAGCACTGGTTT+TGG 0.323359 5_1:-20042514 Msa0722660:CDS
GCAATCATTGAAATTGTATC+TGG 0.324832 5_1:+20047423 None:intergenic
TGGACATAACTTGAGCTATA+AGG 0.326598 5_1:+20042334 None:intergenic
TGTCCTTAAGAAGCTTCTTT+GGG 0.330097 5_1:+20042575 None:intergenic
AGTACACAGATGACAAGATT+TGG 0.335509 5_1:-20043364 Msa0722660:CDS
CCTTTGTTCCACAAACCTTC+AGG 0.340442 5_1:+20047121 None:intergenic
ATTTGGAGAGGTTTGTATTC+AGG 0.341225 5_1:-20044012 Msa0722660:CDS
TTTACTGCTGGAGCGAAAAC+TGG 0.345949 5_1:-20043593 Msa0722660:CDS
TCTTCGCTTAGATGATTTGC+AGG 0.346989 5_1:-20047364 Msa0722660:CDS
CGTATGTATTTATTGGCGTT+TGG 0.350540 5_1:-20048832 Msa0722660:five_prime_UTR
GAATGGAGAAAATTGGAGTA+TGG 0.352273 5_1:-20042916 Msa0722660:CDS
AAACCAAGGTTTCTCTAGTT+AGG 0.356842 5_1:-20047398 Msa0722660:CDS
TTCAGGAATTCTTCCCATAT+CGG 0.357689 5_1:+20042227 None:intergenic
ATTAATATTTGTCCTGCAAC+AGG 0.360282 5_1:+20043506 None:intergenic
TATTCTTCTTAGGAAGTTAG+AGG 0.361372 5_1:-20047631 Msa0722660:CDS
TACACTATTTGCCTTCTACT+TGG 0.365158 5_1:-20044344 Msa0722660:CDS
TCTTGAACAAGTTGTCCTTT+TGG 0.366080 5_1:+20045795 None:intergenic
GATCATTCTTGGCCGTCATT+TGG 0.368497 5_1:-20044029 Msa0722660:CDS
GGACATAACTTGAGCTATAA+GGG 0.368526 5_1:+20042335 None:intergenic
AGACTTGTTGAACCTGTTGC+AGG 0.370243 5_1:-20043518 Msa0722660:CDS
CGCTCATATCTATTGCAGTT+TGG 0.371569 5_1:+20045022 None:intergenic
TAGTAGATGGGAATTGTTCT+TGG 0.371844 5_1:-20047290 Msa0722660:CDS
TTTATTGCTGTGGTAACTTT+CGG 0.373493 5_1:-20047540 Msa0722660:CDS
GATTCCCTTCTCTCCAATAA+TGG 0.373727 5_1:+20046948 None:intergenic
GGTTTGTATTCAGGATTTAC+AGG 0.376347 5_1:-20044003 Msa0722660:intron
TGTTTGCTGAATAATATTAT+CGG 0.376713 5_1:+20042800 None:intergenic
CTAAGCATCCCACTTGAATC+AGG 0.377531 5_1:-20047504 Msa0722660:CDS
ACAGCCAACCAGATCATTCT+TGG 0.378231 5_1:-20044040 Msa0722660:CDS
AGTTCCATTGGCACTGTCAT+TGG 0.378909 5_1:+20048367 None:intergenic
ATTTGTGAAAGAAATATAAT+AGG 0.383085 5_1:+20045693 None:intergenic
GGTTCCAACAGGTTGGTGTT+AGG 0.384289 5_1:-20048055 Msa0722660:CDS
CAAATCATAGATGATCAAAA+AGG 0.385486 5_1:-20045840 Msa0722660:CDS
TTACTGAGAATGGAGAAAAT+TGG 0.387665 5_1:-20042923 Msa0722660:CDS
ACTGGCATTGTCGGAAGAAC+AGG 0.392056 5_1:-20043575 Msa0722660:CDS
GATTCCGCGGTTGCTGAAAC+AGG 0.393766 5_1:+20045618 None:intergenic
GGTCTCTTTCTTTGTTATGT+TGG 0.394112 5_1:-20048623 Msa0722660:five_prime_UTR
ATAGCAATTGAAATAGTAGA+TGG 0.394115 5_1:-20047303 Msa0722660:CDS
CACTAGCTTCACCATTCAAA+AGG 0.396757 5_1:+20048555 None:intergenic
ACTTAAGAAAAGCAAGATCT+TGG 0.401678 5_1:-20042859 Msa0722660:CDS
GTAAATCCCCATGCTACATT+TGG 0.410000 5_1:+20044997 None:intergenic
GCAGTTCTTGTTGTAATAGC+TGG 0.410123 5_1:-20045519 Msa0722660:CDS
AGAAGCTATAAATTGTAGTA+AGG 0.412997 5_1:-20042452 Msa0722660:three_prime_UTR
TTCCCCAAAGAAGCTTCTTA+AGG 0.413104 5_1:-20042578 Msa0722660:CDS
TGCTCTAGCAAAGGTGGTAC+AGG 0.413267 5_1:+20045539 None:intergenic
TGATTGCCTAAAGCTATTAG+TGG 0.413313 5_1:+20048428 None:intergenic
AACATCAACATCTCATTGAT+TGG 0.413473 5_1:-20043479 Msa0722660:CDS
CTGTTTCAGGAGTGTTTGCT+TGG 0.414203 5_1:-20046241 Msa0722660:intron
AAATACATCACAACAGGTTA+TGG 0.414336 5_1:-20045729 Msa0722660:CDS
AATAGAAAATGCGCGTCAAT+TGG 0.417940 5_1:-20042359 Msa0722660:three_prime_UTR
AAGCAATTATTGGATGGCTT+TGG 0.418159 5_1:-20045646 Msa0722660:CDS
GAGGTCTTTCTTCAATGAAC+AGG 0.418769 5_1:+20046996 None:intergenic
AGTTCTGCAGTTACTGAGAA+TGG 0.419272 5_1:-20042933 Msa0722660:intron
ATGTGGCTAAAGAAATTTCT+TGG 0.422221 5_1:-20047606 Msa0722660:CDS
GCAACCGCGGAATCTGATAT+TGG 0.422309 5_1:-20045609 Msa0722660:CDS
TTCATTTAGGTCATGAAAGA+AGG 0.424131 5_1:-20046053 Msa0722660:intron
TACCAGGAAAACCAAGTAGA+AGG 0.424506 5_1:+20044333 None:intergenic
CTAGGATCAGCTATTGAACT+TGG 0.429312 5_1:+20044304 None:intergenic
GTCTACCTTTCTTTGGCAGT+TGG 0.430617 5_1:-20045567 Msa0722660:CDS
TTTATACTTCATAGAAGTGT+AGG 0.431356 5_1:-20047849 Msa0722660:CDS
CTGGATGTTTAGGTTCCAAC+AGG 0.431556 5_1:-20048066 Msa0722660:CDS
CTGTCATGGCAGCTGGCATA+TGG 0.433546 5_1:-20044897 Msa0722660:CDS
AAAGCAATGGAAGGTCTTCA+TGG 0.434851 5_1:+20048393 None:intergenic
ACTCAAAACCATGACAATCT+TGG 0.435304 5_1:+20042255 None:intergenic
CGTGAGTTATCACGATTAAC+TGG 0.441551 5_1:-20044556 Msa0722660:CDS
TCAACCAGTTATTCAAATGC+TGG 0.444489 5_1:-20048485 Msa0722660:CDS
AGTGCAGTTGATGCTCATAC+AGG 0.448068 5_1:-20046838 Msa0722660:CDS
ATGAGCATCAACTGCACTAA+AGG 0.449627 5_1:+20046843 None:intergenic
AGTAGATGGGAATTGTTCTT+GGG 0.450964 5_1:-20047289 Msa0722660:CDS
GGAATGAGGGTTGCTGTTTG+TGG 0.451660 5_1:-20047213 Msa0722660:CDS
GTACACAGATGACAAGATTT+GGG 0.453370 5_1:-20043363 Msa0722660:CDS
ATTCCACGTGTGGTAGGAAA+TGG 0.455097 5_1:+20049000 None:intergenic
TGATTGGAATTCATGATTTG+CGG 0.455721 5_1:-20043463 Msa0722660:CDS
TACAATGACATTCTTACATC+GGG 0.458836 5_1:-20046008 Msa0722660:CDS
AGGTGCTTCACTTGGGATAG+AGG 0.459195 5_1:+20044076 None:intergenic
AGTTGGAGTGTGGTAATGTT+AGG 0.464230 5_1:-20048319 Msa0722660:CDS
TTCTGGAAATACATCACAAC+AGG 0.465523 5_1:-20045735 Msa0722660:CDS
TCTGGGATCCTGAAGGTTTG+TGG 0.467463 5_1:-20047129 Msa0722660:CDS
CTTCTCTTGCAGTGATGCCA+TGG 0.469909 5_1:+20047770 None:intergenic
TAGAAGTGTAGGGGCTGCTT+CGG 0.472400 5_1:-20047838 Msa0722660:CDS
AAAGAATTACCTTAAAGAGA+TGG 0.474609 5_1:+20046812 None:intergenic
TTGATTCCTGTCATGGCAGC+TGG 0.474991 5_1:-20044904 Msa0722660:CDS
GGAATGGCTGAGTTTCAGAT+TGG 0.478400 5_1:-20044380 Msa0722660:CDS
TCAAGACGAAGAACGAGAAA+AGG 0.479181 5_1:-20045778 Msa0722660:CDS
ATTACAAGAGGTGCTTCACT+TGG 0.479334 5_1:+20044068 None:intergenic
TCAGCATTCTTACATTCTCA+TGG 0.479724 5_1:-20048457 Msa0722660:CDS
GTTGCTGTTTGTGGTACAGT+TGG 0.480928 5_1:-20047204 Msa0722660:CDS
CTATTAAGAATTCTTCCACT+TGG 0.483385 5_1:+20045417 None:intergenic
AGTGTCTTTCGCAGAAGCAC+TGG 0.483483 5_1:-20048085 Msa0722660:CDS
TACACATGTGCTTCTTATGT+AGG 0.488932 5_1:-20048212 Msa0722660:CDS
GAAGGAAGGATAACACAATC+AGG 0.489114 5_1:-20046035 Msa0722660:CDS
AAGAATTACCTTAAAGAGAT+GGG 0.489748 5_1:+20046813 None:intergenic
GCGGGATTGGCTGTGACATA+CGG 0.491138 5_1:-20044191 Msa0722660:CDS
GATGTCTCAAGTTGCATGGC+AGG 0.491894 5_1:-20044938 Msa0722660:CDS
GGAGCGAAAACTGGCATTGT+CGG 0.492514 5_1:-20043584 Msa0722660:CDS
ATGACTCCACTAATAGCTTT+AGG 0.493811 5_1:-20048434 Msa0722660:CDS
ATCTTGCCACTTTGTATCCA+CGG 0.493895 5_1:+20047081 None:intergenic
TGAGCATCAACTGCACTAAA+GGG 0.494383 5_1:+20046844 None:intergenic
TTATACTTCATAGAAGTGTA+GGG 0.498719 5_1:-20047848 Msa0722660:CDS
GTTTGTGGTACAGTTGGATC+AGG 0.498721 5_1:-20047198 Msa0722660:CDS
GAAGGAAAGCTTGACTCGGC+GGG 0.499293 5_1:-20043212 Msa0722660:intron
TGTACTCTTCGAGCGGGTCG+AGG 0.501383 5_1:+20043381 None:intergenic
GTGAAATACCGAAGATATCT+GGG 0.502244 5_1:-20047146 Msa0722660:CDS
GCAGATATATATCAGCATCT+TGG 0.502369 5_1:+20046875 None:intergenic
CGGGATTGGCTGTGACATAC+GGG 0.502770 5_1:-20044190 Msa0722660:CDS
CAGGATCCAACGATGTTTGA+AGG 0.503920 5_1:-20043419 Msa0722660:CDS
GGTAGACAACCATAAGAGTA+AGG 0.505389 5_1:+20045583 None:intergenic
CAGACCATTATTGGAGAGAA+GGG 0.507610 5_1:-20046952 Msa0722660:CDS
ACAAGTATCAGATCGGCATC+AGG 0.507777 5_1:+20046166 None:intergenic
CAGTTAAGTCCTTAGAGAGA+AGG 0.507987 5_1:-20045938 Msa0722660:CDS
AATGGAGAAAATTGGAGTAT+GGG 0.508338 5_1:-20042915 Msa0722660:CDS
TATTTGGTAGAGAGATGGAT+AGG 0.508435 5_1:-20047044 Msa0722660:CDS
TGCACCTAGTGGTTGTATCA+TGG 0.509476 5_1:-20048966 Msa0722660:five_prime_UTR
CATATGCCAGCTGCCATGAC+AGG 0.514060 5_1:+20044898 None:intergenic
TTCAAAAGGGACTCTTCAAG+AGG 0.524493 5_1:+20048569 None:intergenic
TTCAGGATCCCAGATATCTT+CGG 0.525801 5_1:+20047138 None:intergenic
AACAGGTTATGGAGGAGCTC+TGG 0.527035 5_1:-20045718 Msa0722660:CDS
GATTGCAAGCAATTATTGGA+TGG 0.527924 5_1:-20045652 Msa0722660:CDS
GTGTCAACGATATATGCTAA+AGG 0.530224 5_1:-20048017 Msa0722660:CDS
CTTGCAGTGATGCCATGGGA+TGG 0.531029 5_1:+20047775 None:intergenic
CAAGACGAAGAACGAGAAAA+GGG 0.531965 5_1:-20045777 Msa0722660:CDS
GAATTCTTCCCATATCGGAT+TGG 0.533046 5_1:+20042232 None:intergenic
GATGAAGTGAGGAAGAAAGA+AGG 0.534842 5_1:-20043230 Msa0722660:CDS
TTGTTCTTCTCAACATGGCA+AGG 0.534905 5_1:-20048266 Msa0722660:CDS
TGCTCCGACGTTTATTGCTG+TGG 0.535285 5_1:-20047550 Msa0722660:CDS
GAGCGTTCCAAATGTAGCAT+GGG 0.537631 5_1:-20045004 Msa0722660:CDS
ACCTATCCTTTCAGCATCAA+CGG 0.538040 5_1:+20047932 None:intergenic
GAAGCTATAAATTGTAGTAA+GGG 0.538592 5_1:-20042451 Msa0722660:three_prime_UTR
GACGACACAGTGAAGCCAAA+AGG 0.539158 5_1:-20045810 Msa0722660:CDS
ACCATGACAATCTTGGATCA+TGG 0.539820 5_1:+20042262 None:intergenic
TCAGACCATTATTGGAGAGA+AGG 0.542038 5_1:-20046953 Msa0722660:CDS
TTCAATGATTGCACAAACCA+AGG 0.542119 5_1:-20047412 Msa0722660:CDS
ATTCAAAGATAAAAGAATGA+AGG 0.543072 5_1:-20047727 Msa0722660:CDS
ACAGTCCCTTCAAACATCGT+TGG 0.543559 5_1:+20043413 None:intergenic
TGATAAAACTGTGTCTTCCT+CGG 0.544029 5_1:+20045890 None:intergenic
AATGACGGCCAAGAATGATC+TGG 0.544165 5_1:+20044032 None:intergenic
TAGCAATTGAAATAGTAGAT+GGG 0.544882 5_1:-20047302 Msa0722660:CDS
ATAATGGTCTGATCACCAAA+TGG 0.545729 5_1:+20046964 None:intergenic
TATACTATTTGGTAGAGAGA+TGG 0.545889 5_1:-20047049 Msa0722660:CDS
AAGAATTCTTCCACTTGGTG+TGG 0.545932 5_1:+20045422 None:intergenic
AAATTCCAACTGCCAAAGAA+AGG 0.546449 5_1:+20045562 None:intergenic
CAAGATAGATTCTTCTGTCT+CGG 0.546826 5_1:-20048804 Msa0722660:five_prime_UTR
GATAGTATTGATTCCTGTCA+TGG 0.548405 5_1:-20044911 Msa0722660:CDS
TGATTTGCAGGCCGATGTAG+TGG 0.548721 5_1:-20047352 Msa0722660:CDS
ACTAGCTTCACCATTCAAAA+GGG 0.550128 5_1:+20048556 None:intergenic
GCATCCTAACACCAACCTGT+TGG 0.550870 5_1:+20048051 None:intergenic
GGCAGCTGGCATATGGTACC+AGG 0.551598 5_1:-20044890 Msa0722660:intron
AATCCTAACTAGAGAAACCT+TGG 0.553229 5_1:+20047395 None:intergenic
GATTCTTAAACTTCAAGCAT+GGG 0.555073 5_1:-20047676 Msa0722660:CDS
TCAAACATCGTTGGATCCTG+AGG 0.555940 5_1:+20043422 None:intergenic
GGATTCTTAAACTTCAAGCA+TGG 0.556453 5_1:-20047677 Msa0722660:CDS
GAAGATATTCCACGTGTGGT+AGG 0.557352 5_1:+20048994 None:intergenic
CAAAGACAGTTGGTATGCCT+CGG 0.557369 5_1:-20042891 Msa0722660:CDS
CCTTTCGTGTCAATCAAAAG+TGG 0.558938 5_1:-20047988 Msa0722660:CDS
TAATGACCGTTGATGCTGAA+AGG 0.560489 5_1:-20047938 Msa0722660:CDS
TTCTTGGCCGTCATTTGGAG+AGG 0.562957 5_1:-20044024 Msa0722660:CDS
CAAACTAAGCATAATCCCTC+AGG 0.564325 5_1:-20043438 Msa0722660:CDS
TTTGGCTATGACGTTTGTTG+CGG 0.564382 5_1:-20048120 Msa0722660:CDS
CGTAAAACAAGAGGCAAGTG+AGG 0.564457 5_1:+20043632 None:intergenic
ATGTTTAGGTTCCAACAGGT+TGG 0.568076 5_1:-20048062 Msa0722660:CDS
TCACTGCAAGAGAAGTTTCA+AGG 0.569005 5_1:-20047762 Msa0722660:CDS
TCTACCAATGACAGTGCCAA+TGG 0.570240 5_1:-20048371 Msa0722660:CDS
ATTTGGTAGAGAGATGGATA+GGG 0.572704 5_1:-20047043 Msa0722660:CDS
ATACAATGACATTCTTACAT+CGG 0.578456 5_1:-20046009 Msa0722660:CDS
GGATAGGGAAAAGTATGAGA+AGG 0.578787 5_1:-20047028 Msa0722660:CDS
TTAGGAAGTTAGAGGAGATG+TGG 0.579029 5_1:-20047623 Msa0722660:CDS
CCTGAAGGTTTGTGGAACAA+AGG 0.579348 5_1:-20047121 Msa0722660:CDS
CTGTGATGTCTCAAGTTGCA+TGG 0.580584 5_1:-20044942 Msa0722660:CDS
TTGAACTTGGAAAAGATACC+AGG 0.582088 5_1:+20044317 None:intergenic
GACCTTGGCAAGGTTAATTG+TGG 0.582544 5_1:+20048289 None:intergenic
ATTATACACTGCTAGTGTAG+TGG 0.584733 5_1:-20044401 Msa0722660:CDS
TTTAGGTCATGAAAGAAGGA+AGG 0.585402 5_1:-20046049 Msa0722660:intron
AAGATCTTTCCTGATTCAAG+TGG 0.585420 5_1:+20047495 None:intergenic
TTCTCTTGCAGTGATGCCAT+GGG 0.585769 5_1:+20047771 None:intergenic
TGAGCGTTCCAAATGTAGCA+TGG 0.586651 5_1:-20045005 Msa0722660:CDS
GTATCTGGAAGATTGTAGAC+AGG 0.587060 5_1:+20047438 None:intergenic
AACTAGTTGCAGAGTACACA+AGG 0.587378 5_1:-20042534 Msa0722660:CDS
GAAAGTAGAAACAAGGGCTG+TGG 0.591045 5_1:+20048920 None:intergenic
GCTCTAGATATGTGTCAACT+TGG 0.594125 5_1:-20043254 Msa0722660:CDS
TTCAATCCTCGATAGCGACA+TGG 0.595336 5_1:-20042724 Msa0722660:CDS
TTACAAGAGGTGCTTCACTT+GGG 0.595489 5_1:+20044069 None:intergenic
GTGAGTCCGCGTAAAACAAG+AGG 0.596478 5_1:+20043623 None:intergenic
AAGTCTGAATGTTGCAAGAG+CGG 0.597443 5_1:+20047470 None:intergenic
AATGTTGTATAACTGGTGCT+TGG 0.598439 5_1:+20044527 None:intergenic
TCAAAAGGGACTCTTCAAGA+GGG 0.598446 5_1:+20048570 None:intergenic
CTGTCATTGGTAGAAAGCAA+TGG 0.600257 5_1:+20048380 None:intergenic
TGTTAGGATGCAATCAATGT+TGG 0.601725 5_1:-20048039 Msa0722660:CDS
ACTTGCAGAACAGCCATCCA+TGG 0.601882 5_1:+20047885 None:intergenic
GTCCTTAAGAAGCTTCTTTG+GGG 0.603985 5_1:+20042576 None:intergenic
AGGATCCAACGATGTTTGAA+GGG 0.603988 5_1:-20043418 Msa0722660:CDS
ATGGAGAAAATTGGAGTATG+GGG 0.604735 5_1:-20042914 Msa0722660:CDS
TCATCTGTGTACTCTTCGAG+CGG 0.605721 5_1:+20043374 None:intergenic
CAAAAGCTGAACAAGACTGT+AGG 0.605723 5_1:+20044975 None:intergenic
CAACCATTTCCTACCACACG+TGG 0.606946 5_1:-20049003 Msa0722660:five_prime_UTR
ATCACTCACAAGTATCAGAT+CGG 0.607913 5_1:+20046159 None:intergenic
ATTGTCGGAAGAACAGGAAG+TGG 0.607933 5_1:-20043569 Msa0722660:CDS
AAGGGAATCAATTTGAGTGG+TGG 0.610532 5_1:-20046934 Msa0722660:CDS
AACAAGAACTGCTCTAGCAA+AGG 0.612269 5_1:+20045530 None:intergenic
AGGTCTTGTTCTTCTCAACA+TGG 0.613247 5_1:-20048271 Msa0722660:CDS
CAAACATCGTTGGATCCTGA+GGG 0.613259 5_1:+20043423 None:intergenic
TTGATTGAAGAGCATTGTGG+AGG 0.613586 5_1:+20045488 None:intergenic
ATTATCGGTAGCTGTATCAA+CGG 0.614841 5_1:+20042815 None:intergenic
TGAAGTGATTCTATGAGCAA+TGG 0.615540 5_1:+20042743 None:intergenic
ATCTTCTTCACTGCACCTAG+TGG 0.616019 5_1:-20048977 Msa0722660:five_prime_UTR
CATCTGTGTACTCTTCGAGC+GGG 0.617729 5_1:+20043375 None:intergenic
GTAGAAGGCAAATAGTGTAG+AGG 0.619538 5_1:+20044348 None:intergenic
ACAAAACCATGTCGCTATCG+AGG 0.620404 5_1:+20042718 None:intergenic
TACATCACAACAGGTTATGG+AGG 0.620936 5_1:-20045726 Msa0722660:CDS
AACAAGCTTGAGTTGGAGTG+TGG 0.621339 5_1:-20048329 Msa0722660:CDS
AGTACAAGAAAGTAGAAACA+AGG 0.622294 5_1:+20048913 None:intergenic
CTGAGATTCTAATGAACATG+AGG 0.622456 5_1:-20047698 Msa0722660:CDS
TGTTGAGAAGAACAAGACCT+TGG 0.622810 5_1:+20048274 None:intergenic
GAGTATGGGGCAAAGACAGT+TGG 0.623893 5_1:-20042901 Msa0722660:CDS
ACCATGATCCAAGATTGTCA+TGG 0.625549 5_1:-20042263 Msa0722660:three_prime_UTR
AAGAACTGCTCTAGCAAAGG+TGG 0.627744 5_1:+20045533 None:intergenic
GTGTATGCATGAACCATGGA+TGG 0.629818 5_1:-20047898 Msa0722660:CDS
AACTCCTGTTTCAGCAACCG+CGG 0.630635 5_1:-20045622 Msa0722660:CDS
AGATCTTTCCTGATTCAAGT+GGG 0.631400 5_1:+20047496 None:intergenic
CTTTCGTGTCAATCAAAAGT+GGG 0.632784 5_1:-20047987 Msa0722660:CDS
TATACTTCATAGAAGTGTAG+GGG 0.634176 5_1:-20047847 Msa0722660:CDS
TACACAAGGAGGTCAAGCAC+TGG 0.635516 5_1:-20042520 Msa0722660:CDS
GAGAAGGGAATCAATTTGAG+TGG 0.638340 5_1:-20046937 Msa0722660:CDS
GAAGATATCTGGGATCCTGA+AGG 0.639274 5_1:-20047136 Msa0722660:CDS
ATACAAACCTCTCCAAATGA+CGG 0.640756 5_1:+20044017 None:intergenic
CAACATCACAACTACTGTGG+CGG 0.647369 5_1:+20047803 None:intergenic
GTACAAGAAAGTAGAAACAA+GGG 0.647539 5_1:+20048914 None:intergenic
GCTTCCAATATCAGATTCCG+CGG 0.650024 5_1:+20045605 None:intergenic
AGAAGGAAAGCTTGACTCGG+CGG 0.650266 5_1:-20043213 Msa0722660:CDS
GACCACAATTAACCTTGCCA+AGG 0.652428 5_1:-20048291 Msa0722660:CDS
TGAAGAAGATATTCCACGTG+TGG 0.655074 5_1:+20048990 None:intergenic
CATTTGATTGAAGAGCATTG+TGG 0.655973 5_1:+20045485 None:intergenic
CAATCGCCGTGGATACAAAG+TGG 0.656796 5_1:-20047087 Msa0722660:CDS
GAAAGAAGGAAAGCTTGACT+CGG 0.657130 5_1:-20043216 Msa0722660:CDS
ATACCTCAATGATGAAAACA+AGG 0.657746 5_1:-20048162 Msa0722660:CDS
CATTGGTAGAAAGCAATGGA+AGG 0.660788 5_1:+20048384 None:intergenic
TTCATTGAAGAAAGACCTCG+AGG 0.661291 5_1:-20046992 Msa0722660:CDS
AGAAGAACAAGACCTTGGCA+AGG 0.664034 5_1:+20048279 None:intergenic
ACACTGCTAGTGTAGTGGAA+TGG 0.664944 5_1:-20044396 Msa0722660:CDS
GTTGGTGTATGCATGAACCA+TGG 0.667347 5_1:-20047902 Msa0722660:CDS
CAAAAGGGACTCTTCAAGAG+GGG 0.668839 5_1:+20048571 None:intergenic
TGGAAGCTTCTCCACTACAT+CGG 0.671106 5_1:+20047341 None:intergenic
AGCGTTCCAAATGTAGCATG+GGG 0.672372 5_1:-20045003 Msa0722660:CDS
CACCAAATGGTAAAACCTCG+AGG 0.676036 5_1:+20046977 None:intergenic
ACCGTTGATGCTGAAAGGAT+AGG 0.676514 5_1:-20047933 Msa0722660:CDS
CTTATGTTGCTCAATCGCCG+TGG 0.678662 5_1:-20047098 Msa0722660:CDS
TCTTAAGTAGAACACGTCCG+AGG 0.681293 5_1:+20042874 None:intergenic
TCTTTCACAAATACTCACTG+TGG 0.684267 5_1:-20045682 Msa0722660:CDS
ACGGCCAAGAATGATCTGGT+TGG 0.685985 5_1:+20044036 None:intergenic
TCAAAAGTGGGATACAGCAG+CGG 0.691325 5_1:-20047975 Msa0722660:CDS
GTTACCACAGCAATAAACGT+CGG 0.696626 5_1:+20047546 None:intergenic
AATACTTCGAACCTATAACA+AGG 0.698588 5_1:+20048860 None:intergenic
CACAGATGACAAGATTTGGG+AGG 0.701218 5_1:-20043360 Msa0722660:intron
ATAGCCATGATACAACCACT+AGG 0.702162 5_1:+20048962 None:intergenic
GATGTTGCTAAACCATCCCA+TGG 0.704871 5_1:-20047787 Msa0722660:CDS
GTCAACTTGGTGATGAAGTG+AGG 0.705255 5_1:-20043241 Msa0722660:CDS
TAGCAACATCACAACTACTG+TGG 0.708939 5_1:+20047800 None:intergenic
GCTATATCAGAATTACCTCG+TGG 0.717136 5_1:+20047321 None:intergenic
TGATCCTACAGGGATTATCG+AGG 0.717367 5_1:-20042608 Msa0722660:intron
GTAGTGGAGAAGCTTCCACG+AGG 0.791660 5_1:-20047336 Msa0722660:CDS
TAGTTGCAGAGTACACAAGG+AGG 0.800166 5_1:-20042531 Msa0722660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTATGGAATATTAT+AGG - chr5_1:20047988-20048007 Msa0722660:CDS 10.0%
!!! AAATTATTTTTATTATCCAT+TGG + chr5_1:20048157-20048176 None:intergenic 10.0%
!!! AGTTTAATTTCTTGTATAAT+TGG - chr5_1:20044096-20044115 Msa0722660:CDS 15.0%
!!! CTTTACTTTTTTTTTTTTGA+AGG + chr5_1:20044745-20044764 None:intergenic 15.0%
!! ATTTGTGAAAGAAATATAAT+AGG + chr5_1:20045574-20045593 None:intergenic 15.0%
!! TTAAAAATTAAATACTCACT+AGG + chr5_1:20046981-20047000 None:intergenic 15.0%
!! ATTTATTCTATCCTTAAATA+AGG - chr5_1:20047582-20047601 Msa0722660:CDS 15.0%
!!! TATTTTCTTATCCTTGTTAT+AGG - chr5_1:20042393-20042412 Msa0722660:three_prime_UTR 20.0%
!! TTTACATCGTATGTATTTAT+TGG - chr5_1:20042425-20042444 Msa0722660:three_prime_UTR 20.0%
!!! AAAAATTTAGTTCCTGATAA+AGG - chr5_1:20042604-20042623 Msa0722660:intron 20.0%
!!! ATTGAACAAGATTTTCTATT+AGG + chr5_1:20043084-20043103 None:intergenic 20.0%
!!! TAAAAATGAAGGCTATATTT+TGG - chr5_1:20043126-20043145 Msa0722660:intron 20.0%
!! ATTCAAAGATAAAAGAATGA+AGG - chr5_1:20043537-20043556 Msa0722660:CDS 20.0%
!! TATCAAAGATTATTCTTCTT+AGG - chr5_1:20043623-20043642 Msa0722660:CDS 20.0%
!!! TATGTTTTTCAATGTTGTAT+TGG + chr5_1:20044013-20044032 None:intergenic 20.0%
!!! ATAAATCTTAGAGTTTTTCA+TGG - chr5_1:20044030-20044049 Msa0722660:CDS 20.0%
!! ATAGAAGAGAATATACTATT+TGG - chr5_1:20044204-20044223 Msa0722660:intron 20.0%
!!! ACATAAGGTTTTATCATTAA+TGG + chr5_1:20044544-20044563 None:intergenic 20.0%
!!! AAGTACTTTTAATCTTTTTG+AGG - chr5_1:20044779-20044798 Msa0722660:intron 20.0%
!!! AAAGTTCTAAAAAAACAGTA+AGG + chr5_1:20045177-20045196 None:intergenic 20.0%
!! CTCTTTCTTATAATTCATTT+AGG - chr5_1:20045198-20045217 Msa0722660:intron 20.0%
!!! GAGATTGTTTAAAATTGATT+TGG - chr5_1:20046006-20046025 Msa0722660:CDS 20.0%
!!! TAATTTTACTTTGTTAATGC+AGG - chr5_1:20046209-20046228 Msa0722660:CDS 20.0%
!! TGCATTTAAATATTTGATCA+AGG + chr5_1:20046565-20046584 None:intergenic 20.0%
!! AATTTCATATCTTTGCAATT+TGG - chr5_1:20047126-20047145 Msa0722660:CDS 20.0%
!! AAAATGCAGTAAATTGTTAT+TGG + chr5_1:20047298-20047317 None:intergenic 20.0%
!!! TGAAATTTTATGAGATTTGA+CGG - chr5_1:20047447-20047466 Msa0722660:CDS 20.0%
!!! TTTGTATAACTTGCAAAAAT+AGG + chr5_1:20047964-20047983 None:intergenic 20.0%
!!! TGTTTGCTGAATAATATTAT+CGG + chr5_1:20048467-20048486 None:intergenic 20.0%
!! AGTAAAAAATGGCAAAAAAA+TGG + chr5_1:20048607-20048626 None:intergenic 20.0%
!! TCACATTTATGAGTAAAAAA+TGG + chr5_1:20048618-20048637 None:intergenic 20.0%
!!! GTTATAATAATTCACTGTTT+TGG + chr5_1:20048953-20048972 None:intergenic 20.0%
! TTGGAAAATGAAGCTAATTA+GGG + chr5_1:20042578-20042597 None:intergenic 25.0%
! ATTGGAAAATGAAGCTAATT+AGG + chr5_1:20042579-20042598 None:intergenic 25.0%
!!! GAACTAAATTTTTTGTGGAT+TGG + chr5_1:20042597-20042616 None:intergenic 25.0%
!!! ATCAGGAACTAAATTTTTTG+TGG + chr5_1:20042602-20042621 None:intergenic 25.0%
! AAAAGTTGAAAAAGTTCCAT+TGG + chr5_1:20042912-20042931 None:intergenic 25.0%
!! ACAAGATTTTCTATTAGGTA+TGG + chr5_1:20043079-20043098 None:intergenic 25.0%
! GAAAACAAGGTTAAAAATGA+AGG - chr5_1:20043115-20043134 Msa0722660:intron 25.0%
!! TTTATACTTCATAGAAGTGT+AGG - chr5_1:20043415-20043434 Msa0722660:CDS 25.0%
!! TTATACTTCATAGAAGTGTA+GGG - chr5_1:20043416-20043435 Msa0722660:CDS 25.0%
! ATAGCAATTGAAATAGTAGA+TGG - chr5_1:20043961-20043980 Msa0722660:intron 25.0%
! TAGCAATTGAAATAGTAGAT+GGG - chr5_1:20043962-20043981 Msa0722660:intron 25.0%
! AAGAATTACCTTAAAGAGAT+GGG + chr5_1:20044454-20044473 None:intergenic 25.0%
! AAAGAATTACCTTAAAGAGA+TGG + chr5_1:20044455-20044474 None:intergenic 25.0%
!! TTTTTCATGACGAAGTAATT+TGG - chr5_1:20044511-20044530 Msa0722660:CDS 25.0%
! CCAAATCTTTGATGTTATAA+CGG + chr5_1:20044890-20044909 None:intergenic 25.0%
! TGAAGTATATCATATATCAC+AGG + chr5_1:20044925-20044944 None:intergenic 25.0%
!!! TAATTTTGTTGTGCATAAGA+TGG - chr5_1:20044965-20044984 Msa0722660:CDS 25.0%
! ATACAATGACATTCTTACAT+CGG - chr5_1:20045255-20045274 Msa0722660:intron 25.0%
! CAAATCATAGATGATCAAAA+AGG - chr5_1:20045424-20045443 Msa0722660:CDS 25.0%
!!! AACCATTGATTTAAATCACA+CGG + chr5_1:20045986-20046005 None:intergenic 25.0%
! TTCTATTCAATATGCTAAGT+TGG + chr5_1:20046167-20046186 None:intergenic 25.0%
!!! ATCATATTAAGTGTCGTTTA+AGG - chr5_1:20046407-20046426 Msa0722660:intron 25.0%
! TAAAGAACACTATATTAGTG+AGG - chr5_1:20046515-20046534 Msa0722660:intron 25.0%
! TAGCAAGTTAGCATATATAA+CGG + chr5_1:20046640-20046659 None:intergenic 25.0%
! TCAGAAAAATGTTGTATAAC+TGG + chr5_1:20046747-20046766 None:intergenic 25.0%
!!! CATTTTTCTGAAACAATTTC+TGG - chr5_1:20046756-20046775 Msa0722660:intron 25.0%
!! ATACAACTTCATTCTTTTTC+AGG - chr5_1:20047046-20047065 Msa0722660:CDS 25.0%
! ACATGAAAATGAGAATCATT+AGG - chr5_1:20047407-20047426 Msa0722660:CDS 25.0%
! CTTGTAAACAATGTTTCATT+TGG - chr5_1:20047523-20047542 Msa0722660:CDS 25.0%
! GTATATTTACTTACAAGTCT+CGG - chr5_1:20047549-20047568 Msa0722660:CDS 25.0%
! TATATTTACTTACAAGTCTC+GGG - chr5_1:20047550-20047569 Msa0722660:CDS 25.0%
!!! TTCACATAATGCCTTATTTA+AGG + chr5_1:20047596-20047615 None:intergenic 25.0%
!! ATAACTTGCAAAAATAGGAT+CGG + chr5_1:20047959-20047978 None:intergenic 25.0%
! AACAATGGTTAATATTCCAA+TGG - chr5_1:20048138-20048157 Msa0722660:CDS 25.0%
! AGAAGCTATAAATTGTAGTA+AGG - chr5_1:20048812-20048831 Msa0722660:five_prime_UTR 25.0%
! GAAGCTATAAATTGTAGTAA+GGG - chr5_1:20048813-20048832 Msa0722660:five_prime_UTR 25.0%
GTACAAGAAAGTAGAAACAA+GGG + chr5_1:20042353-20042372 None:intergenic 30.0%
AGTACAAGAAAGTAGAAACA+AGG + chr5_1:20042354-20042373 None:intergenic 30.0%
AATACTTCGAACCTATAACA+AGG + chr5_1:20042407-20042426 None:intergenic 30.0%
!! AACTTTTGACCACTTGTTAA+AGG - chr5_1:20042517-20042536 Msa0722660:CDS 30.0%
ACATGAATACCTTTAACAAG+TGG + chr5_1:20042529-20042548 None:intergenic 30.0%
TGGAAAATGAAGCTAATTAG+GGG + chr5_1:20042577-20042596 None:intergenic 30.0%
TAATAGAGGAAACCTTTATC+AGG + chr5_1:20042619-20042638 None:intergenic 30.0%
ATAAAGGTTTCCTCTATTAC+AGG - chr5_1:20042620-20042639 Msa0722660:intron 30.0%
AAATCCAGCATTTGAATAAC+TGG + chr5_1:20042786-20042805 None:intergenic 30.0%
!! TTTTAGAAACAAGCTTGAGT+TGG - chr5_1:20042928-20042947 Msa0722660:intron 30.0%
ATACCTCAATGATGAAAACA+AGG - chr5_1:20043102-20043121 Msa0722660:intron 30.0%
!!! TAACCTTGTTTTCATCATTG+AGG + chr5_1:20043108-20043127 None:intergenic 30.0%
! AAAGGATAGGTGAATTTTGT+TGG - chr5_1:20043344-20043363 Msa0722660:intron 30.0%
! TATACTTCATAGAAGTGTAG+GGG - chr5_1:20043417-20043436 Msa0722660:CDS 30.0%
GAAGTTTCAAGGTAAGTTAA+TGG - chr5_1:20043513-20043532 Msa0722660:CDS 30.0%
GATTCTTAAACTTCAAGCAT+GGG - chr5_1:20043588-20043607 Msa0722660:CDS 30.0%
TATTCTTCTTAGGAAGTTAG+AGG - chr5_1:20043633-20043652 Msa0722660:CDS 30.0%
ATGTGGCTAAAGAAATTTCT+TGG - chr5_1:20043658-20043677 Msa0722660:intron 30.0%
TTTATTGCTGTGGTAACTTT+CGG - chr5_1:20043724-20043743 Msa0722660:intron 30.0%
GCAATCATTGAAATTGTATC+TGG + chr5_1:20043844-20043863 None:intergenic 30.0%
! TTAGAGTTTTTCATGGAATG+AGG - chr5_1:20044037-20044056 Msa0722660:CDS 30.0%
! TAGAGTTTTTCATGGAATGA+GGG - chr5_1:20044038-20044057 Msa0722660:CDS 30.0%
TATACTATTTGGTAGAGAGA+TGG - chr5_1:20044215-20044234 Msa0722660:intron 30.0%
TTAGTTAGTAAATTCTAGCC+AGG + chr5_1:20044625-20044644 None:intergenic 30.0%
TTTGTGATGAGAAACTTTCA+TGG - chr5_1:20044827-20044846 Msa0722660:intron 30.0%
CCGTTATAACATCAAAGATT+TGG - chr5_1:20044887-20044906 Msa0722660:intron 30.0%
ATTAACTTCTGTACTGTTTC+AGG - chr5_1:20045010-20045029 Msa0722660:CDS 30.0%
!!! TCACTGTTTTTGTTTTCAAC+AGG + chr5_1:20045049-20045068 None:intergenic 30.0%
TTCATTTAGGTCATGAAAGA+AGG - chr5_1:20045211-20045230 Msa0722660:intron 30.0%
TACAATGACATTCTTACATC+GGG - chr5_1:20045256-20045275 Msa0722660:intron 30.0%
! ACAGATTTTATGGAACTTGT+AGG - chr5_1:20045280-20045299 Msa0722660:intron 30.0%
AAATGTATTCCTTCTCTCTA+AGG + chr5_1:20045338-20045357 None:intergenic 30.0%
TAAAAAATCGAGTATTACCG+AGG - chr5_1:20045357-20045376 Msa0722660:intron 30.0%
AAATACATCACAACAGGTTA+TGG - chr5_1:20045535-20045554 Msa0722660:CDS 30.0%
TACAGATTGCAAGCAATTAT+TGG - chr5_1:20045608-20045627 Msa0722660:CDS 30.0%
CTATTAAGAATTCTTCCACT+TGG + chr5_1:20045850-20045869 None:intergenic 30.0%
TGTCACAACATATTCTTTAC+TGG - chr5_1:20045874-20045893 Msa0722660:CDS 30.0%
!!! AATTTTTTACCTCATCACAG+TGG - chr5_1:20045914-20045933 Msa0722660:CDS 30.0%
AACCGTGTGATTTAAATCAA+TGG - chr5_1:20045981-20046000 Msa0722660:CDS 30.0%
ACACTAGCAGTGTATAATTT+AGG + chr5_1:20046861-20046880 None:intergenic 30.0%
!!! TCATTCTTTTTCAGGTATTG+CGG - chr5_1:20047054-20047073 Msa0722660:CDS 30.0%
! TGCAGTAAATTGTTATTGGA+CGG + chr5_1:20047294-20047313 None:intergenic 30.0%
AATAAGCACTTACTATGCAA+TGG - chr5_1:20047483-20047502 Msa0722660:CDS 30.0%
ATATTTACTTACAAGTCTCG+GGG - chr5_1:20047551-20047570 Msa0722660:CDS 30.0%
! AATAAGGCATTATGTGAAAC+AGG - chr5_1:20047598-20047617 Msa0722660:CDS 30.0%
ATTAATATTTGTCCTGCAAC+AGG + chr5_1:20047761-20047780 None:intergenic 30.0%
AACATCAACATCTCATTGAT+TGG - chr5_1:20047785-20047804 Msa0722660:CDS 30.0%
TGATTGGAATTCATGATTTG+CGG - chr5_1:20047801-20047820 Msa0722660:CDS 30.0%
TCACTGTACATTTACAACAA+TGG - chr5_1:20048123-20048142 Msa0722660:CDS 30.0%
CTTAATCGTCACTTAATACT+GGG - chr5_1:20048240-20048259 Msa0722660:CDS 30.0%
TTACTGAGAATGGAGAAAAT+TGG - chr5_1:20048341-20048360 Msa0722660:CDS 30.0%
AATGGAGAAAATTGGAGTAT+GGG - chr5_1:20048349-20048368 Msa0722660:CDS 30.0%
ACTTAAGAAAAGCAAGATCT+TGG - chr5_1:20048405-20048424 Msa0722660:CDS 30.0%
AAAATGGAAAAAGTAGAGAC+AGG + chr5_1:20048591-20048610 None:intergenic 30.0%
CGTATGTATTTATTGGCGTT+TGG - chr5_1:20042432-20042451 Msa0722660:three_prime_UTR 35.0%
CAAGATAGATTCTTCTGTCT+CGG - chr5_1:20042460-20042479 Msa0722660:three_prime_UTR 35.0%
AAGAAAGAGACCTGTAATAG+AGG + chr5_1:20042633-20042652 None:intergenic 35.0%
! GGTCTCTTTCTTTGTTATGT+TGG - chr5_1:20042641-20042660 Msa0722660:intron 35.0%
! ACTAGCTTCACCATTCAAAA+GGG + chr5_1:20042711-20042730 None:intergenic 35.0%
TCAACCAGTTATTCAAATGC+TGG - chr5_1:20042779-20042798 Msa0722660:CDS 35.0%
TCAGCATTCTTACATTCTCA+TGG - chr5_1:20042807-20042826 Msa0722660:CDS 35.0%
ATGACTCCACTAATAGCTTT+AGG - chr5_1:20042830-20042849 Msa0722660:CDS 35.0%
TGATTGCCTAAAGCTATTAG+TGG + chr5_1:20042839-20042858 None:intergenic 35.0%
TGGCAAGGAATTCTTATATC+TGG - chr5_1:20043013-20043032 Msa0722660:intron 35.0%
TACACATGTGCTTCTTATGT+AGG - chr5_1:20043052-20043071 Msa0722660:intron 35.0%
TGTTAGGATGCAATCAATGT+TGG - chr5_1:20043225-20043244 Msa0722660:CDS 35.0%
GTGTCAACGATATATGCTAA+AGG - chr5_1:20043247-20043266 Msa0722660:CDS 35.0%
!! CACTTTTGATTGACACGAAA+GGG + chr5_1:20043278-20043297 None:intergenic 35.0%
CTTTCGTGTCAATCAAAAGT+GGG - chr5_1:20043277-20043296 Msa0722660:intron 35.0%
CTGAGATTCTAATGAACATG+AGG - chr5_1:20043566-20043585 Msa0722660:CDS 35.0%
GGATTCTTAAACTTCAAGCA+TGG - chr5_1:20043587-20043606 Msa0722660:CDS 35.0%
AGATCTTTCCTGATTCAAGT+GGG + chr5_1:20043771-20043790 None:intergenic 35.0%
AAGATCTTTCCTGATTCAAG+TGG + chr5_1:20043772-20043791 None:intergenic 35.0%
TTCAATGATTGCACAAACCA+AGG - chr5_1:20043852-20043871 Msa0722660:intron 35.0%
AAACCAAGGTTTCTCTAGTT+AGG - chr5_1:20043866-20043885 Msa0722660:intron 35.0%
AATCCTAACTAGAGAAACCT+TGG + chr5_1:20043872-20043891 None:intergenic 35.0%
TAGTAGATGGGAATTGTTCT+TGG - chr5_1:20043974-20043993 Msa0722660:intron 35.0%
AGTAGATGGGAATTGTTCTT+GGG - chr5_1:20043975-20043994 Msa0722660:intron 35.0%
GTGAAATACCGAAGATATCT+GGG - chr5_1:20044118-20044137 Msa0722660:CDS 35.0%
TATTTGGTAGAGAGATGGAT+AGG - chr5_1:20044220-20044239 Msa0722660:intron 35.0%
ATTTGGTAGAGAGATGGATA+GGG - chr5_1:20044221-20044240 Msa0722660:intron 35.0%
ATAATGGTCTGATCACCAAA+TGG + chr5_1:20044303-20044322 None:intergenic 35.0%
! TTTGGTGATCAGACCATTAT+TGG - chr5_1:20044303-20044322 Msa0722660:intron 35.0%
GCAGATATATATCAGCATCT+TGG + chr5_1:20044392-20044411 None:intergenic 35.0%
CTACTGTTATCAGTACAATC+TGG - chr5_1:20044483-20044502 Msa0722660:CDS 35.0%
AAAACCTTATGTTGTTCCCA+AGG - chr5_1:20044552-20044571 Msa0722660:CDS 35.0%
ATTTAAACCTCCAGTTCCTT+GGG + chr5_1:20044658-20044677 None:intergenic 35.0%
TATTTAAACCTCCAGTTCCT+TGG + chr5_1:20044659-20044678 None:intergenic 35.0%
ACAAAGTTAATGACTCCACT+TGG + chr5_1:20044812-20044831 None:intergenic 35.0%
ATGTTATAACGGTATCCATC+TGG + chr5_1:20044879-20044898 None:intergenic 35.0%
ATCACTCACAAGTATCAGAT+CGG + chr5_1:20045108-20045127 None:intergenic 35.0%
TTTAGGTCATGAAAGAAGGA+AGG - chr5_1:20045215-20045234 Msa0722660:intron 35.0%
! TACATCGGGAACAGATTTTA+TGG - chr5_1:20045270-20045289 Msa0722660:intron 35.0%
TGATAAAACTGTGTCTTCCT+CGG + chr5_1:20045377-20045396 None:intergenic 35.0%
! TCTTGAACAAGTTGTCCTTT+TGG + chr5_1:20045472-20045491 None:intergenic 35.0%
! GAGTTGAGTTTAAAGTGTTC+TGG - chr5_1:20045512-20045531 Msa0722660:CDS 35.0%
! TTCTGGAAATACATCACAAC+AGG - chr5_1:20045529-20045548 Msa0722660:CDS 35.0%
TCTTTCACAAATACTCACTG+TGG - chr5_1:20045582-20045601 Msa0722660:CDS 35.0%
GATTGCAAGCAATTATTGGA+TGG - chr5_1:20045612-20045631 Msa0722660:CDS 35.0%
AAGCAATTATTGGATGGCTT+TGG - chr5_1:20045618-20045637 Msa0722660:CDS 35.0%
TATTGGAAGCCTTACTCTTA+TGG - chr5_1:20045672-20045691 Msa0722660:CDS 35.0%
TATGGTTGTCTACCTTTCTT+TGG - chr5_1:20045690-20045709 Msa0722660:CDS 35.0%
AAATTCCAACTGCCAAAGAA+AGG + chr5_1:20045705-20045724 None:intergenic 35.0%
!! CATTTGATTGAAGAGCATTG+TGG + chr5_1:20045782-20045801 None:intergenic 35.0%
AATATGTTTCCACTGTGATG+AGG + chr5_1:20045926-20045945 None:intergenic 35.0%
CAGTGGAAACATATTCATTG+CGG - chr5_1:20045931-20045950 Msa0722660:CDS 35.0%
GTTTCACGCGAAGTATAAAT+CGG + chr5_1:20046071-20046090 None:intergenic 35.0%
!!! TACAGTCTTGTTCAGCTTTT+GGG - chr5_1:20046291-20046310 Msa0722660:intron 35.0%
!! GATAGTATTGATTCCTGTCA+TGG - chr5_1:20046353-20046372 Msa0722660:intron 35.0%
!! AATATGATACTGAGAGTACC+TGG + chr5_1:20046395-20046414 None:intergenic 35.0%
AATGTTGTATAACTGGTGCT+TGG + chr5_1:20046740-20046759 None:intergenic 35.0%
ATTATACACTGCTAGTGTAG+TGG - chr5_1:20046863-20046882 Msa0722660:CDS 35.0%
TACACTATTTGCCTTCTACT+TGG - chr5_1:20046920-20046939 Msa0722660:CDS 35.0%
TTGAACTTGGAAAAGATACC+AGG + chr5_1:20046950-20046969 None:intergenic 35.0%
!!! CATTCTTTTTCAGGTATTGC+GGG - chr5_1:20047055-20047074 Msa0722660:CDS 35.0%
! TGGCTGTCTTTTATTACAAG+AGG + chr5_1:20047211-20047230 None:intergenic 35.0%
ATACAAACCTCTCCAAATGA+CGG + chr5_1:20047250-20047269 None:intergenic 35.0%
ATTTGGAGAGGTTTGTATTC+AGG - chr5_1:20047252-20047271 Msa0722660:CDS 35.0%
GGTTTGTATTCAGGATTTAC+AGG - chr5_1:20047261-20047280 Msa0722660:CDS 35.0%
AGTACACAGATGACAAGATT+TGG - chr5_1:20047900-20047919 Msa0722660:CDS 35.0%
GTACACAGATGACAAGATTT+GGG - chr5_1:20047901-20047920 Msa0722660:CDS 35.0%
GCTTAATCGTCACTTAATAC+TGG - chr5_1:20048239-20048258 Msa0722660:CDS 35.0%
GAATGGAGAAAATTGGAGTA+TGG - chr5_1:20048348-20048367 Msa0722660:CDS 35.0%
ATGGAGAAAATTGGAGTATG+GGG - chr5_1:20048350-20048369 Msa0722660:CDS 35.0%
ATTATCGGTAGCTGTATCAA+CGG + chr5_1:20048452-20048471 None:intergenic 35.0%
TGAAGTGATTCTATGAGCAA+TGG + chr5_1:20048524-20048543 None:intergenic 35.0%
!!! ATGGTTTTGTTTCTCAGTGA+AGG - chr5_1:20048559-20048578 Msa0722660:CDS 35.0%
TGTCCTTAAGAAGCTTCTTT+GGG + chr5_1:20048692-20048711 None:intergenic 35.0%
TTGTCCTTAAGAAGCTTCTT+TGG + chr5_1:20048693-20048712 None:intergenic 35.0%
AATAGAAAATGCGCGTCAAT+TGG - chr5_1:20048905-20048924 Msa0722660:five_prime_UTR 35.0%
GGACATAACTTGAGCTATAA+GGG + chr5_1:20048932-20048951 None:intergenic 35.0%
TGGACATAACTTGAGCTATA+AGG + chr5_1:20048933-20048952 None:intergenic 35.0%
ACTCAAAACCATGACAATCT+TGG + chr5_1:20049012-20049031 None:intergenic 35.0%
TGAAGAAGATATTCCACGTG+TGG + chr5_1:20042277-20042296 None:intergenic 40.0%
ATAGCCATGATACAACCACT+AGG + chr5_1:20042305-20042324 None:intergenic 40.0%
TCAAAAGGGACTCTTCAAGA+GGG + chr5_1:20042697-20042716 None:intergenic 40.0%
TTCAAAAGGGACTCTTCAAG+AGG + chr5_1:20042698-20042717 None:intergenic 40.0%
! CTTGAAGAGTCCCTTTTGAA+TGG - chr5_1:20042698-20042717 Msa0722660:intron 40.0%
! CACTAGCTTCACCATTCAAA+AGG + chr5_1:20042712-20042731 None:intergenic 40.0%
AAAGCAATGGAAGGTCTTCA+TGG + chr5_1:20042874-20042893 None:intergenic 40.0%
CATTGGTAGAAAGCAATGGA+AGG + chr5_1:20042883-20042902 None:intergenic 40.0%
CTGTCATTGGTAGAAAGCAA+TGG + chr5_1:20042887-20042906 None:intergenic 40.0%
! AGTTGGAGTGTGGTAATGTT+AGG - chr5_1:20042945-20042964 Msa0722660:intron 40.0%
TGTTGAGAAGAACAAGACCT+TGG + chr5_1:20042993-20043012 None:intergenic 40.0%
!! AGGTCTTGTTCTTCTCAACA+TGG - chr5_1:20042993-20043012 Msa0722660:intron 40.0%
TTGTTCTTCTCAACATGGCA+AGG - chr5_1:20042998-20043017 Msa0722660:intron 40.0%
! TTTGGCTATGACGTTTGTTG+CGG - chr5_1:20043144-20043163 Msa0722660:intron 40.0%
! ATGTTTAGGTTCCAACAGGT+TGG - chr5_1:20043202-20043221 Msa0722660:intron 40.0%
!! CCACTTTTGATTGACACGAA+AGG + chr5_1:20043279-20043298 None:intergenic 40.0%
CCTTTCGTGTCAATCAAAAG+TGG - chr5_1:20043276-20043295 Msa0722660:intron 40.0%
TAATGACCGTTGATGCTGAA+AGG - chr5_1:20043326-20043345 Msa0722660:intron 40.0%
ACCTATCCTTTCAGCATCAA+CGG + chr5_1:20043335-20043354 None:intergenic 40.0%
TAGCAACATCACAACTACTG+TGG + chr5_1:20043467-20043486 None:intergenic 40.0%
TCACTGCAAGAGAAGTTTCA+AGG - chr5_1:20043502-20043521 Msa0722660:CDS 40.0%
TTAGGAAGTTAGAGGAGATG+TGG - chr5_1:20043641-20043660 Msa0722660:CDS 40.0%
GTTACCACAGCAATAAACGT+CGG + chr5_1:20043721-20043740 None:intergenic 40.0%
AAGTCTGAATGTTGCAAGAG+CGG + chr5_1:20043797-20043816 None:intergenic 40.0%
GTATCTGGAAGATTGTAGAC+AGG + chr5_1:20043829-20043848 None:intergenic 40.0%
! TCTTCGCTTAGATGATTTGC+AGG - chr5_1:20043900-20043919 Msa0722660:intron 40.0%
GCTATATCAGAATTACCTCG+TGG + chr5_1:20043946-20043965 None:intergenic 40.0%
GGTGAAATACCGAAGATATC+TGG - chr5_1:20044117-20044136 Msa0722660:CDS 40.0%
TTCAGGATCCCAGATATCTT+CGG + chr5_1:20044129-20044148 None:intergenic 40.0%
!! ATCTTGCCACTTTGTATCCA+CGG + chr5_1:20044186-20044205 None:intergenic 40.0%
! GGATAGGGAAAAGTATGAGA+AGG - chr5_1:20044236-20044255 Msa0722660:intron 40.0%
GAGGTCTTTCTTCAATGAAC+AGG + chr5_1:20044271-20044290 None:intergenic 40.0%
TTCATTGAAGAAAGACCTCG+AGG - chr5_1:20044272-20044291 Msa0722660:intron 40.0%
TCAGACCATTATTGGAGAGA+AGG - chr5_1:20044311-20044330 Msa0722660:CDS 40.0%
CAGACCATTATTGGAGAGAA+GGG - chr5_1:20044312-20044331 Msa0722660:CDS 40.0%
GATTCCCTTCTCTCCAATAA+TGG + chr5_1:20044319-20044338 None:intergenic 40.0%
GAGAAGGGAATCAATTTGAG+TGG - chr5_1:20044327-20044346 Msa0722660:CDS 40.0%
AAGGGAATCAATTTGAGTGG+TGG - chr5_1:20044330-20044349 Msa0722660:CDS 40.0%
TGAGCATCAACTGCACTAAA+GGG + chr5_1:20044423-20044442 None:intergenic 40.0%
ATGAGCATCAACTGCACTAA+AGG + chr5_1:20044424-20044443 None:intergenic 40.0%
TACAGGATCCCATCTCTTTA+AGG - chr5_1:20044443-20044462 Msa0722660:CDS 40.0%
GAGAACCTGAGTTTGTATTC+TGG - chr5_1:20044588-20044607 Msa0722660:intron 40.0%
ACCTGAGTTTGTATTCTGGT+TGG - chr5_1:20044592-20044611 Msa0722660:intron 40.0%
TCCAACCAGAATACAAACTC+AGG + chr5_1:20044596-20044615 None:intergenic 40.0%
! ATTCTGGTTGGAACATTTCC+TGG - chr5_1:20044604-20044623 Msa0722660:intron 40.0%
TTTAAACCTCCAGTTCCTTG+GGG + chr5_1:20044657-20044676 None:intergenic 40.0%
!!! TTTTGAGGTGTTTCTCCAAG+TGG - chr5_1:20044794-20044813 Msa0722660:intron 40.0%
!! TCTTAGCTCTATTGTCCAGA+TGG - chr5_1:20044861-20044880 Msa0722660:intron 40.0%
GAAGGAAGGATAACACAATC+AGG - chr5_1:20045229-20045248 Msa0722660:intron 40.0%
CAGTTAAGTCCTTAGAGAGA+AGG - chr5_1:20045326-20045345 Msa0722660:intron 40.0%
TCAAGACGAAGAACGAGAAA+AGG - chr5_1:20045486-20045505 Msa0722660:CDS 40.0%
CAAGACGAAGAACGAGAAAA+GGG - chr5_1:20045487-20045506 Msa0722660:CDS 40.0%
TACATCACAACAGGTTATGG+AGG - chr5_1:20045538-20045557 Msa0722660:CDS 40.0%
GGTAGACAACCATAAGAGTA+AGG + chr5_1:20045684-20045703 None:intergenic 40.0%
AACAAGAACTGCTCTAGCAA+AGG + chr5_1:20045737-20045756 None:intergenic 40.0%
! GCAGTTCTTGTTGTAATAGC+TGG - chr5_1:20045745-20045764 Msa0722660:CDS 40.0%
!! TTGATTGAAGAGCATTGTGG+AGG + chr5_1:20045779-20045798 None:intergenic 40.0%
GTGGCATCAAAAAACGACAT+TGG + chr5_1:20045826-20045845 None:intergenic 40.0%
!!! TTTTTTGATGCCACACCAAG+TGG - chr5_1:20045832-20045851 Msa0722660:CDS 40.0%
! AAGAATTCTTCCACTTGGTG+TGG + chr5_1:20045845-20045864 None:intergenic 40.0%
TTGCGGTAAATGCATGACAT+AGG - chr5_1:20045948-20045967 Msa0722660:CDS 40.0%
CGCTCATATCTATTGCAGTT+TGG + chr5_1:20046245-20046264 None:intergenic 40.0%
GTAAATCCCCATGCTACATT+TGG + chr5_1:20046270-20046289 None:intergenic 40.0%
CAAAAGCTGAACAAGACTGT+AGG + chr5_1:20046292-20046311 None:intergenic 40.0%
!!! CTACAGTCTTGTTCAGCTTT+TGG - chr5_1:20046290-20046309 Msa0722660:intron 40.0%
!! CTAACTTGCTAAGTAACCGA+GGG - chr5_1:20046649-20046668 Msa0722660:intron 40.0%
CGTGAGTTATCACGATTAAC+TGG - chr5_1:20046708-20046727 Msa0722660:intron 40.0%
GTAGAAGGCAAATAGTGTAG+AGG + chr5_1:20046919-20046938 None:intergenic 40.0%
TACCAGGAAAACCAAGTAGA+AGG + chr5_1:20046934-20046953 None:intergenic 40.0%
CTAGGATCAGCTATTGAACT+TGG + chr5_1:20046963-20046982 None:intergenic 40.0%
!!! TTTTTCAGGTATTGCGGGAT+TGG - chr5_1:20047060-20047079 Msa0722660:CDS 40.0%
AGTTCGACTGTACAGCATTT+AGG + chr5_1:20047105-20047124 None:intergenic 40.0%
!! TTACAAGAGGTGCTTCACTT+GGG + chr5_1:20047198-20047217 None:intergenic 40.0%
!! ATTACAAGAGGTGCTTCACT+TGG + chr5_1:20047199-20047218 None:intergenic 40.0%
AGCACTTACTATGCAATGGT+TGG - chr5_1:20047487-20047506 Msa0722660:CDS 40.0%
CTGAGGGATTATGCTTAGTT+TGG + chr5_1:20047828-20047847 None:intergenic 40.0%
CAAACTAAGCATAATCCCTC+AGG - chr5_1:20047826-20047845 Msa0722660:CDS 40.0%
AGGATCCAACGATGTTTGAA+GGG - chr5_1:20047846-20047865 Msa0722660:CDS 40.0%
! GCTCTAGATATGTGTCAACT+TGG - chr5_1:20048010-20048029 Msa0722660:CDS 40.0%
GATGAAGTGAGGAAGAAAGA+AGG - chr5_1:20048034-20048053 Msa0722660:CDS 40.0%
GAAAGAAGGAAAGCTTGACT+CGG - chr5_1:20048048-20048067 Msa0722660:CDS 40.0%
AGTTCTGCAGTTACTGAGAA+TGG - chr5_1:20048331-20048350 Msa0722660:CDS 40.0%
TGTCTTCTTACTGATCCTAC+AGG - chr5_1:20048645-20048664 Msa0722660:intron 40.0%
GTCTTCTTACTGATCCTACA+GGG - chr5_1:20048646-20048665 Msa0722660:intron 40.0%
TATTCCTCGATAATCCCTGT+AGG + chr5_1:20048663-20048682 None:intergenic 40.0%
TTCCCCAAAGAAGCTTCTTA+AGG - chr5_1:20048686-20048705 Msa0722660:intron 40.0%
GTCCTTAAGAAGCTTCTTTG+GGG + chr5_1:20048691-20048710 None:intergenic 40.0%
AACTAGTTGCAGAGTACACA+AGG - chr5_1:20048730-20048749 Msa0722660:intron 40.0%
ACCATGATCCAAGATTGTCA+TGG - chr5_1:20049001-20049020 Msa0722660:five_prime_UTR 40.0%
ACCATGACAATCTTGGATCA+TGG + chr5_1:20049005-20049024 None:intergenic 40.0%
!! GTTTTGAGTCCAATCCGATA+TGG - chr5_1:20049023-20049042 Msa0722660:five_prime_UTR 40.0%
ATTCCACGTGTGGTAGGAAA+TGG + chr5_1:20042267-20042286 None:intergenic 45.0%
GAAGATATTCCACGTGTGGT+AGG + chr5_1:20042273-20042292 None:intergenic 45.0%
ATCTTCTTCACTGCACCTAG+TGG - chr5_1:20042287-20042306 Msa0722660:three_prime_UTR 45.0%
TGCACCTAGTGGTTGTATCA+TGG - chr5_1:20042298-20042317 Msa0722660:three_prime_UTR 45.0%
GAAAGTAGAAACAAGGGCTG+TGG + chr5_1:20042347-20042366 None:intergenic 45.0%
! AGCTAATTAGGGGCATGCAT+CGG + chr5_1:20042567-20042586 None:intergenic 45.0%
CAAAAGGGACTCTTCAAGAG+GGG + chr5_1:20042696-20042715 None:intergenic 45.0%
TCTACCAATGACAGTGCCAA+TGG - chr5_1:20042893-20042912 Msa0722660:CDS 45.0%
AGTTCCATTGGCACTGTCAT+TGG + chr5_1:20042900-20042919 None:intergenic 45.0%
!! AACAAGCTTGAGTTGGAGTG+TGG - chr5_1:20042935-20042954 Msa0722660:intron 45.0%
GACCACAATTAACCTTGCCA+AGG - chr5_1:20042973-20042992 Msa0722660:intron 45.0%
GACCTTGGCAAGGTTAATTG+TGG + chr5_1:20042978-20042997 None:intergenic 45.0%
AGAAGAACAAGACCTTGGCA+AGG + chr5_1:20042988-20043007 None:intergenic 45.0%
! CTGGATGTTTAGGTTCCAAC+AGG - chr5_1:20043198-20043217 Msa0722660:intron 45.0%
TCAAAAGTGGGATACAGCAG+CGG - chr5_1:20043289-20043308 Msa0722660:intron 45.0%
ACCGTTGATGCTGAAAGGAT+AGG - chr5_1:20043331-20043350 Msa0722660:intron 45.0%
GTTGGTGTATGCATGAACCA+TGG - chr5_1:20043362-20043381 Msa0722660:CDS 45.0%
GTGTATGCATGAACCATGGA+TGG - chr5_1:20043366-20043385 Msa0722660:CDS 45.0%
GGCTGTTCTGCAAGTTTCTT+TGG - chr5_1:20043387-20043406 Msa0722660:CDS 45.0%
CAACATCACAACTACTGTGG+CGG + chr5_1:20043464-20043483 None:intergenic 45.0%
GATGTTGCTAAACCATCCCA+TGG - chr5_1:20043477-20043496 Msa0722660:CDS 45.0%
TTCTCTTGCAGTGATGCCAT+GGG + chr5_1:20043496-20043515 None:intergenic 45.0%
CTAAGCATCCCACTTGAATC+AGG - chr5_1:20043760-20043779 Msa0722660:intron 45.0%
TGGAAGCTTCTCCACTACAT+CGG + chr5_1:20043926-20043945 None:intergenic 45.0%
!! GTTGCTGTTTGTGGTACAGT+TGG - chr5_1:20044060-20044079 Msa0722660:CDS 45.0%
GTTTGTGGTACAGTTGGATC+AGG - chr5_1:20044066-20044085 Msa0722660:CDS 45.0%
! GAAGATATCTGGGATCCTGA+AGG - chr5_1:20044128-20044147 Msa0722660:CDS 45.0%
CCTTTGTTCCACAAACCTTC+AGG + chr5_1:20044146-20044165 None:intergenic 45.0%
CCTGAAGGTTTGTGGAACAA+AGG - chr5_1:20044143-20044162 Msa0722660:CDS 45.0%
! GACCTCGAGGTTTTACCATT+TGG - chr5_1:20044285-20044304 Msa0722660:intron 45.0%
CACCAAATGGTAAAACCTCG+AGG + chr5_1:20044290-20044309 None:intergenic 45.0%
! AGTGCAGTTGATGCTCATAC+AGG - chr5_1:20044426-20044445 Msa0722660:CDS 45.0%
TCGTCCTTGGGAACAACATA+AGG + chr5_1:20044559-20044578 None:intergenic 45.0%
TTGTTGTGCATAAGATGGCG+AGG - chr5_1:20044970-20044989 Msa0722660:CDS 45.0%
!! CTGTTTCAGGAGTGTTTGCT+TGG - chr5_1:20045023-20045042 Msa0722660:CDS 45.0%
ACAAGTATCAGATCGGCATC+AGG + chr5_1:20045101-20045120 None:intergenic 45.0%
GCTTCCAATATCAGATTCCG+CGG + chr5_1:20045662-20045681 None:intergenic 45.0%
GTCTACCTTTCTTTGGCAGT+TGG - chr5_1:20045697-20045716 Msa0722660:CDS 45.0%
AAGAACTGCTCTAGCAAAGG+TGG + chr5_1:20045734-20045753 None:intergenic 45.0%
ATACTTCGCGTGAAACTGCT+TGG - chr5_1:20046075-20046094 Msa0722660:intron 45.0%
TGAGCGTTCCAAATGTAGCA+TGG - chr5_1:20046259-20046278 Msa0722660:intron 45.0%
GAGCGTTCCAAATGTAGCAT+GGG - chr5_1:20046260-20046279 Msa0722660:intron 45.0%
AGCGTTCCAAATGTAGCATG+GGG - chr5_1:20046261-20046280 Msa0722660:intron 45.0%
! CTGTGATGTCTCAAGTTGCA+TGG - chr5_1:20046322-20046341 Msa0722660:intron 45.0%
!! GCTAACTTGCTAAGTAACCG+AGG - chr5_1:20046648-20046667 Msa0722660:intron 45.0%
GCTGCATATATAGAAGCCCT+CGG + chr5_1:20046668-20046687 None:intergenic 45.0%
! ACACTGCTAGTGTAGTGGAA+TGG - chr5_1:20046868-20046887 Msa0722660:CDS 45.0%
GGAATGGCTGAGTTTCAGAT+TGG - chr5_1:20046884-20046903 Msa0722660:CDS 45.0%
!! TGCCTTCTACTTGGTTTTCC+TGG - chr5_1:20046929-20046948 Msa0722660:CDS 45.0%
ACAGCCAACCAGATCATTCT+TGG - chr5_1:20047224-20047243 Msa0722660:CDS 45.0%
AATGACGGCCAAGAATGATC+TGG + chr5_1:20047235-20047254 None:intergenic 45.0%
GATCATTCTTGGCCGTCATT+TGG - chr5_1:20047235-20047254 Msa0722660:CDS 45.0%
CGTAAAACAAGAGGCAAGTG+AGG + chr5_1:20047635-20047654 None:intergenic 45.0%
!!! CACTTGCCTCTTGTTTTACG+CGG - chr5_1:20047635-20047654 Msa0722660:CDS 45.0%
! CTCACTTGCACTTTTACTGC+TGG - chr5_1:20047659-20047678 Msa0722660:CDS 45.0%
TTTACTGCTGGAGCGAAAAC+TGG - chr5_1:20047671-20047690 Msa0722660:CDS 45.0%
ATTGTCGGAAGAACAGGAAG+TGG - chr5_1:20047695-20047714 Msa0722660:CDS 45.0%
!! AGACTTGTTGAACCTGTTGC+AGG - chr5_1:20047746-20047765 Msa0722660:CDS 45.0%
CAAACATCGTTGGATCCTGA+GGG + chr5_1:20047844-20047863 None:intergenic 45.0%
TCAAACATCGTTGGATCCTG+AGG + chr5_1:20047845-20047864 None:intergenic 45.0%
CAGGATCCAACGATGTTTGA+AGG - chr5_1:20047845-20047864 Msa0722660:CDS 45.0%
ACAGTCCCTTCAAACATCGT+TGG + chr5_1:20047854-20047873 None:intergenic 45.0%
TCATCTGTGTACTCTTCGAG+CGG + chr5_1:20047893-20047912 None:intergenic 45.0%
CACAGATGACAAGATTTGGG+AGG - chr5_1:20047904-20047923 Msa0722660:CDS 45.0%
!! GTCAACTTGGTGATGAAGTG+AGG - chr5_1:20048023-20048042 Msa0722660:CDS 45.0%
! CAAAGACAGTTGGTATGCCT+CGG - chr5_1:20048373-20048392 Msa0722660:CDS 45.0%
TCTTAAGTAGAACACGTCCG+AGG + chr5_1:20048393-20048412 None:intergenic 45.0%
TTCAATCCTCGATAGCGACA+TGG - chr5_1:20048540-20048559 Msa0722660:CDS 45.0%
ACAAAACCATGTCGCTATCG+AGG + chr5_1:20048549-20048568 None:intergenic 45.0%
TGATCCTACAGGGATTATCG+AGG - chr5_1:20048656-20048675 Msa0722660:intron 45.0%
TAGTTGCAGAGTACACAAGG+AGG - chr5_1:20048733-20048752 Msa0722660:intron 45.0%
!!! ATACAAATTAATATATTTTA+TGG - chr5_1:20047977-20047996 Msa0722660:CDS 5.0%
CAACCATTTCCTACCACACG+TGG - chr5_1:20042261-20042280 Msa0722660:three_prime_UTR 50.0%
! AGTGTCTTTCGCAGAAGCAC+TGG - chr5_1:20043179-20043198 Msa0722660:intron 50.0%
!! CGCAGAAGCACTGGATGTTT+AGG - chr5_1:20043188-20043207 Msa0722660:intron 50.0%
!! GGTTCCAACAGGTTGGTGTT+AGG - chr5_1:20043209-20043228 Msa0722660:intron 50.0%
GCATCCTAACACCAACCTGT+TGG + chr5_1:20043216-20043235 None:intergenic 50.0%
ACTTGCAGAACAGCCATCCA+TGG + chr5_1:20043382-20043401 None:intergenic 50.0%
! TAGAAGTGTAGGGGCTGCTT+CGG - chr5_1:20043426-20043445 Msa0722660:CDS 50.0%
CTTCTCTTGCAGTGATGCCA+TGG + chr5_1:20043497-20043516 None:intergenic 50.0%
TGCTCCGACGTTTATTGCTG+TGG - chr5_1:20043714-20043733 Msa0722660:intron 50.0%
! TGATTTGCAGGCCGATGTAG+TGG - chr5_1:20043912-20043931 Msa0722660:intron 50.0%
!! GGAATGAGGGTTGCTGTTTG+TGG - chr5_1:20044051-20044070 Msa0722660:CDS 50.0%
! TCTGGGATCCTGAAGGTTTG+TGG - chr5_1:20044135-20044154 Msa0722660:CDS 50.0%
CTTATGTTGCTCAATCGCCG+TGG - chr5_1:20044166-20044185 Msa0722660:CDS 50.0%
CAATCGCCGTGGATACAAAG+TGG - chr5_1:20044177-20044196 Msa0722660:CDS 50.0%
CTCTCGAACGATTCGTCCTT+GGG + chr5_1:20044571-20044590 None:intergenic 50.0%
TCTCTCGAACGATTCGTCCT+TGG + chr5_1:20044572-20044591 None:intergenic 50.0%
AACTAAACCTCCCTTCCCCA+AGG - chr5_1:20044639-20044658 Msa0722660:intron 50.0%
GACGACACAGTGAAGCCAAA+AGG - chr5_1:20045454-20045473 Msa0722660:CDS 50.0%
AACAGGTTATGGAGGAGCTC+TGG - chr5_1:20045546-20045565 Msa0722660:CDS 50.0%
AACTCCTGTTTCAGCAACCG+CGG - chr5_1:20045642-20045661 Msa0722660:CDS 50.0%
GCAACCGCGGAATCTGATAT+TGG - chr5_1:20045655-20045674 Msa0722660:CDS 50.0%
TGCTCTAGCAAAGGTGGTAC+AGG + chr5_1:20045728-20045747 None:intergenic 50.0%
! GATGTCTCAAGTTGCATGGC+AGG - chr5_1:20046326-20046345 Msa0722660:intron 50.0%
TTGATTCCTGTCATGGCAGC+TGG - chr5_1:20046360-20046379 Msa0722660:intron 50.0%
AGGTGCTTCACTTGGGATAG+AGG + chr5_1:20047191-20047210 None:intergenic 50.0%
ACGGCCAAGAATGATCTGGT+TGG + chr5_1:20047231-20047250 None:intergenic 50.0%
TTCTTGGCCGTCATTTGGAG+AGG - chr5_1:20047240-20047259 Msa0722660:CDS 50.0%
GTGAGTCCGCGTAAAACAAG+AGG + chr5_1:20047644-20047663 None:intergenic 50.0%
GGAGCGAAAACTGGCATTGT+CGG - chr5_1:20047680-20047699 Msa0722660:CDS 50.0%
ACTGGCATTGTCGGAAGAAC+AGG - chr5_1:20047689-20047708 Msa0722660:CDS 50.0%
CATCTGTGTACTCTTCGAGC+GGG + chr5_1:20047892-20047911 None:intergenic 50.0%
!! AGAAGGAAAGCTTGACTCGG+CGG - chr5_1:20048051-20048070 Msa0722660:CDS 50.0%
GAGTATGGGGCAAAGACAGT+TGG - chr5_1:20048363-20048382 Msa0722660:CDS 50.0%
TACACAAGGAGGTCAAGCAC+TGG - chr5_1:20048744-20048763 Msa0722660:intron 50.0%
!!! AGGAGGTCAAGCACTGGTTT+TGG - chr5_1:20048750-20048769 Msa0722660:intron 50.0%
!! TTAGGGGCATGCATCGGTTC+AGG + chr5_1:20042561-20042580 None:intergenic 55.0%
CTTGCAGTGATGCCATGGGA+TGG + chr5_1:20043492-20043511 None:intergenic 55.0%
! GTAGTGGAGAAGCTTCCACG+AGG - chr5_1:20043928-20043947 Msa0722660:intron 55.0%
ACCTCCAGTTCCTTGGGGAA+GGG + chr5_1:20044652-20044671 None:intergenic 55.0%
AACCTCCAGTTCCTTGGGGA+AGG + chr5_1:20044653-20044672 None:intergenic 55.0%
GATTCCGCGGTTGCTGAAAC+AGG + chr5_1:20045649-20045668 None:intergenic 55.0%
CATATGCCAGCTGCCATGAC+AGG + chr5_1:20046369-20046388 None:intergenic 55.0%
CTGTCATGGCAGCTGGCATA+TGG - chr5_1:20046367-20046386 Msa0722660:intron 55.0%
!! GCGGGATTGGCTGTGACATA+CGG - chr5_1:20047073-20047092 Msa0722660:CDS 55.0%
!! CGGGATTGGCTGTGACATAC+GGG - chr5_1:20047074-20047093 Msa0722660:CDS 55.0%
!! GAAGGAAAGCTTGACTCGGC+GGG - chr5_1:20048052-20048071 Msa0722660:CDS 55.0%
ACCTCCCTTCCCCAAGGAAC+TGG - chr5_1:20044645-20044664 Msa0722660:intron 60.0%
TCCAGTTCCTTGGGGAAGGG+AGG + chr5_1:20044649-20044668 None:intergenic 60.0%
TCCCTTCCCCAAGGAACTGG+AGG - chr5_1:20044648-20044667 Msa0722660:intron 60.0%
GGCAGCTGGCATATGGTACC+AGG - chr5_1:20046374-20046393 Msa0722660:intron 60.0%
TGTACTCTTCGAGCGGGTCG+AGG + chr5_1:20047886-20047905 None:intergenic 60.0%
!! GGGGCATGCATCGGTTCAGG+TGG + chr5_1:20042558-20042577 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 20042240 20049046 20042240 ID=Msa0722660;Name=Msa0722660
chr5_1 mRNA 20042240 20049046 20042240 ID=Msa0722660-mRNA-1;Parent=Msa0722660;Name=Msa0722660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=324|1|1|1|0.9|0.81|11|267|1306
chr5_1 exon 20042240 20042619 20042240 ID=Msa0722660-mRNA-1:exon:7599;Parent=Msa0722660-mRNA-1
chr5_1 exon 20042706 20042945 20042706 ID=Msa0722660-mRNA-1:exon:7598;Parent=Msa0722660-mRNA-1
chr5_1 exon 20043213 20043276 20043213 ID=Msa0722660-mRNA-1:exon:7597;Parent=Msa0722660-mRNA-1
chr5_1 exon 20043361 20043666 20043361 ID=Msa0722660-mRNA-1:exon:7596;Parent=Msa0722660-mRNA-1
chr5_1 exon 20044004 20044218 20044004 ID=Msa0722660-mRNA-1:exon:7595;Parent=Msa0722660-mRNA-1
chr5_1 exon 20044305 20044599 20044305 ID=Msa0722660-mRNA-1:exon:7594;Parent=Msa0722660-mRNA-1
chr5_1 exon 20044891 20045055 20044891 ID=Msa0722660-mRNA-1:exon:7593;Parent=Msa0722660-mRNA-1
chr5_1 exon 20045416 20046066 20045416 ID=Msa0722660-mRNA-1:exon:7592;Parent=Msa0722660-mRNA-1
chr5_1 exon 20046168 20046254 20046168 ID=Msa0722660-mRNA-1:exon:7591;Parent=Msa0722660-mRNA-1
chr5_1 exon 20046822 20048644 20046822 ID=Msa0722660-mRNA-1:exon:7590;Parent=Msa0722660-mRNA-1
chr5_1 exon 20048761 20049046 20048761 ID=Msa0722660-mRNA-1:exon:7589;Parent=Msa0722660-mRNA-1
chr5_1 five_prime_UTR 20048761 20049046 20048761 ID=Msa0722660-mRNA-1:five_prime_utr;Parent=Msa0722660-mRNA-1
chr5_1 five_prime_UTR 20048607 20048644 20048607 ID=Msa0722660-mRNA-1:five_prime_utr;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20046822 20048606 20046822 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20046168 20046254 20046168 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20045416 20046066 20045416 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20044891 20045055 20044891 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20044305 20044599 20044305 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20044004 20044218 20044004 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20043361 20043666 20043361 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20043213 20043276 20043213 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20042706 20042945 20042706 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 CDS 20042507 20042619 20042507 ID=Msa0722660-mRNA-1:cds;Parent=Msa0722660-mRNA-1
chr5_1 three_prime_UTR 20042240 20042506 20042240 ID=Msa0722660-mRNA-1:three_prime_utr;Parent=Msa0722660-mRNA-1
Gene Sequence

>Msa0722660

ATGACTAAACTTGCCCCTCTTGAAGAGTCCCTTTTGAATGGTGAAGCTAGTGCAAGCAACAACAATTCTGATTTCAAAAAGACACTAAGAAATGAAATTTCAACCAGTTATTCAAATGCTGGATTTTTCAGCATTCTTACATTCTCATGGATGACTCCACTAATAGCTTTAGGCAATCAAAAGACTTTAGACCATGAAGACCTTCCATTGCTTTCTACCAATGACAGTGCCAATGGAACTTTTTCAACTTTTAGAAACAAGCTTGAGTTGGAGTGTGGTAATGTTAGGAATGTGACCACAATTAACCTTGCCAAGGTCTTGTTCTTCTCAACATGGCAAGGAATTCTTATATCTGGCTTGTTTGCGTTGTTGTACACATGTGCTTCTTATGTAGGACCATACCTAATAGAAAATCTTGTTCAATACCTCAATGATGAAAACAAGGTTAAAAATGAAGGCTATATTTTGGCTATGACGTTTGTTGCGGCAAAGCTTGTCGAGTGTCTTTCGCAGAAGCACTGGATGTTTAGGTTCCAACAGGTTGGTGTTAGGATGCAATCAATGTTGGTGTCAACGATATATGCTAAAGGTTTGACCCTTTCGTGTCAATCAAAAGTGGGATACAGCAGCGGTGAAATCATCAACTTAATGACCGTTGATGCTGAAAGGATAGGTGAATTTTGTTGGTGTATGCATGAACCATGGATGGCTGTTCTGCAAGTTTCTTTGGCTTTGTTTATACTTCATAGAAGTGTAGGGGCTGCTTCGGTAGCTGCTTTTGCCGCCACAGTAGTTGTGATGTTGCTAAACCATCCCATGGCATCACTGCAAGAGAAGTTTCAAGGTAAGTTAATGGAATTCAAAGATAAAAGAATGAAGGCGACGTCTGAGATTCTAATGAACATGAGGATTCTTAAACTTCAAGCATGGGAGTTGAAGTTCTTATCAAAGATTATTCTTCTTAGGAAGTTAGAGGAGATGTGGCTAAAGAAATTTCTTGGCTGTACAGCAATTGTTAGATTTCTCTTCTTCAATGCTCCGACGTTTATTGCTGTGGTAACTTTCGGTTCATGTGTTCTTCTAAGCATCCCACTTGAATCAGGAAAGATCTTATCCGCTCTTGCAACATTCAGACTTCTTCAAATGCCTGTCTACAATCTTCCAGATACAATTTCAATGATTGCACAAACCAAGGTTTCTCTAGTTAGGATTGTCGCATTTCTTCGCTTAGATGATTTGCAGGCCGATGTAGTGGAGAAGCTTCCACGAGGTAATTCTGATATAGCAATTGAAATAGTAGATGGGAATTGTTCTTGGGATTTATCATCTGCCAATACAACATTGAAAAACATAAATCTTAGAGTTTTTCATGGAATGAGGGTTGCTGTTTGTGGTACAGTTGGATCAGGCAAGTCGAGTTTAATTTCTTGTATAATTGGTGAAATACCGAAGATATCTGGGATCCTGAAGGTTTGTGGAACAAAGGCTTATGTTGCTCAATCGCCGTGGATACAAAGTGGCAAGATAGAAGAGAATATACTATTTGGTAGAGAGATGGATAGGGAAAAGTATGAGAAGGTTATAGAAGCCTGTTCATTGAAGAAAGACCTCGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATCGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTCGACGATCCCTTTAGTGCAGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGGCCTGTTGAAAACAAAAACAGTGATTTATATAACGCATCAAGTAGAGTTCTTACCTGATGCCGATCTGATACTTGTCATGAAAGAAGGAAGGATAACACAATCAGGAAAATACAATGACATTCTTACATCGGGAACAGATTTTATGGAACTTGTAGGCGCACATAGAGCAGCGTTGTCTTCAGTTAAGTCCTTAGAGAGAAGGAATACATTTAAAAAATCGAGTATTACCGAGGAAGACACAGTTTTATCAAGTGATTTTGAACTTGAGCAAGAAGTGCAAATCATAGATGATCAAAAAGGAAAGTTAGACGACACAGTGAAGCCAAAAGGACAACTTGTTCAAGACGAAGAACGAGAAAAGGGTAGAGTTGAGTTTAAAGTGTTCTGGAAATACATCACAACAGGTTATGGAGGAGCTCTGGTACCTATTATATTTCTTTCACAAATACTCACTGTGGTTTTACAGATTGCAAGCAATTATTGGATGGCTTTGGCAACTCCTGTTTCAGCAACCGCGGAATCTGATATTGGAAGCCTTACTCTTATGGTTGTCTACCTTTCTTTGGCAGTTGGAATTTCCTGTACCACCTTTGCTAGAGCAGTTCTTGTTGTAATAGCTGGATACAAAGCCTCCACAATGCTCTTCAATCAAATGCATTTGAGCTTTATTCGAGCACCAATGTCGTTTTTTGATGCCACACCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAACTGCAATAGATATGAGCGTTCCAAATGTAGCATGGGGATTTACCTACAGTCTTGTTCAGCTTTTGGGAACTGTTGCTGTGATGTCTCAAGTTGCATGGCAGGTGTCGATAGTATTGATTCCTGTCATGGCAGCTGGCATATGGTACCAGCGATACTACTCTTCATCAGCGCGTGAGTTATCACGATTAACTGGTATATGCCAAGCACCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACTATAAGAAGTTTTGAGCAAGAATCAAGATTTCATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAATTATACACTGCTAGTGTAGTGGAATGGCTGAGTTTCAGATTGGATCTTTTATCCTCTACACTATTTGCCTTCTACTTGGTTTTCCTGGTATCTTTTCCAAGTTCAATAGCTGATCCTAGTATTGCGGGATTGGCTGTGACATACGGGATTAACCTAAATGCTGTACAGTCGAACTTAATTTCATATCTTTGCAATTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCTATCCCAAGTGAAGCACCTCTTGTAATAAAAGACAGCCAACCAGATCATTCTTGGCCGTCATTTGGAGAGGTTTGTATTCAGGATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTTTTACGCGGACTCACTTGCACTTTTACTGCTGGAGCGAAAACTGGCATTGTCGGAAGAACAGGAAGTGGAAAAACAACTCTAGTGCAAGCACTTTTCAGACTTGTTGAACCTGTTGCAGGACAAATATTAATAGATAACATCAACATCTCATTGATTGGAATTCATGATTTGCGGTCCAAACTAAGCATAATCCCTCAGGATCCAACGATGTTTGAAGGGACTGTAAGAAGTAACCTCGACCCGCTCGAAGAGTACACAGATGACAAGATTTGGGAGGCTCTAGATATGTGTCAACTTGGTGATGAAGTGAGGAAGAAAGAAGGAAAGCTTGACTCGGCGGTTACTGAGAATGGAGAAAATTGGAGTATGGGGCAAAGACAGTTGGTATGCCTCGGACGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTCGATGAAGCAACTGCATCCGTTGATACAGCTACCGATAATATTATTCAGCAAACAGTTAAGCAACATTTCTCAGATTGCACAGTCATTACCATTGCTCATAGAATCACTTCAATCCTCGATAGCGACATGGTTTTGTTTCTCAGTGAAGGGATTATCGAGGAATATGATTCCCCAAAGAAGCTTCTTAAGGACAAATCGTCATCTCTTGCTCAACTAGTTGCAGAGTACACAAGGAGGTCAAGCACTGGTTTTGGAAGTTGA
Protein sequence

>Msa0722660

MTKLAPLEESLLNGEASASNNNSDFKKTLRNEISTSYSNAGFFSILTFSWMTPLIALGNQKTLDHEDLPLLSTNDSANGTFSTFRNKLELECGNVRNVTTINLAKVLFFSTWQGILISGLFALLYTCASYVGPYLIENLVQYLNDENKVKNEGYILAMTFVAAKLVECLSQKHWMFRFQQVGVRMQSMLVSTIYAKGLTLSCQSKVGYSSGEIINLMTVDAERIGEFCWCMHEPWMAVLQVSLALFILHRSVGAASVAAFAATVVVMLLNHPMASLQEKFQGKLMEFKDKRMKATSEILMNMRILKLQAWELKFLSKIILLRKLEEMWLKKFLGCTAIVRFLFFNAPTFIAVVTFGSCVLLSIPLESGKILSALATFRLLQMPVYNLPDTISMIAQTKVSLVRIVAFLRLDDLQADVVEKLPRGNSDIAIEIVDGNCSWDLSSANTTLKNINLRVFHGMRVAVCGTVGSGKSSLISCIIGEIPKISGILKVCGTKAYVAQSPWIQSGKIEENILFGREMDREKYEKVIEACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLKTKTVIYITHQVEFLPDADLILVMKEGRITQSGKYNDILTSGTDFMELVGAHRAALSSVKSLERRNTFKKSSITEEDTVLSSDFELEQEVQIIDDQKGKLDDTVKPKGQLVQDEEREKGRVEFKVFWKYITTGYGGALVPIIFLSQILTVVLQIASNYWMALATPVSATAESDIGSLTLMVVYLSLAVGISCTTFARAVLVVIAGYKASTMLFNQMHLSFIRAPMSFFDATPSGRILNRASTDQTAIDMSVPNVAWGFTYSLVQLLGTVAVMSQVAWQVSIVLIPVMAAGIWYQRYYSSSARELSRLTGICQAPVIQHFSETISGSTTIRSFEQESRFHEMNMQLIDKYSQPKLYTASVVEWLSFRLDLLSSTLFAFYLVFLVSFPSSIADPSIAGLAVTYGINLNAVQSNLISYLCNLENKIISVERILQYTSIPSEAPLVIKDSQPDHSWPSFGEVCIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKTTLVQALFRLVEPVAGQILIDNINISLIGIHDLRSKLSIIPQDPTMFEGTVRSNLDPLEEYTDDKIWEALDMCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQHFSDCTVITIAHRITSILDSDMVLFLSEGIIEEYDSPKKLLKDKSSSLAQLVAEYTRRSSTGFGS*